scaffold1103	28814	28814	DML_dev	scaffold1103	subtractBed	intrn	27331	29386	.	-	.	Parent=CGI_10004869;
scaffold1103	30261	30261	DML_dev	scaffold1103	subtractBed	intrn	29444	31472	.	-	.	Parent=CGI_10004869;
scaffold1297	43485	43485	DML_dev	scaffold1297	subtractBed	intrn	43058	44184	.	+	.	Parent=CGI_10003521;
scaffold1337	180233	180233	DML_dev	scaffold1337	subtractBed	intrn	179966	180673	.	+	.	Parent=CGI_10012839;
scaffold252	29646	29646	DML_dev	scaffold252	subtractBed	intrn	28578	37397	.	-	.	Parent=CGI_10010758;
scaffold514	121218	121218	DML_dev	scaffold514	subtractBed	intrn	119278	121559	.	-	.	Parent=CGI_10018346;
scaffold532	46292	46292	DML_dev	scaffold532	subtractBed	intrn	45000	47499	.	+	.	Parent=CGI_10012520;
scaffold786	31882	31882	DML_dev	scaffold786	subtractBed	intrn	29045	34943	.	-	.	Parent=CGI_10013691;
scaffold868	93285	93285	DML_dev	scaffold868	subtractBed	intrn	92561	101536	.	-	.	Parent=CGI_10006359;
scaffold1036	133598	133598	DML_dev	scaffold1036	subtractBed	intrn	132575	134319	.	-	.	Parent=CGI_10019949;
scaffold1056	48341	48341	DML_dev	scaffold1056	subtractBed	intrn	47960	49533	.	+	.	Parent=CGI_10010176;
scaffold1117	13843	13843	DML_dev	scaffold1117	subtractBed	intrn	13786	14038	.	+	.	Parent=CGI_10002970;
scaffold12	328345	328345	DML_dev	scaffold12	subtractBed	intrn	326624	329190	.	+	.	Parent=CGI_10018042;
scaffold120	283584	283584	DML_dev	scaffold120	subtractBed	intrn	281309	285162	.	-	.	Parent=CGI_10017538;
scaffold121	505541	505541	DML_dev	scaffold121	subtractBed	intrn	505030	508524	.	-	.	Parent=CGI_10025657;
scaffold1264	136257	136257	DML_dev	scaffold1264	subtractBed	intrn	135293	139827	.	-	.	Parent=CGI_10007176;
scaffold1279	24606	24606	DML_dev	scaffold1279	subtractBed	intrn	13485	26096	.	-	.	Parent=CGI_10004028;
scaffold1309	67903	67903	DML_dev	scaffold1309	subtractBed	intrn	62756	69201	.	-	.	Parent=CGI_10011559;
scaffold1360	382056	382056	DML_dev	scaffold1360	subtractBed	intrn	377035	382323	.	+	.	Parent=CGI_10022652;
scaffold1362	507730	507730	DML_dev	scaffold1362	subtractBed	intrn	507695	507868	.	+	.	Parent=CGI_10023945;
scaffold1385	14426	14426	DML_dev	scaffold1385	subtractBed	intrn	14401	14541	.	-	.	Parent=CGI_10013832;
scaffold1533	134024	134024	DML_dev	scaffold1533	subtractBed	intrn	132452	134836	.	+	.	Parent=CGI_10012869;
scaffold1533	134039	134039	DML_dev	scaffold1533	subtractBed	intrn	132452	134836	.	+	.	Parent=CGI_10012869;
scaffold1600	131556	131556	DML_dev	scaffold1600	subtractBed	intrn	131199	137160	.	+	.	Parent=CGI_10013037;
scaffold241	21347	21347	DML_dev	scaffold241	subtractBed	intrn	19833	21888	.	+	.	Parent=CGI_10025082;
scaffold241	21356	21356	DML_dev	scaffold241	subtractBed	intrn	19833	21888	.	+	.	Parent=CGI_10025082;
scaffold246	17242	17242	DML_dev	scaffold246	subtractBed	intrn	16125	19130	.	+	.	Parent=CGI_10001799;
scaffold3	197079	197079	DML_dev	scaffold3	subtractBed	intrn	193014	198020	.	-	.	Parent=CGI_10027281;
scaffold364	30266	30266	DML_dev	scaffold364	subtractBed	intrn	23123	30639	.	+	.	Parent=CGI_10022675;
scaffold36812	6012	6012	DML_dev	scaffold36812	subtractBed	intrn	5583	7002	.	+	.	Parent=CGI_10002143;
scaffold39122	20287	20287	DML_dev	scaffold39122	subtractBed	intrn	16719	21290	.	-	.	Parent=CGI_10003164;
