All statistics are based on contigs of size >= 500 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs). Suggestion: assemblies supernova_pseudohap_duck4-p, 20180421_Hi-C contain continuous fragments of N's of length >= 10 bp. You may consider rerunning QUAST using --scaffolds (-s) option! Assembly 20180405_sparse_kmer101 supernova_pseudohap_duck4-p 20180421_Hi-C # contigs (>= 0 bp) 24683708 315013 313624 # contigs (>= 1000 bp) 383849 315013 313624 # contigs (>= 5000 bp) 18465 50433 49052 # contigs (>= 10000 bp) 3320 15361 13989 # contigs (>= 25000 bp) 139 3350 2002 # contigs (>= 50000 bp) 4 1541 225 Total length (>= 0 bp) 4517188232 2205550088 2205690788 Total length (>= 1000 bp) 789016315 2205550088 2205690788 Total length (>= 5000 bp) 148019238 1634904607 1635063665 Total length (>= 10000 bp) 47110700 1397407710 1397630676 Total length (>= 25000 bp) 4342838 1225188922 1225799503 Total length (>= 50000 bp) 222433 1164206709 1166189936 # contigs 1158269 315013 313624 Largest contig 65191 13378076 95480635 Total length 1315630106 2205550088 2205690788 GC (%) 33.99 33.92 33.92 N50 1241 177022 43382739 N75 750 4745 4746 L50 265572 834 18 L75 613735 54388 52996 # N's per 100 kbp 0.00 9137.01 9142.81