Total number of alignments analysed in 2_CGATGT_L001_R1_001_trimmed_bismark_bt2.bam: 5113960 Total number duplicated alignments removed: 671077 (13.12%) Duplicated alignments were found at: 402031 different position(s) Total count of deduplicated leftover sequences: 4442883 (86.88% of total)