Flowcell: HCTVKBCXX

Barcode lane statistics

Lane Sample ID Sample Ref Index Description Control Project Yield (Mbases) % PF # Reads % of raw clusters per lane % Perfect Index Reads % One Mismatch Reads (Index) % of >= Q30 Bases (PF) Mean Quality Score (PF)
1 HC1-1 NA TTAGGC-TCATG N UofWashington 98 100.00 1,914,464 1.13 70.42 29.38 90.77 37.04
1 HC2-18 NA ATCACG-GACGT N UofWashington 127 100.00 2,484,661 1.46 70.48 29.29 90.93 37.10
1 HC2-20 NA ACAGTG-GACGT N UofWashington 121 100.00 2,378,462 1.40 70.49 29.32 90.89 37.09
1 HC3-8 NA TAGCTT-TCATG N UofWashington 133 100.00 2,604,877 1.53 70.54 29.27 90.92 37.10
1 NF1-2 NA TGACCA-TCATG N UofWashington 105 100.00 2,051,899 1.21 70.41 29.38 91.00 37.12
1 NF2-11-SS NA CTTGTA-GACGT N UofWashington 124 100.00 2,438,411 1.43 70.43 29.40 90.91 37.10
1 NF2-13 NA TGACCA-GACGT N UofWashington 165 100.00 3,227,234 1.90 70.41 29.37 90.90 37.09
1 NF2-15 NA GGCTAC-GACGT N UofWashington 191 100.00 3,740,568 2.20 70.60 29.22 90.83 37.07
1 NF2-16 NA CGATGT-GACGT N UofWashington 37 100.00 731,015 0.43 70.48 29.32 90.91 37.10
1 NF2-3 NA GCCAAT-GACGT N UofWashington 108 100.00 2,125,928 1.25 70.45 29.34 90.98 37.11
1 SS1-11 NA GGCTAC-TCATG N UofWashington 0 100.00 6,255 0.00 32.87 63.28 84.91 35.87
1 SS1-12 NA ATCACG-TCATG N UofWashington 123 100.00 2,405,751 1.41 70.53 29.25 90.94 37.10
1 SS1-13 NA TAGCTT-GACGT N UofWashington 61 100.00 1,205,793 0.71 70.18 29.59 90.84 37.08
1 SS1-14 NA GATCAG-TCATG N UofWashington 106 100.00 2,069,770 1.22 70.62 29.19 91.02 37.12
1 SS1-16 NA CAGATC-TCATG N UofWashington 49 100.00 962,247 0.57 70.59 29.21 90.96 37.10
1 SS1-18 NA TTAGGC-GACGT N UofWashington 66 100.00 1,285,544 0.76 70.37 29.40 90.67 37.01
1 SS2-1 NA ACAGTG-TCATG N UofWashington 97 100.00 1,906,708 1.12 70.54 29.28 91.06 37.13
1 SS2-2 NA GATCAG-GACGT N UofWashington 53 100.00 1,031,239 0.61 70.31 29.46 91.02 37.12
1 lane1 unknown Undetermined Clusters with unmatched barcodes for lane 1 N Undetermined_indices 6,915 100.00 135,581,455 79.68 0.00 0.00 90.81 37.07
2 HC1-12 NA TAGCTT-GACGT N UofWashington 93 100.00 1,817,265 0.90 98.17 1.77 97.36 38.43
2 HC2-10 NA CTTGTA-GACGT N UofWashington 146 100.00 2,869,998 1.42 98.61 1.35 97.43 38.45
2 HC2-7 NA TTAGGC-TCATG N UofWashington 272 100.00 5,333,407 2.64 98.55 1.42 97.26 38.39
2 HC2-8 NA GGCTAC-TCATG N UofWashington 56 100.00 1,091,951 0.54 98.11 1.83 97.38 38.43
2 HC4-4A NA TGACCA-TCATG N UofWashington 161 100.00 3,166,571 1.57 98.35 1.61 97.44 38.45
2 HC4-4B NA CGATGT-TCATG N UofWashington 123 100.00 2,410,343 1.20 98.34 1.61 97.53 38.48
2 NF1-11 NA GCCAAT-GACGT N UofWashington 106 100.00 2,084,135 1.03 98.11 1.83 97.36 38.43
2 NF1-12 NA ACTTGA-TCATG N UofWashington 118 100.00 2,308,509 1.14 98.35 1.60 97.49 38.47
2 NF1-15 NA CAGATC-TCATG N UofWashington 101 100.00 1,972,515 0.98 98.45 1.51 97.47 38.46
2 NF2-6B NA GATCAG-GACGT N UofWashington 64 100.00 1,249,008 0.62 98.22 1.72 97.42 38.45
2 NF3-11 NA CTTGTA-TCATG N UofWashington 102 100.00 1,997,512 0.99 98.14 1.82 97.53 38.48
2 NF3-5 NA CGATGT-GACGT N UofWashington 77 100.00 1,510,251 0.75 98.13 1.80 97.45 38.46
2 SS2-15 NA TTAGGC-GACGT N UofWashington 142 100.00 2,793,899 1.39 98.35 1.60 97.16 38.36
2 SS2-19 NA GATCAG-TCATG N UofWashington 137 100.00 2,682,324 1.33 98.49 1.48 97.48 38.46
2 SS3-10 NA TAGCTT-TCATG N UofWashington 131 100.00 2,568,981 1.27 98.27 1.68 97.39 38.44
2 SS3-13 NA TGACCA-GACGT N UofWashington 108 100.00 2,116,025 1.05 97.87 2.06 97.31 38.41
2 SS3-14 NA GGCTAC-GACGT N UofWashington 136 100.00 2,661,152 1.32 98.13 1.81 97.29 38.41
2 SS3-17 NA ACAGTG-GACGT N UofWashington 101 100.00 1,978,225 0.98 97.99 1.94 97.36 38.43
2 SS3-19 NA ATCACG-GACGT N UofWashington 132 100.00 2,589,692 1.28 98.37 1.60 97.48 38.46
2 lane2 unknown Undetermined Clusters with unmatched barcodes for lane 2 N Undetermined_indices 7,979 100.00 156,456,924 77.59 0.00 0.00 97.35 38.42

