Basic Statistics
Measure | Value |
---|---|
Filename | Geoduck-NMP-gDNA-3_S9_L003_R2_001_val_2.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 41197 |
Sequences flagged as poor quality | 0 |
Sequence length | 20-151 |
%GC | 32 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTAAGGG | 5 | 0.0075732023 | 1033.3658 | 145 |
CTTAGCG | 5 | 0.0075732023 | 1033.3658 | 145 |
CTAGTTT | 25 | 2.9706088E-4 | 413.34634 | 145 |
CGTGGAG | 15 | 0.0069624754 | 52.435646 | 135-139 |
TTGTGTG | 50 | 0.007862279 | 27.467098 | 115-119 |