17-02-28 20:03:38.964 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3===================
17-02-28 20:03:38.965 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:03:38.965 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:03:38.966 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:03:38.966 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:03:38.966 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:38.985 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:03:38.985 -08 000000031 INF: Y Motor: Start the move command
17-02-28 20:03:38.985 -08 000000031 INF: Y Motor: Xmit t 1\r
17-02-28 20:03:39.040 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:39.040 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:39.042 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:39.042 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:39.046 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:03:39.046 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Selecting Reagent HB2 (8)===================
17-02-28 20:03:39.046 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:03:39.046 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-02-28 20:03:39.047 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:03:39.047 -08 000000031 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:03:39.047 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.174 -08 000000031 INF: Y Motor: Unshifted Position: 5934930
17-02-28 20:03:39.190 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:39.190 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:39.192 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:39.192 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:39.224 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.340 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:03:39.340 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:03:39.340 -08 000000036 INF: ===================Camera #0 Frame #1===================
17-02-28 20:03:39.342 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:03:39.342 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:03:39.342 -08 000000067 INF: ===================Camera #2 Frame #1===================
17-02-28 20:03:39.349 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.486 -08 000000031 INF: Y Motor: Unshifted Position: 5888074
17-02-28 20:03:39.493 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:03:39.493 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:03:39.493 -08 000000036 INF: ===================Camera #0 Frame #3===================
17-02-28 20:03:39.496 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:03:39.496 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:03:39.496 -08 000000067 INF: ===================Camera #2 Frame #3===================
17-02-28 20:03:39.536 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.545 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:03:39.545 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:39.545 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:39.609 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:03:39.617 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:03:39.649 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:03:39.649 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:03:39.649 -08 000000036 INF: ===================Camera #0 Frame #4===================
17-02-28 20:03:39.653 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:03:39.653 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:03:39.653 -08 000000067 INF: ===================Camera #2 Frame #4===================
17-02-28 20:03:39.660 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.709 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:03:39.797 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:03:39.797 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:03:39.798 -08 000000031 INF: Y Motor: Unshifted Position: 5841571
17-02-28 20:03:39.802 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:03:39.802 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:03:39.802 -08 000000036 INF: ===================Camera #0 Frame #5===================
17-02-28 20:03:39.807 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:03:39.807 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:03:39.807 -08 000000067 INF: ===================Camera #2 Frame #5===================
17-02-28 20:03:39.848 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.856 -08 000000099 INF: FPGA: Recv ZWAIT 
17-02-28 20:03:39.856 -08 000000099 INF: FPGA: Recv TDIYWAIT
17-02-28 20:03:39.856 -08 000000097 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:03:39.857 -08 000000068 INF: ===================Serial===================
17-02-28 20:03:39.858 -08 000000097 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:03:39.858 -08 000000068 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:03:39.858 -08 000000068 INF: ===================Serial===================
17-02-28 20:03:39.859 -08 000000087 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:03:39.859 -08 000000032 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:03:39.859 -08 000000087 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:03:39.859 -08 000000087 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:03:39.859 -08 000000087 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:03:39.859 -08 000000087 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:03:39.859 -08 000000032 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:03:39.859 -08 000000032 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:03:39.859 -08 000000032 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:03:39.860 -08 000000032 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:03:39.860 -08 000000068 INF: ======================================
17-02-28 20:03:39.897 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:03:39.955 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:03:39.955 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:03:39.955 -08 000000036 INF: ===================Camera #0 Frame #6===================
17-02-28 20:03:39.958 -08 000000036 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:03:39.959 -08 000000036 INF: ===================CameraTDI Cleanup===================
17-02-28 20:03:39.973 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.973 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:03:39.973 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:03:39.973 -08 000000067 INF: ===================Camera #2 Frame #6===================
17-02-28 20:03:39.977 -08 000000067 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:03:39.978 -08 000000067 INF: ===================CameraTDI Cleanup===================
17-02-28 20:03:39.982 -08 000000036 INF: Camera #0 ReleaseBuffer
17-02-28 20:03:39.982 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:03:39.984 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:39.984 -08 000000036 INF: ======================================
17-02-28 20:03:40.008 -08 000000067 INF: Camera #2 ReleaseBuffer
17-02-28 20:03:40.008 -08 000000067 INF: ===================Camera TDI===================
17-02-28 20:03:40.009 -08 000000067 INF: ======================================
17-02-28 20:03:40.011 -08 000000054 INF: ===================Camera TDI===================
17-02-28 20:03:40.012 -08 000000054 INF: ======================================
17-02-28 20:03:40.084 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:40.109 -08 000000031 INF: Y Motor: Unshifted Position: 5797055
17-02-28 20:03:40.159 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:40.172 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:40.231 -08 000000030 INF: FPGA: Recv EX1MV
17-02-28 20:03:40.231 -08 000000030 INF: FPGA: Recv EX2MV
17-02-28 20:03:40.231 -08 000000032 INF: Excitation Filter 2: Moved 107 steps in 371.5679 ms
17-02-28 20:03:40.231 -08 000000032 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.6725 ms
17-02-28 20:03:40.231 -08 000000032 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.7492 ms
17-02-28 20:03:40.231 -08 000000087 INF: Excitation Filter 1: Moved 107 steps in 371.7808 ms
17-02-28 20:03:40.231 -08 000000087 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.0032 ms
17-02-28 20:03:40.231 -08 000000087 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.0789 ms
17-02-28 20:03:40.231 -08 000000032 INF: ======================================
17-02-28 20:03:40.231 -08 000000087 INF: ======================================
17-02-28 20:03:40.233 -08 000000097 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:03:40.234 -08 000000097 INF: ======================================
17-02-28 20:03:40.296 -08 000000031 INF: Y Motor: Unshifted Position: 5797041
17-02-28 20:03:40.296 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:03:40.296 -08 000000031 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:40.358 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:03:40.358 -08 000000031 INF: Y Motor: Moved to 62.9704 after 1311 ms
17-02-28 20:03:40.358 -08 000000031 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:03:40.420 -08 000000031 INF: Y Motor: Recv v 4097\r
17-02-28 20:03:40.420 -08 000000031 INF: Y Motor: Status After move finished OK:
17-02-28 20:03:40.420 -08 000000031 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:40.422 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:40.481 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:03:40.482 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:03:40.482 -08 000000031 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:40.482 -08 000000031 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:03:40.547 -08 000000031 INF: Y Motor: Recv v 134217728\r
17-02-28 20:03:40.547 -08 000000031 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:03:40.547 -08 000000031 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:03:40.547 -08 000000031 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:03:40.581 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:03:40.609 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:03:40.609 -08 000000031 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:03:40.609 -08 000000031 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:03:40.609 -08 000000031 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:40.670 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:40.671 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:03:40.671 -08 000000031 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:03:40.671 -08 000000031 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:40.733 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:03:40.733 -08 000000031 INF: ======================================
17-02-28 20:03:40.735 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:03:40.736 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:03:40.737 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:40.737 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:03:40.770 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:40.793 -08 000000080 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:03:40.793 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:03:40.855 -08 000000025 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:03:40.855 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:03:40.856 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:03:40.856 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:03:40.918 -08 000000027 INF: FPGA: Recv ZADCR 2426
17-02-28 20:03:40.918 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:03:40.918 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:03:40.956 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP18240R\r
17-02-28 20:03:40.982 -08 000000045 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:03:40.982 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:03:40.982 -08 000000042 INF: TDIScan finished after 6853.3145 ms
17-02-28 20:03:40.982 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:03:40.982 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:03:40.982 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:03:41.044 -08 000000055 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:03:41.045 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:41.045 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.045 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.046 -08 000000036 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:03:41.046 -08 000000025 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:03:41.046 -08 000000054 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:03:41.046 -08 000000036 INF: ======================================
17-02-28 20:03:41.046 -08 000000054 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:03:41.047 -08 000000054 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:03:41.047 -08 000000025 INF: ======================================
17-02-28 20:03:41.106 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:03:41.106 -08 000000054 INF: ======================================
17-02-28 20:03:41.107 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.108 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.109 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:03:41.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.135 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:03:41.145 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:41.160 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.160 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:03:41.186 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.186 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:03:41.210 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.211 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:03:41.211 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:03:41.212 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:03:41.220 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:03:41.220 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:03:41.220 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:03:41.231 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:41.481 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:41.544 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:41.794 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:41.854 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:41.906 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:03:41.930 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.081961519937134Best Z position at top surface = -0.153076123602626Best Z position at top surface + compensator offset = -0.130376123602626 C:2,L:2,T
17-02-28 20:03:41.931 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.153076123602626
17-02-28 20:03:41.931 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94346
17-02-28 20:03:41.931 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.081961519937134
17-02-28 20:03:41.931 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.60123
17-02-28 20:03:41.931 -08 000000042 INF: Z-height at LaneTopSurface is -0.153076123602626.
17-02-28 20:03:41.931 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:03:42.066 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:03:42.066 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:03:42.104 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:42.105 -08 000000077 INF: FPGA: Recv ZSTEP 
17-02-28 20:03:42.105 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:03:42.107 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.107 -08 000000042 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:03:42.107 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.108 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.108 -08 000000036 INF: ===================Move Tilt Motor 1===================
17-02-28 20:03:42.108 -08 000000085 INF: ===================Move Tilt Motor 2===================
17-02-28 20:03:42.109 -08 000000094 INF: ===================Move Tilt Motor 3===================
17-02-28 20:03:42.109 -08 000000036 INF: Tilt Motor 1: Moving to 5.0005 mm, started at 5.0020 mm, delta = -0.0015 mm
17-02-28 20:03:42.109 -08 000000036 INF: FPGA: Xmit T1RD\n
17-02-28 20:03:42.109 -08 000000085 INF: Tilt Motor 2: Moving to 5.3939 mm, started at 5.3924 mm, delta = 0.0015 mm
17-02-28 20:03:42.109 -08 000000094 INF: Tilt Motor 3: Moving to 5.3391 mm, started at 5.3378 mm, delta = 0.0013 mm
17-02-28 20:03:42.110 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:03:42.112 -08 000000094 INF: FPGA: Xmit T3RD\n
17-02-28 20:03:42.167 -08 000000084 INF: FPGA: Recv T1RD 19693
17-02-28 20:03:42.167 -08 000000084 INF: FPGA: Recv T2RD 21230
17-02-28 20:03:42.167 -08 000000084 INF: FPGA: Recv T3RD 21014
17-02-28 20:03:42.167 -08 000000036 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:03:42.167 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:03:42.167 -08 000000085 INF: Tilt Motor 2: Moving to 21236 encoder counts
17-02-28 20:03:42.167 -08 000000094 INF: Tilt Motor 3: Encoder: at motor step 3502 + 2/6
17-02-28 20:03:42.167 -08 000000085 INF: FPGA: Xmit T2MOVETO 21236\n
17-02-28 20:03:42.167 -08 000000094 INF: Tilt Motor 3: Moving to 21020 encoder counts
17-02-28 20:03:42.167 -08 000000036 INF: Tilt Motor 1: Moving to 19687 encoder counts
17-02-28 20:03:42.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:42.168 -08 000000094 INF: FPGA: Xmit T3MOVETO 21020\n
17-02-28 20:03:42.170 -08 000000036 INF: FPGA: Xmit T1MOVETO 19687\n
17-02-28 20:03:42.291 -08 000000030 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:03:42.291 -08 000000030 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:03:42.291 -08 000000030 INF: FPGA: Recv T1MOVETO 1
17-02-28 20:03:42.291 -08 000000036 INF: Tilt Motor 1: To move from 5.002 to 5.000 (-0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:03:42.291 -08 000000094 INF: Tilt Motor 3: To move from 5.338 to 5.339 (0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:03:42.291 -08 000000085 INF: Tilt Motor 2: To move from 5.392 to 5.394 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:03:42.291 -08 000000036 INF: FPGA: Xmit T1RD\n
17-02-28 20:03:42.292 -08 000000094 INF: FPGA: Xmit T3RD\n
17-02-28 20:03:42.294 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:03:42.353 -08 000000027 INF: FPGA: Recv T1RD 19687
17-02-28 20:03:42.353 -08 000000027 INF: FPGA: Recv T3RD 21021
17-02-28 20:03:42.353 -08 000000027 INF: FPGA: Recv T2RD 21236
17-02-28 20:03:42.353 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3539 + 2/6
17-02-28 20:03:42.353 -08 000000036 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:03:42.353 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:03:42.353 -08 000000094 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:03:42.354 -08 000000036 INF: FPGA: Xmit T1RD\n
17-02-28 20:03:42.356 -08 000000094 INF: FPGA: Xmit T3RD\n
17-02-28 20:03:42.415 -08 000000083 INF: FPGA: Recv T2RD 21236
17-02-28 20:03:42.415 -08 000000083 INF: FPGA: Recv T1RD 19687
17-02-28 20:03:42.415 -08 000000083 INF: FPGA: Recv T3RD 21021
17-02-28 20:03:42.415 -08 000000036 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:03:42.415 -08 000000094 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:03:42.415 -08 000000036 INF: FPGA: Xmit T1RD\n
17-02-28 20:03:42.415 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3539 + 2/6
17-02-28 20:03:42.416 -08 000000094 INF: FPGA: Xmit T3RD\n
17-02-28 20:03:42.418 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:42.418 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:03:42.477 -08 000000039 INF: FPGA: Recv T1RD 19687
17-02-28 20:03:42.477 -08 000000039 INF: FPGA: Recv T3RD 21021
17-02-28 20:03:42.477 -08 000000039 INF: FPGA: Recv T2RD 21236
17-02-28 20:03:42.477 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3539 + 2/6
17-02-28 20:03:42.477 -08 000000036 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:03:42.477 -08 000000094 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:03:42.477 -08 000000036 INF: Tilt Motor 1: After move to 5.0005, error = 0.0000, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:03:42.477 -08 000000094 INF: Tilt Motor 3: After move to 5.3391, error = 0.0003, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:03:42.477 -08 000000036 INF: Tilt Motor 1: Moved to 5.0005 after 368.4567 ms
17-02-28 20:03:42.477 -08 000000094 INF: Tilt Motor 3: Moved to 5.3393 after 368.3251 ms
17-02-28 20:03:42.477 -08 000000085 INF: Tilt Motor 2: After move to 5.3939, error = 0.0000, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:03:42.477 -08 000000085 INF: Tilt Motor 2: Moved to 5.3939 after 368.6106 ms
17-02-28 20:03:42.477 -08 000000036 INF: ======================================
17-02-28 20:03:42.477 -08 000000094 INF: ======================================
17-02-28 20:03:42.478 -08 000000085 INF: ======================================
17-02-28 20:03:42.478 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:42.478 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.479 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.480 -08 000000042 INF: ETF Best Z: -0.1303761 mm (34177 DAC)
17-02-28 20:03:42.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.481 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:03:42.481 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:03:42.909 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:42.909 -08 000000030 INF: FPGA: Recv MIOCOMPF
17-02-28 20:03:42.909 -08 000000042 INF: Compensator: Moved IntoPath in 428 ms
17-02-28 20:03:42.910 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.917 -08 000000042 INF: Swath 1 position calculated to be: {X=71.39664, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:03:42.917 -08 000000042 INF: Swath 2 position calculated to be: {X=72.50464, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:03:42.923 -08 000000042 INF: Swath 0: Converted transform from (-49.84806, 8.130718) pixels to (-0.01725, 0.00276) mm.
17-02-28 20:03:42.929 -08 000000042 INF: Swath 1: Converted transform from (-65.66621, 7.260032) pixels to (-0.02277, 0.002415) mm.
17-02-28 20:03:42.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:03:42.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:03:42.930 -08 000000042 INF: Transformed XStagePosition from 71.39664 mm to 71.3793869633228 mm.
17-02-28 20:03:42.941 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.55584935553 mm.
17-02-28 20:03:42.941 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.35584935553 mm.
17-02-28 20:03:42.941 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.44659935553 mm.
17-02-28 20:03:42.943 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:42.943 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:03:42.944 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:42.944 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = B_1
17-02-28 20:03:42.952 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:03:42.952 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:03:42.953 -08 000000098 INF: ===================MoveEmissionFilters===================
17-02-28 20:03:42.953 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:03:42.953 -08 000000031 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:03:42.954 -08 000000069 INF: ===================Move X,Y, Parallel===================
17-02-28 20:03:42.954 -08 000000029 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:03:42.954 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:03:42.954 -08 000000077 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:03:42.954 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:03:42.954 -08 000000031 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:03:42.954 -08 000000031 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:03:42.955 -08 000000031 INF: Z Motor: Moving to -0.1504 mm, started at -0.0100 mm
17-02-28 20:03:42.955 -08 000000054 INF: ===================Move X Motor without settling===================
17-02-28 20:03:42.955 -08 000000031 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:03:42.955 -08 000000029 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:03:42.955 -08 000000077 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:03:42.955 -08 000000054 INF: X Motor: Xmit PR VM\n
17-02-28 20:03:42.955 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:03:42.955 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:03:42.955 -08 000000095 INF: ===================Move Y Motor without settling===================
17-02-28 20:03:42.955 -08 000000095 INF: Y Motor: Moving to 64.5558 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:03:42.956 -08 000000039 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:03:42.956 -08 000000095 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:03:42.956 -08 000000025 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:03:42.956 -08 000000036 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:03:42.956 -08 000000025 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:03:42.956 -08 000000094 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:03:42.956 -08 000000087 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:03:42.956 -08 000000095 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:42.956 -08 000000097 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:03:42.956 -08 000000039 INF: ======================================
17-02-28 20:03:42.956 -08 000000085 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:03:42.956 -08 000000094 INF: ======================================
17-02-28 20:03:42.957 -08 000000097 INF: ======================================
17-02-28 20:03:42.957 -08 000000085 INF: ======================================
17-02-28 20:03:42.957 -08 000000065 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:03:42.957 -08 000000036 INF: ======================================
17-02-28 20:03:42.957 -08 000000065 INF: ======================================
17-02-28 20:03:42.958 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:03:42.959 -08 000000077 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:03:42.959 -08 000000025 INF: ======================================
17-02-28 20:03:42.959 -08 000000087 INF: ======================================
17-02-28 20:03:42.960 -08 000000055 INF: ======================================
17-02-28 20:03:42.960 -08 000000077 INF: ======================================
17-02-28 20:03:42.960 -08 000000029 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:03:42.960 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:03:42.961 -08 000000029 INF: ======================================
17-02-28 20:03:42.962 -08 000000078 INF: ======================================
17-02-28 20:03:42.962 -08 000000098 INF: ======================================
17-02-28 20:03:42.963 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:43.023 -08 000000085 INF: FPGA: Recv ZTRG 
17-02-28 20:03:43.023 -08 000000031 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:03:43.025 -08 000000054 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:03:43.025 -08 000000054 INF: X Motor: Xmit PR VI\n
17-02-28 20:03:43.025 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:03:43.025 -08 000000095 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:03:43.025 -08 000000095 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:43.088 -08 000000070 INF: FPGA: Recv ZYT 
17-02-28 20:03:43.088 -08 000000031 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:03:43.088 -08 000000031 INF: FPGA: Xmit ZMV 39420\n
17-02-28 20:03:43.090 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:03:43.090 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:43.090 -08 000000054 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:03:43.090 -08 000000054 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:03:43.090 -08 000000054 INF: X Motor: Moving to 71.3794 mm @15.000 mm/sec, started at 71.9517 mm
17-02-28 20:03:43.090 -08 000000054 INF: X Motor: Xmit MA 5071\n
17-02-28 20:03:43.149 -08 000000036 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:03:43.149 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:03:43.151 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:03:43.151 -08 000000095 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:43.151 -08 000000095 INF: Y Motor: Set target position to 5955585 encoder counts
17-02-28 20:03:43.151 -08 000000095 INF: Y Motor: Xmit s r0xca 5955585\r
17-02-28 20:03:43.151 -08 000000054 INF: X Motor: Recv MA 5071\r\n>
17-02-28 20:03:43.152 -08 000000054 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:03:43.213 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:03:43.213 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:43.213 -08 000000095 INF: Y Motor: Start the move command
17-02-28 20:03:43.213 -08 000000095 INF: Y Motor: Xmit t 1\r
17-02-28 20:03:43.275 -08 000000030 INF: FPGA: Recv ZMV 
17-02-28 20:03:43.275 -08 000000031 INF: Z Motor: MoveAndTrigger 'ZMV' command took 186.9068 ms
17-02-28 20:03:43.275 -08 000000031 INF: FPGA: Xmit ZDACR\n
17-02-28 20:03:43.276 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:43.277 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:03:43.277 -08 000000095 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:03:43.277 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:43.338 -08 000000040 INF: FPGA: Recv ZDACR 39420
17-02-28 20:03:43.338 -08 000000031 INF: Z Motor: MoveAndTrigger took 383.2059 ms w/comms
17-02-28 20:03:43.338 -08 000000031 INF: Z Motor: After move to -0.1504, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:03:43.338 -08 000000031 INF: Z Motor: MoveAbsStepped took 383.3975 ms
17-02-28 20:03:43.338 -08 000000031 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:03:43.339 -08 000000031 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:03:43.340 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:03:43.340 -08 000000084 INF: ===================Camera Arm TDI===================
17-02-28 20:03:43.341 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:43.341 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:03:43.342 -08 000000085 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:03:43.342 -08 000000084 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:03:43.342 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:03:43.342 -08 000000085 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:03:43.398 -08 000000065 INF: FPGA: Recv ZSEL 
17-02-28 20:03:43.398 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:03:43.398 -08 000000085 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:03:43.399 -08 000000095 INF: Y Motor: Unshifted Position: 5880597
17-02-28 20:03:43.449 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:43.462 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:03:43.462 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:03:43.463 -08 000000085 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:03:43.464 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:43.465 -08 000000085 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:03:43.465 -08 000000085 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:03:43.465 -08 000000085 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:03:43.524 -08 000000068 INF: FPGA: Recv ZSTEP 
17-02-28 20:03:43.524 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:43.526 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:43.526 -08 000000085 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:03:43.526 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:43.528 -08 000000085 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:03:43.528 -08 000000085 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:03:43.528 -08 000000085 INF: Z Motor: Arming to move to -0.1104 mm
17-02-28 20:03:43.528 -08 000000085 INF: FPGA: Xmit ZYT 6435585 4\n
17-02-28 20:03:43.576 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:43.586 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:03:43.586 -08 000000085 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6380597 enc / 63.806 mm / ) = 6435585 enc / 64.356 mm
17-02-28 20:03:43.586 -08 000000085 INF: FPGA: Xmit ZARM 28934\n
17-02-28 20:03:43.587 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:43.588 -08 000000054 INF: X Motor: Xmit PR ER\n
17-02-28 20:03:43.648 -08 000000081 INF: FPGA: Recv ZARM
17-02-28 20:03:43.648 -08 000000085 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8686 ms
17-02-28 20:03:43.648 -08 000000085 INF: Z Motor: ArmAbsStepped took 119.842 ms
17-02-28 20:03:43.648 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:43.649 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:03:43.650 -08 000000054 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:03:43.650 -08 000000054 INF: X Motor: Moved to 71.3804 after 498 ms
17-02-28 20:03:43.650 -08 000000054 INF: ======================================
17-02-28 20:03:43.651 -08 000000085 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:03:43.651 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:03:43.653 -08 000000085 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:03:43.653 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:03:43.654 -08 000000085 INF: ======================================
17-02-28 20:03:43.711 -08 000000095 INF: Y Motor: Unshifted Position: 5955587
17-02-28 20:03:43.711 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:03:43.711 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:43.776 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:03:43.776 -08 000000095 INF: Y Motor: Moved to 64.5559 after 499 ms
17-02-28 20:03:43.776 -08 000000095 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:03:43.837 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:43.838 -08 000000095 INF: Y Motor: Recv v 4096\r
17-02-28 20:03:43.838 -08 000000095 INF: Y Motor: Status After move finished OK:
17-02-28 20:03:43.838 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:43.900 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:43.901 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:03:43.901 -08 000000095 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:43.901 -08 000000095 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:03:43.963 -08 000000095 INF: Y Motor: Recv v 402653184\r
17-02-28 20:03:43.963 -08 000000095 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:03:43.963 -08 000000095 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:03:43.963 -08 000000095 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:03:44.025 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:03:44.025 -08 000000095 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:03:44.025 -08 000000095 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:03:44.025 -08 000000095 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:44.087 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:03:44.087 -08 000000095 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:03:44.087 -08 000000095 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:44.149 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:03:44.149 -08 000000095 INF: ======================================
17-02-28 20:03:44.150 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:44.150 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:03:44.151 -08 000000069 INF: ======================================
17-02-28 20:03:44.210 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:44.313 -08 000000084 INF: Camera #0 AttachBuffer (imageDataPtr = 56909434928 imgPtr = 56909434928 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:03:44.314 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:03:44.314 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:03:44.329 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:03:44.331 -08 000000084 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:03:44.460 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:44.524 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:44.774 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:44.835 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:45.087 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:45.147 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:45.336 -08 000000084 INF: Camera #2 AttachBuffer (imageDataPtr = 58721374256 imgPtr = 59627343920 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:03:45.336 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:03:45.336 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:03:45.351 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:03:45.353 -08 000000084 INF: ===================Camera Arm TDI===================
17-02-28 20:03:45.354 -08 000000084 INF: ======================================
17-02-28 20:03:45.355 -08 000000031 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:03:45.356 -08 000000031 INF: ======================================
17-02-28 20:03:45.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:03:45.358 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:45.358 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:03:45.358 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:03:45.397 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:45.459 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:45.460 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:03:45.460 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:03:45.520 -08 000000036 INF: FPGA: Recv ZFREQCL
17-02-28 20:03:45.520 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:03:45.520 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:45.521 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:03:45.582 -08 000000092 INF: FPGA: Recv TDIYERD 6455585
17-02-28 20:03:45.582 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455585 counts (64.556 mm)
17-02-28 20:03:45.582 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:03:45.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:03:45.583 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:03:45.583 -08 000000101 INF: ===================Set YMotor gains for scans===================
17-02-28 20:03:45.584 -08 000000101 INF: ======================================
17-02-28 20:03:45.584 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:03:45.585 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:03:45.585 -08 000000073 INF: FPGA: Xmit TDIYPOS 6344660\n
17-02-28 20:03:45.644 -08 000000077 INF: FPGA: Recv TDIYPOS
17-02-28 20:03:45.644 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:03:45.645 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:03:45.646 -08 000000073 INF: FPGA: Xmit TDIYARM3 139264 6435585 1 1\n
17-02-28 20:03:45.706 -08 000000080 INF: FPGA: Recv TDIYARM3
17-02-28 20:03:45.706 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:03:45.707 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:03:45.708 -08 000000073 INF: ======================================
17-02-28 20:03:45.709 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:45.709 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:03:45.710 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:45.710 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:45.710 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:45.711 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:45.712 -08 000000039 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:03:45.712 -08 000000085 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:03:45.712 -08 000000039 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:03:45.712 -08 000000039 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:03:45.712 -08 000000039 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:03:45.712 -08 000000039 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:03:45.712 -08 000000085 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:03:45.712 -08 000000085 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:03:45.712 -08 000000085 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:03:45.713 -08 000000085 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:03:45.772 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:46.022 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:46.083 -08 000000094 INF: FPGA: Recv EX2MV
17-02-28 20:03:46.083 -08 000000094 INF: FPGA: Recv EX1MV
17-02-28 20:03:46.083 -08 000000085 INF: Excitation Filter 1: Moved -107 steps in 370.8323 ms
17-02-28 20:03:46.083 -08 000000039 INF: Excitation Filter 2: Moved -107 steps in 371.0334 ms
17-02-28 20:03:46.083 -08 000000085 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 370.9281 ms
17-02-28 20:03:46.083 -08 000000085 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 371.0756 ms
