Total number of alignments analysed in /home/sam/analyses/20180507_oly_methylseq_bismark/zr1394_8_s456_trimmed_bismark_bt2.bam:	329450
Total number duplicated alignments removed:	11886 (3.61%)
Duplicated alignments were found at:	8635 different position(s)

Total count of deduplicated leftover sequences: 317564 (96.39% of total)