##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename olyo-rad-01.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 222197679 Filtered Sequences 0 Sequence length 101 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.580181001800653 31.0 31.0 34.0 27.0 34.0 2 30.705166456756732 31.0 31.0 34.0 27.0 34.0 3 30.772638718696967 31.0 31.0 34.0 27.0 34.0 4 34.1247917895668 37.0 35.0 37.0 30.0 37.0 5 34.11300456923315 37.0 35.0 37.0 30.0 37.0 6 33.76274678368715 37.0 35.0 37.0 29.0 37.0 7 33.64343688756533 37.0 35.0 37.0 28.0 37.0 8 33.5780847737838 37.0 35.0 37.0 28.0 37.0 9 34.97812912798248 39.0 35.0 39.0 28.0 39.0 10-14 35.07867676601608 39.2 35.2 39.4 27.0 39.4 15-19 35.871221137282895 40.0 36.0 41.0 27.0 41.0 20-24 35.759425217038384 40.0 36.0 41.0 27.0 41.0 25-29 35.55539643958207 40.0 35.8 41.0 25.4 41.0 30-34 35.2958473378113 40.0 35.0 41.0 24.4 41.0 35-39 35.05504315461369 40.0 35.0 41.0 23.8 41.0 40-44 34.751167501619136 39.0 34.6 41.0 22.2 41.0 45-49 34.39713553263533 39.0 34.0 41.0 19.2 41.0 50-54 33.98927795190876 39.0 33.4 41.0 15.8 41.0 55-59 33.474318550375145 38.0 33.0 40.4 10.4 41.0 60-64 32.8165071787271 37.2 32.2 40.0 6.0 41.0 65-69 32.032467799089844 36.2 31.4 39.4 2.0 41.0 70-74 31.159126722471296 35.0 31.0 38.4 2.0 40.4 75-79 29.187041023052274 33.8 28.6 35.8 2.0 38.6 80-84 29.56691672553429 35.0 30.0 36.0 2.0 37.6 85-89 28.928390666943017 34.4 29.4 35.0 2.0 36.4 90-94 28.351194492900174 34.0 29.0 35.0 2.0 36.0 95-99 27.74624219184576 34.0 29.0 35.0 2.0 35.2 100-101 26.246145030614834 33.0 24.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 5840345.0 3 2326326.0 4 1103894.0 5 873754.0 6 1031037.0 7 778444.0 8 719056.0 9 824588.0 10 956399.0 11 961218.0 12 1005172.0 13 1077473.0 14 1140190.0 15 1189535.0 16 1239236.0 17 1270905.0 18 1214065.0 19 1182614.0 20 1171383.0 21 1201544.0 22 1297845.0 23 1464597.0 24 1713619.0 25 2045575.0 26 2450504.0 27 2921516.0 28 3383033.0 29 3971324.0 30 4689638.0 31 5594945.0 32 6793338.0 33 8430467.0 34 1.0909816E7 35 1.4712478E7 36 2.2469336E7 37 3.8958538E7 38 4.8636557E7 39 1.4616011E7 40 31364.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 30.326114762393715 16.670684733974266 18.140019988696043 34.86318051493598 2 23.740551519412968 26.730897915332513 22.351814924413393 27.176735640841127 3 21.586268733854595 25.92072285254997 22.887360729060653 29.60564768453478 4 21.280083747100317 26.029805265766097 24.268337095725638 28.42177389140795 5 22.063096174114822 30.423176210900454 24.93543185214181 22.57829576284291 6 21.949343377191006 29.90075925707612 22.419364064116323 25.730533301616553 7 21.583557978560837 26.281033431231887 32.43754457675656 19.69786401345072 8 30.428572186198267 25.745789822553334 23.36391385840553 20.461724132842868 9 19.92054970034145 24.914568987060978 23.300765304968387 31.864116007629185 10-14 22.59462158431078 31.619114598990038 25.368197334743943 20.41806648195524 15-19 19.6430403335057 30.98143367570559 29.47697238188402 19.89855360890469 20-24 19.5396248494638 30.600493536170898 30.02423141773872 19.835650196626588 25-29 19.204976289220916 30.166933152888824 30.7858222967842 19.842268261106064 30-34 19.342093177120002 30.401227961753918 