Total number of alignments analysed in 2_CGATGT_L001_R1_001_trimmed_bismark_bt2.bam: 4572578 Total number duplicated alignments removed: 553860 (12.11%) Duplicated alignments were found at: 345957 different position(s) Total count of deduplicated leftover sequences: 4018718 (87.89% of total)