Total number of alignments analysed in /home/sam/analyses/20180507_oly_methylseq_bismark/zr1394_17_s456_trimmed_bismark_bt2.bam:	323587
Total number duplicated alignments removed:	18679 (5.77%)
Duplicated alignments were found at:	12798 different position(s)

Total count of deduplicated leftover sequences: 304908 (94.23% of total)