30.181682395725385 20.074996465400694 35-39 19.305485786116357 30.359733880387534 30.23825440838539 20.096525925110715 40-44 19.57205330355669 30.10115027431818 30.29269293487734 20.034103487247794 45-49 19.37196995782113 29.891854072866437 30.51977800896558 20.21639796034686 50-54 19.304744736801567 30.3630427671573 30.27472499341871 20.057487502622422 55-59 19.367620410349176 29.85022254425876 30.594822559992323 20.18733448539974 60-64 19.422858127182543 30.221933721023063 30.521535033362373 19.833673118432017 65-69 19.474402135181553 30.202394412232366 30.339671261901636 19.98353219068445 70-74 19.164950070817998 30.349430060817127 30.519054620552353 19.966565247812515 75-79 19.42070500381538 29.985642188288793 30.388330979468726 20.205321828427095 80-84 19.519418770266608 30.08522201128283 30.40643694930284 19.988922269147725 85-89 19.52852739892402 30.21435850386108 30.423995164105815 19.83311893310908 90-94 19.699355292983718 30.408624718564862 30.106307749284028 19.785712239167392 95-99 19.314513339704302 30.739323810078425 30.136563735040472 19.809599115176805 100-101 19.632764687200446 30.157943160742747 30.609044047404616 19.6002481046522 >>END_MODULE >>Per base GC content fail #Base %GC 1 65.18929527732969 2 50.91728716025409 3 51.19191641838938 4 49.701857638508265 5 44.64139193695773 6 47.67987667880756 7 41.28142199201155 8 50.89029631904114 9 51.78466570797063 10-14 43.01268806626602 15-19 39.541593942410394 20-24 39.37527504609039 25-29 39.04724455032698 30-34 39.4170896425207 35-39 39.402011711227075 40-44 39.606156790804484 45-49 39.58836791816799 50-54 39.36223223942399 55-59 39.55495489574892 60-64 39.25653124561456 65-69 39.457934325866 70-74 39.13151531863052 75-79 39.62602683224248 80-84 39.50834103941433 85-89 39.361646332033104 90-94 39.485067532151106 95-99 39.12411245488111 100-101 39.233012791852644 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1755.0 1 6484.5 2 18253.5 3 27588.0 4 26697.0 5 19909.5 6 14890.0 7 13406.0 8 14078.5 9 15763.5 10 18293.5 11 22077.5 12 27097.5 13 33599.5 14 41317.0 15 51065.5 16 63362.0 17 79671.5 18 105351.0 19 144834.0 20 207058.5 21 302738.0 22 442991.5 23 643310.5 24 913232.0 25 1264493.0 26 1716650.0 27 2269908.5 28 2929706.5 29 3711914.5 30 4602909.5 31 5596039.5 32 6690188.0 33 7835883.0 34 8935641.5 35 9812441.5 36 1.0359779E7 37 1.0705082E7 38 1.09138785E7 39 1.09084055E7 40 1.0747606E7 41 1.05129155E7 42 1.01753995E7 43 9691873.0 44 9132633.5 45 8534860.5 46 7880036.5 47 7240748.0 48 6617639.0 49 6000003.5 50 5388924.0 51 4764826.0 52 4122894.0 53 3521791.5 54 3003779.5 55 2542358.0 56 2136703.0 57 1789100.5 58 1477320.5 59 1190224.5 60 936851.5 61 711034.5 62 522492.5 63 390803.0 64 308684.5 65 255468.5 66 214079.0 67 175557.0 68 143527.0 69 116890.5 70 94093.5 71 73784.5 72 57541.0 73 44150.0 74 32662.5 75 25454.0 76 19783.0 77 15258.0 78 12516.5 79 10441.5 80 8756.5 81 7578.0 82 6555.5 83 5601.0 84 4914.0 85 4319.5 86 3718.5 87 3140.5 88 2727.5 89 2340.0 90 1891.5 91 1567.5 92 1303.5 93 1025.5 94 810.5 95 655.0 96 480.5 97 331.0 98 211.5 99 105.0 100 51.