Running job 3 based on command line options. Read_Frags()-- from 10001 through 15000 Read_Frags()-- allocate 321 MB for bases, votes and info, for 5000 reads of total length 25962103 (13.0000 bytes/base) Read_Frags()-- from 10001 through 14999 -- loaded 25962103 bases in 5000 reads. Read_Olaps()-- loading 208820 overlaps. Extract_Needed_Frags()-- Loading used reads between 3 and 100002, at overlap 0. Extract_Needed_Frags()-- Loading reads for overlaps 0 to 41087 (reads 10477 bases 57626764) Extract_Needed_Frags()-- Loaded 10477 reads (10.4772%). Loaded IDs 3 through 99981. Extract_Needed_Frags()-- Loading used reads between 100017 and 200002, at overlap 41087. Extract_Needed_Frags()-- Loading reads for overlaps 41087 to 65316 (reads 6498 bases 33737410) Extract_Needed_Frags()-- Loaded 6498 reads (6.4981%). Loaded IDs 100017 through 199988. Extract_Needed_Frags()-- Loading used reads between 200046 and 300002, at overlap 65316. Extract_Needed_Frags()-- Loading reads for overlaps 65316 to 88115 (reads 6467 bases 33007118) Extract_Needed_Frags()-- Loaded 6467 reads (6.4671%). Loaded IDs 200046 through 299987. Extract_Needed_Frags()-- Loading used reads between 300005 and 400002, at overlap 88115. Extract_Needed_Frags()-- Loading reads for overlaps 88115 to 109450 (reads 6175 bases 31440829) Extract_Needed_Frags()-- Loaded 6175 reads (6.1751%). Loaded IDs 300005 through 400001. Extract_Needed_Frags()-- Loading used reads between 400027 and 500002, at overlap 109450. Extract_Needed_Frags()-- Loading reads for overlaps 109450 to 133311 (reads 6601 bases 35993107) Extract_Needed_Frags()-- Loaded 6601 reads (6.6011%). Loaded IDs 400027 through 500001. Extract_Needed_Frags()-- Loading used reads between 500009 and 600002, at overlap 133311. Extract_Needed_Frags()-- Loading reads for overlaps 133311 to 165293 (reads 7591 bases 42670184) Extract_Needed_Frags()-- Loaded 7591 reads (7.5912%). Loaded IDs 500009 through 599957. Extract_Needed_Frags()-- Loading used reads between 600019 and 700002, at overlap 165293. Extract_Needed_Frags()-- Loading reads for overlaps 165293 to 202558 (reads 7504 bases 40603446) Extract_Needed_Frags()-- Loaded 7504 reads (7.5042%). Loaded IDs 600019 through 699980. Extract_Needed_Frags()-- Loading used reads between 700053 and 723223, at overlap 202558. Extract_Needed_Frags()-- Loading reads for overlaps 202558 to 208820 (reads 1751 bases 9847714) Extract_Needed_Frags()-- Loaded 1751 reads (7.5412%). Loaded IDs 700053 through 723223. Passed overlaps = 203442 97.4246% Failed overlaps = 5378 2.5754% Bye.