optimize_initPlace()-- Failed to find overlaps for read 629016 in tig 738 at 26208-21181 (first pass) optimize_initPlace()-- Second pass begins. optimize_initPlace()-- olap 0 a 629016 b 22408 hangs 28 -3868 optimize_initPlace()-- olap 1 a 629016 b 27907 hangs -3099 -3846 optimize_initPlace()-- olap 2 a 629016 b 58199 hangs -2771 -3847 optimize_initPlace()-- olap 3 a 629016 b 84053 hangs 3306 5088 optimize_initPlace()-- olap 4 a 629016 b 84054 hangs 3281 5100 optimize_initPlace()-- olap 5 a 629016 b 84055 hangs 3288 5023 optimize_initPlace()-- olap 6 a 629016 b 84056 hangs 3726 5013 optimize_initPlace()-- olap 7 a 629016 b 100491 hangs 3411 -161 optimize_initPlace()-- olap 8 a 629016 b 117350 hangs 3339 -680 optimize_initPlace()-- olap 8 tig 738 read 629016 (at 26208 21181) olap to read 117350 (at 22874 21851) - hangs 3339 -680 - overlapping after optimize_initPlace()-- olap 9 a 629016 b 163124 hangs -2836 -2845 optimize_initPlace()-- olap 9 tig 738 read 629016 (at 26208 21181) olap to read 163124 (at 29044 24026) - hangs -2836 -2845 - overlapping after optimize_initPlace()-- olap 10 a 629016 b 176843 hangs -1996 -4182 optimize_initPlace()-- olap 11 a 629016 b 184125 hangs 3820 6713 optimize_initPlace()-- olap 12 a 629016 b 190265 hangs -2855 -3842 optimize_initPlace()-- olap 13 a 629016 b 190266 hangs -1798 -3869 optimize_initPlace()-- olap 14 a 629016 b 253444 hangs -2924 -3864 optimize_initPlace()-- olap 15 a 629016 b 265166 hangs 3296 -378 optimize_initPlace()-- olap 15 tig 738 read 629016 (at 26208 21181) olap to read 265166 (at 22917 21551) - hangs 3296 -378 - overlapping after optimize_initPlace()-- olap 16 a 629016 b 289164 hangs -2894 -3846 optimize_initPlace()-- olap 17 a 629016 b 312757 hangs 3297 -527 optimize_initPlace()-- olap 18 a 629016 b 321100 hangs -478 -3846 optimize_initPlace()-- olap 19 a 629016 b 335238 hangs -2925 -3847 optimize_initPlace()-- olap 20 a 629016 b 336452 hangs 72 6 optimize_initPlace()-- olap 21 a 629016 b 384813 hangs -1609 -226 optimize_initPlace()-- olap 21 tig 738 read 629016 (at 26208 21181) olap to read 384813 (at 21404 27818) - hangs -1609 -226 - overlapping after optimize_initPlace()-- olap 22 a 629016 b 385940 hangs 3827 4436 optimize_initPlace()-- olap 23 a 629016 b 407395 hangs -6235 -3857 optimize_initPlace()-- olap 24 a 629016 b 446597 hangs -4831 -3847 optimize_initPlace()-- olap 25 a 629016 b 515644 hangs -3660 -3862 optimize_initPlace()-- olap 26 a 629016 b 533751 hangs -19 6 optimize_initPlace()-- olap 27 a 629016 b 573730 hangs 3309 -544 optimize_initPlace()-- olap 28 a 629016 b 610480 hangs -5273 -3847 optimize_initPlace()-- olap 29 a 629016 b 610481 hangs -7488 -3847 optimize_initPlace()-- olap 30 a 629016 b 625813 hangs 3290 556 optimize_initPlace()-- olap 31 a 629016 b 629014 hangs 1778 -136 optimize_initPlace()-- olap 31 tig 738 read 629016 (at 26208 21181) olap to read 629014 (at 24431 21319) - hangs 1778 -136 - overlapping after optimize_initPlace()-- olap 32 a 629016 b 629015 hangs -968 0 optimize_initPlace()-- olap 32 tig 738 read 629016 (at 26208 21181) olap to read 629015 (at 21184 27184) - hangs -968 0 - overlapping after optimize_initPlace()-- olap 33 a 629016 b 629017 hangs -962 -144 