6_GCCAAT_L001_R1_001_trimmed_bismark_bt2.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.19.0
Bismark result file: single-end (SAM format)
Output specified: strand-specific (default)


Processed 5480323 lines in total
Total number of methylation call strings processed: 5480323

Final Cytosine Methylation Report
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Total number of C's analysed:	42224295

Total methylated C's in CpG context:	1571670
Total methylated C's in CHG context:	146137
Total methylated C's in CHH context:	1398040

Total C to T conversions in CpG context:	4477560
Total C to T conversions in CHG context:	7960792
Total C to T conversions in CHH context:	26670096

C methylated in CpG context:	26.0%
C methylated in CHG context:	1.8%
C methylated in CHH context:	5.0%