8_ACTTGA_L001_R1_001_trimmed_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.1 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 4746031 lines in total Total number of methylation call strings processed: 4746031 Final Cytosine Methylation Report ================================= Total number of C's analysed: 26831960 Total methylated C's in CpG context: 930960 Total methylated C's in CHG context: 76720 Total methylated C's in CHH context: 1361218 Total C to T conversions in CpG context: 2680491 Total C to T conversions in CHG context: 4844288 Total C to T conversions in CHH context: 16938283 C methylated in CpG context: 25.8% C methylated in CHG context: 1.6% C methylated in CHH context: 7.4%