zr2096_6_s1_R1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 517 lines in total Total number of methylation call strings processed: 1034 Final Cytosine Methylation Report ================================= Total number of C's analysed: 10133 Total methylated C's in CpG context: 1039 Total methylated C's in CHG context: 70 Total methylated C's in CHH context: 283 Total C to T conversions in CpG context: 360 Total C to T conversions in CHG context: 2172 Total C to T conversions in CHH context: 6209 C methylated in CpG context: 74.3% C methylated in CHG context: 3.1% C methylated in CHH context: 4.4%