FastQCFastQC Report
Thu 29 Mar 2018
Geoduck-NMP-gDNA-2to4kb-3_S10_L003_R1_001_val_1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameGeoduck-NMP-gDNA-2to4kb-3_S10_L003_R1_001_val_1.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences284280784
Sequences flagged as poor quality0
Sequence length20-151
%GC35

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCGGG115901.4770194E-96.530886145
CGGGGGG183055.820766E-115.4583297145
CCCGCGG134001.2222717E-65.1968303145
GAGCCCG222903.6379788E-125.161656145
Produced by FastQC (version 0.11.5)