FastQCFastQC Report
Tue 3 Apr 2018
Geoduck-NMP-gDNA-5to7kb-8_S31_L008_R1_001_val_1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameGeoduck-NMP-gDNA-5to7kb-8_S31_L008_R1_001_val_1.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences259664
Sequences flagged as poor quality0
Sequence length20-151
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCCG350.0042529125171.88283145
CAGTCCG400.0063404874150.39748145
TACTAAT3550.002809173433.89239145
GAAAAAT7450.004196812420.18758145
GGGAATC600.005808745514.04560265-69
TTCTCTT3000.007041628510.81303140-144
Produced by FastQC (version 0.11.5)