optimize_initPlace()-- olap 33 tig 738 read 629016 (at 26208 21181) olap to read 629017 (at 21325 27179) - hangs -962 -144 - overlapping after optimize_initPlace()-- olap 34 a 629016 b 629018 hangs -973 -12 optimize_initPlace()-- olap 34 tig 738 read 629016 (at 26208 21181) olap to read 629018 (at 27188 21197) - hangs -973 -12 - overlapping after optimize_initPlace()-- olap 35 a 629016 b 629019 hangs -952 0 optimize_initPlace()-- olap 35 tig 738 read 629016 (at 26208 21181) olap to read 629019 (at 21184 27172) - hangs -952 0 - overlapping after optimize_initPlace()-- olap 36 a 629016 b 629020 hangs -982 0 optimize_initPlace()-- olap 36 tig 738 read 629016 (at 26208 21181) olap to read 629020 (at 27190 21185) - hangs -982 0 - overlapping after optimize_initPlace()-- olap 37 a 629016 b 629021 hangs 1821 -136 optimize_initPlace()-- olap 37 tig 738 read 629016 (at 26208 21181) olap to read 629021 (at 21320 24388) - hangs 1821 -136 - overlapping after optimize_initPlace()-- olap 38 a 629016 b 631815 hangs -2086 -3837 optimize_initPlace()-- olap 38 tig 738 read 629016 (at 26208 21181) olap to read 631815 (at 25025 28263) - hangs -2086 -3837 - overlapping after optimize_initPlace()-- olap 39 a 629016 b 657755 hangs 3290 -237 optimize_initPlace()-- olap 39 tig 738 read 629016 (at 26208 21181) olap to read 657755 (at 21410 22924) - hangs 3290 -237 - overlapping after optimize_initPlace()-- olap 40 a 629016 b 663277 hangs 3843 4761 optimize_initPlace()-- olap 41 a 629016 b 663278 hangs 3843 4774 optimize_initPlace()-- olap 42 a 629016 b 663279 hangs 3843 4752 optimize_initPlace()-- olap 43 a 629016 b 663280 hangs 3843 4779 optimize_initPlace()-- olap 44 a 629016 b 663281 hangs 3846 4767 optimize_initPlace()-- olap 45 a 629016 b 663282 hangs 3843 4748 optimize_initPlace()-- olap 46 a 629016 b 663283 hangs 4402 4781 optimize_initPlace()-- tig 738 read 629016 initialized to position 21167.38 26180.38 SECONDPASS optimize_initPlace()-- Failed to find overlaps for read 277065 in tig 1621 at 14798-24694 (first pass) optimize_initPlace()-- Second pass begins. optimize_initPlace()-- olap 0 a 277065 b 78325 hangs 7036 -86 optimize_initPlace()-- olap 0 tig 1621 read 277065 (at 14798 24694) olap to read 78325 (at 24607 21812) - hangs 7036 -86 - overlapping after optimize_initPlace()-- olap 1 a 277065 b 78326 hangs 7037 5363 optimize_initPlace()-- olap 1 tig 1621 read 277065 (at 14798 24694) olap to read 78326 (at 21814 30048) - hangs 7037 5363 - overlapping after optimize_initPlace()-- olap 2 a 277065 b 78327 hangs 7036 5359 optimize_initPlace()-- olap 2 tig 1621 read 277065 (at 14798 24694) olap to read 78327 (at 30053 21822) - hangs 7036 5359 - overlapping after optimize_initPlace()-- olap 3 a 277065 b 78328 hangs 7037 5360 optimize_initPlace()-- olap 3 tig 1621 read 277065 (at 14798 24694) olap to read 78328 (at 21813 30044) - hangs 7037 5360 - overlapping after optimize_initPlace()-- olap 4 a 277065 b 78329 hangs 7034 5358 optimize_initPlace()-- olap 4 tig 1621 read 277065 (at 14798 24694) olap to read 78329 (at 30047 21820) - hangs 7034 5358 - overlapping after optimize_initPlace()-- olap 5 a 277065 b 78330 hangs 7033 4895 optimize_initPlace()-- olap 5 tig 1621 read 277065 (at 14798 24694) olap