zr1394_8_s456_trimmed_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.1 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 8875401 lines in total Total number of methylation call strings processed: 8875401 Final Cytosine Methylation Report ================================= Total number of C's analysed: 53598027 Total methylated C's in CpG context: 6996767 Total methylated C's in CHG context: 247134 Total methylated C's in CHH context: 3143493 Total C to T conversions in CpG context: 1160532 Total C to T conversions in CHG context: 10373161 Total C to T conversions in CHH context: 31676940 C methylated in CpG context: 85.8% C methylated in CHG context: 2.3% C methylated in CHH context: 9.0%