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15179456487482032 2 0.03008942321130186 3 0.004780878021682666 4 0.009948798790107974 5 0.02939724676422025 6 0.1900712923288456 7 0.21115252063456524 8 0.2037064482568245 9 0.21940013153782761 10-14 0.1963734283651091 15-19 0.21470350282101733 20-24 0.30799169598886766 25-29 0.30289722333238234 30-34 0.32592662680333395 35-39 0.3427502948849434 40-44 0.3518172662820659 45-49 0.2906477704476832 50-54 0.19366250895897072 55-59 0.18998992334208856 60-64 0.20873476360659915 65-69 0.22259539443704088 70-74 0.22436471984930137 75-79 0.2166096433437543 80-84 0.21491772648084229 85-89 0.22481233928640632 90-94 0.22197369577384288 95-99 0.2901546959903213 100-101 0.34406637523878003 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2.22197679E8 >>END_MODULE >>Sequence Duplication Levels warn #Total Duplicate Percentage 46.473620494396066 #Duplication Level Relative count 1 100.0 2 28.56400248057491 3 9.634115200817131 4 4.303615073140481 5 2.5307335935505053 6 1.807536570240397 7 1.4609856637361835 8 1.2147521249042426 9 1.1153467333017182 10++ 31.764126509320395 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content fail #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position GGGGG 34569675 5.0768166 12.961188 1 CCCCC 35530795 4.4639106 17.183435 2 GCAGG 32718125 3.1033363 159.08586 8 TGCAG 38117465 2.447543 111.360596 7 CAGGG 22268760 2.112207 34.152065 9 GGGGC 14626665 2.0820174 5.879652 1 CACAC 33357745 1.9807256 5.125629 1 GCCCC 14374595 1.8632162 5.0248523 1 CCCCT 21167335 1.8573754 8.354749 3 GGTCA 28667155 1.8407334 5.6018405 1 CCCTG 19453380 1.7611071 7.595264 4 CCCCA 20297580 1.7531271 6.2006283 1 GGCCC 13095770 1.751281 5.704191 1 CTGCA 27744475 1.726735 41.114086 6 ACCCC 19974285 1.7252035 8.461804 1 CAGGT 25880725 1.6618152 34.99436 9 CAGGA 25878265 1.6355997 30.622873 9 CACTG 26038325 1.6205492 6.2747746 4 CCTGC 16402320 1.4848956 12.943062 5 TGCTG 22718410 1.4820015 6.0660205 4 ATGCA 34625415 1.4815037 22.054665 6 CCATG 23487400 1.4617871 7.338468 2 CCCTA 23969420 1.4459379 5.5938563 1 CTGTG 22006005 1.4355289 5.097043 4 GTCTG 21998790 1.4350582 7.9052124 4 CCCCG 10827840 1.4034905 5.182749 1 TTGCA 32179075 1.398768 17.651691 6 GTGCA 21726885 1.395095 30.79665 6 GGCCA 15136145 1.3915495 5.558931 1 CCCGG 10058680 1.3451347 5.437222 1 CAGGC 14399365 1.3238131 32.954582 9 TTTGC 29311920 1.2944367 5.3417864 5 TGCAT 29432205 1.2793664 5.3541336 7 ATGTG 28444080 1.2756195 5.478102 4 TCTGC 20164275 1.274959 10.663267 5 CATGC 20016835 1.2457892 8.746203 5 TGTGC 18650220 1.2166191 15.98745 5 TGCAC 18687900 1.1630803 6.6805854 7 GCTGC 12307735 1.1495447 12.836295 5 GGTGC 11891810 1.1459161 10.005082 5 ACTGC 18375520 1.1436385 16.886597 5 AATGC 25906930 1.1084694 8.793271 5 CGGAC 11713275 1.0768661 5.922155 2 GATGC 16415800 1.0540673 9.657923 5 CATAC 24707860 1.0246739 5.5346513 2 GTTGC 15447485 1.0076935 5.2108016 5 ATTGC 22960085 0.9980347 8.799217 5 CCGAG 10690375 0.9828253 5.49701 1 CGCCA 10791750 0.96165234 5.521156 2 GCTCA 15374500 0.9568639 5.190286 1 CGTGC 9254385 0.8643612 7.8801403 5 AGTGC 13155880 0.84474605 6.127049 5 CGCTG 8971935 0.83798033 5.6876216 2 TCGCC 8909980 0.80661696 5.0569296 1 CCGCA 8416055 0.74995434 7.506189 1 GCGCT 6521700 0.609128 5.445375 1 >>END_MODULE