5_ACAGTG_L001_R1_001_trimmed_bismark_bt2.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.19.0
Bismark result file: single-end (SAM format)
Output specified: strand-specific (default)


Processed 5536881 lines in total
Total number of methylation call strings processed: 5536881

Final Cytosine Methylation Report
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Total number of C's analysed:	42722256

Total methylated C's in CpG context:	1637553
Total methylated C's in CHG context:	120623
Total methylated C's in CHH context:	1293128

Total C to T conversions in CpG context:	4495929
Total C to T conversions in CHG context:	8119549
Total C to T conversions in CHH context:	27055474

C methylated in CpG context:	26.7%
C methylated in CHG context:	1.5%
C methylated in CHH context:	4.6%