scaffold42128	85006	85006	DML_dev	scaffold42128	subtractBed	intrn	83873	90053	.	-	.	Parent=CGI_10006197;
scaffold42760	130388	130388	DML_dev	scaffold42760	subtractBed	intrn	127973	133437	.	+	.	Parent=CGI_10007632;
scaffold42850	184869	184869	DML_dev	scaffold42850	subtractBed	intrn	183903	186721	.	+	.	Parent=CGI_10007930;
scaffold42850	184869	184869	DML_dev	scaffold42850	subtractBed	intrn	183903	186721	.	-	.	Parent=CGI_10007931;
scaffold43116	66917	66917	DML_dev	scaffold43116	subtractBed	intrn	64769	68879	.	-	.	Parent=CGI_10008809;
scaffold43708	4442	4442	DML_dev	scaffold43708	subtractBed	intrn	3470	4606	.	-	.	Parent=CGI_10011964;
scaffold43708	48257	48257	DML_dev	scaffold43708	subtractBed	intrn	47448	50759	.	-	.	Parent=CGI_10011965;
scaffold44008	45290	45290	DML_dev	scaffold44008	subtractBed	intrn	37444	45740	.	-	.	Parent=CGI_10015282;
scaffold606	266817	266817	DML_dev	scaffold606	subtractBed	intrn	259570	270777	.	+	.	Parent=CGI_10012951;
scaffold659	155602	155602	DML_dev	scaffold659	subtractBed	intrn	155067	156397	.	-	.	Parent=CGI_10014702;
scaffold721	379153	379153	DML_dev	scaffold721	subtractBed	intrn	377852	379235	.	+	.	Parent=CGI_10022002;
scaffold760	397593	397593	DML_dev	scaffold760	subtractBed	intrn	395249	400391	.	-	.	Parent=CGI_10023987;
scaffold850	64019	64019	DML_dev	scaffold850	subtractBed	intrn	63803	64708	.	-	.	Parent=CGI_10011234;
scaffold992	63410	63410	DML_dev	scaffold992	subtractBed	intrn	63156	63874	.	-	.	Parent=CGI_10007507;
scaffold998	103542	103542	DML_dev	scaffold998	subtractBed	intrn	94224	103922	.	-	.	Parent=CGI_10006464;
scaffold1103	36043	36043	DML_dev	scaffold1103	subtractBed	intrn	33370	37079	.	-	.	Parent=CGI_10004869;
scaffold1219	735756	735756	DML_dev	scaffold1219	subtractBed	intrn	730370	737244	.	+	.	Parent=CGI_10024296;
scaffold1227	137921	137921	DML_dev	scaffold1227	subtractBed	intrn	137557	139069	.	-	.	Parent=CGI_10010051;
scaffold1307	395356	395356	DML_dev	scaffold1307	subtractBed	intrn	394906	397187	.	+	.	Parent=CGI_10023757;
scaffold1307	395356	395356	DML_dev	scaffold1307	subtractBed	intrn	394906	397187	.	-	.	Parent=CGI_10023758;
scaffold1490	309238	309238	DML_dev	scaffold1490	subtractBed	intrn	308926	312056	.	+	.	Parent=CGI_10014918;
scaffold1532	1594597	1594597	DML_dev	scaffold1532	subtractBed	intrn	1591174	1595202	.	-	.	Parent=CGI_10028312;
scaffold1532	1594607	1594607	DML_dev	scaffold1532	subtractBed	intrn	1591174	1595202	.	-	.	Parent=CGI_10028312;
scaffold1722	91592	91592	DML_dev	scaffold1722	subtractBed	intrn	90890	91902	.	+	.	Parent=CGI_10014872;
scaffold1879	102347	102347	DML_dev	scaffold1879	subtractBed	intrn	100461	107525	.	-	.	Parent=CGI_10007957;
scaffold36406	11429	11429	DML_dev	scaffold36406	subtractBed	intrn	11003	18752	.	-	.	Parent=CGI_10001890;
scaffold41164	53315	53315	DML_dev	scaffold41164	subtractBed	intrn	52456	54261	.	+	.	Parent=CGI_10004762;
scaffold41164	53335	53335	DML_dev	scaffold41164	subtractBed	intrn	52456	54261	.	+	.	Parent=CGI_10004762;
scaffold412	343846	343846	DML_dev	scaffold412	subtractBed	intrn	339067	345322	.	+	.	Parent=CGI_10018574;
scaffold852	66803	66803	DML_dev	scaffold852	subtractBed	intrn	66526	71731	.	+	.	Parent=CGI_10012036;
scaffold948	260196	260196	DML_dev	scaffold948	subtractBed	intrn	260031	262097	.	+	.	Parent=CGI_10020015;