to read 78330 (at 21819 29586) - hangs 7033 4895 - overlapping after optimize_initPlace()-- olap 6 a 277065 b 150940 hangs 3201 4258 optimize_initPlace()-- olap 6 tig 1621 read 277065 (at 14798 24694) olap to read 150940 (at 18007 28967) - hangs 3201 4258 - overlapping after optimize_initPlace()-- olap 7 a 277065 b 150941 hangs 2033 4351 optimize_initPlace()-- olap 7 tig 1621 read 277065 (at 14798 24694) olap to read 150941 (at 29055 16855) - hangs 2033 4351 - overlapping after optimize_initPlace()-- olap 8 a 277065 b 150942 hangs 1881 1777 optimize_initPlace()-- olap 8 tig 1621 read 277065 (at 14798 24694) olap to read 150942 (at 16761 26469) - hangs 1881 1777 - overlapping after optimize_initPlace()-- olap 9 a 277065 b 160678 hangs 6909 255 optimize_initPlace()-- olap 9 tig 1621 read 277065 (at 14798 24694) olap to read 160678 (at 24952 21689) - hangs 6909 255 - overlapping after optimize_initPlace()-- olap 10 a 277065 b 206165 hangs 6769 -467 optimize_initPlace()-- olap 10 tig 1621 read 277065 (at 14798 24694) olap to read 206165 (at 24227 21548) - hangs 6769 -467 - overlapping after optimize_initPlace()-- olap 11 a 277065 b 206166 hangs 6717 3774 optimize_initPlace()-- olap 11 tig 1621 read 277065 (at 14798 24694) olap to read 206166 (at 21499 28471) - hangs 6717 3774 - overlapping after optimize_initPlace()-- olap 12 a 277065 b 243699 hangs 5633 1197 optimize_initPlace()-- olap 12 tig 1621 read 277065 (at 14798 24694) olap to read 243699 (at 25886 20417) - hangs 5633 1197 - overlapping after optimize_initPlace()-- olap 13 a 277065 b 243700 hangs 5626 -1199 optimize_initPlace()-- olap 13 tig 1621 read 277065 (at 14798 24694) olap to read 243700 (at 20404 23494) - hangs 5626 -1199 - overlapping after optimize_initPlace()-- olap 14 a 277065 b 314140 hangs 7020 2474 optimize_initPlace()-- olap 14 tig 1621 read 277065 (at 14798 24694) olap to read 314140 (at 21797 27164) - hangs 7020 2474 - overlapping after optimize_initPlace()-- olap 15 a 277065 b 365335 hangs 8557 1913 optimize_initPlace()-- olap 15 tig 1621 read 277065 (at 14798 24694) olap to read 365335 (at 23334 26619) - hangs 8557 1913 - overlapping after optimize_initPlace()-- olap 16 a 277065 b 365336 hangs 5451 1908 optimize_initPlace()-- olap 16 tig 1621 read 277065 (at 14798 24694) olap to read 365336 (at 26611 20253) - hangs 5451 1908 - overlapping after optimize_initPlace()-- olap 17 a 277065 b 365337 hangs 5402 1945 optimize_initPlace()-- olap 17 tig 1621 read 277065 (at 14798 24694) olap to read 365337 (at 20183 26632) - hangs 5402 1945 - overlapping after optimize_initPlace()-- olap 18 a 277065 b 365338 hangs 7045 1468 optimize_initPlace()-- olap 18 tig 1621 read 277065 (at 14798 24694) olap to read 365338 (at 26164 21821) - hangs 7045 1468 - overlapping after optimize_initPlace()-- olap 19 a 277065 b 407706 hangs 8083 2292 optimize_initPlace()-- olap 19 tig 1621 read 277065 (at 14798 24694) olap to read 407706 (at 26976 22859) - hangs 8083 2292 - overlapping after optimize_initPlace()-- olap 20 a 277065 b 438329 hangs 433 -3455 optimize_initPlace()-- olap 20 tig 1621 read 277065 (at 14798 24694) olap to read 438329 (at 15310 21252) - hangs 433 -3455 - overlapping after optimize_initPlace()-- olap 