17-02-28 20:03:46.083 -08 000000039 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 371.117 ms
17-02-28 20:03:46.083 -08 000000039 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 371.2866 ms
17-02-28 20:03:46.083 -08 000000085 INF: ======================================
17-02-28 20:03:46.083 -08 000000039 INF: ======================================
17-02-28 20:03:46.084 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:46.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:46.086 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:46.086 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:03:46.086 -08 000000030 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:03:46.086 -08 000000084 INF: ===================FPGA Z Wait===================
17-02-28 20:03:46.087 -08 000000068 INF: ===================Move Y Motor without settling===================
17-02-28 20:03:46.087 -08 000000068 INF: Y Motor: Moving to 14.9075 mm @6.500 mm/sec, started at 64.5559 mm
17-02-28 20:03:46.087 -08 000000068 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:03:46.087 -08 000000068 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:46.087 -08 000000084 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:03:46.087 -08 000000090 INF: ===================Camera TDI, Parallel===================
17-02-28 20:03:46.087 -08 000000030 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:03:46.088 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:03:46.088 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:03:46.090 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:46.090 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:46.090 -08 000000030 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:03:46.090 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:46.090 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:46.147 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:03:46.147 -08 000000068 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:03:46.147 -08 000000068 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:46.210 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:03:46.210 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:46.241 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:46.241 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:46.241 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:46.241 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:46.272 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:03:46.272 -08 000000068 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:46.272 -08 000000068 INF: Y Motor: Set target position to 990751 encoder counts
17-02-28 20:03:46.272 -08 000000068 INF: Y Motor: Xmit s r0xca 990751\r
17-02-28 20:03:46.334 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:03:46.334 -08 000000068 INF: Y Motor: Start the move command
17-02-28 20:03:46.334 -08 000000068 INF: Y Motor: Xmit t 1\r
17-02-28 20:03:46.335 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:46.391 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:46.391 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:46.391 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:46.391 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:46.397 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:46.398 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:03:46.398 -08 000000068 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:03:46.398 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:46.458 -08 000000083 INF: FPGA: Recv ZWAIT 
17-02-28 20:03:46.458 -08 000000084 INF: ======================================
17-02-28 20:03:46.520 -08 000000068 INF: Y Motor: Unshifted Position: 5892429
17-02-28 20:03:46.541 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:03:46.541 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:03:46.541 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:03:46.541 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:03:46.541 -08 000000077 INF: ===================Camera #0 Frame #5===================
17-02-28 20:03:46.541 -08 000000062 INF: ===================Camera #2 Frame #5===================
17-02-28 20:03:46.570 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:46.647 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:46.695 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:46.706 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:03:46.706 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:03:46.706 -08 000000077 INF: ===================Camera #0 Frame #11===================
17-02-28 20:03:46.707 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:03:46.707 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:03:46.707 -08 000000062 INF: ===================Camera #2 Frame #11===================
17-02-28 20:03:46.709 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:46.835 -08 000000068 INF: Y Motor: Unshifted Position: 5690066
17-02-28 20:03:46.874 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:03:46.874 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:03:46.874 -08 000000077 INF: ===================Camera #0 Frame #17===================
17-02-28 20:03:46.876 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:03:46.876 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:03:46.876 -08 000000062 INF: ===================Camera #2 Frame #17===================
17-02-28 20:03:46.885 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:46.959 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:47.009 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.020 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:47.042 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:03:47.042 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:03:47.042 -08 000000077 INF: ===================Camera #0 Frame #23===================
17-02-28 20:03:47.045 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:03:47.045 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:03:47.045 -08 000000062 INF: ===================Camera #2 Frame #23===================
17-02-28 20:03:47.146 -08 000000068 INF: Y Motor: Unshifted Position: 5486408
17-02-28 20:03:47.196 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.210 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:03:47.210 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:03:47.210 -08 000000077 INF: ===================Camera #0 Frame #29===================
17-02-28 20:03:47.214 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:03:47.214 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:03:47.214 -08 000000062 INF: ===================Camera #2 Frame #29===================
17-02-28 20:03:47.270 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:47.321 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.332 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:47.378 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:03:47.378 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:03:47.378 -08 000000077 INF: ===================Camera #0 Frame #35===================
17-02-28 20:03:47.383 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:03:47.383 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:03:47.383 -08 000000062 INF: ===================Camera #2 Frame #36===================
17-02-28 20:03:47.456 -08 000000068 INF: Y Motor: Unshifted Position: 5284900
17-02-28 20:03:47.506 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.546 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:03:47.546 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:03:47.546 -08 000000077 INF: ===================Camera #0 Frame #42===================
17-02-28 20:03:47.556 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:03:47.556 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:03:47.556 -08 000000062 INF: ===================Camera #2 Frame #42===================
17-02-28 20:03:47.582 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:47.632 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.642 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:47.718 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:03:47.718 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:03:47.718 -08 000000077 INF: ===================Camera #0 Frame #48===================
17-02-28 20:03:47.725 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:03:47.725 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:03:47.725 -08 000000062 INF: ===================Camera #2 Frame #48===================
17-02-28 20:03:47.768 -08 000000068 INF: Y Motor: Unshifted Position: 5080147
17-02-28 20:03:47.818 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.887 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:03:47.887 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:03:47.887 -08 000000077 INF: ===================Camera #0 Frame #54===================
17-02-28 20:03:47.892 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:47.894 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:03:47.894 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:03:47.894 -08 000000062 INF: ===================Camera #2 Frame #54===================
17-02-28 20:03:47.945 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.956 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:48.056 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:03:48.056 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:03:48.056 -08 000000077 INF: ===================Camera #0 Frame #60===================
17-02-28 20:03:48.063 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:03:48.063 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:03:48.063 -08 000000062 INF: ===================Camera #2 Frame #61===================
17-02-28 20:03:48.082 -08 000000068 INF: Y Motor: Unshifted Position: 4878429
17-02-28 20:03:48.132 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:48.206 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:48.225 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:03:48.225 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:03:48.225 -08 000000077 INF: ===================Camera #0 Frame #67===================
17-02-28 20:03:48.235 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:03:48.235 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:03:48.235 -08 000000062 INF: ===================Camera #2 Frame #67===================
17-02-28 20:03:48.257 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:48.266 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:48.392 -08 000000068 INF: Y Motor: Unshifted Position: 4674337
17-02-28 20:03:48.397 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:03:48.397 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:03:48.397 -08 000000077 INF: ===================Camera #0 Frame #73===================
17-02-28 20:03:48.404 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:03:48.404 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:03:48.404 -08 000000062 INF: ===================Camera #2 Frame #73===================
17-02-28 20:03:48.442 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:48.516 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:48.565 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:03:48.565 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:03:48.565 -08 000000077 INF: ===================Camera #0 Frame #79===================
17-02-28 20:03:48.569 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:48.573 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:03:48.573 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:03:48.573 -08 000000062 INF: ===================Camera #2 Frame #79===================
17-02-28 20:03:48.580 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:48.704 -08 000000068 INF: Y Motor: Unshifted Position: 4472608
17-02-28 20:03:48.734 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:03:48.734 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:03:48.734 -08 000000077 INF: ===================Camera #0 Frame #85===================
17-02-28 20:03:48.742 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:03:48.742 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:03:48.742 -08 000000062 INF: ===================Camera #2 Frame #86===================
17-02-28 20:03:48.754 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:48.830 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:48.879 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:48.890 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:48.902 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:03:48.902 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:03:48.902 -08 000000077 INF: ===================Camera #0 Frame #92===================
17-02-28 20:03:48.915 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:03:48.915 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:03:48.915 -08 000000062 INF: ===================Camera #2 Frame #92===================
17-02-28 20:03:49.018 -08 000000068 INF: Y Motor: Unshifted Position: 4269159
17-02-28 20:03:49.068 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:49.074 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:03:49.074 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:03:49.074 -08 000000077 INF: ===================Camera #0 Frame #98===================
17-02-28 20:03:49.085 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:03:49.085 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:03:49.085 -08 000000062 INF: ===================Camera #2 Frame #98===================
17-02-28 20:03:49.140 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:49.191 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:49.202 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:49.244 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:03:49.244 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:03:49.244 -08 000000077 INF: ===================Camera #0 Frame #104===================
17-02-28 20:03:49.256 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:03:49.256 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:03:49.256 -08 000000062 INF: ===================Camera #2 Frame #105===================
17-02-28 20:03:49.328 -08 000000068 INF: Y Motor: Unshifted Position: 4067432
17-02-28 20:03:49.378 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:49.413 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:03:49.413 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:03:49.413 -08 000000077 INF: ===================Camera #0 Frame #110===================
17-02-28 20:03:49.429 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:03:49.429 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:03:49.429 -08 000000062 INF: ===================Camera #2 Frame #111===================
17-02-28 20:03:49.452 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:49.503 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:49.514 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:49.583 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:03:49.583 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:03:49.583 -08 000000077 INF: ===================Camera #0 Frame #117===================
17-02-28 20:03:49.599 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:03:49.599 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:03:49.599 -08 000000062 INF: ===================Camera #2 Frame #117===================
17-02-28 20:03:49.642 -08 000000068 INF: Y Motor: Unshifted Position: 3863119
17-02-28 20:03:49.692 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:49.756 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:03:49.756 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:03:49.756 -08 000000077 INF: ===================Camera #0 Frame #123===================
17-02-28 20:03:49.764 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:49.769 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:03:49.769 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:03:49.769 -08 000000062 INF: ===================Camera #2 Frame #123===================
17-02-28 20:03:49.815 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:49.829 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:49.925 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:03:49.925 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:03:49.925 -08 000000077 INF: ===================Camera #0 Frame #129===================
17-02-28 20:03:49.939 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:03:49.939 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:03:49.939 -08 000000062 INF: ===================Camera #2 Frame #130===================
17-02-28 20:03:49.954 -08 000000068 INF: Y Motor: Unshifted Position: 3660964
17-02-28 20:03:50.004 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.079 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:50.094 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:03:50.094 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:03:50.094 -08 000000077 INF: ===================Camera #0 Frame #135===================
17-02-28 20:03:50.111 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:03:50.111 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:03:50.111 -08 000000062 INF: ===================Camera #2 Frame #136===================
17-02-28 20:03:50.130 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.138 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:50.264 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:03:50.264 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:03:50.264 -08 000000077 INF: ===================Camera #0 Frame #142===================
17-02-28 20:03:50.266 -08 000000068 INF: Y Motor: Unshifted Position: 3456653
17-02-28 20:03:50.282 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:03:50.282 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:03:50.282 -08 000000062 INF: ===================Camera #2 Frame #142===================
17-02-28 20:03:50.316 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.388 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:50.437 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:03:50.437 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:03:50.437 -08 000000077 INF: ===================Camera #0 Frame #148===================
17-02-28 20:03:50.440 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.452 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:50.452 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:03:50.452 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:03:50.452 -08 000000062 INF: ===================Camera #2 Frame #149===================
17-02-28 20:03:50.577 -08 000000068 INF: Y Motor: Unshifted Position: 3255157
17-02-28 20:03:50.606 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:03:50.606 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:03:50.606 -08 000000077 INF: ===================Camera #0 Frame #154===================
17-02-28 20:03:50.625 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:03:50.625 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:03:50.625 -08 000000062 INF: ===================Camera #2 Frame #155===================
17-02-28 20:03:50.627 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.702 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:50.751 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.762 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:50.776 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:03:50.776 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:03:50.776 -08 000000077 INF: ===================Camera #0 Frame #161===================
17-02-28 20:03:50.795 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:03:50.795 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:03:50.795 -08 000000062 INF: ===================Camera #2 Frame #161===================
17-02-28 20:03:50.889 -08 000000068 INF: Y Motor: Unshifted Position: 3050840
17-02-28 20:03:50.939 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.949 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:03:50.949 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:03:50.949 -08 000000077 INF: ===================Camera #0 Frame #167===================
17-02-28 20:03:50.965 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:03:50.965 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:03:50.965 -08 000000062 INF: ===================Camera #2 Frame #167===================
17-02-28 20:03:51.012 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:51.065 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:51.076 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:51.119 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:03:51.119 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:03:51.119 -08 000000077 INF: ===================Camera #0 Frame #173===================
17-02-28 20:03:51.135 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:03:51.135 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:03:51.135 -08 000000062 INF: ===================Camera #2 Frame #174===================
17-02-28 20:03:51.200 -08 000000068 INF: Y Motor: Unshifted Position: 2849996
17-02-28 20:03:51.250 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:51.289 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:03:51.289 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:03:51.289 -08 000000077 INF: ===================Camera #0 Frame #179===================
17-02-28 20:03:51.308 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:03:51.308 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:03:51.308 -08 000000062 INF: ===================Camera #2 Frame #180===================
17-02-28 20:03:51.326 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:51.376 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:51.387 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:51.459 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:03:51.459 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:03:51.459 -08 000000077 INF: ===================Camera #0 Frame #186===================
17-02-28 20:03:51.478 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:03:51.478 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:03:51.478 -08 000000062 INF: ===================Camera #2 Frame #186===================
17-02-28 20:03:51.512 -08 000000068 INF: Y Motor: Unshifted Position: 2646333
17-02-28 20:03:51.562 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:51.632 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:03:51.632 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:03:51.632 -08 000000077 INF: ===================Camera #0 Frame #192===================
17-02-28 20:03:51.637 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:51.648 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:03:51.648 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:03:51.648 -08 000000062 INF: ===================Camera #2 Frame #193===================
17-02-28 20:03:51.720 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:51.722 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:51.802 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:03:51.802 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:03:51.802 -08 000000077 INF: ===================Camera #0 Frame #198===================
17-02-28 20:03:51.842 -08 000000068 INF: Y Motor: Unshifted Position: 2433785
17-02-28 20:03:51.889 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:03:51.889 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:03:51.889 -08 000000062 INF: ===================Camera #2 Frame #202===================
17-02-28 20:03:51.892 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:51.972 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:51.973 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:03:51.973 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:03:51.973 -08 000000077 INF: ===================Camera #0 Frame #205===================
17-02-28 20:03:52.016 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.027 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:52.070 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:03:52.070 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:03:52.070 -08 000000062 INF: ===================Camera #2 Frame #208===================
17-02-28 20:03:52.146 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:03:52.146 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:03:52.146 -08 000000077 INF: ===================Camera #0 Frame #211===================
17-02-28 20:03:52.155 -08 000000068 INF: Y Motor: Unshifted Position: 2231417
17-02-28 20:03:52.205 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.241 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:03:52.241 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:03:52.241 -08 000000062 INF: ===================Camera #2 Frame #214===================
17-02-28 20:03:52.277 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:52.316 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:03:52.316 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:03:52.316 -08 000000077 INF: ===================Camera #0 Frame #217===================
17-02-28 20:03:52.326 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.340 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:52.413 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:03:52.413 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:03:52.413 -08 000000062 INF: ===================Camera #2 Frame #221===================
17-02-28 20:03:52.464 -08 000000068 INF: Y Motor: Unshifted Position: 2027317
17-02-28 20:03:52.486 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:03:52.486 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:03:52.486 -08 000000077 INF: ===================Camera #0 Frame #223===================
17-02-28 20:03:52.514 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.585 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:03:52.585 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:03:52.585 -08 000000062 INF: ===================Camera #2 Frame #227===================
17-02-28 20:03:52.590 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:52.640 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.650 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:52.656 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:03:52.656 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:03:52.656 -08 000000077 INF: ===================Camera #0 Frame #230===================
17-02-28 20:03:52.756 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:03:52.756 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:03:52.756 -08 000000062 INF: ===================Camera #2 Frame #233===================
17-02-28 20:03:52.778 -08 000000068 INF: Y Motor: Unshifted Position: 1824946
17-02-28 20:03:52.828 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.829 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:03:52.829 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:03:52.829 -08 000000077 INF: ===================Camera #0 Frame #236===================
17-02-28 20:03:52.900 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:52.927 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:03:52.927 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:03:52.927 -08 000000062 INF: ===================Camera #2 Frame #240===================
17-02-28 20:03:52.952 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.964 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:52.999 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:03:52.999 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:03:52.999 -08 000000077 INF: ===================Camera #0 Frame #242===================
17-02-28 20:03:53.088 -08 000000068 INF: Y Motor: Unshifted Position: 1622802
17-02-28 20:03:53.101 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:03:53.101 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:03:53.101 -08 000000062 INF: ===================Camera #2 Frame #246===================
17-02-28 20:03:53.138 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:53.169 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:03:53.169 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:03:53.169 -08 000000077 INF: ===================Camera #0 Frame #249===================
17-02-28 20:03:53.214 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:53.264 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:53.272 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:03:53.272 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:03:53.272 -08 000000062 INF: ===================Camera #2 Frame #252===================
17-02-28 20:03:53.275 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:03:53.275 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:53.275 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:53.276 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:03:53.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:03:53.342 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:03:53.342 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:03:53.342 -08 000000077 INF: ===================Camera #0 Frame #255===================
17-02-28 20:03:53.400 -08 000000068 INF: Y Motor: Unshifted Position: 1419127
17-02-28 20:03:53.442 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:03:53.442 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:03:53.442 -08 000000062 INF: ===================Camera #2 Frame #259===================
17-02-28 20:03:53.450 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:53.512 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:03:53.512 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:03:53.512 -08 000000077 INF: ===================Camera #0 Frame #261===================
17-02-28 20:03:53.574 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:53.616 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:03:53.616 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:03:53.616 -08 000000062 INF: ===================Camera #2 Frame #265===================
17-02-28 20:03:53.682 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:03:53.682 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:03:53.682 -08 000000077 INF: ===================Camera #0 Frame #268===================
17-02-28 20:03:53.713 -08 000000068 INF: Y Motor: Unshifted Position: 1215459
17-02-28 20:03:53.763 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:53.787 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:03:53.787 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:03:53.787 -08 000000062 INF: ===================Camera #2 Frame #271===================
17-02-28 20:03:53.835 -08 000000055 INF: FPGA: Recv TDIYWAIT
17-02-28 20:03:53.835 -08 000000030 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:03:53.837 -08 000000030 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:03:53.838 -08 000000025 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:03:53.838 -08 000000100 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:03:53.838 -08 000000025 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:03:53.838 -08 000000025 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:03:53.838 -08 000000025 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:03:53.838 -08 000000100 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:03:53.838 -08 000000025 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:03:53.838 -08 000000100 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:03:53.838 -08 000000100 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:03:53.839 -08 000000100 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:03:53.855 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:03:53.855 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:03:53.855 -08 000000077 INF: ===================Camera #0 Frame #272===================
17-02-28 20:03:53.868 -08 000000077 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:03:53.869 -08 000000077 INF: ===================CameraTDI Cleanup===================
17-02-28 20:03:53.887 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:54.027 -08 000000068 INF: Y Motor: Unshifted Position: 1013963
17-02-28 20:03:54.031 -08 000000077 INF: Camera #0 ReleaseBuffer
17-02-28 20:03:54.031 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:03:54.031 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:03:54.031 -08 000000062 INF: ===================Camera #2 Frame #272===================
17-02-28 20:03:54.031 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:03:54.034 -08 000000062 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:03:54.035 -08 000000062 INF: ===================CameraTDI Cleanup===================
17-02-28 20:03:54.064 -08 000000077 INF: ======================================
17-02-28 20:03:54.077 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:54.211 -08 000000081 INF: FPGA: Recv EX1MV
17-02-28 20:03:54.211 -08 000000081 INF: FPGA: Recv EX2MV
17-02-28 20:03:54.211 -08 000000100 INF: Excitation Filter 2: Moved 107 steps in 372.6487 ms
17-02-28 20:03:54.211 -08 000000100 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.7898 ms
17-02-28 20:03:54.211 -08 000000100 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.8632 ms
17-02-28 20:03:54.211 -08 000000025 INF: Excitation Filter 1: Moved 107 steps in 372.9012 ms
17-02-28 20:03:54.211 -08 000000025 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.1433 ms
17-02-28 20:03:54.211 -08 000000025 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.2205 ms
17-02-28 20:03:54.211 -08 000000100 INF: ======================================
17-02-28 20:03:54.212 -08 000000025 INF: ======================================
17-02-28 20:03:54.213 -08 000000068 INF: Y Motor: Unshifted Position: 990752
17-02-28 20:03:54.213 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:03:54.213 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:54.213 -08 000000030 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:03:54.214 -08 000000030 INF: ======================================
17-02-28 20:03:54.235 -08 000000062 INF: Camera #2 ReleaseBuffer
17-02-28 20:03:54.235 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:03:54.271 -08 000000062 INF: ======================================
17-02-28 20:03:54.272 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:03:54.273 -08 000000090 INF: ======================================
17-02-28 20:03:54.275 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:03:54.275 -08 000000068 INF: Y Motor: Moved to 14.9075 after 7878 ms
17-02-28 20:03:54.275 -08 000000068 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:03:54.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:54.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:03:54.337 -08 000000068 INF: Y Motor: Recv v 4097\r
17-02-28 20:03:54.337 -08 000000068 INF: Y Motor: Status After move finished OK:
17-02-28 20:03:54.337 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:54.399 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:03:54.399 -08 000000068 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:54.399 -08 000000068 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:03:54.461 -08 000000068 INF: Y Motor: Recv v 134217728\r
17-02-28 20:03:54.461 -08 000000068 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:03:54.461 -08 000000068 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:03:54.461 -08 000000068 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:03:54.523 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:03:54.523 -08 000000068 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:03:54.523 -08 000000068 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:03:54.523 -08 000000068 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:54.587 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:03:54.587 -08 000000068 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:03:54.587 -08 000000068 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:54.651 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:03:54.651 -08 000000068 INF: ======================================
17-02-28 20:03:54.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:54.653 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:54.654 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:54.654 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:03:54.710 -08 000000092 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:03:54.711 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:03:54.770 -08 000000094 INF: FPGA: Recv TDIYERD 1490753
17-02-28 20:03:54.770 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:03:54.835 -08 000000102 INF: FPGA: Recv ZADCR 33551
17-02-28 20:03:54.835 -08 000000042 INF: At scan end Y pos = 14.908 and Z pos = -0.128. Y moved -48.539 mm
17-02-28 20:03:54.835 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:03:54.897 -08 000000025 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:03:54.897 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:03:54.897 -08 000000042 INF: TDIScan finished after 11966.8377 ms
17-02-28 20:03:54.897 -08 000000042 INF: Image[0]: Y should trigger at 63.447 mm, 2nd row was at 64.356 mm (error = 0.909 mm)
17-02-28 20:03:54.897 -08 000000042 INF: Image[2]: Y should trigger at 63.447 mm, 2nd row was at 64.356 mm (error = 0.909 mm)
17-02-28 20:03:54.899 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:54.931 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.608 um
17-02-28 20:03:54.932 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:54.933 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:03:54.961 -08 000000051 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:03:54.962 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:54.963 -08 000000034 INF: ===================Dither Clean Up Command===================
17-02-28 20:03:54.963 -08 000000040 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:03:54.963 -08 000000099 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:03:54.963 -08 000000080 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:03:54.963 -08 000000080 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:03:54.963 -08 000000040 INF: ======================================
17-02-28 20:03:54.963 -08 000000080 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:03:54.964 -08 000000099 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:03:54.964 -08 000000099 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:03:54.964 -08 000000092 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:03:54.964 -08 000000098 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:03:54.964 -08 000000098 INF: ======================================
17-02-28 20:03:54.965 -08 000000092 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:03:55.021 -08 000000087 INF: FPGA: Recv ZSTEP 
17-02-28 20:03:55.021 -08 000000087 INF: FPGA: Recv ZSEL 
17-02-28 20:03:55.021 -08 000000092 INF: FPGA: Xmit ZDACW 39420\n
17-02-28 20:03:55.021 -08 000000080 INF: ======================================
17-02-28 20:03:55.023 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:03:55.023 -08 000000099 INF: ======================================
17-02-28 20:03:55.085 -08 000000078 INF: FPGA: Recv ZDACW 
17-02-28 20:03:55.086 -08 000000092 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:03:55.086 -08 000000092 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:03:55.145 -08 000000033 INF: FPGA: Recv TDIBB
17-02-28 20:03:55.145 -08 000000092 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:03:55.146 -08 000000092 INF: ======================================
17-02-28 20:03:55.147 -08 000000034 INF: ======================================
17-02-28 20:03:55.148 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.149 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:03:55.149 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:03:55.151 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:03:55.151 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:03:55.152 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:03:55.152 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:03:55.152 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:03:55.174 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:03:55.175 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:55.175 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:03:55.175 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.175 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:03:55.175 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:03:55.176 -08 000000042 INF: Transformed XStagePosition from 72.50464 mm to 72.4818686712533 mm.
