Basic Statistics
Measure | Value |
---|---|
Filename | Geoduck-NMP-gDNA-5to7kb-3_S11_L003_R2_001_val_2.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 768362 |
Sequences flagged as poor quality | 0 |
Sequence length | 20-151 |
%GC | 36 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTGTGGG | 210 | 9.3038925E-6 | 107.66974 | 145 |
TGTCACG | 340 | 0.008481759 | 49.876423 | 145 |
CTGGTAT | 565 | 0.0012450777 | 40.01884 | 145 |
AGTTGTG | 615 | 0.0018886324 | 36.765274 | 145 |
CGTGCGA | 65 | 0.0033771833 | 32.69648 | 1 |
CGAGAGT | 150 | 3.6268725E-4 | 21.25271 | 1 |
CGTGAAT | 260 | 4.6717927E-5 | 16.34824 | 1 |
CGTGTCA | 305 | 1.8218052E-4 | 13.936203 | 1 |
CGTCTGT | 515 | 9.60372E-6 | 11.348535 | 1 |
CGTTCAA | 350 | 0.008027946 | 10.626355 | 1 |
CGAACAT | 360 | 0.00989178 | 10.331178 | 1 |
CGTGATT | 360 | 0.00989178 | 10.331178 | 1 |
CGTGTAA | 445 | 0.004313213 | 9.55178 | 1 |
CGTTATA | 590 | 4.6995422E-4 | 9.005386 | 1 |
TGTATGC | 885 | 5.722868E-7 | 9.005385 | 1 |
CGTTAAA | 680 | 2.0289602E-4 | 8.594846 | 1 |
GTATGCA | 850 | 2.7079895E-4 | 7.4950976 | 2 |
CATCTTC | 495 | 0.009589533 | 5.4625916 | 125-129 |