#### Ensembl
In December 2013 [Ensembl](http://metazoa.ensembl.org/Crassostrea_gigas/Info/Index) incorporated the data. Multiple files are available at Ensembl but here are a few key ones.
Note they are updated regularly so check <http://metazoa.ensembl.org/info/website/ftp/index.html> to make sure you have the latest version.
Direct FTP links to most current versions  

* DNA <ftp://ftp.ensemblgenomes.org/pub/current/metazoa/fasta/crassostrea_gigas/dna/>
* cDNA <ftp://ftp.ensemblgenomes.org/pub/current/metazoa/fasta/crassostrea_gigas/cdna/>
* pep <ftp://ftp.ensemblgenomes.org/pub/current/metazoa/fasta/crassostrea_gigas/pep/>
* ncRNA <ftp://ftp.ensemblgenomes.org/pub/current/metazoa/fasta/crassostrea_gigas/ncrna/>


QuickLinks to common files   

Genome (soft-masked)   
_url_

FASTA: <http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_ensembl_tracks/Crassostrea_gigas.GCA_000297895.1.22.dna_sm.genome.fa>

Gzipped FASTA: <http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_ensembl_tracks/Crassostrea_gigas.GCA_000297895.1.22.dna_sm.genome.fa.gz>
 
_if mounted on eagle_

`/Volumes/web/trilobite/Crassostrea_gigas_ensembl_tracks/Crassostrea_gigas.GCA_000297895.1.22.dna_sm.genome.fa`

`/Volumes/web/trilobite/Crassostrea_gigas_ensembl_tracks/Crassostrea_gigas.GCA_000297895.1.22.dna_sm.genome.fa.gz`

---



#### GigaDB
Genomic sequence was first made available July 12, 2012 at GigaDB

Fang, X; Li, L; Luo, R; Xu, F; Wang, X; Zhu, Y; Yang, L; Huang, Z (2012): Genomic data from the Pacific oyster (_Crassostrea gigas_). GigaScience. <http://dx.doi.org/10.5524/100030>

Data can be directly accessed from GigaDB, however a few of the key fasta files are linked below:

* Genome ([oyster.v9.fa.gz](ftp://climb.genomics.cn/pub/10.5524/100001_101000/100030/genome_v9/oyster.v9.fa.gz))   
* Coding Sequence ([oyster.v9.glean.final.rename.gff.cds.gz](ftp://climb.genomics.cn/pub/10.5524/100001_101000/100030/gene_v9/oyster.v9.glean.final.rename.gff.cds.gz)) 
_yes that really is what they call the fasta file_  
* Protein Sequence ([oyster.v9.glean.final.rename.gff.pep.gz](ftp://climb.genomics.cn/pub/10.5524/100001_101000/100030/gene_v9/oyster.v9.glean.final.rename.gff.pep.gz)) 

***