17-02-28 20:03:55.220 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5555043554641 mm.
17-02-28 20:03:55.220 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3555043554641 mm.
17-02-28 20:03:55.220 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4462543554641 mm.
17-02-28 20:03:55.222 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.223 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:03:55.223 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.223 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -150.4 um, section = B_1
17-02-28 20:03:55.224 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:03:55.225 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:03:55.228 -08 000000055 INF: ===================MoveEmissionFilters===================
17-02-28 20:03:55.242 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:03:55.243 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:03:55.246 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:03:55.247 -08 000000085 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:03:55.247 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1102 Request: {"Cycle":2,"Lane":2,"Tile":1102,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF234","HCSMMF257","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.247 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:03:55.248 -08 000000078 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:03:55.248 -08 000000085 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:03:55.248 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:03:55.249 -08 000000068 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:03:55.249 -08 000000065 INF: ===================Move X,Y===================
17-02-28 20:03:55.250 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:03:55.250 -08 000000068 INF: ======================================
17-02-28 20:03:55.250 -08 000000065 INF: ===================Move X,Y, Parallel===================
17-02-28 20:03:55.251 -08 000000067 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:03:55.251 -08 000000070 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:03:55.252 -08 000000068 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:03:55.252 -08 000000067 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:03:55.252 -08 000000070 INF: ======================================
17-02-28 20:03:55.252 -08 000000068 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:03:55.252 -08 000000068 INF: ======================================
17-02-28 20:03:55.254 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:03:55.254 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:03:55.254 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:03:55.254 -08 000000068 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:03:55.255 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:03:55.255 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:55.255 -08 000000068 INF: ======================================
17-02-28 20:03:55.255 -08 000000087 INF: ======================================
17-02-28 20:03:55.255 -08 000000102 INF: ===================Move X Motor without settling===================
17-02-28 20:03:55.255 -08 000000093 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:03:55.256 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:03:55.256 -08 000000102 INF: X Motor: Xmit PR VM\n
17-02-28 20:03:55.256 -08 000000070 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:03:55.256 -08 000000070 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:03:55.256 -08 000000044 INF: ===================Move Y Motor without settling===================
17-02-28 20:03:55.257 -08 000000084 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:03:55.257 -08 000000093 INF: ======================================
17-02-28 20:03:55.257 -08 000000085 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:03:55.257 -08 000000070 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:03:55.257 -08 000000087 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:03:55.257 -08 000000044 INF: Y Motor: Moving to 64.5555 mm @25.000 mm/sec, started at 14.9075 mm
17-02-28 20:03:55.257 -08 000000087 INF: ======================================
17-02-28 20:03:55.257 -08 000000044 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:03:55.257 -08 000000068 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:03:55.257 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:55.258 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:03:55.258 -08 000000068 INF: ======================================
17-02-28 20:03:55.258 -08 000000085 INF: ======================================
17-02-28 20:03:55.258 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:03:55.260 -08 000000084 INF: ======================================
17-02-28 20:03:55.261 -08 000000067 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:03:55.262 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:03:55.262 -08 000000067 INF: ======================================
17-02-28 20:03:55.263 -08 000000073 INF: ======================================
17-02-28 20:03:55.264 -08 000000055 INF: ======================================
17-02-28 20:03:55.273 -08 000000029 INF: FPGA: Recv ZSEL 
17-02-28 20:03:55.274 -08 000000070 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:03:55.275 -08 000000070 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:03:55.283 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:55.283 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:03:55.335 -08 000000029 INF: FPGA: Recv TDIBB
17-02-28 20:03:55.335 -08 000000070 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:03:55.337 -08 000000102 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:03:55.337 -08 000000102 INF: X Motor: Xmit PR VI\n
17-02-28 20:03:55.337 -08 000000070 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:03:55.337 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:55.339 -08 000000070 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:03:55.339 -08 000000070 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:03:55.339 -08 000000070 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:03:55.340 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:03:55.340 -08 000000044 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:03:55.340 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:55.357 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1108 Request: {"Cycle":2,"Lane":2,"Tile":1108,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF264","HCSMMF282","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.372 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1107 Request: {"Cycle":2,"Lane":2,"Tile":1107,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF275","HCSMMF212","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.374 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1103 Request: {"Cycle":2,"Lane":2,"Tile":1103,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF254","HCSMMF199","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.374 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1106 Request: {"Cycle":2,"Lane":2,"Tile":1106,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF202","HCSMMF183","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.375 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1113 Request: {"Cycle":2,"Lane":2,"Tile":1113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF238","HCSMMF250","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.376 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1109 Request: {"Cycle":2,"Lane":2,"Tile":1109,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF208","HCSMMF197","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.378 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1112 Request: {"Cycle":2,"Lane":2,"Tile":1112,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF278","HCSMMF283","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.379 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1101 Request: {"Cycle":2,"Lane":2,"Tile":1101,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF243","HCSMMF178","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.379 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1114 Request: {"Cycle":2,"Lane":2,"Tile":1114,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF220","HCSMMF248","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.380 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1110 Request: {"Cycle":2,"Lane":2,"Tile":1110,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF276","HCSMMF285","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.381 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1105 Request: {"Cycle":2,"Lane":2,"Tile":1105,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF265","HCSMMF211","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.382 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1104 Request: {"Cycle":2,"Lane":2,"Tile":1104,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF190","HCSMMF196","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.383 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1115 Request: {"Cycle":2,"Lane":2,"Tile":1115,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF259","HCSMMF206","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.383 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1111 Request: {"Cycle":2,"Lane":2,"Tile":1111,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF218","HCSMMF252","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.384 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1117 Request: {"Cycle":2,"Lane":2,"Tile":1117,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF267","HCSMMF233","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.385 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1118 Request: {"Cycle":2,"Lane":2,"Tile":1118,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF270","HCSMMF232","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.385 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1119 Request: {"Cycle":2,"Lane":2,"Tile":1119,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF239","HCSMMF200","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.386 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1121 Request: {"Cycle":2,"Lane":2,"Tile":1121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF205","HCSMMF235","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.387 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1116 Request: {"Cycle":2,"Lane":2,"Tile":1116,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF207","HCSMMF244","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.388 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1120 Request: {"Cycle":2,"Lane":2,"Tile":1120,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF279","HCSMMF213","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.390 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1124 Request: {"Cycle":2,"Lane":2,"Tile":1124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF186","HCSMMF249","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.391 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1125 Request: {"Cycle":2,"Lane":2,"Tile":1125,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF222","HCSMMF193","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.392 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1128 Request: {"Cycle":2,"Lane":2,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF180","HCSMMF228","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.393 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1126 Request: {"Cycle":2,"Lane":2,"Tile":1126,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF281","HCSMMF195","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.394 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1127 Request: {"Cycle":2,"Lane":2,"Tile":1127,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF203","HCSMMF188","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.394 -08 000000092 INF: FPGA: Recv ZSTEP 
17-02-28 20:03:55.394 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:55.395 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1122 Request: {"Cycle":2,"Lane":2,"Tile":1122,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF221","HCSMMF277","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.396 -08 000000102 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:03:55.396 -08 000000102 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:03:55.396 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:03:55.396 -08 000000102 INF: X Motor: Moving to 72.4819 mm @15.000 mm/sec, started at 71.3804 mm
17-02-28 20:03:55.396 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1123 Request: {"Cycle":2,"Lane":2,"Tile":1123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF245","HCSMMF261","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.396 -08 000000102 INF: X Motor: Xmit MA 5522\n
17-02-28 20:03:55.396 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:55.396 -08 000000070 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:03:55.396 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:55.398 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.398 -08 000000070 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:03:55.398 -08 000000070 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:03:55.398 -08 000000070 INF: Z Motor: Arming to move to -0.1104 mm
17-02-28 20:03:55.398 -08 000000070 INF: FPGA: Xmit ZYT 6435550 4\n
17-02-28 20:03:55.404 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:03:55.459 -08 000000085 INF: FPGA: Recv ZYT 
17-02-28 20:03:55.459 -08 000000070 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490752 enc / 14.908 mm / ) = 6435550 enc / 64.356 mm
17-02-28 20:03:55.459 -08 000000070 INF: FPGA: Xmit ZARM 28934\n
17-02-28 20:03:55.461 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:03:55.461 -08 000000044 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:55.461 -08 000000102 INF: X Motor: Recv MA 5522\r\n>
17-02-28 20:03:55.461 -08 000000102 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:03:55.461 -08 000000044 INF: Y Motor: Set target position to 5955550 encoder counts
17-02-28 20:03:55.461 -08 000000044 INF: Y Motor: Xmit s r0xca 5955550\r
17-02-28 20:03:55.500 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.500 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:03:55.520 -08 000000092 INF: FPGA: Recv ZARM
17-02-28 20:03:55.520 -08 000000070 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.7627 ms
17-02-28 20:03:55.520 -08 000000070 INF: Z Motor: ArmAbsStepped took 121.4482 ms
17-02-28 20:03:55.520 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:55.521 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:03:55.521 -08 000000044 INF: Y Motor: Start the move command
17-02-28 20:03:55.521 -08 000000044 INF: Y Motor: Xmit t 1\r
17-02-28 20:03:55.521 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:03:55.523 -08 000000070 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:03:55.523 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:03:55.525 -08 000000070 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:03:55.525 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:03:55.526 -08 000000070 INF: ======================================
17-02-28 20:03:55.537 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.543 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:03:55.583 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:03:55.583 -08 000000044 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:03:55.583 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:55.644 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.651 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:03:55.710 -08 000000044 INF: Y Motor: Unshifted Position: 1076102
17-02-28 20:03:55.743 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.749 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:03:55.760 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:55.846 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.851 -08 000000045 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:03:55.851 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:03:55.851 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:03:55.866 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:03:55.868 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:03:55.884 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.020 -08 000000044 INF: Y Motor: Unshifted Position: 1779914
17-02-28 20:03:56.098 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.098 -08 000000083 INF: RunCopyService queue size at 2/28/2017 8:03:56 PM is 2
17-02-28 20:03:56.103 -08 000000102 INF: X Motor: Xmit PR ER\n
17-02-28 20:03:56.163 -08 000000102 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:03:56.163 -08 000000102 INF: X Motor: Moved to 72.4814 after 701 ms
17-02-28 20:03:56.164 -08 000000102 INF: ======================================
17-02-28 20:03:56.167 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:03:56.213 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:56.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:03:56.349 -08 000000044 INF: Y Motor: Unshifted Position: 2600783
17-02-28 20:03:56.399 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.466 -08 000000045 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:03:56.466 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:03:56.466 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:03:56.481 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:03:56.483 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:03:56.484 -08 000000045 INF: ======================================
17-02-28 20:03:56.485 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:03:56.486 -08 000000078 INF: ======================================
17-02-28 20:03:56.528 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.663 -08 000000044 INF: Y Motor: Unshifted Position: 3379044
17-02-28 20:03:56.713 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.837 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.973 -08 000000044 INF: Y Motor: Unshifted Position: 4161587
17-02-28 20:03:57.023 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:57.150 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:57.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:57.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:03:57.288 -08 000000044 INF: Y Motor: Unshifted Position: 4944936
17-02-28 20:03:57.338 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:57.460 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:57.597 -08 000000044 INF: Y Motor: Unshifted Position: 5716971
17-02-28 20:03:57.647 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:57.774 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:57.910 -08 000000044 INF: Y Motor: Unshifted Position: 5955552
17-02-28 20:03:57.910 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:03:57.910 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:57.972 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:03:57.972 -08 000000044 INF: Y Motor: Moved to 64.5555 after 2388 ms
17-02-28 20:03:57.972 -08 000000044 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:03:58.036 -08 000000044 INF: Y Motor: Recv v 4096\r
17-02-28 20:03:58.036 -08 000000044 INF: Y Motor: Status After move finished OK:
17-02-28 20:03:58.036 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:58.098 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:03:58.098 -08 000000044 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:58.098 -08 000000044 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:03:58.158 -08 000000044 INF: Y Motor: Recv v 402653184\r
17-02-28 20:03:58.158 -08 000000044 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:03:58.158 -08 000000044 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:03:58.158 -08 000000044 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:03:58.223 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:03:58.223 -08 000000044 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:03:58.223 -08 000000044 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:03:58.223 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:58.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:58.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:58.277 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:03:58.278 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:58.285 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:03:58.285 -08 000000044 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:03:58.285 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:58.349 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:03:58.349 -08 000000044 INF: ======================================
17-02-28 20:03:58.350 -08 000000065 INF: ===================Move X,Y===================
17-02-28 20:03:58.351 -08 000000065 INF: ======================================
17-02-28 20:03:58.352 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:03:58.353 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:58.353 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:03:58.353 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:03:58.377 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:03:58.409 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:03:58.409 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:03:58.469 -08 000000067 INF: FPGA: Recv ZFREQCL
17-02-28 20:03:58.469 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:03:58.470 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF)
17-02-28 20:03:58.470 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:58.470 -08 000000018 INF: Current Position of Pump is: 18240
17-02-28 20:03:58.470 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:03:58.531 -08 000000100 INF: FPGA: Recv TDIYERD 6455551
17-02-28 20:03:58.531 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455551 counts (64.556 mm)
17-02-28 20:03:58.532 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:03:58.532 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:03:58.533 -08 000000080 INF: ===================TDI FPGA Arm===================
17-02-28 20:03:58.533 -08 000000058 INF: ===================Set YMotor gains for scans===================
17-02-28 20:03:58.533 -08 000000058 INF: ======================================
17-02-28 20:03:58.534 -08 000000080 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:03:58.534 -08 000000080 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:03:58.534 -08 000000080 INF: FPGA: Xmit TDIYPOS 6344625\n
17-02-28 20:03:58.570 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:03:58.593 -08 000000055 INF: FPGA: Recv TDIYPOS
17-02-28 20:03:58.593 -08 000000080 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:03:58.595 -08 000000080 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:03:58.595 -08 000000080 INF: FPGA: Xmit TDIYARM3 139264 6435550 1 1\n
17-02-28 20:03:58.658 -08 000000097 INF: FPGA: Recv TDIYARM3
17-02-28 20:03:58.658 -08 000000080 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:03:58.659 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF)
17-02-28 20:03:58.659 -08 000000018 INF: Current Position of Pump is: 18240
17-02-28 20:03:58.659 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:03:58.659 -08 000000080 INF: ===================TDI FPGA Arm===================
17-02-28 20:03:58.660 -08 000000080 INF: ======================================
17-02-28 20:03:58.661 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:03:58.662 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:58.662 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:58.663 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:58.663 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:58.664 -08 000000031 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:03:58.664 -08 000000065 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:03:58.664 -08 000000031 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:03:58.664 -08 000000031 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:03:58.664 -08 000000031 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:03:58.664 -08 000000065 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:03:58.664 -08 000000031 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:03:58.664 -08 000000065 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:03:58.664 -08 000000065 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:03:58.667 -08 000000065 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:03:58.759 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD18240R\r
17-02-28 20:03:58.845 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:58.945 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:58.969 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:59.031 -08 000000098 INF: FPGA: Recv EX2MV
17-02-28 20:03:59.031 -08 000000098 INF: FPGA: Recv EX1MV
17-02-28 20:03:59.031 -08 000000065 INF: Excitation Filter 1: Moved -107 steps in 366.4242 ms
17-02-28 20:03:59.031 -08 000000031 INF: Excitation Filter 2: Moved -107 steps in 366.6136 ms
17-02-28 20:03:59.031 -08 000000065 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.6208 ms
17-02-28 20:03:59.031 -08 000000065 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.7265 ms
17-02-28 20:03:59.031 -08 000000031 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.7515 ms
17-02-28 20:03:59.031 -08 000000031 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.9295 ms
17-02-28 20:03:59.031 -08 000000065 INF: ======================================
17-02-28 20:03:59.031 -08 000000031 INF: ======================================
17-02-28 20:03:59.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:59.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:59.035 -08 000000070 INF: ===================Camera TDI===================
17-02-28 20:03:59.035 -08 000000068 INF: ===================FPGA Z Wait===================
17-02-28 20:03:59.035 -08 000000030 INF: ===================Move Y Motor without settling===================
17-02-28 20:03:59.035 -08 000000030 INF: Y Motor: Moving to 14.9072 mm @6.500 mm/sec, started at 64.5555 mm
17-02-28 20:03:59.035 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:03:59.035 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:03:59.035 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:59.035 -08 000000070 INF: ===================Camera TDI, Parallel===================
17-02-28 20:03:59.036 -08 000000032 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:03:59.036 -08 000000068 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:03:59.036 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:03:59.036 -08 000000067 INF: ===================Camera TDI===================
17-02-28 20:03:59.037 -08 000000032 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:03:59.038 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:59.038 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:59.038 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:59.038 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:59.094 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:03:59.094 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:03:59.094 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:59.159 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:03:59.159 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:59.188 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:59.188 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:59.189 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:59.189 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:59.219 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:59.221 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:03:59.221 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:59.221 -08 000000030 INF: Y Motor: Set target position to 990717 encoder counts
17-02-28 20:03:59.221 -08 000000030 INF: Y Motor: Xmit s r0xca 990717\r
17-02-28 20:03:59.283 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:03:59.283 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:59.283 -08 000000030 INF: Y Motor: Start the move command
17-02-28 20:03:59.283 -08 000000030 INF: Y Motor: Xmit t 1\r
17-02-28 20:03:59.338 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:59.338 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:59.339 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:59.339 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:59.345 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:03:59.345 -08 000000030 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:03:59.345 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:59.406 -08 000000100 INF: FPGA: Recv ZWAIT 
17-02-28 20:03:59.406 -08 000000068 INF: ======================================
17-02-28 20:03:59.469 -08 000000030 INF: Y Motor: Unshifted Position: 5893692
17-02-28 20:03:59.488 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:03:59.488 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:03:59.488 -08 000000073 INF: ===================Camera #0 Frame #5===================
17-02-28 20:03:59.489 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:03:59.489 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:03:59.489 -08 000000067 INF: ===================Camera #2 Frame #5===================
17-02-28 20:03:59.519 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:59.533 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:59.593 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:59.644 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:59.653 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:03:59.653 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:03:59.653 -08 000000073 INF: ===================Camera #0 Frame #11===================
17-02-28 20:03:59.656 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:03:59.656 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:03:59.656 -08 000000067 INF: ===================Camera #2 Frame #11===================
17-02-28 20:03:59.783 -08 000000030 INF: Y Motor: Unshifted Position: 5691544
17-02-28 20:03:59.821 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:03:59.821 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:03:59.821 -08 000000073 INF: ===================Camera #0 Frame #17===================
17-02-28 20:03:59.829 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:03:59.829 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:03:59.829 -08 000000067 INF: ===================Camera #2 Frame #17===================
17-02-28 20:03:59.833 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:59.843 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:59.906 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:59.959 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:59.989 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:03:59.989 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:03:59.989 -08 000000073 INF: ===================Camera #0 Frame #23===================
17-02-28 20:04:00.001 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:00.001 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:00.001 -08 000000067 INF: ===================Camera #2 Frame #23===================
17-02-28 20:04:00.093 -08 000000030 INF: Y Motor: Unshifted Position: 5487240
17-02-28 20:04:00.143 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:00.156 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:00.157 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:04:00.157 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:04:00.157 -08 000000073 INF: ===================Camera #0 Frame #29===================
17-02-28 20:04:00.172 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:04:00.172 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:04:00.172 -08 000000067 INF: ===================Camera #2 Frame #30===================
17-02-28 20:04:00.216 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:00.267 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:00.325 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:04:00.325 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:04:00.325 -08 000000073 INF: ===================Camera #0 Frame #35===================
17-02-28 20:04:00.346 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:04:00.346 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:04:00.346 -08 000000067 INF: ===================Camera #2 Frame #36===================
17-02-28 20:04:00.406 -08 000000030 INF: Y Motor: Unshifted Position: 5284434
17-02-28 20:04:00.456 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:00.466 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:00.494 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:04:00.494 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:04:00.494 -08 000000073 INF: ===================Camera #0 Frame #42===================
17-02-28 20:04:00.518 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:04:00.518 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:04:00.518 -08 000000067 INF: ===================Camera #2 Frame #42===================
17-02-28 20:04:00.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:00.582 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:00.667 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:04:00.667 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:04:00.667 -08 000000073 INF: ===================Camera #0 Frame #48===================
17-02-28 20:04:00.688 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:04:00.688 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:04:00.688 -08 000000067 INF: ===================Camera #2 Frame #49===================
17-02-28 20:04:00.719 -08 000000030 INF: Y Motor: Unshifted Position: 5082710
17-02-28 20:04:00.769 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:00.781 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:00.837 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:04:00.837 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:04:00.837 -08 000000073 INF: ===================Camera #0 Frame #54===================
17-02-28 20:04:00.842 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:00.865 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:04:00.865 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:04:00.865 -08 000000067 INF: ===================Camera #2 Frame #55===================
17-02-28 20:04:00.893 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.007 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:04:01.007 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:04:01.007 -08 000000073 INF: ===================Camera #0 Frame #60===================
17-02-28 20:04:01.030 -08 000000030 INF: Y Motor: Unshifted Position: 4879264
17-02-28 20:04:01.037 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:04:01.037 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:04:01.037 -08 000000067 INF: ===================Camera #2 Frame #62===================
17-02-28 20:04:01.080 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.092 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:01.153 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:01.177 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:04:01.177 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:04:01.177 -08 000000073 INF: ===================Camera #0 Frame #67===================
17-02-28 20:04:01.204 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.213 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:04:01.213 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:04:01.213 -08 000000067 INF: ===================Camera #2 Frame #68===================
17-02-28 20:04:01.343 -08 000000030 INF: Y Motor: Unshifted Position: 4676896
17-02-28 20:04:01.350 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:04:01.350 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:04:01.350 -08 000000073 INF: ===================Camera #0 Frame #73===================
17-02-28 20:04:01.384 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:04:01.384 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:04:01.384 -08 000000067 INF: ===================Camera #2 Frame #74===================
17-02-28 20:04:01.393 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.403 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:01.468 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:01.468 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:04:01.468 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:04:01.518 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:04:01.518 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:04:01.518 -08 000000073 INF: ===================Camera #0 Frame #79===================
17-02-28 20:04:01.519 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.558 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:04:01.558 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:04:01.558 -08 000000067 INF: ===================Camera #2 Frame #81===================
17-02-28 20:04:01.653 -08 000000030 INF: Y Motor: Unshifted Position: 4471915
17-02-28 20:04:01.688 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:04:01.688 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:04:01.688 -08 000000073 INF: ===================Camera #0 Frame #86===================
17-02-28 20:04:01.703 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.735 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:04:01.735 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:04:01.735 -08 000000067 INF: ===================Camera #2 Frame #87===================
17-02-28 20:04:01.827 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.861 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:04:01.861 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:04:01.861 -08 000000073 INF: ===================Camera #0 Frame #92===================
17-02-28 20:04:01.905 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:04:01.905 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:04:01.905 -08 000000067 INF: ===================Camera #2 Frame #94===================
17-02-28 20:04:01.966 -08 000000030 INF: Y Motor: Unshifted Position: 4269771
17-02-28 20:04:02.016 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.031 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:04:02.031 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:04:02.031 -08 000000073 INF: ===================Camera #0 Frame #98===================
17-02-28 20:04:02.082 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:04:02.082 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:04:02.082 -08 000000067 INF: ===================Camera #2 Frame #100===================
