Basic Statistics
Measure | Value |
---|---|
Filename | EPI-230_S37_L004_R1_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 32435740 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 30 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATG | 176476 | 0.5440788463589855 | TruSeq Adapter, Index 12 (100% over 49bp) |
CAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTAT | 43990 | 0.13562200214948078 | TruSeq Adapter, Index 12 (100% over 48bp) |
CCCGCCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCT | 36210 | 0.11163611497687427 | TruSeq Adapter, Index 12 (100% over 43bp) |