Basic Statistics
Measure | Value |
---|---|
Filename | Geoduck-NMP-gDNA-2to4kb-4_S14_L004_R2_001_val_2.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 288008202 |
Sequences flagged as poor quality | 0 |
Sequence length | 20-151 |
%GC | 36 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGGGGGG | 339110 | 0.0 | 7.0765247 | 145 |
CGATGGG | 39410 | 0.0 | 6.8005586 | 145 |
CGGGGGG | 45660 | 0.0 | 6.7727184 | 145 |
GCGCGGG | 21920 | 0.0 | 6.5836263 | 145 |
CTCGTGG | 43715 | 0.0 | 6.508131 | 145 |
CCGCGGG | 20295 | 1.8189894E-12 | 6.5012755 | 145 |
GATCCGG | 34095 | 0.0 | 6.4094806 | 145 |
CGACAGG | 57950 | 0.0 | 6.332486 | 145 |
GAGAGGG | 103730 | 0.0 | 6.2804446 | 145 |
GCGGGGG | 57945 | 0.0 | 6.2618747 | 145 |
AGCCCGG | 38445 | 0.0 | 6.220507 | 145 |
CGAGGGG | 38585 | 0.0 | 6.0910754 | 145 |
CGAAGGG | 31930 | 0.0 | 6.069272 | 145 |
CGTAGGG | 31335 | 0.0 | 6.0529323 | 145 |
GTCCCTT | 164245 | 0.0 | 5.974787 | 145 |
GGCTCTT | 84910 | 0.0 | 5.972882 | 145 |
GAGGAGG | 93910 | 0.0 | 5.9712424 | 145 |
GTAGGGG | 111515 | 0.0 | 5.9529223 | 145 |
GCTAGGG | 47480 | 0.0 | 5.905217 | 145 |
GTGAGGG | 99645 | 0.0 | 5.8758473 | 145 |