17-02-28 20:04:02.140 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.201 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:04:02.201 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:04:02.201 -08 000000073 INF: ===================Camera #0 Frame #104===================
17-02-28 20:04:02.255 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:04:02.255 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:04:02.255 -08 000000067 INF: ===================Camera #2 Frame #106===================
17-02-28 20:04:02.279 -08 000000030 INF: Y Motor: Unshifted Position: 4068266
17-02-28 20:04:02.329 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.371 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:04:02.371 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:04:02.371 -08 000000073 INF: ===================Camera #0 Frame #111===================
17-02-28 20:04:02.429 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:04:02.429 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:04:02.429 -08 000000067 INF: ===================Camera #2 Frame #113===================
17-02-28 20:04:02.454 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.544 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:04:02.544 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:04:02.544 -08 000000073 INF: ===================Camera #0 Frame #117===================
17-02-28 20:04:02.568 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:04:02.589 -08 000000030 INF: Y Motor: Unshifted Position: 3864599
17-02-28 20:04:02.606 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:04:02.606 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:04:02.606 -08 000000067 INF: ===================Camera #2 Frame #119===================
17-02-28 20:04:02.639 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.650 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:02.714 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:04:02.714 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:04:02.714 -08 000000073 INF: ===================Camera #0 Frame #123===================
17-02-28 20:04:02.750 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:02.763 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.777 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:02.779 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:04:02.779 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:04:02.779 -08 000000067 INF: ===================Camera #2 Frame #126===================
17-02-28 20:04:02.883 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:04:02.883 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:04:02.883 -08 000000073 INF: ===================Camera #0 Frame #130===================
17-02-28 20:04:02.903 -08 000000030 INF: Y Motor: Unshifted Position: 3660930
17-02-28 20:04:02.953 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.956 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:04:02.956 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:04:02.956 -08 000000067 INF: ===================Camera #2 Frame #132===================
17-02-28 20:04:03.027 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:03.054 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:04:03.054 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:04:03.054 -08 000000073 INF: ===================Camera #0 Frame #136===================
17-02-28 20:04:03.076 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:03.087 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:03.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:03.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-02-28 20:04:03.127 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:04:03.127 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:04:03.127 -08 000000067 INF: ===================Camera #2 Frame #139===================
17-02-28 20:04:03.212 -08 000000030 INF: Y Motor: Unshifted Position: 3459438
17-02-28 20:04:03.222 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:04:03.222 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:04:03.222 -08 000000073 INF: ===================Camera #0 Frame #142===================
17-02-28 20:04:03.262 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:03.305 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:04:03.305 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:04:03.305 -08 000000067 INF: ===================Camera #2 Frame #145===================
17-02-28 20:04:03.389 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:03.392 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:04:03.392 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:04:03.392 -08 000000073 INF: ===================Camera #0 Frame #148===================
17-02-28 20:04:03.478 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:04:03.478 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:04:03.478 -08 000000067 INF: ===================Camera #2 Frame #151===================
17-02-28 20:04:03.527 -08 000000030 INF: Y Motor: Unshifted Position: 3255988
17-02-28 20:04:03.562 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:04:03.562 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:04:03.562 -08 000000073 INF: ===================Camera #0 Frame #155===================
17-02-28 20:04:03.577 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:03.651 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:04:03.651 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:04:03.651 -08 000000067 INF: ===================Camera #2 Frame #158===================
17-02-28 20:04:03.699 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:03.735 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:04:03.735 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:04:03.735 -08 000000073 INF: ===================Camera #0 Frame #161===================
17-02-28 20:04:03.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:03.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:03.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:03.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:04:03.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:04:03.777 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°, FC temperature to 55°===================
17-02-28 20:04:03.828 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:04:03.828 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:04:03.828 -08 000000067 INF: ===================Camera #2 Frame #164===================
17-02-28 20:04:03.838 -08 000000030 INF: Y Motor: Unshifted Position: 3051021
17-02-28 20:04:03.888 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:03.905 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:04:03.905 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:04:03.905 -08 000000073 INF: ===================Camera #0 Frame #167===================
17-02-28 20:04:04.002 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:04:04.002 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:04:04.002 -08 000000067 INF: ===================Camera #2 Frame #171===================
17-02-28 20:04:04.012 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.075 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:04:04.075 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:04:04.075 -08 000000073 INF: ===================Camera #0 Frame #173===================
17-02-28 20:04:04.145 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:04:04.145 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:04:04.146 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:04:04.147 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:04:04.147 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:04.147 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:04.148 -08 000000030 INF: Y Motor: Unshifted Position: 2850835
17-02-28 20:04:04.148 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:04.180 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:04:04.180 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:04:04.180 -08 000000067 INF: ===================Camera #2 Frame #177===================
17-02-28 20:04:04.187 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:04.198 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.245 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:04:04.245 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:04:04.245 -08 000000073 INF: ===================Camera #0 Frame #180===================
17-02-28 20:04:04.274 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:04.274 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Selecting Reagent HCM (7)===================
17-02-28 20:04:04.274 -08 000000018 INF: Valve A1: Go to position 7
17-02-28 20:04:04.274 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:04:04.325 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.336 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 8\r
17-02-28 20:04:04.336 -08 000000018 INF: Valve A1: 68.482 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:04:04.336 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 8 to 7
17-02-28 20:04:04.336 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC7\r
17-02-28 20:04:04.336 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:04:04.336 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:04:04.354 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184.
17-02-28 20:04:04.354 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184
17-02-28 20:04:04.354 -08 000000067 INF: ===================Camera #2 Frame #184===================
17-02-28 20:04:04.418 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:04:04.418 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:04:04.418 -08 000000073 INF: ===================Camera #0 Frame #186===================
17-02-28 20:04:04.461 -08 000000030 INF: Y Motor: Unshifted Position: 2647163
17-02-28 20:04:04.511 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.531 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:04:04.531 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:04:04.531 -08 000000067 INF: ===================Camera #2 Frame #190===================
17-02-28 20:04:04.585 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 7\r
17-02-28 20:04:04.585 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:04.585 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-02-28 20:04:04.588 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:04:04.588 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:04:04.588 -08 000000073 INF: ===================Camera #0 Frame #192===================
17-02-28 20:04:04.635 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.705 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 196, frameCount = 197.
17-02-28 20:04:04.705 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 197
17-02-28 20:04:04.705 -08 000000067 INF: ===================Camera #2 Frame #197===================
17-02-28 20:04:04.757 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:04:04.757 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:04:04.757 -08 000000073 INF: ===================Camera #0 Frame #199===================
17-02-28 20:04:04.774 -08 000000030 INF: Y Motor: Unshifted Position: 2443714
17-02-28 20:04:04.824 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.883 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 202, frameCount = 203.
17-02-28 20:04:04.883 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 203
17-02-28 20:04:04.883 -08 000000067 INF: ===================Camera #2 Frame #203===================
17-02-28 20:04:04.930 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:04:04.930 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:04:04.930 -08 000000073 INF: ===================Camera #0 Frame #205===================
17-02-28 20:04:04.948 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:04.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:04.957 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:05.021 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:05.029 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 7, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 62, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:04:05.058 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210.
17-02-28 20:04:05.058 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210
17-02-28 20:04:05.058 -08 000000067 INF: ===================Camera #2 Frame #210===================
17-02-28 20:04:05.084 -08 000000030 INF: Y Motor: Unshifted Position: 2242001
17-02-28 20:04:05.100 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:04:05.100 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:04:05.100 -08 000000073 INF: ===================Camera #0 Frame #211===================
17-02-28 20:04:05.121 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:04:05.134 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:05.210 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:04:05.210 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:04:05.235 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 215, frameCount = 216.
17-02-28 20:04:05.235 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 216
17-02-28 20:04:05.235 -08 000000067 INF: ===================Camera #2 Frame #216===================
17-02-28 20:04:05.261 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:05.269 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:04:05.269 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:04:05.269 -08 000000073 INF: ===================Camera #0 Frame #217===================
17-02-28 20:04:05.310 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:04:05.396 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:05.397 -08 000000030 INF: Y Motor: Unshifted Position: 2038334
17-02-28 20:04:05.408 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 221, frameCount = 222.
17-02-28 20:04:05.408 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 222
17-02-28 20:04:05.408 -08 000000067 INF: ===================Camera #2 Frame #222===================
17-02-28 20:04:05.439 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:04:05.439 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:04:05.439 -08 000000073 INF: ===================Camera #0 Frame #224===================
17-02-28 20:04:05.447 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:05.496 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:05.571 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:05.580 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 228, frameCount = 229.
17-02-28 20:04:05.580 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 229
17-02-28 20:04:05.580 -08 000000067 INF: ===================Camera #2 Frame #229===================
17-02-28 20:04:05.585 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:05.612 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:04:05.612 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:04:05.612 -08 000000073 INF: ===================Camera #0 Frame #230===================
17-02-28 20:04:05.710 -08 000000030 INF: Y Motor: Unshifted Position: 1836186
17-02-28 20:04:05.756 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 234, frameCount = 235.
17-02-28 20:04:05.756 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 235
17-02-28 20:04:05.756 -08 000000067 INF: ===================Camera #2 Frame #235===================
17-02-28 20:04:05.760 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:05.782 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:04:05.782 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:04:05.782 -08 000000073 INF: ===================Camera #0 Frame #236===================
17-02-28 20:04:05.835 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:05.885 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:05.896 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:05.930 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:04:05.930 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:04:05.930 -08 000000067 INF: ===================Camera #2 Frame #242===================
17-02-28 20:04:05.952 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:04:05.952 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:04:05.952 -08 000000073 INF: ===================Camera #0 Frame #243===================
17-02-28 20:04:05.996 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:04:06.021 -08 000000030 INF: Y Motor: Unshifted Position: 1632511
17-02-28 20:04:06.071 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:06.082 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:06.106 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:04:06.106 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:04:06.106 -08 000000067 INF: ===================Camera #2 Frame #248===================
17-02-28 20:04:06.125 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:04:06.125 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:04:06.125 -08 000000073 INF: ===================Camera #0 Frame #249===================
17-02-28 20:04:06.183 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:06.196 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:06.272 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:06.272 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-02-28 20:04:06.278 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 253, frameCount = 254.
17-02-28 20:04:06.278 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 254
17-02-28 20:04:06.278 -08 000000067 INF: ===================Camera #2 Frame #254===================
17-02-28 20:04:06.296 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:04:06.296 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:04:06.296 -08 000000073 INF: ===================Camera #0 Frame #255===================
17-02-28 20:04:06.333 -08 000000030 INF: Y Motor: Unshifted Position: 1429062
17-02-28 20:04:06.372 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP11904R\r
17-02-28 20:04:06.383 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:06.451 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:04:06.451 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:04:06.451 -08 000000067 INF: ===================Camera #2 Frame #261===================
17-02-28 20:04:06.459 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:06.466 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:04:06.466 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:04:06.466 -08 000000073 INF: ===================Camera #0 Frame #261===================
17-02-28 20:04:06.510 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:06.559 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:06.627 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:04:06.627 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:04:06.627 -08 000000067 INF: ===================Camera #2 Frame #267===================
17-02-28 20:04:06.635 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:04:06.635 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:04:06.635 -08 000000073 INF: ===================Camera #0 Frame #268===================
17-02-28 20:04:06.644 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:06.645 -08 000000030 INF: Y Motor: Unshifted Position: 1226679
17-02-28 20:04:06.695 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:06.770 -08 000000025 INF: FPGA: Recv TDIYWAIT
17-02-28 20:04:06.770 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:06.772 -08 000000032 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:04:06.773 -08 000000077 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:04:06.773 -08 000000097 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:04:06.773 -08 000000077 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:04:06.773 -08 000000077 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:04:06.773 -08 000000097 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:04:06.773 -08 000000097 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:04:06.773 -08 000000097 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:04:06.773 -08 000000077 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:04:06.773 -08 000000097 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:04:06.774 -08 000000077 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:04:06.800 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:04:06.800 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:04:06.800 -08 000000067 INF: ===================Camera #2 Frame #272===================
17-02-28 20:04:06.808 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:04:06.808 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:04:06.808 -08 000000073 INF: ===================Camera #0 Frame #272===================
17-02-28 20:04:06.818 -08 000000067 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:04:06.820 -08 000000067 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:06.821 -08 000000073 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:04:06.821 -08 000000073 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:06.822 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:06.894 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:06.958 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:06.959 -08 000000030 INF: Y Motor: Unshifted Position: 1023242
17-02-28 20:04:07.004 -08 000000067 INF: Camera #2 ReleaseBuffer
17-02-28 20:04:07.004 -08 000000067 INF: ===================Camera TDI===================
17-02-28 20:04:07.009 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:07.040 -08 000000067 INF: ======================================
17-02-28 20:04:07.136 -08 000000073 INF: Camera #0 ReleaseBuffer
17-02-28 20:04:07.136 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:04:07.143 -08 000000069 INF: FPGA: Recv EX2MV
17-02-28 20:04:07.143 -08 000000069 INF: FPGA: Recv EX1MV
17-02-28 20:04:07.143 -08 000000097 INF: Excitation Filter 2: Moved 107 steps in 369.9743 ms
17-02-28 20:04:07.143 -08 000000077 INF: Excitation Filter 1: Moved 107 steps in 370.0625 ms
17-02-28 20:04:07.143 -08 000000077 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.1909 ms
17-02-28 20:04:07.143 -08 000000077 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.2864 ms
17-02-28 20:04:07.143 -08 000000097 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.0704 ms
17-02-28 20:04:07.143 -08 000000097 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.4483 ms
17-02-28 20:04:07.143 -08 000000077 INF: ======================================
17-02-28 20:04:07.143 -08 000000097 INF: ======================================
17-02-28 20:04:07.145 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:07.145 -08 000000030 INF: Y Motor: Unshifted Position: 990717
17-02-28 20:04:07.145 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:07.145 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:07.146 -08 000000032 INF: ======================================
17-02-28 20:04:07.165 -08 000000073 INF: ======================================
17-02-28 20:04:07.166 -08 000000070 INF: ===================Camera TDI===================
17-02-28 20:04:07.168 -08 000000070 INF: ======================================
17-02-28 20:04:07.207 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:04:07.207 -08 000000030 INF: Y Motor: Moved to 14.9072 after 7861 ms
17-02-28 20:04:07.207 -08 000000030 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:07.208 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:07.270 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:07.271 -08 000000030 INF: Y Motor: Recv v 4097\r
17-02-28 20:04:07.271 -08 000000030 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:07.271 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:07.333 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:04:07.333 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:07.333 -08 000000030 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:07.394 -08 000000030 INF: Y Motor: Recv v 134217728\r
17-02-28 20:04:07.394 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:04:07.394 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:07.394 -08 000000030 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:07.456 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:04:07.456 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:07.456 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:07.456 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:07.520 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:07.521 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:04:07.521 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:07.521 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:07.582 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:07.583 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:04:07.583 -08 000000030 INF: ======================================
17-02-28 20:04:07.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:07.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:07.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:07.586 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:04:07.643 -08 000000034 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:04:07.643 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:07.706 -08 000000062 INF: FPGA: Recv TDIYERD 1490718
17-02-28 20:04:07.706 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:04:07.768 -08 000000080 INF: FPGA: Recv ZADCR 33886
17-02-28 20:04:07.768 -08 000000042 INF: At scan end Y pos = 14.907 and Z pos = -0.130. Y moved -48.539 mm
17-02-28 20:04:07.768 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:04:07.831 -08 000000078 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:04:07.831 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:04:07.831 -08 000000042 INF: TDIScan finished after 12653.9545 ms
17-02-28 20:04:07.831 -08 000000042 INF: Image[0]: Y should trigger at 63.446 mm, 2nd row was at 64.355 mm (error = 0.909 mm)
17-02-28 20:04:07.831 -08 000000042 INF: Image[2]: Y should trigger at 63.446 mm, 2nd row was at 64.355 mm (error = 0.909 mm)
17-02-28 20:04:07.832 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:07.833 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:07.868 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.529 um
17-02-28 20:04:07.868 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:07.869 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:04:07.893 -08 000000025 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:04:07.893 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:07.894 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:07.894 -08 000000065 INF: ===================Dither Clean Up Command===================
17-02-28 20:04:07.894 -08 000000085 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:04:07.894 -08 000000031 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:04:07.894 -08 000000094 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:04:07.894 -08 000000094 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:04:07.894 -08 000000085 INF: ======================================
17-02-28 20:04:07.895 -08 000000094 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:04:07.895 -08 000000031 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:07.895 -08 000000031 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:07.895 -08 000000095 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:04:07.895 -08 000000099 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:04:07.895 -08 000000099 INF: ======================================
17-02-28 20:04:07.896 -08 000000095 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:04:07.956 -08 000000062 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:07.956 -08 000000062 INF: FPGA: Recv ZSEL 
17-02-28 20:04:07.956 -08 000000095 INF: FPGA: Xmit ZDACW 39420\n
17-02-28 20:04:07.956 -08 000000094 INF: ======================================
17-02-28 20:04:07.958 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:07.958 -08 000000031 INF: ======================================
17-02-28 20:04:08.018 -08 000000090 INF: FPGA: Recv ZDACW 
17-02-28 20:04:08.019 -08 000000095 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:04:08.019 -08 000000095 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:04:08.080 -08 000000034 INF: FPGA: Recv TDIBB
17-02-28 20:04:08.080 -08 000000095 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:04:08.081 -08 000000095 INF: ======================================
17-02-28 20:04:08.082 -08 000000065 INF: ======================================
17-02-28 20:04:08.083 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:08.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:04:08.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:08.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:04:08.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:08.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:04:08.085 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:08.085 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:04:08.085 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:08.085 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:04:08.085 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:04:08.086 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:04:08.086 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-02-28 20:04:08.086 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:04:08.086 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:04:08.110 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:04:08.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:04:08.110 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:04:08.110 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:04:08.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:04:08.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface===================
17-02-28 20:04:08.127 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.129 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.129 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:08.129 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:08.156 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:08.157 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.157 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:04:08.157 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:04:08.228 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:08.230 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1201 Request: {"Cycle":2,"Lane":2,"Tile":1201,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF277","HCSMMF194","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.240 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1208 Request: {"Cycle":2,"Lane":2,"Tile":1208,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF222","HCSMMF287","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.258 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1203 Request: {"Cycle":2,"Lane":2,"Tile":1203,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF281","HCSMMF193","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.281 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1202 Request: {"Cycle":2,"Lane":2,"Tile":1202,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF177","HCSMMF263","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.294 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:08.340 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1209 Request: {"Cycle":2,"Lane":2,"Tile":1209,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF267","HCSMMF236","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.343 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1204 Request: {"Cycle":2,"Lane":2,"Tile":1204,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF203","HCSMMF227","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.345 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1206 Request: {"Cycle":2,"Lane":2,"Tile":1206,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF272","HCSMMF204","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.348 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1207 Request: {"Cycle":2,"Lane":2,"Tile":1207,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF276","HCSMMF285","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.350 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1205 Request: {"Cycle":2,"Lane":2,"Tile":1205,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF271","HCSMMF261","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.352 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1212 Request: {"Cycle":2,"Lane":2,"Tile":1212,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF264","HCSMMF205","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.354 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1211 Request: {"Cycle":2,"Lane":2,"Tile":1211,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF282","HCSMMF176","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.355 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1214 Request: {"Cycle":2,"Lane":2,"Tile":1214,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF240","HCSMMF238","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.357 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1210 Request: {"Cycle":2,"Lane":2,"Tile":1210,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF247","HCSMMF185","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.358 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1213 Request: {"Cycle":2,"Lane":2,"Tile":1213,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF235","HCSMMF220","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.359 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1218 Request: {"Cycle":2,"Lane":2,"Tile":1218,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF215","HCSMMF213","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.361 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1220 Request: {"Cycle":2,"Lane":2,"Tile":1220,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF199","HCSMMF190","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.362 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1221 Request: {"Cycle":2,"Lane":2,"Tile":1221,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF207","HCSMMF279","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.364 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1219 Request: {"Cycle":2,"Lane":2,"Tile":1219,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF286","HCSMMF254","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.366 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1215 Request: {"Cycle":2,"Lane":2,"Tile":1215,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF269","HCSMMF248","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.367 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1217 Request: {"Cycle":2,"Lane":2,"Tile":1217,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF209","HCSMMF197","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.368 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1216 Request: {"Cycle":2,"Lane":2,"Tile":1216,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF253","HCSMMF208","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.372 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1222 Request: {"Cycle":2,"Lane":2,"Tile":1222,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF206","HCSMMF273","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.375 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1223 Request: {"Cycle":2,"Lane":2,"Tile":1223,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF180","HCSMMF225","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.381 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1226 Request: {"Cycle":2,"Lane":2,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF212","HCSMMF242","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.387 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1224 Request: {"Cycle":2,"Lane":2,"Tile":1224,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF246","HCSMMF252","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.389 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1225 Request: {"Cycle":2,"Lane":2,"Tile":1225,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF181","HCSMMF211","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.390 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1228 Request: {"Cycle":2,"Lane":2,"Tile":1228,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF216","HCSMMF275","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.393 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1227 Request: {"Cycle":2,"Lane":2,"Tile":1227,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF186","HCSMMF249","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.395 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.401 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:04:08.490 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.490 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:04:08.528 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.534 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:04:08.534 -08 000000090 INF: FPGA: Recv MIOCOMPR
17-02-28 20:04:08.534 -08 000000042 INF: Compensator: Moved OutOfPath in 377 ms
17-02-28 20:04:08.534 -08 000000042 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:04:08.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.536 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.537 -08 000000097 INF: ===================Move Tilt Motor 1===================
17-02-28 20:04:08.537 -08 000000054 INF: ===================Move Tilt Motor 2===================
17-02-28 20:04:08.537 -08 000000077 INF: ===================Move Tilt Motor 3===================
17-02-28 20:04:08.537 -08 000000097 INF: ======================================
17-02-28 20:04:08.537 -08 000000077 INF: ======================================
17-02-28 20:04:08.537 -08 000000054 INF: ======================================
17-02-28 20:04:08.538 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.544 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:08.545 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:04:08.554 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:04:08.554 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:04:08.554 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:04:08.554 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:08.555 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:08.558 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:04:08.558 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:04:08.558 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:04:08.593 -08 000000070 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:08.593 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:08.593 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:04:08.593 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1504 mm
