/volume1/web/halfshell/genomic-databank/Olurida_v081/

This directory contains the Olurida_v081 FastA and correspondng FastA index file.

It also contains the Bisulfite_Genome subdirectories generated by Bismark and bowtie2.

Bisulfite genome was created using the following commands and programs:

bismark_dir="Bismark-0.19.0"
bowtie2_dir="bowtie2-2.3.4.1-linux-x86_64"

${bismark_dir}/bismark_genome_preparation \
--path_to_bowtie ${bowtie2_dir} \
--verbose ${genome}
---

FILES:

- Olurida_v081.fa: FastA file.

- Olurida_v081.fa.fai: Index file (via samtools faidx) of FastA.