Writing bisulfite genomes out into a single MFA (multi FastA) file Bisulfite Genome Indexer version v0.19.1 (last modified 26 April 2018) Step I - Prepare genome folders - completed Step II - Genome bisulfite conversions - completed Bismark Genome Preparation - Step III: Launching the Bowtie 2 indexer Preparing indexing of CT converted genome in /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/ Building a SMALL index Preparing indexing of GA converted genome in /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/ Building a SMALL index