Total number of alignments analysed in /home/sam/analyses/20180507_oly_methylseq_bismark/zr1394_2_s456_trimmed_bismark_bt2.bam: 340656 Total number duplicated alignments removed: 10294 (3.02%) Duplicated alignments were found at: 7716 different position(s) Total count of deduplicated leftover sequences: 330362 (96.98% of total)