Total number of alignments analysed in /home/sam/analyses/20180507_oly_methylseq_bismark/6_GCCAAT_L001_R1_001_trimmed_bismark_bt2.bam: 394874 Total number duplicated alignments removed: 12839 (3.25%) Duplicated alignments were found at: 8957 different position(s) Total count of deduplicated leftover sequences: 382035 (96.75% of total)