Basic Statistics
Measure | Value |
---|---|
Filename | 11_37_S37_L001_R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 695562 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-76 |
%GC | 24 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCGCCG | 45 | 5.456968E-12 | 69.59123 | 56 |
GGTCGCC | 45 | 5.456968E-12 | 69.58121 | 55 |
TGGTCGC | 45 | 5.456968E-12 | 69.56117 | 54 |
CTCGGTG | 45 | 5.456968E-12 | 69.53115 | 49 |
ATCTCGG | 45 | 5.456968E-12 | 69.52115 | 47 |
CTGTGTA | 60 | 0.0 | 63.700226 | 39 |
AGTGTCT | 55 | 0.0 | 63.160152 | 28 |
TCTCGGT | 50 | 1.4551915E-11 | 62.578033 | 48 |
CCTGTGT | 50 | 1.4551915E-11 | 62.542038 | 38 |
TCGCCTG | 50 | 1.4551915E-11 | 62.537544 | 35 |
GCCTGTG | 50 | 1.4551915E-11 | 62.537544 | 37 |
GTGTCTT | 50 | 1.4551915E-11 | 62.52855 | 29 |
TGTCTTC | 50 | 1.4551915E-11 | 62.52855 | 30 |
AGATCTC | 45 | 4.0927262E-10 | 61.78324 | 45 |
GCCGTAT | 55 | 3.8198777E-11 | 56.958782 | 59 |
TAGATCT | 55 | 3.8198777E-11 | 56.86458 | 44 |
CGCCTGT | 55 | 3.8198777E-11 | 56.85231 | 36 |
GAAGAGC | 70 | 0.0 | 54.58842 | 6 |
GTCTTCG | 60 | 9.094947E-11 | 52.107124 | 31 |
GAGCGTC | 75 | 0.0 | 50.94919 | 9 |