17-02-28 20:04:08.594 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:08.594 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:04:08.626 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.632 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:04:08.660 -08 000000100 INF: FPGA: Recv ZTRG 
17-02-28 20:04:08.661 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:04:08.712 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.718 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:04:08.720 -08 000000062 INF: FPGA: Recv ZYT 
17-02-28 20:04:08.721 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:04:08.721 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:04:08.780 -08 000000045 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:04:08.780 -08 000000045 INF: FPGA: Recv ZMV 
17-02-28 20:04:08.780 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:04:08.780 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 59.588 ms
17-02-28 20:04:08.780 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:04:08.810 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.844 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:08.846 -08 000000080 INF: FPGA: Recv ZDACR 60292
17-02-28 20:04:08.846 -08 000000042 INF: Z Motor: MoveAndTrigger took 252.5314 ms w/comms
17-02-28 20:04:08.846 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:04:08.846 -08 000000042 INF: Z Motor: MoveAbsStepped took 252.7017 ms
17-02-28 20:04:08.846 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:08.847 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:04:08.856 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:04:08.856 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:08.856 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:08.856 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:04:08.856 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:04:08.906 -08 000000033 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:08.907 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:08.916 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:08.917 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:04:08.925 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:04:08.925 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:08.925 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:08.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:08.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:04:08.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:08.928 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = C_1
17-02-28 20:04:08.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:08.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:08.930 -08 000000083 INF: ===================Move X,Y===================
17-02-28 20:04:08.930 -08 000000078 INF: ===================MoveEmissionFilters===================
17-02-28 20:04:08.930 -08 000000083 INF: ===================Move X,Y, Parallel===================
17-02-28 20:04:08.931 -08 000000031 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:08.931 -08 000000044 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:08.931 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:08.931 -08 000000080 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:08.931 -08 000000068 INF: ===================Move X Motor without settling===================
17-02-28 20:04:08.931 -08 000000040 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:08.931 -08 000000068 INF: X Motor: Xmit PR VM\n
17-02-28 20:04:08.931 -08 000000031 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:08.931 -08 000000040 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9072 mm
17-02-28 20:04:08.932 -08 000000044 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:08.932 -08 000000080 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:08.932 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:08.932 -08 000000040 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:08.932 -08 000000040 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:08.932 -08 000000034 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:04:08.932 -08 000000100 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:04:08.933 -08 000000095 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:04:08.933 -08 000000030 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:04:08.933 -08 000000054 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:04:08.933 -08 000000097 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:04:08.933 -08 000000095 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:04:08.933 -08 000000030 INF: ======================================
17-02-28 20:04:08.933 -08 000000095 INF: ======================================
17-02-28 20:04:08.933 -08 000000097 INF: ======================================
17-02-28 20:04:08.934 -08 000000034 INF: ======================================
17-02-28 20:04:08.934 -08 000000100 INF: ======================================
17-02-28 20:04:08.934 -08 000000054 INF: ======================================
17-02-28 20:04:08.935 -08 000000095 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:04:08.935 -08 000000031 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:08.935 -08 000000067 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:04:08.935 -08 000000080 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:08.936 -08 000000067 INF: ======================================
17-02-28 20:04:08.936 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:08.936 -08 000000095 INF: ======================================
17-02-28 20:04:08.936 -08 000000031 INF: ======================================
17-02-28 20:04:08.937 -08 000000080 INF: ======================================
17-02-28 20:04:08.937 -08 000000062 INF: ======================================
17-02-28 20:04:08.937 -08 000000044 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:08.938 -08 000000044 INF: ======================================
17-02-28 20:04:08.940 -08 000000078 INF: ======================================
17-02-28 20:04:08.970 -08 000000068 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:04:08.970 -08 000000068 INF: X Motor: Xmit PR VI\n
17-02-28 20:04:08.970 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:04:08.970 -08 000000040 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:08.970 -08 000000040 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:09.034 -08 000000068 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:04:09.034 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:04:09.034 -08 000000040 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:09.034 -08 000000068 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:04:09.034 -08 000000068 INF: X Motor: Moving to 74.7156 mm @15.000 mm/sec, started at 72.4814 mm
17-02-28 20:04:09.034 -08 000000068 INF: X Motor: Xmit MA 6437\n
17-02-28 20:04:09.096 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:04:09.097 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:04:09.097 -08 000000040 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:09.097 -08 000000040 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:04:09.097 -08 000000040 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:04:09.098 -08 000000068 INF: X Motor: Recv MA 6437\r\n>
17-02-28 20:04:09.098 -08 000000068 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:04:09.157 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:04:09.157 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:09.157 -08 000000040 INF: Y Motor: Start the move command
17-02-28 20:04:09.157 -08 000000040 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:09.218 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:09.219 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:04:09.219 -08 000000040 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:04:09.219 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:09.345 -08 000000040 INF: Y Motor: Unshifted Position: 1074394
17-02-28 20:04:09.395 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:09.468 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:09.520 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:09.532 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:09.659 -08 000000040 INF: Y Motor: Unshifted Position: 1781549
17-02-28 20:04:09.709 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:09.718 -08 000000068 INF: X Motor: Xmit PR ER\n
17-02-28 20:04:09.783 -08 000000068 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:04:09.783 -08 000000068 INF: X Motor: Moved to 74.7153 after 685 ms
17-02-28 20:04:09.783 -08 000000068 INF: ======================================
17-02-28 20:04:09.784 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:09.833 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:09.844 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:09.970 -08 000000040 INF: Y Motor: Unshifted Position: 2557404
17-02-28 20:04:10.020 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:10.094 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:10.144 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:10.155 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:10.280 -08 000000040 INF: Y Motor: Unshifted Position: 3338177
17-02-28 20:04:10.330 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:10.405 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:10.457 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:10.470 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:10.593 -08 000000040 INF: Y Motor: Unshifted Position: 4123248
17-02-28 20:04:10.643 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:10.720 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:10.769 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:10.780 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:10.904 -08 000000040 INF: Y Motor: Unshifted Position: 4903190
17-02-28 20:04:10.954 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:11.030 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:11.081 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:11.090 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:11.218 -08 000000040 INF: Y Motor: Unshifted Position: 5675338
17-02-28 20:04:11.268 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:11.340 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:11.392 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:11.403 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:11.530 -08 000000040 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:04:11.530 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:11.530 -08 000000040 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:11.592 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:04:11.592 -08 000000040 INF: Y Motor: Moved to 64.5335 after 2373 ms
17-02-28 20:04:11.592 -08 000000040 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:11.653 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:11.655 -08 000000040 INF: Y Motor: Recv v 4096\r
17-02-28 20:04:11.655 -08 000000040 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:11.655 -08 000000040 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:11.716 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:04:11.716 -08 000000040 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:11.716 -08 000000040 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:11.717 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:11.778 -08 000000040 INF: Y Motor: Recv v 402653184\r
17-02-28 20:04:11.778 -08 000000040 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:04:11.778 -08 000000040 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:11.778 -08 000000040 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:11.843 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:04:11.843 -08 000000040 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:11.843 -08 000000040 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:11.843 -08 000000040 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:11.905 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:04:11.905 -08 000000040 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:11.905 -08 000000040 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:11.965 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:04:11.965 -08 000000040 INF: ======================================
17-02-28 20:04:11.966 -08 000000083 INF: ===================Move X,Y===================
17-02-28 20:04:11.967 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:11.967 -08 000000083 INF: ======================================
17-02-28 20:04:11.968 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:11.969 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:11.969 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:04:11.969 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:04:12.026 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:12.027 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:12.027 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:04:12.088 -08 000000051 INF: FPGA: Recv ZFREQCL
17-02-28 20:04:12.088 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:04:12.088 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:12.089 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:12.150 -08 000000062 INF: FPGA: Recv TDIYERD 6453353
17-02-28 20:04:12.150 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453353 counts (64.534 mm)
17-02-28 20:04:12.151 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:12.151 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:12.152 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:04:12.152 -08 000000044 INF: ===================Set YMotor gains for scans===================
17-02-28 20:04:12.152 -08 000000044 INF: ======================================
17-02-28 20:04:12.153 -08 000000084 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:04:12.153 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:04:12.154 -08 000000084 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:04:12.155 -08 000000084 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:04:12.155 -08 000000084 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:04:12.215 -08 000000029 INF: FPGA: Recv TDIYPOS
17-02-28 20:04:12.215 -08 000000084 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:04:12.217 -08 000000084 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:04:12.217 -08 000000084 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:04:12.276 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:12.278 -08 000000069 INF: FPGA: Recv TDIYARM2
17-02-28 20:04:12.279 -08 000000084 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:04:12.280 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:04:12.282 -08 000000084 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:04:12.282 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:04:12.283 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:04:12.284 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:04:12.285 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:12.340 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:12.590 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:12.651 -08 000000084 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:04:12.651 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:04:12.651 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:12.652 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:12.666 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:04:12.668 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:12.902 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:12.963 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:13.046 -08 000000084 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:04:13.046 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:04:13.046 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:13.061 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:04:13.063 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:04:13.064 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:04:13.065 -08 000000084 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:13.066 -08 000000084 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:04:13.066 -08 000000084 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:13.068 -08 000000084 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:04:13.068 -08 000000084 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:04:13.068 -08 000000084 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:04:13.068 -08 000000084 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:04:13.088 -08 000000062 INF: FPGA: Recv ZYT 
17-02-28 20:04:13.088 -08 000000084 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:04:13.088 -08 000000084 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:04:13.150 -08 000000095 INF: FPGA: Recv ZARM
17-02-28 20:04:13.150 -08 000000084 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.1485 ms
17-02-28 20:04:13.150 -08 000000084 INF: Z Motor: ArmAbsStepped took 82.328 ms
17-02-28 20:04:13.151 -08 000000084 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:13.152 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:04:13.153 -08 000000084 INF: ======================================
17-02-28 20:04:13.154 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:13.155 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:13.155 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:13.155 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:13.156 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:13.157 -08 000000098 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:04:13.157 -08 000000069 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:04:13.157 -08 000000098 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:04:13.157 -08 000000098 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:04:13.157 -08 000000098 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:04:13.157 -08 000000098 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:04:13.157 -08 000000069 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:04:13.157 -08 000000069 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:04:13.157 -08 000000069 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:04:13.160 -08 000000069 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:04:13.215 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:13.276 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:13.523 -08 000000045 INF: FPGA: Recv EX1MV
17-02-28 20:04:13.523 -08 000000045 INF: FPGA: Recv EX2MV
17-02-28 20:04:13.523 -08 000000069 INF: Excitation Filter 2: Moved -107 steps in 365.5503 ms
17-02-28 20:04:13.523 -08 000000098 INF: Excitation Filter 1: Moved -107 steps in 365.7677 ms
17-02-28 20:04:13.523 -08 000000069 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.6818 ms
17-02-28 20:04:13.523 -08 000000098 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.8795 ms
17-02-28 20:04:13.523 -08 000000098 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.0121 ms
17-02-28 20:04:13.523 -08 000000069 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.7878 ms
17-02-28 20:04:13.524 -08 000000069 INF: ======================================
17-02-28 20:04:13.524 -08 000000098 INF: ======================================
17-02-28 20:04:13.525 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:13.526 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:13.526 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:13.527 -08 000000093 INF: ===================Serial===================
17-02-28 20:04:13.527 -08 000000054 INF: ===================Camera TDI===================
17-02-28 20:04:13.527 -08 000000034 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:13.527 -08 000000080 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:13.527 -08 000000080 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:04:13.528 -08 000000080 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:13.528 -08 000000080 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:13.528 -08 000000093 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:04:13.528 -08 000000093 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:04:13.528 -08 000000054 INF: ===================Camera TDI, Parallel===================
17-02-28 20:04:13.528 -08 000000034 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:04:13.529 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:04:13.529 -08 000000092 INF: ===================Camera TDI===================
17-02-28 20:04:13.530 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.530 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.531 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.531 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.535 -08 000000034 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:04:13.586 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:13.587 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:04:13.587 -08 000000080 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:13.587 -08 000000080 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:13.649 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:04:13.649 -08 000000080 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:13.680 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.680 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.681 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.681 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.713 -08 000000080 INF: Y Motor: Recv v 0\r
17-02-28 20:04:13.713 -08 000000080 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:13.713 -08 000000080 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:04:13.713 -08 000000080 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:04:13.776 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:04:13.776 -08 000000080 INF: Y Motor: Start the move command
17-02-28 20:04:13.776 -08 000000080 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:13.830 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.830 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.831 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.831 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.836 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:13.839 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:04:13.839 -08 000000080 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:04:13.839 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:13.900 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:13.964 -08 000000080 INF: Y Motor: Unshifted Position: 5935178
17-02-28 20:04:13.980 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.980 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.981 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.981 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:14.014 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:14.130 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:04:14.130 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:04:14.130 -08 000000077 INF: ===================Camera #0 Frame #1===================
17-02-28 20:04:14.131 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:04:14.131 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:04:14.131 -08 000000092 INF: ===================Camera #2 Frame #1===================
17-02-28 20:04:14.136 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:14.150 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:14.211 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:14.275 -08 000000080 INF: Y Motor: Unshifted Position: 5888529
17-02-28 20:04:14.283 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:04:14.283 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:04:14.283 -08 000000077 INF: ===================Camera #0 Frame #3===================
17-02-28 20:04:14.284 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:04:14.284 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:04:14.284 -08 000000092 INF: ===================Camera #2 Frame #3===================
17-02-28 20:04:14.325 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:14.439 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:04:14.439 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:04:14.439 -08 000000077 INF: ===================Camera #0 Frame #4===================
17-02-28 20:04:14.440 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:04:14.440 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:04:14.440 -08 000000092 INF: ===================Camera #2 Frame #4===================
17-02-28 20:04:14.450 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:14.461 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:14.523 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:14.585 -08 000000080 INF: Y Motor: Unshifted Position: 5841667
17-02-28 20:04:14.592 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:14.592 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:14.592 -08 000000077 INF: ===================Camera #0 Frame #5===================
17-02-28 20:04:14.593 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:14.593 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:14.593 -08 000000092 INF: ===================Camera #2 Frame #5===================
17-02-28 20:04:14.635 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:14.648 -08 000000047 INF: FPGA: Recv ZWAIT 
17-02-28 20:04:14.648 -08 000000047 INF: FPGA: Recv TDIYWAIT
17-02-28 20:04:14.648 -08 000000034 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:14.649 -08 000000093 INF: ===================Serial===================
17-02-28 20:04:14.650 -08 000000034 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:04:14.650 -08 000000093 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:04:14.651 -08 000000093 INF: ===================Serial===================
17-02-28 20:04:14.651 -08 000000036 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:04:14.651 -08 000000031 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:04:14.651 -08 000000036 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:04:14.651 -08 000000036 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:04:14.651 -08 000000036 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:04:14.651 -08 000000036 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:04:14.651 -08 000000031 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:04:14.651 -08 000000031 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:04:14.651 -08 000000031 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:04:14.652 -08 000000031 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:04:14.652 -08 000000093 INF: ======================================
17-02-28 20:04:14.745 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:04:14.745 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:04:14.745 -08 000000077 INF: ===================Camera #0 Frame #6===================
17-02-28 20:04:14.746 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:04:14.746 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:04:14.746 -08 000000092 INF: ===================Camera #2 Frame #6===================
17-02-28 20:04:14.748 -08 000000077 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:04:14.749 -08 000000077 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:14.749 -08 000000092 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:04:14.750 -08 000000092 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:14.761 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:14.772 -08 000000077 INF: Camera #0 ReleaseBuffer
17-02-28 20:04:14.772 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:04:14.773 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:14.773 -08 000000077 INF: ======================================
17-02-28 20:04:14.796 -08 000000092 INF: Camera #2 ReleaseBuffer
17-02-28 20:04:14.796 -08 000000092 INF: ===================Camera TDI===================
17-02-28 20:04:14.797 -08 000000092 INF: ======================================
17-02-28 20:04:14.799 -08 000000054 INF: ===================Camera TDI===================
17-02-28 20:04:14.800 -08 000000054 INF: ======================================
17-02-28 20:04:14.836 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:14.899 -08 000000080 INF: Y Motor: Unshifted Position: 5797060
17-02-28 20:04:14.949 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:15.021 -08 000000085 INF: FPGA: Recv EX1MV
17-02-28 20:04:15.021 -08 000000085 INF: FPGA: Recv EX2MV
17-02-28 20:04:15.021 -08 000000031 INF: Excitation Filter 2: Moved 107 steps in 369.6127 ms
17-02-28 20:04:15.021 -08 000000031 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.739 ms
17-02-28 20:04:15.021 -08 000000031 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.8435 ms
17-02-28 20:04:15.021 -08 000000036 INF: Excitation Filter 1: Moved 107 steps in 369.8841 ms
17-02-28 20:04:15.021 -08 000000036 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.0902 ms
17-02-28 20:04:15.021 -08 000000036 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.1647 ms
17-02-28 20:04:15.021 -08 000000031 INF: ======================================
17-02-28 20:04:15.021 -08 000000036 INF: ======================================
17-02-28 20:04:15.023 -08 000000034 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:15.024 -08 000000034 INF: ======================================
17-02-28 20:04:15.085 -08 000000080 INF: Y Motor: Unshifted Position: 5797041
17-02-28 20:04:15.085 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:15.085 -08 000000080 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:15.086 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:15.146 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:15.147 -08 000000080 INF: Y Motor: Recv v 0\r
17-02-28 20:04:15.147 -08 000000080 INF: Y Motor: Moved to 62.9704 after 1308 ms
17-02-28 20:04:15.147 -08 000000080 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:15.209 -08 000000080 INF: Y Motor: Recv v 4097\r
17-02-28 20:04:15.209 -08 000000080 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:15.209 -08 000000080 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:15.273 -08 000000080 INF: Y Motor: Recv v 0\r
17-02-28 20:04:15.273 -08 000000080 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:15.273 -08 000000080 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:15.335 -08 000000080 INF: Y Motor: Recv v 134217728\r
17-02-28 20:04:15.335 -08 000000080 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:04:15.335 -08 000000080 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:15.335 -08 000000080 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:15.396 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:15.397 -08 000000080 INF: Y Motor: Recv v 0\r
17-02-28 20:04:15.397 -08 000000080 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:15.397 -08 000000080 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:15.397 -08 000000080 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:15.460 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:15.461 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:04:15.461 -08 000000080 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:15.461 -08 000000080 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:15.523 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:04:15.523 -08 000000080 INF: ======================================
17-02-28 20:04:15.524 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:15.525 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:15.526 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.526 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:04:15.583 -08 000000047 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:04:15.583 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:15.645 -08 000000031 INF: FPGA: Recv TDIYERD 6297044
17-02-28 20:04:15.645 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:04:15.708 -08 000000051 INF: FPGA: Recv ZADCR 2425
17-02-28 20:04:15.708 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:04:15.708 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:04:15.710 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:15.770 -08 000000031 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:04:15.770 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:04:15.770 -08 000000042 INF: TDIScan finished after 6853.4935 ms
17-02-28 20:04:15.770 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:04:15.770 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:04:15.770 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:04:15.771 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:15.832 -08 000000068 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:04:15.832 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.833 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.834 -08 000000039 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:04:15.834 -08 000000095 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:04:15.834 -08 000000102 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:04:15.834 -08 000000095 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:15.834 -08 000000095 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:15.834 -08 000000039 INF: ======================================
17-02-28 20:04:15.835 -08 000000102 INF: ======================================
17-02-28 20:04:15.898 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:04:15.898 -08 000000095 INF: ======================================
17-02-28 20:04:15.899 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.900 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.901 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:04:15.940 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.940 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:04:15.971 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.971 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:04:16.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:16.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:04:16.021 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:16.080 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:16.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:16.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:16.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:04:16.084 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:16.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:16.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:04:16.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:04:16.335 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:16.396 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:16.646 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:16.807 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:16.807 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:04:16.830 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0844698217952293Best Z position at top surface = -0.156161119420011Best Z position at top surface + compensator offset = -0.133461119420011 C:2,L:3,T
17-02-28 20:04:16.832 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.156161119420011
17-02-28 20:04:16.832 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.95831
17-02-28 20:04:16.832 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0844698217952293
17-02-28 20:04:16.832 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.61331
17-02-28 20:04:16.832 -08 000000042 INF: Z-height at LaneTopSurface is -0.156161119420011.
17-02-28 20:04:16.832 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:16.968 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:04:16.968 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:04:16.990 -08 000000067 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:16.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:16.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.992 -08 000000042 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:04:16.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.993 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.994 -08 000000036 INF: ===================Move Tilt Motor 1===================
17-02-28 20:04:16.994 -08 000000068 INF: ===================Move Tilt Motor 2===================
17-02-28 20:04:16.994 -08 000000065 INF: ===================Move Tilt Motor 3===================
17-02-28 20:04:16.994 -08 000000068 INF: ======================================
17-02-28 20:04:16.994 -08 000000036 INF: ======================================
17-02-28 20:04:16.995 -08 000000065 INF: ======================================
17-02-28 20:04:16.996 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.997 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.997 -08 000000042 INF: ETF Best Z: -0.1334611 mm (34985 DAC)
17-02-28 20:04:16.997 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.998 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.998 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:04:16.998 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:04:17.424 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:17.427 -08 000000099 INF: FPGA: Recv MIOCOMPF
17-02-28 20:04:17.427 -08 000000042 INF: Compensator: Moved IntoPath in 428 ms
17-02-28 20:04:17.427 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:17.429 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:17.435 -08 000000042 INF: Swath 1 position calculated to be: {X=74.16164, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:04:17.435 -08 000000042 INF: Swath 2 position calculated to be: {X=75.26964, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:04:17.440 -08 000000042 INF: Swath 0: Converted transform from (-46.66878, 5.060077) pixels to (-0.016215, 0.001725) mm.
17-02-28 20:04:17.446 -08 000000042 INF: Swath 1: Converted transform from (-67.79903, 6.334889) pixels to (-0.02346, 0.00207) mm.
17-02-28 20:04:17.446 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:04:17.447 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:04:17.447 -08 000000042 INF: Transformed XStagePosition from 74.16164 mm to 74.1454213522375 mm.
17-02-28 20:04:17.458 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5548143554488 mm.
17-02-28 20:04:17.458 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3548143554488 mm.
17-02-28 20:04:17.458 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4455643554488 mm.
