Basic Statistics
Measure | Value |
---|---|
Filename | Geoduck-NMP-gDNA-8to10kb-5_S20_L005_R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 87562 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-151 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 12370 | 14.12713277449122 | No Hit |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 96 | 0.10963660035175075 | Illumina Single End PCR Primer 1 (100% over 50bp) |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCTGTCG | 35 | 0.008293179 | 137.24164 | 145 |
GTAGCCA | 35 | 0.0073763495 | 51.671753 | 2 |
TACTCGC | 35 | 0.0037012496 | 20.667597 | 70-74 |