Total number of alignments analysed in /home/sam/analyses/20180507_oly_methylseq_bismark/zr1394_13_s456_trimmed_bismark_bt2.bam:	324641
Total number duplicated alignments removed:	17428 (5.37%)
Duplicated alignments were found at:	12024 different position(s)

Total count of deduplicated leftover sequences: 307213 (94.63% of total)