17-02-28 20:04:17.460 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:17.461 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:04:17.461 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:17.461 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = C_1
17-02-28 20:04:17.466 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:17.467 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:17.467 -08 000000029 INF: ===================MoveEmissionFilters===================
17-02-28 20:04:17.468 -08 000000062 INF: ===================Move X,Y===================
17-02-28 20:04:17.468 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:17.468 -08 000000062 INF: ===================Move X,Y, Parallel===================
17-02-28 20:04:17.468 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:17.468 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:17.468 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:04:17.468 -08 000000039 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:17.468 -08 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:17.469 -08 000000069 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:04:17.469 -08 000000069 INF: Z Motor: Moving to -0.1535 mm, started at -0.0100 mm
17-02-28 20:04:17.469 -08 000000069 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:04:17.469 -08 000000065 INF: ===================Move X Motor without settling===================
17-02-28 20:04:17.469 -08 000000051 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:17.469 -08 000000039 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:17.469 -08 000000065 INF: X Motor: Xmit PR VM\n
17-02-28 20:04:17.469 -08 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:17.469 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:17.470 -08 000000051 INF: Y Motor: Moving to 64.5548 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:04:17.470 -08 000000051 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:17.470 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:17.470 -08 000000031 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:04:17.470 -08 000000044 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:04:17.470 -08 000000073 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:04:17.470 -08 000000033 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:04:17.470 -08 000000025 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:04:17.470 -08 000000083 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:04:17.471 -08 000000031 INF: ======================================
17-02-28 20:04:17.471 -08 000000083 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:04:17.471 -08 000000033 INF: ======================================
17-02-28 20:04:17.471 -08 000000025 INF: ======================================
17-02-28 20:04:17.471 -08 000000083 INF: ======================================
17-02-28 20:04:17.471 -08 000000073 INF: ======================================
17-02-28 20:04:17.472 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:17.472 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:17.473 -08 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:17.473 -08 000000083 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:04:17.473 -08 000000093 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:04:17.473 -08 000000083 INF: ======================================
17-02-28 20:04:17.474 -08 000000093 INF: ======================================
17-02-28 20:04:17.474 -08 000000070 INF: ======================================
17-02-28 20:04:17.474 -08 000000068 INF: ======================================
17-02-28 20:04:17.474 -08 000000044 INF: ======================================
17-02-28 20:04:17.475 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:17.475 -08 000000039 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:17.476 -08 000000067 INF: ======================================
17-02-28 20:04:17.477 -08 000000039 INF: ======================================
17-02-28 20:04:17.478 -08 000000029 INF: ======================================
17-02-28 20:04:17.486 -08 000000054 INF: FPGA: Recv ZTRG 
17-02-28 20:04:17.486 -08 000000069 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:04:17.487 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:17.551 -08 000000095 INF: FPGA: Recv ZYT 
17-02-28 20:04:17.551 -08 000000069 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:04:17.551 -08 000000069 INF: FPGA: Xmit ZMV 40228\n
17-02-28 20:04:17.553 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:04:17.553 -08 000000051 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:17.553 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:17.555 -08 000000065 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:04:17.555 -08 000000065 INF: X Motor: Xmit PR VI\n
17-02-28 20:04:17.613 -08 000000090 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:04:17.613 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:04:17.615 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:04:17.615 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:17.615 -08 000000065 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:04:17.615 -08 000000065 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:04:17.615 -08 000000065 INF: X Motor: Moving to 74.1454 mm @15.000 mm/sec, started at 74.7153 mm
17-02-28 20:04:17.615 -08 000000065 INF: X Motor: Xmit MA 6204\n
17-02-28 20:04:17.677 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:04:17.677 -08 000000051 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:17.677 -08 000000065 INF: X Motor: Recv MA 6204\r\n>
17-02-28 20:04:17.677 -08 000000051 INF: Y Motor: Set target position to 5955481 encoder counts
17-02-28 20:04:17.677 -08 000000051 INF: Y Motor: Xmit s r0xca 5955481\r
17-02-28 20:04:17.677 -08 000000065 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:04:17.736 -08 000000094 INF: FPGA: Recv ZMV 
17-02-28 20:04:17.736 -08 000000069 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.2515 ms
17-02-28 20:04:17.736 -08 000000069 INF: FPGA: Xmit ZDACR\n
17-02-28 20:04:17.737 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:17.738 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:04:17.738 -08 000000051 INF: Y Motor: Start the move command
17-02-28 20:04:17.738 -08 000000051 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:17.800 -08 000000098 INF: FPGA: Recv ZDACR 40228
17-02-28 20:04:17.800 -08 000000069 INF: Z Motor: MoveAndTrigger took 330.9947 ms w/comms
17-02-28 20:04:17.800 -08 000000069 INF: Z Motor: After move to -0.1535, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:04:17.800 -08 000000069 INF: Z Motor: MoveAbsStepped took 331.1695 ms
17-02-28 20:04:17.800 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:17.801 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:17.802 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:04:17.802 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:04:17.802 -08 000000051 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:04:17.802 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:17.803 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:04:17.803 -08 000000029 INF: ===================Camera Arm TDI===================
17-02-28 20:04:17.803 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:17.803 -08 000000029 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:17.804 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:04:17.804 -08 000000029 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:17.804 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:17.805 -08 000000090 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:04:17.860 -08 000000067 INF: FPGA: Recv ZSEL 
17-02-28 20:04:17.861 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:17.861 -08 000000090 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:04:17.925 -08 000000040 INF: FPGA: Recv TDIBB
17-02-28 20:04:17.925 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:17.926 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:04:17.927 -08 000000051 INF: Y Motor: Unshifted Position: 5881018
17-02-28 20:04:17.927 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:17.928 -08 000000090 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:04:17.928 -08 000000090 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:04:17.928 -08 000000090 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:04:17.977 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:17.987 -08 000000031 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:17.987 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:17.989 -08 000000090 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:04:17.989 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:17.991 -08 000000090 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:04:17.991 -08 000000090 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:04:17.991 -08 000000090 INF: Z Motor: Arming to move to -0.1135 mm
17-02-28 20:04:17.991 -08 000000090 INF: FPGA: Xmit ZYT 6435481 4\n
17-02-28 20:04:18.049 -08 000000063 INF: FPGA: Recv ZYT 
17-02-28 20:04:18.049 -08 000000090 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6381018 enc / 63.810 mm / ) = 6435481 enc / 64.355 mm
17-02-28 20:04:18.049 -08 000000090 INF: FPGA: Xmit ZARM 29743\n
17-02-28 20:04:18.051 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:18.101 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:18.111 -08 000000073 INF: FPGA: Recv ZARM
17-02-28 20:04:18.111 -08 000000090 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9078 ms
17-02-28 20:04:18.111 -08 000000090 INF: Z Motor: ArmAbsStepped took 120.0762 ms
17-02-28 20:04:18.111 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:18.112 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:18.112 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:04:18.113 -08 000000065 INF: X Motor: Xmit PR ER\n
17-02-28 20:04:18.114 -08 000000090 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:04:18.114 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:04:18.116 -08 000000090 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:04:18.116 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:04:18.117 -08 000000090 INF: ======================================
17-02-28 20:04:18.175 -08 000000065 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:04:18.175 -08 000000065 INF: X Motor: Moved to 74.1465 after 497 ms
17-02-28 20:04:18.175 -08 000000065 INF: ======================================
17-02-28 20:04:18.239 -08 000000051 INF: Y Motor: Unshifted Position: 5955482
17-02-28 20:04:18.239 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:18.239 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:18.301 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:04:18.301 -08 000000051 INF: Y Motor: Moved to 64.5548 after 498 ms
17-02-28 20:04:18.301 -08 000000051 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:18.362 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:18.363 -08 000000051 INF: Y Motor: Recv v 4096\r
17-02-28 20:04:18.363 -08 000000051 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:18.363 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:18.425 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:18.426 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:04:18.426 -08 000000051 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:18.426 -08 000000051 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:18.488 -08 000000051 INF: Y Motor: Recv v 402653184\r
17-02-28 20:04:18.488 -08 000000051 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:04:18.488 -08 000000051 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:18.488 -08 000000051 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:18.550 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:04:18.550 -08 000000051 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:18.550 -08 000000051 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:18.550 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:18.612 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:04:18.612 -08 000000051 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:18.612 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:18.674 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:04:18.674 -08 000000051 INF: ======================================
17-02-28 20:04:18.675 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:18.675 -08 000000062 INF: ===================Move X,Y===================
17-02-28 20:04:18.676 -08 000000062 INF: ======================================
17-02-28 20:04:18.735 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:18.759 -08 000000029 INF: Camera #0 AttachBuffer (imageDataPtr = 56909434928 imgPtr = 56909434928 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:04:18.759 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:04:18.760 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:18.775 -08 000000029 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:18.777 -08 000000029 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:18.985 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:19.049 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:19.299 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:19.360 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:19.610 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:19.672 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:19.756 -08 000000029 INF: Camera #2 AttachBuffer (imageDataPtr = 58721374256 imgPtr = 59627343920 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:04:19.757 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:04:19.757 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:19.772 -08 000000029 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:19.774 -08 000000029 INF: ===================Camera Arm TDI===================
17-02-28 20:04:19.775 -08 000000029 INF: ======================================
17-02-28 20:04:19.776 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:19.777 -08 000000069 INF: ======================================
17-02-28 20:04:19.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:19.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:19.779 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:04:19.779 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:04:19.861 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:19.861 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:04:19.921 -08 000000092 INF: FPGA: Recv ZFREQCL
17-02-28 20:04:19.921 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:04:19.921 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:19.921 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:19.922 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:19.984 -08 000000098 INF: FPGA: Recv TDIYERD 6455482
17-02-28 20:04:19.984 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455482 counts (64.555 mm)
17-02-28 20:04:19.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:19.985 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:19.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:19.985 -08 000000033 INF: ===================TDI FPGA Arm===================
17-02-28 20:04:19.985 -08 000000070 INF: ===================Set YMotor gains for scans===================
17-02-28 20:04:19.986 -08 000000070 INF: ======================================
17-02-28 20:04:19.986 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:19.987 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:04:19.987 -08 000000033 INF: FPGA: Xmit TDIYPOS 6344556\n
17-02-28 20:04:20.046 -08 000000068 INF: FPGA: Recv TDIYPOS
17-02-28 20:04:20.046 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:20.047 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:04:20.048 -08 000000033 INF: FPGA: Xmit TDIYARM3 139264 6435481 1 1\n
17-02-28 20:04:20.108 -08 000000044 INF: FPGA: Recv TDIYARM3
17-02-28 20:04:20.108 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:20.109 -08 000000033 INF: ===================TDI FPGA Arm===================
17-02-28 20:04:20.110 -08 000000033 INF: ======================================
17-02-28 20:04:20.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:20.112 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:20.112 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:20.112 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:20.113 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:20.114 -08 000000025 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:04:20.114 -08 000000094 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:04:20.114 -08 000000025 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:04:20.114 -08 000000025 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:04:20.114 -08 000000025 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:04:20.114 -08 000000094 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:04:20.114 -08 000000025 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:04:20.114 -08 000000094 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:04:20.114 -08 000000094 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:04:20.115 -08 000000094 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:04:20.235 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:20.295 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:20.482 -08 000000054 INF: FPGA: Recv EX2MV
17-02-28 20:04:20.482 -08 000000054 INF: FPGA: Recv EX1MV
17-02-28 20:04:20.482 -08 000000094 INF: Excitation Filter 1: Moved -107 steps in 367.6819 ms
17-02-28 20:04:20.482 -08 000000025 INF: Excitation Filter 2: Moved -107 steps in 367.8788 ms
17-02-28 20:04:20.482 -08 000000094 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.8336 ms
17-02-28 20:04:20.482 -08 000000094 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.9404 ms
17-02-28 20:04:20.482 -08 000000025 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.9768 ms
17-02-28 20:04:20.482 -08 000000025 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.1491 ms
17-02-28 20:04:20.482 -08 000000094 INF: ======================================
17-02-28 20:04:20.482 -08 000000025 INF: ======================================
17-02-28 20:04:20.483 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:20.484 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:20.485 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:04:20.485 -08 000000095 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:20.485 -08 000000039 INF: ===================FPGA Z Wait===================
17-02-28 20:04:20.485 -08 000000090 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:20.486 -08 000000039 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:04:20.486 -08 000000090 INF: Y Motor: Moving to 14.9065 mm @6.500 mm/sec, started at 64.5548 mm
17-02-28 20:04:20.486 -08 000000090 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:20.486 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:20.486 -08 000000032 INF: ===================Camera TDI, Parallel===================
17-02-28 20:04:20.486 -08 000000095 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:04:20.487 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:04:20.487 -08 000000031 INF: ===================Camera TDI===================
17-02-28 20:04:20.489 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:20.489 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:20.490 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:20.490 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:20.492 -08 000000095 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:04:20.545 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:20.546 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:04:20.546 -08 000000090 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:20.546 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:20.609 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:20.610 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:04:20.610 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:20.639 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:20.639 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:20.640 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:20.640 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:20.672 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:04:20.672 -08 000000090 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:20.672 -08 000000090 INF: Y Motor: Set target position to 990648 encoder counts
17-02-28 20:04:20.672 -08 000000090 INF: Y Motor: Xmit s r0xca 990648\r
17-02-28 20:04:20.734 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:04:20.734 -08 000000090 INF: Y Motor: Start the move command
17-02-28 20:04:20.734 -08 000000090 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:20.789 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:20.789 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:20.790 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:20.790 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:20.796 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:04:20.796 -08 000000090 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:04:20.796 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:20.855 -08 000000083 INF: FPGA: Recv ZWAIT 
17-02-28 20:04:20.855 -08 000000039 INF: ======================================
17-02-28 20:04:20.859 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:20.921 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:20.922 -08 000000090 INF: Y Motor: Unshifted Position: 5894280
17-02-28 20:04:20.939 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:20.939 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:20.939 -08 000000034 INF: ===================Camera #0 Frame #5===================
17-02-28 20:04:20.940 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:20.940 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:20.940 -08 000000031 INF: ===================Camera #2 Frame #5===================
17-02-28 20:04:20.972 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.096 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.106 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:04:21.106 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:04:21.106 -08 000000034 INF: ===================Camera #0 Frame #11===================
17-02-28 20:04:21.107 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:04:21.107 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:04:21.107 -08 000000031 INF: ===================Camera #2 Frame #11===================
17-02-28 20:04:21.171 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:21.233 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:21.234 -08 000000090 INF: Y Motor: Unshifted Position: 5690613
17-02-28 20:04:21.274 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:04:21.274 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:04:21.274 -08 000000034 INF: ===================Camera #0 Frame #17===================
17-02-28 20:04:21.279 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:04:21.279 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:04:21.279 -08 000000031 INF: ===================Camera #2 Frame #17===================
17-02-28 20:04:21.284 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.407 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.442 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:21.442 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:21.442 -08 000000034 INF: ===================Camera #0 Frame #23===================
17-02-28 20:04:21.451 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:21.451 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:21.451 -08 000000031 INF: ===================Camera #2 Frame #23===================
17-02-28 20:04:21.483 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:21.544 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:21.545 -08 000000090 INF: Y Motor: Unshifted Position: 5487170
17-02-28 20:04:21.595 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.611 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:04:21.611 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:04:21.611 -08 000000034 INF: ===================Camera #0 Frame #29===================
17-02-28 20:04:21.623 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:04:21.623 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:04:21.623 -08 000000031 INF: ===================Camera #2 Frame #30===================
17-02-28 20:04:21.722 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.780 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:04:21.780 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:04:21.780 -08 000000034 INF: ===================Camera #0 Frame #35===================
17-02-28 20:04:21.794 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:21.799 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:04:21.799 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:04:21.799 -08 000000031 INF: ===================Camera #2 Frame #36===================
17-02-28 20:04:21.856 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:21.857 -08 000000090 INF: Y Motor: Unshifted Position: 5284148
17-02-28 20:04:21.907 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.949 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:04:21.949 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:04:21.949 -08 000000034 INF: ===================Camera #0 Frame #42===================
17-02-28 20:04:21.972 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:04:21.972 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:04:21.972 -08 000000031 INF: ===================Camera #2 Frame #43===================
17-02-28 20:04:22.030 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.106 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:22.122 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:04:22.122 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:04:22.122 -08 000000034 INF: ===================Camera #0 Frame #48===================
17-02-28 20:04:22.149 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:04:22.149 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:04:22.149 -08 000000031 INF: ===================Camera #2 Frame #49===================
17-02-28 20:04:22.169 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:22.170 -08 000000090 INF: Y Motor: Unshifted Position: 5081774
17-02-28 20:04:22.220 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.292 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:04:22.292 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:04:22.292 -08 000000034 INF: ===================Camera #0 Frame #54===================
17-02-28 20:04:22.322 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:04:22.322 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:04:22.322 -08 000000031 INF: ===================Camera #2 Frame #55===================
17-02-28 20:04:22.344 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.419 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:22.462 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:04:22.462 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:04:22.462 -08 000000034 INF: ===================Camera #0 Frame #61===================
17-02-28 20:04:22.479 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:22.480 -08 000000090 INF: Y Motor: Unshifted Position: 4877675
17-02-28 20:04:22.495 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:04:22.495 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:04:22.495 -08 000000031 INF: ===================Camera #2 Frame #62===================
17-02-28 20:04:22.530 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.633 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:04:22.633 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:04:22.633 -08 000000034 INF: ===================Camera #0 Frame #67===================
17-02-28 20:04:22.656 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.672 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:04:22.672 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:04:22.672 -08 000000031 INF: ===================Camera #2 Frame #68===================
17-02-28 20:04:22.729 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:22.792 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:22.792 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:22.792 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:22.793 -08 000000090 INF: Y Motor: Unshifted Position: 4676177
17-02-28 20:04:22.793 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:04:22.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 5 of 5 seconds left===================
17-02-28 20:04:22.803 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:04:22.803 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:04:22.803 -08 000000034 INF: ===================Camera #0 Frame #73===================
17-02-28 20:04:22.843 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.844 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:04:22.844 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:04:22.844 -08 000000031 INF: ===================Camera #2 Frame #75===================
17-02-28 20:04:22.968 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.973 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:04:22.973 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:04:22.973 -08 000000034 INF: ===================Camera #0 Frame #79===================
17-02-28 20:04:23.023 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:04:23.023 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:04:23.023 -08 000000031 INF: ===================Camera #2 Frame #81===================
17-02-28 20:04:23.105 -08 000000090 INF: Y Motor: Unshifted Position: 4472503
17-02-28 20:04:23.143 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:04:23.143 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:04:23.143 -08 000000034 INF: ===================Camera #0 Frame #86===================
17-02-28 20:04:23.155 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:23.197 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:04:23.197 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:04:23.197 -08 000000031 INF: ===================Camera #2 Frame #88===================
17-02-28 20:04:23.279 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:23.316 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:04:23.316 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:04:23.316 -08 000000034 INF: ===================Camera #0 Frame #92===================
17-02-28 20:04:23.374 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:04:23.374 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:04:23.374 -08 000000031 INF: ===================Camera #2 Frame #94===================
17-02-28 20:04:23.415 -08 000000090 INF: Y Motor: Unshifted Position: 4271005
17-02-28 20:04:23.465 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:23.486 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:04:23.486 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:04:23.486 -08 000000034 INF: ===================Camera #0 Frame #98===================
17-02-28 20:04:23.547 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:04:23.547 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:04:23.547 -08 000000031 INF: ===================Camera #2 Frame #101===================
17-02-28 20:04:23.590 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:23.656 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:04:23.656 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:04:23.656 -08 000000034 INF: ===================Camera #0 Frame #105===================
17-02-28 20:04:23.724 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:04:23.724 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:04:23.724 -08 000000031 INF: ===================Camera #2 Frame #107===================
17-02-28 20:04:23.729 -08 000000090 INF: Y Motor: Unshifted Position: 4066680
17-02-28 20:04:23.779 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:23.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:23.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 4 of 5 seconds left===================
17-02-28 20:04:23.829 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:04:23.829 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:04:23.829 -08 000000034 INF: ===================Camera #0 Frame #111===================
17-02-28 20:04:23.897 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:04:23.897 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:04:23.897 -08 000000031 INF: ===================Camera #2 Frame #113===================
17-02-28 20:04:23.903 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:23.999 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:04:23.999 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:04:23.999 -08 000000034 INF: ===================Camera #0 Frame #117===================
17-02-28 20:04:24.043 -08 000000090 INF: Y Motor: Unshifted Position: 3863881
17-02-28 20:04:24.070 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:04:24.070 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:04:24.070 -08 000000031 INF: ===================Camera #2 Frame #120===================
17-02-28 20:04:24.093 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:24.169 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:04:24.169 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:04:24.169 -08 000000034 INF: ===================Camera #0 Frame #123===================
17-02-28 20:04:24.215 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:24.245 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:04:24.245 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:04:24.245 -08 000000031 INF: ===================Camera #2 Frame #126===================
17-02-28 20:04:24.339 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:04:24.339 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:04:24.339 -08 000000034 INF: ===================Camera #0 Frame #130===================
17-02-28 20:04:24.351 -08 000000090 INF: Y Motor: Unshifted Position: 3662165
17-02-28 20:04:24.401 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:24.416 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:04:24.416 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:04:24.416 -08 000000031 INF: ===================Camera #2 Frame #133===================
17-02-28 20:04:24.511 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:04:24.511 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:04:24.511 -08 000000034 INF: ===================Camera #0 Frame #136===================
17-02-28 20:04:24.526 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:24.590 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:04:24.590 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:04:24.590 -08 000000031 INF: ===================Camera #2 Frame #139===================
17-02-28 20:04:24.665 -08 000000090 INF: Y Motor: Unshifted Position: 3457847
17-02-28 20:04:24.681 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:04:24.681 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:04:24.681 -08 000000034 INF: ===================Camera #0 Frame #142===================
17-02-28 20:04:24.715 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:24.761 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:04:24.761 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:04:24.761 -08 000000031 INF: ===================Camera #2 Frame #145===================
17-02-28 20:04:24.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:24.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 3 of 5 seconds left===================
17-02-28 20:04:24.839 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:24.851 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:04:24.851 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:04:24.851 -08 000000034 INF: ===================Camera #0 Frame #149===================
17-02-28 20:04:24.932 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:04:24.932 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:04:24.932 -08 000000031 INF: ===================Camera #2 Frame #152===================
17-02-28 20:04:24.975 -08 000000090 INF: Y Motor: Unshifted Position: 3256352
17-02-28 20:04:25.024 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:04:25.024 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:04:25.024 -08 000000034 INF: ===================Camera #0 Frame #155===================
17-02-28 20:04:25.025 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:25.106 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:04:25.106 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:04:25.106 -08 000000031 INF: ===================Camera #2 Frame #158===================
17-02-28 20:04:25.150 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:25.194 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:04:25.194 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:04:25.194 -08 000000034 INF: ===================Camera #0 Frame #161===================
17-02-28 20:04:25.277 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:04:25.277 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:04:25.277 -08 000000031 INF: ===================Camera #2 Frame #164===================
17-02-28 20:04:25.289 -08 000000090 INF: Y Motor: Unshifted Position: 3052036
17-02-28 20:04:25.339 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:25.364 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:04:25.364 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:04:25.364 -08 000000034 INF: ===================Camera #0 Frame #167===================
17-02-28 20:04:25.447 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:04:25.447 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:04:25.447 -08 000000031 INF: ===================Camera #2 Frame #171===================
17-02-28 20:04:25.463 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:25.534 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:04:25.534 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:04:25.534 -08 000000034 INF: ===================Camera #0 Frame #174===================
17-02-28 20:04:25.599 -08 000000090 INF: Y Motor: Unshifted Position: 2850547
17-02-28 20:04:25.621 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:04:25.621 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:04:25.621 -08 000000031 INF: ===================Camera #2 Frame #177===================
17-02-28 20:04:25.649 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:25.708 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:04:25.708 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:04:25.708 -08 000000034 INF: ===================Camera #0 Frame #180===================
17-02-28 20:04:25.774 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:25.792 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:04:25.792 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:04:25.792 -08 000000031 INF: ===================Camera #2 Frame #183===================
17-02-28 20:04:25.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:25.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 2 of 5 seconds left===================
17-02-28 20:04:25.878 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:04:25.878 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:04:25.878 -08 000000034 INF: ===================Camera #0 Frame #186===================
17-02-28 20:04:25.913 -08 000000090 INF: Y Motor: Unshifted Position: 2646225
17-02-28 20:04:25.962 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:04:25.962 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:04:25.962 -08 000000031 INF: ===================Camera #2 Frame #189===================
17-02-28 20:04:25.963 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.037 -08 000000098 INF: RunCopyService queue size at 2/28/2017 8:04:26 PM is 2
17-02-28 20:04:26.048 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:04:26.048 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:04:26.048 -08 000000034 INF: ===================Camera #0 Frame #193===================
17-02-28 20:04:26.086 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.133 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:04:26.133 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:04:26.133 -08 000000031 INF: ===================Camera #2 Frame #196===================
17-02-28 20:04:26.221 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:04:26.221 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:04:26.221 -08 000000034 INF: ===================Camera #0 Frame #199===================
17-02-28 20:04:26.226 -08 000000090 INF: Y Motor: Unshifted Position: 2442783
17-02-28 20:04:26.276 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.308 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:04:26.308 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:04:26.308 -08 000000031 INF: ===================Camera #2 Frame #202===================
17-02-28 20:04:26.390 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:04:26.390 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:04:26.390 -08 000000034 INF: ===================Camera #0 Frame #205===================
17-02-28 20:04:26.400 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.478 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:04:26.478 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:04:26.478 -08 000000031 INF: ===================Camera #2 Frame #208===================
17-02-28 20:04:26.536 -08 000000090 INF: Y Motor: Unshifted Position: 2241930
17-02-28 20:04:26.560 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:04:26.560 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:04:26.560 -08 000000034 INF: ===================Camera #0 Frame #211===================
17-02-28 20:04:26.586 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.652 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:04:26.652 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:04:26.652 -08 000000031 INF: ===================Camera #2 Frame #215===================
17-02-28 20:04:26.711 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.730 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:04:26.730 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:04:26.730 -08 000000034 INF: ===================Camera #0 Frame #218===================
17-02-28 20:04:26.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:26.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 1 of 5 seconds left===================
17-02-28 20:04:26.829 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:04:26.829 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:04:26.829 -08 000000031 INF: ===================Camera #2 Frame #221===================
17-02-28 20:04:26.850 -08 000000090 INF: Y Motor: Unshifted Position: 2037613
17-02-28 20:04:26.900 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.903 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:04:26.903 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:04:26.903 -08 000000034 INF: ===================Camera #0 Frame #224===================
17-02-28 20:04:27.002 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-02-28 20:04:27.002 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-02-28 20:04:27.002 -08 000000031 INF: ===================Camera #2 Frame #228===================
17-02-28 20:04:27.023 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.073 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:04:27.073 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:04:27.073 -08 000000034 INF: ===================Camera #0 Frame #230===================
17-02-28 20:04:27.162 -08 000000090 INF: Y Motor: Unshifted Position: 1834596
17-02-28 20:04:27.179 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-02-28 20:04:27.179 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-02-28 20:04:27.179 -08 000000031 INF: ===================Camera #2 Frame #234===================
17-02-28 20:04:27.212 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.243 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:04:27.243 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:04:27.243 -08 000000034 INF: ===================Camera #0 Frame #237===================
17-02-28 20:04:27.336 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.352 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 240, frameCount = 241.
