FastQCFastQC Report
Tue 3 Apr 2018
Geoduck-NMP-gDNA-5to7kb-5_S19_L005_R1_001_val_1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameGeoduck-NMP-gDNA-5to7kb-5_S19_L005_R1_001_val_1.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences235822630
Sequences flagged as poor quality0
Sequence length20-151
%GC36

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCG121157.7414006E-75.8501687145
GCTCCGG308850.05.682354145
CTTCGCG137652.3941357E-75.639286145
GCCCGGG180804.456524E-105.6000943145
GCCCCGG266800.05.439452145
CGGGGGG133954.9220635E-65.291138145
GCGGCTT229851.0913936E-115.2860403145
Produced by FastQC (version 0.11.5)