All statistics are based on contigs of size >= 500 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs). Suggestion: all assemblies contain continuous fragments of N's of length >= 10 bp. You may consider rerunning QUAST using --scaffolds (-s) option! Assembly PGA_assembly_10k_plus PGA_assembly_30k_plus # contigs (>= 0 bp) 13989 1324 # contigs (>= 1000 bp) 13989 1324 # contigs (>= 5000 bp) 13989 1324 # contigs (>= 10000 bp) 13989 1324 # contigs (>= 25000 bp) 2002 1324 # contigs (>= 50000 bp) 225 225 Total length (>= 0 bp) 1397630676 1207376365 Total length (>= 1000 bp) 1397630676 1207376365 Total length (>= 5000 bp) 1397630676 1207376365 Total length (>= 10000 bp) 1397630676 1207376365 Total length (>= 25000 bp) 1225799503 1207376365 Total length (>= 50000 bp) 1166189936 1166189936 # contigs 13989 1324 Largest contig 95480635 95480635 Total length 1397630676 1207376365 GC (%) 33.75 33.76 N50 61394763 61730664 N75 48208840 50044066 L50 10 8 L75 16 13 # N's per 100 kbp 14282.99 16373.01