17-02-28 20:04:27.352 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 241
17-02-28 20:04:27.352 -08 000000031 INF: ===================Camera #2 Frame #241===================
17-02-28 20:04:27.416 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:04:27.416 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:04:27.416 -08 000000034 INF: ===================Camera #0 Frame #243===================
17-02-28 20:04:27.472 -08 000000090 INF: Y Motor: Unshifted Position: 1633091
17-02-28 20:04:27.522 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.529 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247.
17-02-28 20:04:27.529 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247
17-02-28 20:04:27.529 -08 000000031 INF: ===================Camera #2 Frame #247===================
17-02-28 20:04:27.586 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:04:27.586 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:04:27.586 -08 000000034 INF: ===================Camera #0 Frame #249===================
17-02-28 20:04:27.647 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.702 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-02-28 20:04:27.702 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-02-28 20:04:27.702 -08 000000031 INF: ===================Camera #2 Frame #253===================
17-02-28 20:04:27.756 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:04:27.756 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:04:27.756 -08 000000034 INF: ===================Camera #0 Frame #255===================
17-02-28 20:04:27.786 -08 000000090 INF: Y Motor: Unshifted Position: 1428991
17-02-28 20:04:27.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:27.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:27.794 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:04:27.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:27.836 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.875 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 259, frameCount = 260.
17-02-28 20:04:27.875 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 260
17-02-28 20:04:27.875 -08 000000031 INF: ===================Camera #2 Frame #260===================
17-02-28 20:04:27.893 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:04:27.926 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:04:27.926 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:04:27.926 -08 000000034 INF: ===================Camera #0 Frame #262===================
17-02-28 20:04:27.960 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.970 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF)
17-02-28 20:04:27.970 -08 000000018 INF: Current Position of Pump is: 11904
17-02-28 20:04:28.052 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266.
17-02-28 20:04:28.052 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266
17-02-28 20:04:28.052 -08 000000031 INF: ===================Camera #2 Frame #266===================
17-02-28 20:04:28.070 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:04:28.098 -08 000000090 INF: Y Motor: Unshifted Position: 1225960
17-02-28 20:04:28.100 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:04:28.100 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:04:28.100 -08 000000034 INF: ===================Camera #0 Frame #268===================
17-02-28 20:04:28.148 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:28.159 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF)
17-02-28 20:04:28.159 -08 000000018 INF: Current Position of Pump is: 11904
17-02-28 20:04:28.159 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Dispensing port PortC===================
17-02-28 20:04:28.220 -08 000000039 INF: FPGA: Recv TDIYWAIT
17-02-28 20:04:28.220 -08 000000095 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:28.221 -08 000000095 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:04:28.222 -08 000000069 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:04:28.222 -08 000000078 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:04:28.223 -08 000000069 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:04:28.223 -08 000000069 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:04:28.223 -08 000000069 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:04:28.223 -08 000000078 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:04:28.223 -08 000000078 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:04:28.223 -08 000000078 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:04:28.223 -08 000000069 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:04:28.224 -08 000000078 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:04:28.225 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:04:28.225 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:04:28.225 -08 000000031 INF: ===================Camera #2 Frame #272===================
17-02-28 20:04:28.248 -08 000000031 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:04:28.249 -08 000000031 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:28.259 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD11904R\r
17-02-28 20:04:28.272 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:28.345 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:28.408 -08 000000090 INF: Y Motor: Unshifted Position: 1024255
17-02-28 20:04:28.445 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:28.458 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:28.465 -08 000000031 INF: Camera #2 ReleaseBuffer
17-02-28 20:04:28.465 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:04:28.465 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:04:28.465 -08 000000034 INF: ===================Camera #0 Frame #272===================
17-02-28 20:04:28.466 -08 000000031 INF: ===================Camera TDI===================
17-02-28 20:04:28.477 -08 000000034 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:04:28.478 -08 000000034 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:28.501 -08 000000031 INF: ======================================
17-02-28 20:04:28.532 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:28.593 -08 000000044 INF: FPGA: Recv EX1MV
17-02-28 20:04:28.593 -08 000000044 INF: FPGA: Recv EX2MV
17-02-28 20:04:28.593 -08 000000069 INF: Excitation Filter 1: Moved 107 steps in 370.4445 ms
17-02-28 20:04:28.593 -08 000000069 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.5494 ms
17-02-28 20:04:28.593 -08 000000069 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.6232 ms
17-02-28 20:04:28.593 -08 000000069 INF: ======================================
17-02-28 20:04:28.594 -08 000000078 INF: Excitation Filter 2: Moved 107 steps in 370.3411 ms
17-02-28 20:04:28.594 -08 000000078 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.4471 ms
17-02-28 20:04:28.594 -08 000000078 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.5272 ms
17-02-28 20:04:28.594 -08 000000078 INF: ======================================
17-02-28 20:04:28.595 -08 000000090 INF: Y Motor: Unshifted Position: 990650
17-02-28 20:04:28.595 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:28.595 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:28.596 -08 000000095 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:28.597 -08 000000095 INF: ======================================
17-02-28 20:04:28.645 -08 000000034 INF: Camera #0 ReleaseBuffer
17-02-28 20:04:28.645 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:04:28.660 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:04:28.660 -08 000000090 INF: Y Motor: Moved to 14.9065 after 7863 ms
17-02-28 20:04:28.660 -08 000000090 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:28.680 -08 000000034 INF: ======================================
17-02-28 20:04:28.681 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:04:28.683 -08 000000032 INF: ======================================
17-02-28 20:04:28.722 -08 000000090 INF: Y Motor: Recv v 4097\r
17-02-28 20:04:28.722 -08 000000090 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:28.722 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:28.782 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:28.784 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:04:28.784 -08 000000090 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:28.784 -08 000000090 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:28.845 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:28.846 -08 000000090 INF: Y Motor: Recv v 134217728\r
17-02-28 20:04:28.846 -08 000000090 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:04:28.846 -08 000000090 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:28.846 -08 000000090 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:28.908 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:04:28.908 -08 000000090 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:28.908 -08 000000090 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:28.908 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:28.970 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:04:28.970 -08 000000090 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:28.970 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:29.032 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:04:29.032 -08 000000090 INF: ======================================
17-02-28 20:04:29.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:29.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:29.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.035 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:04:29.095 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:29.096 -08 000000051 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:04:29.096 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:29.155 -08 000000100 INF: FPGA: Recv TDIYERD 1490649
17-02-28 20:04:29.155 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:04:29.156 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:29.217 -08 000000065 INF: FPGA: Recv ZADCR 34937
17-02-28 20:04:29.217 -08 000000042 INF: At scan end Y pos = 14.906 and Z pos = -0.134. Y moved -48.539 mm
17-02-28 20:04:29.217 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:04:29.282 -08 000000032 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:04:29.282 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:04:29.282 -08 000000042 INF: TDIScan finished after 11834.7399 ms
17-02-28 20:04:29.282 -08 000000042 INF: Image[0]: Y should trigger at 63.446 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:04:29.282 -08 000000042 INF: Image[2]: Y should trigger at 63.446 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:04:29.283 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.313 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.624 um
17-02-28 20:04:29.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.314 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:04:29.344 -08 000000069 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:04:29.344 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.345 -08 000000034 INF: ===================Dither Clean Up Command===================
17-02-28 20:04:29.345 -08 000000099 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:04:29.345 -08 000000045 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:04:29.345 -08 000000067 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:04:29.345 -08 000000067 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:04:29.345 -08 000000099 INF: ======================================
17-02-28 20:04:29.345 -08 000000067 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:04:29.346 -08 000000045 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:29.346 -08 000000045 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:29.346 -08 000000068 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:04:29.346 -08 000000094 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:04:29.346 -08 000000094 INF: ======================================
17-02-28 20:04:29.347 -08 000000068 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:04:29.406 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:29.407 -08 000000100 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:29.407 -08 000000100 INF: FPGA: Recv ZSEL 
17-02-28 20:04:29.407 -08 000000068 INF: FPGA: Xmit ZDACW 40228\n
17-02-28 20:04:29.407 -08 000000067 INF: ======================================
17-02-28 20:04:29.408 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:04:29.408 -08 000000045 INF: ======================================
17-02-28 20:04:29.468 -08 000000031 INF: FPGA: Recv ZDACW 
17-02-28 20:04:29.469 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:29.469 -08 000000068 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:04:29.469 -08 000000068 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:04:29.530 -08 000000039 INF: FPGA: Recv TDIBB
17-02-28 20:04:29.530 -08 000000068 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:04:29.531 -08 000000068 INF: ======================================
17-02-28 20:04:29.532 -08 000000034 INF: ======================================
17-02-28 20:04:29.533 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.534 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:04:29.534 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.534 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:04:29.534 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.534 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:04:29.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:04:29.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:04:29.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:04:29.536 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Dispensing port PortC, Waiting for image analysis===================
17-02-28 20:04:29.536 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Dispensing port PortC===================
17-02-28 20:04:29.536 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:04:29.536 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:04:29.559 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:04:29.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:29.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:04:29.560 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:29.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:04:29.560 -08 000000042 INF: Transformed XStagePosition from 75.26964 mm to 75.24617806077 mm.
17-02-28 20:04:29.560 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:04:29.641 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5551593553983 mm.
17-02-28 20:04:29.641 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3551593553983 mm.
17-02-28 20:04:29.641 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4459093553983 mm.
17-02-28 20:04:29.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:04:29.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.645 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -153.5 um, section = C_1
17-02-28 20:04:29.648 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:29.649 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:29.652 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:04:29.652 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:29.653 -08 000000029 INF: ===================MoveEmissionFilters===================
17-02-28 20:04:29.653 -08 000000038 INF: ===================Move X,Y, Parallel===================
17-02-28 20:04:29.654 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:04:29.654 -08 000000059 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:04:29.684 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:29.689 -08 000000063 INF: ===================Move X Motor without settling===================
17-02-28 20:04:29.690 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:04:29.690 -08 000000063 INF: X Motor: Xmit PR VM\n
17-02-28 20:04:29.703 -08 000000057 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:29.705 -08 000000057 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:29.707 -08 000000004 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:29.707 -08 000000004 INF: Y Motor: Moving to 64.5552 mm @25.000 mm/sec, started at 14.9065 mm
17-02-28 20:04:29.707 -08 000000004 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:29.707 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:29.708 -08 000000004 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:29.708 -08 000000064 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:04:29.708 -08 000000073 INF: ===================TDI Scan Setup===================
17-02-28 20:04:29.708 -08 000000037 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:04:29.709 -08 000000064 INF: ======================================
17-02-28 20:04:29.709 -08 000000037 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:04:29.709 -08 000000037 INF: ======================================
17-02-28 20:04:29.709 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:29.710 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:29.710 -08 000000073 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:29.710 -08 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:29.711 -08 000000037 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:04:29.711 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:29.712 -08 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:29.712 -08 000000067 INF: ===================Camera Arm TDI===================
17-02-28 20:04:29.712 -08 000000037 INF: ======================================
17-02-28 20:04:29.712 -08 000000073 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:04:29.713 -08 000000064 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:04:29.713 -08 000000073 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:29.714 -08 000000064 INF: ======================================
17-02-28 20:04:29.714 -08 000000037 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:04:29.714 -08 000000073 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:04:29.714 -08 000000037 INF: ======================================
17-02-28 20:04:29.715 -08 000000057 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:29.715 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:29.716 -08 000000069 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:04:29.716 -08 000000051 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:04:29.717 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:29.717 -08 000000051 INF: ======================================
17-02-28 20:04:29.717 -08 000000037 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:04:29.718 -08 000000069 INF: ======================================
17-02-28 20:04:29.718 -08 000000067 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:29.718 -08 000000025 INF: ======================================
17-02-28 20:04:29.718 -08 000000037 INF: ======================================
17-02-28 20:04:29.719 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:29.719 -08 000000057 INF: ======================================
17-02-28 20:04:29.719 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:29.720 -08 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:29.720 -08 000000098 INF: ======================================
17-02-28 20:04:29.722 -08 000000033 INF: ======================================
17-02-28 20:04:29.722 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1102 Request: {"Cycle":2,"Lane":3,"Tile":1102,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF184","HCSMMF257","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.724 -08 000000029 INF: ======================================
17-02-28 20:04:29.759 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1101 Request: {"Cycle":2,"Lane":3,"Tile":1101,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF252","HCSMMF275","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.765 -08 000000090 INF: FPGA: Recv ZSEL 
17-02-28 20:04:29.766 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:29.767 -08 000000004 INF: Y Motor: Recv ok\r
17-02-28 20:04:29.767 -08 000000004 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:29.767 -08 000000004 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:29.767 -08 000000073 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:29.767 -08 000000063 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:04:29.767 -08 000000063 INF: X Motor: Xmit PR VI\n
17-02-28 20:04:29.767 -08 000000073 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:04:29.769 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1110 Request: {"Cycle":2,"Lane":3,"Tile":1110,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF189","HCSMMF231","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.833 -08 000000045 INF: FPGA: Recv TDIBB
17-02-28 20:04:29.833 -08 000000073 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:29.834 -08 000000063 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:04:29.834 -08 000000004 INF: Y Motor: Recv ok\r
17-02-28 20:04:29.834 -08 000000004 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:29.834 -08 000000063 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:04:29.834 -08 000000063 INF: X Motor: Moving to 75.2462 mm @15.000 mm/sec, started at 74.1465 mm
17-02-28 20:04:29.834 -08 000000063 INF: X Motor: Xmit MA 6654\n
17-02-28 20:04:29.835 -08 000000073 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:04:29.835 -08 000000073 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:29.837 -08 000000073 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:04:29.837 -08 000000073 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:04:29.837 -08 000000073 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:04:29.871 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1109 Request: {"Cycle":2,"Lane":3,"Tile":1109,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF200","HCSMMF223","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.872 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1103 Request: {"Cycle":2,"Lane":3,"Tile":1103,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF192","HCSMMF246","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.873 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1105 Request: {"Cycle":2,"Lane":3,"Tile":1105,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF224","HCSMMF280","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.873 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1108 Request: {"Cycle":2,"Lane":3,"Tile":1108,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF251","HCSMMF176","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.874 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1104 Request: {"Cycle":2,"Lane":3,"Tile":1104,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF218","HCSMMF216","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.875 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1107 Request: {"Cycle":2,"Lane":3,"Tile":1107,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF235","HCSMMF268","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.875 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1106 Request: {"Cycle":2,"Lane":3,"Tile":1106,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF253","HCSMMF190","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.876 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1111 Request: {"Cycle":2,"Lane":3,"Tile":1111,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF220","HCSMMF256","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.877 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1112 Request: {"Cycle":2,"Lane":3,"Tile":1112,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF267","HCSMMF178","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.877 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1113 Request: {"Cycle":2,"Lane":3,"Tile":1113,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF217","HCSMMF261","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.878 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1116 Request: {"Cycle":2,"Lane":3,"Tile":1116,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF188","HCSMMF240","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.879 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1114 Request: {"Cycle":2,"Lane":3,"Tile":1114,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF258","HCSMMF265","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.879 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1115 Request: {"Cycle":2,"Lane":3,"Tile":1115,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF182","HCSMMF281","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.880 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1121 Request: {"Cycle":2,"Lane":3,"Tile":1121,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF222","HCSMMF278","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.882 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1122 Request: {"Cycle":2,"Lane":3,"Tile":1122,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF198","HCSMMF206","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.882 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1117 Request: {"Cycle":2,"Lane":3,"Tile":1117,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF210","HCSMMF245","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.883 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1124 Request: {"Cycle":2,"Lane":3,"Tile":1124,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF202","HCSMMF273","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.884 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1125 Request: {"Cycle":2,"Lane":3,"Tile":1125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF215","HCSMMF264","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.885 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1119 Request: {"Cycle":2,"Lane":3,"Tile":1119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF187","HCSMMF254","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.885 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1127 Request: {"Cycle":2,"Lane":3,"Tile":1127,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF284","HCSMMF233","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.886 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1126 Request: {"Cycle":2,"Lane":3,"Tile":1126,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF277","HCSMMF285","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.888 -08 000000077 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:29.888 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1123 Request: {"Cycle":2,"Lane":3,"Tile":1123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF185","HCSMMF213","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.888 -08 000000073 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:29.889 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1118 Request: {"Cycle":2,"Lane":3,"Tile":1118,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF266","HCSMMF209","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.890 -08 000000004 INF: Y Motor: Recv v 0\r
17-02-28 20:04:29.890 -08 000000063 INF: X Motor: Recv MA 6654\r\n>
17-02-28 20:04:29.890 -08 000000004 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:29.890 -08 000000073 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:04:29.890 -08 000000004 INF: Y Motor: Set target position to 5955516 encoder counts
17-02-28 20:04:29.890 -08 000000004 INF: Y Motor: Xmit s r0xca 5955516\r
17-02-28 20:04:29.890 -08 000000073 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:29.891 -08 000000063 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:04:29.892 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1128 Request: {"Cycle":2,"Lane":3,"Tile":1128,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF194","HCSMMF239","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.892 -08 000000073 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:04:29.892 -08 000000073 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:04:29.892 -08 000000073 INF: Z Motor: Arming to move to -0.1135 mm
17-02-28 20:04:29.893 -08 000000073 INF: FPGA: Xmit ZYT 6435516 4\n
17-02-28 20:04:29.893 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1120 Request: {"Cycle":2,"Lane":3,"Tile":1120,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF230","HCSMMF248","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.895 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:29.901 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:04:29.954 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:04:29.954 -08 000000073 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490650 enc / 14.907 mm / ) = 6435516 enc / 64.355 mm
17-02-28 20:04:29.954 -08 000000073 INF: FPGA: Xmit ZARM 29743\n
17-02-28 20:04:29.956 -08 000000004 INF: Y Motor: Recv ok\r
17-02-28 20:04:29.956 -08 000000004 INF: Y Motor: Start the move command
17-02-28 20:04:29.956 -08 000000004 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:29.975 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:29.975 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:04:30.016 -08 000000039 INF: FPGA: Recv ZARM
17-02-28 20:04:30.016 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:30.016 -08 000000073 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.4227 ms
17-02-28 20:04:30.016 -08 000000073 INF: Z Motor: ArmAbsStepped took 123.2198 ms
17-02-28 20:04:30.016 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:30.016 -08 000000073 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:30.017 -08 000000004 INF: Y Motor: Recv ok\r
17-02-28 20:04:30.017 -08 000000004 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:04:30.017 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.017 -08 000000073 INF: ===================TDI Scan Setup===================
17-02-28 20:04:30.019 -08 000000073 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:04:30.022 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:04:30.022 -08 000000073 INF: ===================TDI Scan Setup===================
17-02-28 20:04:30.024 -08 000000073 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:04:30.024 -08 000000073 INF: ===================TDI Scan Setup===================
17-02-28 20:04:30.025 -08 000000073 INF: ======================================
17-02-28 20:04:30.077 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:30.107 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:30.113 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:04:30.142 -08 000000004 INF: Y Motor: Unshifted Position: 1067817
17-02-28 20:04:30.192 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.207 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:30.213 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:04:30.304 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:30.317 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.326 -08 000000067 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:04:30.326 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:04:30.326 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:30.327 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:30.341 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:30.343 -08 000000067 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:30.389 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:30.389 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:30.389 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:04:30.452 -08 000000004 INF: Y Motor: Unshifted Position: 1772321
17-02-28 20:04:30.502 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.515 -08 000000063 INF: X Motor: Xmit PR ER\n
17-02-28 20:04:30.576 -08 000000063 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:04:30.576 -08 000000063 INF: X Motor: Moved to 75.2451 after 685 ms
17-02-28 20:04:30.576 -08 000000063 INF: ======================================
17-02-28 20:04:30.589 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:04:30.627 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.765 -08 000000004 INF: Y Motor: Unshifted Position: 2554834
17-02-28 20:04:30.815 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.941 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.943 -08 000000067 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:04:30.943 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:04:30.943 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:30.958 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:30.960 -08 000000067 INF: ===================Camera Arm TDI===================
17-02-28 20:04:30.961 -08 000000067 INF: ======================================
17-02-28 20:04:30.962 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:30.963 -08 000000059 INF: ======================================
17-02-28 20:04:31.078 -08 000000004 INF: Y Motor: Unshifted Position: 3330616
17-02-28 20:04:31.128 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:31.253 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:31.389 -08 000000004 INF: Y Motor: Unshifted Position: 4113184
17-02-28 20:04:31.439 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:31.489 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:04:31.562 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:31.576 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:31.676 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:31.701 -08 000000004 INF: Y Motor: Unshifted Position: 4896452
17-02-28 20:04:31.751 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:31.764 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:31.875 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:32.012 -08 000000004 INF: Y Motor: Unshifted Position: 5670674
17-02-28 20:04:32.014 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:32.062 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:32.073 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:32.073 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:32.073 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-02-28 20:04:32.186 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:32.325 -08 000000004 INF: Y Motor: Unshifted Position: 5955519
17-02-28 20:04:32.375 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:32.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:32.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:32.446 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:32.446 -08 000000018 INF: WaitCommand(10000) start
17-02-28 20:04:32.446 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 10 of 10 seconds left===================
17-02-28 20:04:32.511 -08 000000004 INF: Y Motor: Unshifted Position: 5955517
17-02-28 20:04:32.511 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:32.511 -08 000000004 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:32.573 -08 000000004 INF: Y Motor: Recv v 0\r
17-02-28 20:04:32.573 -08 000000004 INF: Y Motor: Moved to 64.5552 after 2556 ms
17-02-28 20:04:32.573 -08 000000004 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:32.640 -08 000000004 INF: Y Motor: Recv v 4096\r
17-02-28 20:04:32.640 -08 000000004 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:32.640 -08 000000004 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:32.700 -08 000000004 INF: Y Motor: Recv v 0\r
17-02-28 20:04:32.700 -08 000000004 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:32.700 -08 000000004 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:32.762 -08 000000004 INF: Y Motor: Recv v 402653184\r
17-02-28 20:04:32.762 -08 000000004 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:04:32.762 -08 000000004 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:32.762 -08 000000004 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:32.824 -08 000000004 INF: Y Motor: Recv v 0\r
17-02-28 20:04:32.824 -08 000000004 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:32.824 -08 000000004 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:32.824 -08 000000004 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:32.886 -08 000000004 INF: Y Motor: Recv ok\r
17-02-28 20:04:32.886 -08 000000004 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:32.886 -08 000000004 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:32.948 -08 000000004 INF: Y Motor: Recv ok\r
17-02-28 20:04:32.948 -08 000000004 INF: ======================================
17-02-28 20:04:32.949 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:04:32.950 -08 000000038 INF: ======================================
