Total number of alignments analysed in /home/sam/analyses/20180507_oly_methylseq_bismark/zr1394_16_s456_trimmed_bismark_bt2.bam:	306132
Total number duplicated alignments removed:	17258 (5.64%)
Duplicated alignments were found at:	11600 different position(s)

Total count of deduplicated leftover sequences: 288874 (94.36% of total)