21 a 277065 b 599355 hangs 4160 -1408 optimize_initPlace()-- olap 21 tig 1621 read 277065 (at 14798 24694) olap to read 599355 (at 18940 23288) - hangs 4160 -1408 - overlapping after optimize_initPlace()-- olap 22 a 277065 b 602005 hangs -15 -2888 optimize_initPlace()-- olap 22 tig 1621 read 277065 (at 14798 24694) olap to read 602005 (at 21809 14862) - hangs -15 -2888 - overlapping after optimize_initPlace()-- olap 23 a 277065 b 602006 hangs -16 -2918 optimize_initPlace()-- olap 23 tig 1621 read 277065 (at 14798 24694) olap to read 602006 (at 14862 21773) - hangs -16 -2918 - overlapping after optimize_initPlace()-- olap 24 a 277065 b 602007 hangs -15 -2883 optimize_initPlace()-- olap 24 tig 1621 read 277065 (at 14798 24694) olap to read 602007 (at 21808 14867) - hangs -15 -2883 - overlapping after optimize_initPlace()-- tig 1621 read 277065 initialized to position 14726.15 24617.15 SECONDPASS optimize_initPlace()-- Failed to find overlaps for read 89616 in tig 12573 at 4618-1868 (first pass) optimize_initPlace()-- Second pass begins. optimize_initPlace()-- olap 0 a 89616 b 168461 hangs -4037 -717 optimize_initPlace()-- olap 0 tig 12573 read 89616 (at 4618 1868) olap to read 168461 (at 8638 2574) - hangs -4037 -717 - overlapping after optimize_initPlace()-- olap 1 a 89616 b 428443 hangs -8304 -1624 optimize_initPlace()-- olap 1 tig 12573 read 89616 (at 4618 1868) olap to read 428443 (at 3457 12908) - hangs -8304 -1624 - overlapping after optimize_initPlace()-- olap 2 a 89616 b 545102 hangs -2142 0 optimize_initPlace()-- olap 2 tig 12573 read 89616 (at 4618 1868) olap to read 545102 (at 6767 1877) - hangs -2142 0 - overlapping after optimize_initPlace()-- olap 3 a 89616 b 545103 hangs -4121 0 optimize_initPlace()-- olap 3 tig 12573 read 89616 (at 4618 1868) olap to read 545103 (at 1890 8747) - hangs -4121 0 - overlapping after optimize_initPlace()-- olap 4 a 89616 b 545104 hangs -4119 -65 optimize_initPlace()-- olap 4 tig 12573 read 89616 (at 4618 1868) olap to read 545104 (at 8745 1946) - hangs -4119 -65 - overlapping after optimize_initPlace()-- tig 12573 read 89616 initialized to position 1868.49 4643.49 SECONDPASS optimize_initPlace()-- Failed to find overlaps for read 370174 in tig 16181 at 7573-11478 (first pass) optimize_initPlace()-- Second pass begins. optimize_initPlace()-- olap 0 a 370174 b 113024 hangs 0 7666 optimize_initPlace()-- olap 0 tig 16181 read 370174 (at 7573 11478) olap to read 113024 (at 19162 7579) - hangs 0 7666 - overlapping after optimize_initPlace()-- olap 1 a 370174 b 113025 hangs 1281 7733 optimize_initPlace()-- olap 1 tig 16181 read 370174 (at 7573 11478) olap to read 113025 (at 8848 19193) - hangs 1281 7733 - overlapping after optimize_initPlace()-- olap 2 a 370174 b 140545 hangs 3410 6887 optimize_initPlace()-- olap 2 tig 16181 read 370174 (at 7573 11478) olap to read 140545 (at 18375 10931) - hangs 3410 6887 - overlapping after optimize_initPlace()-- olap 3 a 370174 b 474050 hangs 1727 3564 optimize_initPlace()-- olap 3 tig 16181 read 370174 (at 7573 11478) olap to read 474050 (at 9280 15037) - hangs 1727 3564 - overlapping after optimize_initPlace()-- tig 16181 read 370174 initialized to position 7530.28 11470.28 SECONDPASS