Basic Statistics
Measure | Value |
---|---|
Filename | Geoduck-NMP-gDNA-2to4kb-6_S22_L006_R2_001_val_2.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 197552 |
Sequences flagged as poor quality | 0 |
Sequence length | 20-151 |
%GC | 35 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCTCTT | 60 | 0.0056849336 | 155.79066 | 145 |
CGTGGCG | 55 | 0.0013523084 | 39.385765 | 1 |
CGATGCA | 65 | 0.0030702404 | 33.326416 | 1 |
GTGTGCC | 70 | 0.0044463146 | 30.898952 | 2 |
CGTACCA | 90 | 4.143425E-4 | 30.086346 | 1 |
CGAATAC | 75 | 0.006183838 | 28.882895 | 1 |
CGTGACA | 140 | 0.0054260846 | 19.341225 | 1 |
CGTACAT | 175 | 8.9772575E-4 | 18.567574 | 1 |
CGTATTA | 205 | 0.0025896681 | 15.8503685 | 1 |
CGTATTT | 300 | 0.0021922544 | 12.636267 | 1 |
TATGCAT | 355 | 0.007809272 | 10.6596155 | 3 |
GTATTAA | 360 | 0.008646728 | 10.514226 | 2 |