Sample information

Sample

ID		 Recipe Operator Directory
HC1-1 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_HC1-1
HC2-18 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_HC2-18
HC2-20 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_HC2-20
HC3-8 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_HC3-8
NF1-2 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_NF1-2
NF2-11-SS /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_NF2-11-SS
NF2-13 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_NF2-13
NF2-15 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_NF2-15
NF2-16 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_NF2-16
NF2-3 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_NF2-3
SS1-11 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS1-11
SS1-12 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS1-12
SS1-13 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS1-13
SS1-14 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS1-14
SS1-16 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS1-16
SS1-18 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS1-18
SS2-1 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS2-1
SS2-2 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS2-2
lane1 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Undetermined_indices/Sample_lane1
HC1-12 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_HC1-12
HC2-10 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_HC2-10
HC2-7 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_HC2-7
HC2-8 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_HC2-8
HC4-4A /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_HC4-4A
HC4-4B /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_HC4-4B
NF1-11 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_NF1-11
NF1-12 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_NF1-12
NF1-15 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_NF1-15
NF2-6B /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_NF2-6B
NF3-11 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_NF3-11
NF3-5 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_NF3-5
SS2-15 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS2-15
SS2-19 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS2-19
SS3-10 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS3-10
SS3-13 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS3-13
SS3-14 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS3-14
SS3-17 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS3-17
SS3-19 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Project_UofWashington/Sample_SS3-19
lane2 /ngs-seqdata/HiSeq/151217_SN1123_0455_AHCTVKBCXX/UnalignedDual5/Undetermined_indices/Sample_lane2

bcl2fastq-1.8.4