Total number of alignments analysed in /home/sam/analyses/20180507_oly_methylseq_bismark/zr1394_1_s456_trimmed_bismark_bt2.bam:	329419
Total number duplicated alignments removed:	11287 (3.43%)
Duplicated alignments were found at:	7962 different position(s)

Total count of deduplicated leftover sequences: 318132 (96.57% of total)