Basic Statistics
Measure | Value |
---|---|
Filename | EPI-151_S2_L002_R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 29567647 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 31 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 177665 | 0.6008763565122379 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGC | 43043 | 0.14557465462165456 | Illumina Single End PCR Primer 1 (100% over 49bp) |
GGCTGGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG | 35878 | 0.12134208718062685 | Illumina Single End PCR Primer 1 (100% over 44bp) |
GGCCTGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG | 32943 | 0.11141569702857992 | Illumina Single End PCR Primer 1 (100% over 44bp) |