Total number of alignments analysed in /home/sam/analyses/20180507_oly_methylseq_bismark/zr1394_9_s456_trimmed_bismark_bt2.bam: 345938 Total number duplicated alignments removed: 9557 (2.76%) Duplicated alignments were found at: 7288 different position(s) Total count of deduplicated leftover sequences: 336381 (97.24% of total)