3_TTAGGC_L001_R1_001_trimmed_bismark_bt2.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.19.0
Bismark result file: single-end (SAM format)
Output specified: strand-specific (default)


Processed 5234393 lines in total
Total number of methylation call strings processed: 5234393

Final Cytosine Methylation Report
=================================
Total number of C's analysed:	40389791

Total methylated C's in CpG context:	1578160
Total methylated C's in CHG context:	96667
Total methylated C's in CHH context:	1114187

Total C to T conversions in CpG context:	4204481
Total C to T conversions in CHG context:	7678499
Total C to T conversions in CHH context:	25717797

C methylated in CpG context:	27.3%
C methylated in CHG context:	1.2%
C methylated in CHH context:	4.2%