# ContigOrdering file. This file represents a ContigOrdering object, which describes an ordering of contigs within a Proximo cluster. # See ContigOrdering.h for more documentation. # # Important numbers: # N_contigs 101 (Number of contigs in the input cluster) # N_contigs_used 101 (Number of contigs ordered by this ordering) # has_Q_scores 1 (Boolean: has orientation quality scores?) # has_gaps 0 (Boolean: have gap sizes between contigs been estimated?) # # Columns: #contig_ID(local) contig_name contig_rc orientation_Q_score gap_size_after_contig 94 519987 1 6176.32 . 92 519913 0 6923.96 . 87 518404 1 3480.3 . 84 518295 0 2356.32 . 12 685 0 70.85 . 75 517090 0 23.7765 . 1 354 1 2703.82 . 54 507341 0 57.7571 . 28 1110 0 278.448 . 33 1255 1 667.493 . 37 1293 0 43.9065 . 9 628 1 68.8504 . 79 517654 0 2111.25 . 88 518725 0 1428.97 . 76 517479 1 1961.22 . 80 517719 0 1876.69 . 13 734 0 6.01085 . 74 516691 0 1107.44 . 70 515948 1 1412.54 . 7 499 0 122.893 . 16 991 0 91.0913 . 14 884 1 84.5034 . 22 1015 0 344.72 . 51 503776 1 42.3759 . 63 510879 0 68.9172 . 48 446279 0 52.0555 . 4 465 0 227.105 . 100 1022745 1 46.6786 . 97 930830 1 52.2274 . 98 930831 1 70.2981 . 99 1022744 1 58.089 . 52 505582 1 77.6264 . 71 516112 0 55.7524 . 96 520150 0 57.4672 . 40 1358 1 335.532 . 86 518398 0 60.9979 . 38 1314 1 145.367 . 56 507812 0 357.115 . 60 509272 1 312.616 . 3 457 0 19.7953 . 8 600 1 113.794 . 65 511291 1 78.8186 . 43 1605 0 447.621 . 44 1621 0 104.063 . 46 1671 1 154.061 . 19 1003 1 395.098 . 34 1276 1 270 . 2 413 1 21.8784 . 6 497 0 6.12214 . 59 509042 1 0.406501 . 66 512911 0 1.15971 . 53 506425 1 32.2626 . 82 517907 1 26.1453 . 41 1364 0 43.0888 . 5 475 0 1085.76 . 45 1647 0 392.283 . 57 507974 1 35.5168 . 26 1086 0 136.124 . 17 996 0 26.7368 . 73 516652 1 1396.61 . 72 516247 0 1149.52 . 0 351 0 669.756 . 49 498450 0 72.3555 . 83 518127 1 73.5867 . 69 513538 1 112.677 . 77 517526 0 161.499 . 55 507418 0 11.7265 . 50 502966 0 42.6589 . 62 510598 0 46.2141 . 85 518310 1 3297.13 . 89 518805 0 3547.98 . 11 682 1 6.85511 . 23 1067 0 98.3764 . 42 1462 1 503.296 . 35 1284 0 29.4449 . 64 510881 1 194.645 . 67 512994 0 262.898 . 90 518916 0 1783.22 . 78 517595 1 1698.1 . 15 968 0 1834.64 . 47 1707 0 432.426 . 25 1082 1 698.742 . 10 651 0 499.219 . 30 1205 0 1362.01 . 39 1333 1 1151.04 . 20 1007 0 0.225546 . 36 1286 1 3.33298 . 32 1232 1 71.8832 . 81 517798 1 90.0683 . 58 507981 0 58.3427 . 95 520080 0 221.765 . 61 510277 0 92.7124 . 68 513282 1 150.459 . 24 1068 1 859.978 . 18 997 0 2471.9 . 31 1227 0 91.1066 . 29 1116 0 13.9472 . 27 1087 1 178.383 . 21 1009 1 223.577 . 91 519837 0 7814.89 . 93 519934 1 8601.32 .