17-02-28 20:04:32.951 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:32.952 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:32.952 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:04:32.952 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:04:33.011 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:33.011 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:04:33.071 -08 000000073 INF: FPGA: Recv ZFREQCL
17-02-28 20:04:33.071 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:04:33.071 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:33.072 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:33.133 -08 000000094 INF: FPGA: Recv TDIYERD 6455518
17-02-28 20:04:33.133 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455518 counts (64.555 mm)
17-02-28 20:04:33.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:33.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:33.135 -08 000000038 INF: ===================TDI FPGA Arm===================
17-02-28 20:04:33.135 -08 000000031 INF: ===================Set YMotor gains for scans===================
17-02-28 20:04:33.136 -08 000000031 INF: ======================================
17-02-28 20:04:33.136 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:33.137 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:04:33.137 -08 000000038 INF: FPGA: Xmit TDIYPOS 6344591\n
17-02-28 20:04:33.195 -08 000000045 INF: FPGA: Recv TDIYPOS
17-02-28 20:04:33.195 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:33.197 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:04:33.197 -08 000000038 INF: FPGA: Xmit TDIYARM3 139264 6435516 1 1\n
17-02-28 20:04:33.260 -08 000000069 INF: FPGA: Recv TDIYARM3
17-02-28 20:04:33.260 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:33.261 -08 000000038 INF: ===================TDI FPGA Arm===================
17-02-28 20:04:33.262 -08 000000038 INF: ======================================
17-02-28 20:04:33.263 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:33.264 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:33.264 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:33.265 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:33.265 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:33.266 -08 000000077 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:04:33.266 -08 000000034 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:04:33.266 -08 000000077 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:04:33.266 -08 000000077 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:04:33.266 -08 000000077 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:04:33.266 -08 000000034 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:04:33.266 -08 000000077 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:04:33.267 -08 000000034 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:04:33.267 -08 000000034 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:04:33.269 -08 000000034 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:04:33.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:33.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 9 of 10 seconds left===================
17-02-28 20:04:33.632 -08 000000063 INF: FPGA: Recv EX2MV
17-02-28 20:04:33.632 -08 000000063 INF: FPGA: Recv EX1MV
17-02-28 20:04:33.632 -08 000000034 INF: Excitation Filter 1: Moved -107 steps in 365.4651 ms
17-02-28 20:04:33.632 -08 000000077 INF: Excitation Filter 2: Moved -107 steps in 365.6544 ms
17-02-28 20:04:33.632 -08 000000034 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.6795 ms
17-02-28 20:04:33.632 -08 000000034 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.7696 ms
17-02-28 20:04:33.632 -08 000000077 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.8069 ms
17-02-28 20:04:33.632 -08 000000077 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.9821 ms
17-02-28 20:04:33.633 -08 000000034 INF: ======================================
17-02-28 20:04:33.633 -08 000000077 INF: ======================================
17-02-28 20:04:33.634 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:33.635 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:33.636 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:04:33.636 -08 000000090 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:33.636 -08 000000073 INF: ===================FPGA Z Wait===================
17-02-28 20:04:33.636 -08 000000031 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:33.636 -08 000000073 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:04:33.636 -08 000000031 INF: Y Motor: Moving to 14.9068 mm @6.500 mm/sec, started at 64.5552 mm
17-02-28 20:04:33.636 -08 000000095 INF: ===================Camera TDI, Parallel===================
17-02-28 20:04:33.637 -08 000000090 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:04:33.637 -08 000000031 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:33.637 -08 000000031 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:33.637 -08 000000090 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:04:33.638 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:04:33.638 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:04:33.639 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:33.639 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:33.640 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:33.640 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:33.697 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:33.697 -08 000000031 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:33.697 -08 000000031 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:33.761 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:33.761 -08 000000031 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:33.790 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:33.790 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:33.790 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:33.790 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:33.823 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:04:33.823 -08 000000031 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:33.823 -08 000000031 INF: Y Motor: Set target position to 990682 encoder counts
17-02-28 20:04:33.823 -08 000000031 INF: Y Motor: Xmit s r0xca 990682\r
17-02-28 20:04:33.885 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:33.885 -08 000000031 INF: Y Motor: Start the move command
17-02-28 20:04:33.885 -08 000000031 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:33.940 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:33.940 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:33.940 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:33.940 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:33.947 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:33.947 -08 000000031 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:04:33.947 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.007 -08 000000077 INF: FPGA: Recv ZWAIT 
17-02-28 20:04:34.007 -08 000000073 INF: ======================================
17-02-28 20:04:34.071 -08 000000031 INF: Y Motor: Unshifted Position: 5892364
17-02-28 20:04:34.090 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:34.090 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:34.090 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:34.090 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:34.090 -08 000000032 INF: ===================Camera #2 Frame #5===================
17-02-28 20:04:34.090 -08 000000100 INF: ===================Camera #0 Frame #5===================
17-02-28 20:04:34.121 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.248 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.255 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:04:34.255 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:04:34.255 -08 000000100 INF: ===================Camera #0 Frame #11===================
17-02-28 20:04:34.256 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:04:34.256 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:04:34.256 -08 000000032 INF: ===================Camera #2 Frame #11===================
17-02-28 20:04:34.384 -08 000000031 INF: Y Motor: Unshifted Position: 5689998
17-02-28 20:04:34.423 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:04:34.423 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:04:34.423 -08 000000100 INF: ===================Camera #0 Frame #17===================
17-02-28 20:04:34.425 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:04:34.425 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:04:34.425 -08 000000032 INF: ===================Camera #2 Frame #17===================
17-02-28 20:04:34.434 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:34.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 8 of 10 seconds left===================
17-02-28 20:04:34.558 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.591 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:34.591 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:34.591 -08 000000100 INF: ===================Camera #0 Frame #23===================
17-02-28 20:04:34.594 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:34.594 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:34.594 -08 000000032 INF: ===================Camera #2 Frame #23===================
17-02-28 20:04:34.697 -08 000000031 INF: Y Motor: Unshifted Position: 5487854
17-02-28 20:04:34.747 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.760 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:04:34.760 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:04:34.760 -08 000000100 INF: ===================Camera #0 Frame #29===================
17-02-28 20:04:34.763 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:04:34.763 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:04:34.763 -08 000000032 INF: ===================Camera #2 Frame #29===================
17-02-28 20:04:34.871 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.928 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:04:34.928 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:04:34.928 -08 000000100 INF: ===================Camera #0 Frame #35===================
17-02-28 20:04:34.932 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:04:34.932 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:04:34.932 -08 000000032 INF: ===================Camera #2 Frame #36===================
17-02-28 20:04:35.007 -08 000000031 INF: Y Motor: Unshifted Position: 5285050
17-02-28 20:04:35.057 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:35.096 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:04:35.096 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:04:35.096 -08 000000100 INF: ===================Camera #0 Frame #42===================
17-02-28 20:04:35.104 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:04:35.104 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:04:35.104 -08 000000032 INF: ===================Camera #2 Frame #42===================
17-02-28 20:04:35.185 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:35.270 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:04:35.270 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:04:35.270 -08 000000100 INF: ===================Camera #0 Frame #48===================
17-02-28 20:04:35.275 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:04:35.275 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:04:35.275 -08 000000032 INF: ===================Camera #2 Frame #48===================
17-02-28 20:04:35.319 -08 000000031 INF: Y Motor: Unshifted Position: 5080725
17-02-28 20:04:35.369 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:35.440 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:04:35.440 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:04:35.440 -08 000000100 INF: ===================Camera #0 Frame #54===================
17-02-28 20:04:35.446 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:04:35.446 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:04:35.446 -08 000000032 INF: ===================Camera #2 Frame #54===================
17-02-28 20:04:35.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:35.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 7 of 10 seconds left===================
17-02-28 20:04:35.493 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:35.610 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:04:35.610 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:04:35.610 -08 000000100 INF: ===================Camera #0 Frame #60===================
17-02-28 20:04:35.616 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:04:35.616 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:04:35.616 -08 000000032 INF: ===================Camera #2 Frame #61===================
17-02-28 20:04:35.632 -08 000000031 INF: Y Motor: Unshifted Position: 4878363
17-02-28 20:04:35.682 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:35.778 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:04:35.778 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:04:35.778 -08 000000100 INF: ===================Camera #0 Frame #67===================
17-02-28 20:04:35.789 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:04:35.789 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:04:35.789 -08 000000032 INF: ===================Camera #2 Frame #67===================
17-02-28 20:04:35.806 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:35.945 -08 000000031 INF: Y Motor: Unshifted Position: 4676864
17-02-28 20:04:35.951 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:04:35.951 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:04:35.951 -08 000000100 INF: ===================Camera #0 Frame #73===================
17-02-28 20:04:35.960 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:04:35.961 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:04:35.961 -08 000000032 INF: ===================Camera #2 Frame #73===================
17-02-28 20:04:35.995 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.117 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.121 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:04:36.121 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:04:36.121 -08 000000100 INF: ===================Camera #0 Frame #79===================
17-02-28 20:04:36.132 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:04:36.132 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:04:36.132 -08 000000032 INF: ===================Camera #2 Frame #80===================
17-02-28 20:04:36.257 -08 000000031 INF: Y Motor: Unshifted Position: 4472535
17-02-28 20:04:36.292 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:04:36.292 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:04:36.292 -08 000000100 INF: ===================Camera #0 Frame #86===================
17-02-28 20:04:36.307 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.307 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:04:36.307 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:04:36.307 -08 000000032 INF: ===================Camera #2 Frame #86===================
17-02-28 20:04:36.431 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:36.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left===================
17-02-28 20:04:36.465 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:04:36.465 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:04:36.465 -08 000000100 INF: ===================Camera #0 Frame #92===================
17-02-28 20:04:36.478 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:04:36.478 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:04:36.478 -08 000000032 INF: ===================Camera #2 Frame #92===================
17-02-28 20:04:36.570 -08 000000031 INF: Y Motor: Unshifted Position: 4271040
17-02-28 20:04:36.620 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.635 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:04:36.635 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:04:36.635 -08 000000100 INF: ===================Camera #0 Frame #98===================
17-02-28 20:04:36.649 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:04:36.649 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:04:36.649 -08 000000032 INF: ===================Camera #2 Frame #99===================
17-02-28 20:04:36.744 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.804 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:04:36.804 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:04:36.804 -08 000000100 INF: ===================Camera #0 Frame #104===================
17-02-28 20:04:36.823 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:04:36.823 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:04:36.823 -08 000000032 INF: ===================Camera #2 Frame #105===================
17-02-28 20:04:36.880 -08 000000031 INF: Y Motor: Unshifted Position: 4067365
17-02-28 20:04:36.930 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.974 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:04:36.974 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:04:36.974 -08 000000100 INF: ===================Camera #0 Frame #111===================
17-02-28 20:04:36.994 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:04:36.994 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:04:36.994 -08 000000032 INF: ===================Camera #2 Frame #111===================
17-02-28 20:04:37.055 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:37.147 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:04:37.147 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:04:37.147 -08 000000100 INF: ===================Camera #0 Frame #117===================
17-02-28 20:04:37.165 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:04:37.165 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:04:37.165 -08 000000032 INF: ===================Camera #2 Frame #118===================
17-02-28 20:04:37.194 -08 000000031 INF: Y Motor: Unshifted Position: 3863917
17-02-28 20:04:37.244 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:37.317 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:04:37.317 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:04:37.317 -08 000000100 INF: ===================Camera #0 Frame #123===================
17-02-28 20:04:37.339 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:04:37.339 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:04:37.339 -08 000000032 INF: ===================Camera #2 Frame #124===================
17-02-28 20:04:37.368 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:37.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:37.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 5 of 10 seconds left===================
17-02-28 20:04:37.487 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:04:37.487 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:04:37.487 -08 000000100 INF: ===================Camera #0 Frame #130===================
17-02-28 20:04:37.504 -08 000000031 INF: Y Motor: Unshifted Position: 3661547
17-02-28 20:04:37.510 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:04:37.510 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:04:37.510 -08 000000032 INF: ===================Camera #2 Frame #130===================
17-02-28 20:04:37.554 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:37.660 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:04:37.660 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:04:37.660 -08 000000100 INF: ===================Camera #0 Frame #136===================
17-02-28 20:04:37.678 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:37.681 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:04:37.681 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:04:37.681 -08 000000032 INF: ===================Camera #2 Frame #137===================
17-02-28 20:04:37.817 -08 000000031 INF: Y Motor: Unshifted Position: 3458101
17-02-28 20:04:37.830 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:04:37.830 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:04:37.830 -08 000000100 INF: ===================Camera #0 Frame #142===================
17-02-28 20:04:37.855 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:04:37.855 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:04:37.855 -08 000000032 INF: ===================Camera #2 Frame #143===================
17-02-28 20:04:37.867 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:37.991 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:38.000 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:04:38.000 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:04:38.000 -08 000000100 INF: ===================Camera #0 Frame #148===================
17-02-28 20:04:38.026 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:04:38.026 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:04:38.026 -08 000000032 INF: ===================Camera #2 Frame #149===================
17-02-28 20:04:38.131 -08 000000031 INF: Y Motor: Unshifted Position: 3256388
17-02-28 20:04:38.170 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:04:38.170 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:04:38.170 -08 000000100 INF: ===================Camera #0 Frame #155===================
17-02-28 20:04:38.181 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:38.197 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:04:38.197 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:04:38.197 -08 000000032 INF: ===================Camera #2 Frame #156===================
17-02-28 20:04:38.304 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:38.344 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:04:38.344 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:04:38.344 -08 000000100 INF: ===================Camera #0 Frame #161===================
17-02-28 20:04:38.372 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:04:38.372 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:04:38.372 -08 000000032 INF: ===================Camera #2 Frame #162===================
17-02-28 20:04:38.440 -08 000000031 INF: Y Motor: Unshifted Position: 3052939
17-02-28 20:04:38.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:38.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 4 of 10 seconds left===================
17-02-28 20:04:38.490 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:38.514 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:04:38.514 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:04:38.514 -08 000000100 INF: ===================Camera #0 Frame #167===================
17-02-28 20:04:38.542 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:04:38.542 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:04:38.542 -08 000000032 INF: ===================Camera #2 Frame #168===================
17-02-28 20:04:38.614 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:38.684 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:04:38.684 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:04:38.684 -08 000000100 INF: ===================Camera #0 Frame #174===================
17-02-28 20:04:38.713 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:04:38.713 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:04:38.713 -08 000000032 INF: ===================Camera #2 Frame #175===================
17-02-28 20:04:38.753 -08 000000031 INF: Y Motor: Unshifted Position: 2849278
17-02-28 20:04:38.803 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:38.857 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:04:38.857 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:04:38.857 -08 000000100 INF: ===================Camera #0 Frame #180===================
17-02-28 20:04:38.887 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:04:38.887 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:04:38.887 -08 000000032 INF: ===================Camera #2 Frame #181===================
17-02-28 20:04:38.928 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.027 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:04:39.027 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:04:39.027 -08 000000100 INF: ===================Camera #0 Frame #186===================
17-02-28 20:04:39.058 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:04:39.058 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:04:39.058 -08 000000032 INF: ===================Camera #2 Frame #187===================
17-02-28 20:04:39.063 -08 000000031 INF: Y Motor: Unshifted Position: 2647776
17-02-28 20:04:39.113 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.197 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:04:39.197 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:04:39.197 -08 000000100 INF: ===================Camera #0 Frame #193===================
17-02-28 20:04:39.229 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:04:39.229 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:04:39.229 -08 000000032 INF: ===================Camera #2 Frame #194===================
17-02-28 20:04:39.240 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.370 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:04:39.370 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:04:39.370 -08 000000100 INF: ===================Camera #0 Frame #199===================
17-02-28 20:04:39.376 -08 000000031 INF: Y Motor: Unshifted Position: 2444118
17-02-28 20:04:39.403 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:04:39.403 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:04:39.403 -08 000000032 INF: ===================Camera #2 Frame #200===================
17-02-28 20:04:39.426 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:39.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 3 of 10 seconds left===================
17-02-28 20:04:39.540 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:04:39.540 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:04:39.540 -08 000000100 INF: ===================Camera #0 Frame #205===================
17-02-28 20:04:39.550 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.574 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:04:39.574 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:04:39.574 -08 000000032 INF: ===================Camera #2 Frame #206===================
17-02-28 20:04:39.689 -08 000000031 INF: Y Motor: Unshifted Position: 2240663
17-02-28 20:04:39.710 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:04:39.710 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:04:39.710 -08 000000100 INF: ===================Camera #0 Frame #211===================
17-02-28 20:04:39.739 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.745 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:04:39.745 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:04:39.745 -08 000000032 INF: ===================Camera #2 Frame #213===================
17-02-28 20:04:39.863 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.880 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:04:39.880 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:04:39.880 -08 000000100 INF: ===================Camera #0 Frame #218===================
17-02-28 20:04:39.919 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:04:39.919 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:04:39.919 -08 000000032 INF: ===================Camera #2 Frame #219===================
17-02-28 20:04:40.001 -08 000000031 INF: Y Motor: Unshifted Position: 2038952
17-02-28 20:04:40.051 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:40.053 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:04:40.053 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:04:40.053 -08 000000100 INF: ===================Camera #0 Frame #224===================
17-02-28 20:04:40.090 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:04:40.090 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:04:40.090 -08 000000032 INF: ===================Camera #2 Frame #225===================
17-02-28 20:04:40.175 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:40.223 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:04:40.223 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:04:40.223 -08 000000100 INF: ===================Camera #0 Frame #230===================
17-02-28 20:04:40.261 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:04:40.261 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:04:40.261 -08 000000032 INF: ===================Camera #2 Frame #232===================
17-02-28 20:04:40.313 -08 000000031 INF: Y Motor: Unshifted Position: 1834848
17-02-28 20:04:40.363 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:40.393 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:04:40.393 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:04:40.393 -08 000000100 INF: ===================Camera #0 Frame #237===================
17-02-28 20:04:40.436 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:04:40.436 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:04:40.436 -08 000000032 INF: ===================Camera #2 Frame #238===================
17-02-28 20:04:40.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:40.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 2 of 10 seconds left===================
17-02-28 20:04:40.487 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:40.566 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:04:40.566 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:04:40.566 -08 000000100 INF: ===================Camera #0 Frame #243===================
17-02-28 20:04:40.607 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:04:40.607 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:04:40.607 -08 000000032 INF: ===================Camera #2 Frame #244===================
17-02-28 20:04:40.623 -08 000000031 INF: Y Motor: Unshifted Position: 1633131
17-02-28 20:04:40.673 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:40.743 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:04:40.743 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:04:40.744 -08 000000100 INF: ===================Camera #0 Frame #249===================
17-02-28 20:04:40.779 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:04:40.779 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:04:40.779 -08 000000032 INF: ===================Camera #2 Frame #251===================
17-02-28 20:04:40.800 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:40.914 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:04:40.914 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:04:40.914 -08 000000100 INF: ===================Camera #0 Frame #256===================
17-02-28 20:04:40.937 -08 000000031 INF: Y Motor: Unshifted Position: 1429028
17-02-28 20:04:40.953 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:04:40.953 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:04:40.953 -08 000000032 INF: ===================Camera #2 Frame #257===================
17-02-28 20:04:40.987 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:41.087 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:04:41.087 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:04:41.087 -08 000000100 INF: ===================Camera #0 Frame #262===================
17-02-28 20:04:41.111 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:41.124 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:04:41.124 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:04:41.124 -08 000000032 INF: ===================Camera #2 Frame #263===================
17-02-28 20:04:41.247 -08 000000031 INF: Y Motor: Unshifted Position: 1227298
17-02-28 20:04:41.257 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:04:41.257 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:04:41.257 -08 000000100 INF: ===================Camera #0 Frame #268===================
17-02-28 20:04:41.295 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:04:41.295 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:04:41.295 -08 000000032 INF: ===================Camera #2 Frame #270===================
17-02-28 20:04:41.297 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:41.372 -08 000000062 INF: FPGA: Recv TDIYWAIT
17-02-28 20:04:41.372 -08 000000090 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:41.374 -08 000000090 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:04:41.375 -08 000000045 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:04:41.375 -08 000000078 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:04:41.375 -08 000000045 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:04:41.375 -08 000000045 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:04:41.375 -08 000000045 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:04:41.375 -08 000000045 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:04:41.375 -08 000000078 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:04:41.375 -08 000000078 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:04:41.375 -08 000000078 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:04:41.376 -08 000000078 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:04:41.424 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:41.427 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:04:41.427 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:04:41.427 -08 000000100 INF: ===================Camera #0 Frame #272===================
17-02-28 20:04:41.440 -08 000000100 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:04:41.441 -08 000000100 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:41.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:41.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 1 of 10 seconds left===================
17-02-28 20:04:41.560 -08 000000031 INF: Y Motor: Unshifted Position: 1023851
17-02-28 20:04:41.572 -08 000000100 INF: Camera #0 ReleaseBuffer
17-02-28 20:04:41.572 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:04:41.572 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:04:41.572 -08 000000032 INF: ===================Camera #2 Frame #272===================
17-02-28 20:04:41.572 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:04:41.579 -08 000000032 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:04:41.580 -08 000000032 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:41.603 -08 000000100 INF: ======================================
17-02-28 20:04:41.610 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:41.747 -08 000000054 INF: FPGA: Recv EX1MV
17-02-28 20:04:41.747 -08 000000054 INF: FPGA: Recv EX2MV
17-02-28 20:04:41.747 -08 000000045 INF: Excitation Filter 1: Moved 107 steps in 371.9941 ms
17-02-28 20:04:41.747 -08 000000078 INF: Excitation Filter 2: Moved 107 steps in 371.7918 ms
17-02-28 20:04:41.747 -08 000000045 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.0917 ms
17-02-28 20:04:41.747 -08 000000045 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.2359 ms
17-02-28 20:04:41.747 -08 000000078 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.9234 ms
17-02-28 20:04:41.747 -08 000000078 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.1948 ms
17-02-28 20:04:41.747 -08 000000045 INF: ======================================
17-02-28 20:04:41.747 -08 000000078 INF: ======================================
17-02-28 20:04:41.748 -08 000000032 INF: Camera #2 ReleaseBuffer
17-02-28 20:04:41.748 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:04:41.749 -08 000000090 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:41.749 -08 000000031 INF: Y Motor: Unshifted Position: 990683
17-02-28 20:04:41.749 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:41.749 -08 000000031 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:41.750 -08 000000090 INF: ======================================
17-02-28 20:04:41.783 -08 000000032 INF: ======================================
17-02-28 20:04:41.784 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:04:41.785 -08 000000095 INF: ======================================
17-02-28 20:04:41.811 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:04:41.811 -08 000000031 INF: Y Motor: Moved to 14.9068 after 7863 ms
17-02-28 20:04:41.811 -08 000000031 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:41.873 -08 000000031 INF: Y Motor: Recv v 4097\r
17-02-28 20:04:41.873 -08 000000031 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:41.873 -08 000000031 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:41.935 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:04:41.935 -08 000000031 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:41.935 -08 000000031 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:41.997 -08 000000031 INF: Y Motor: Recv v 134217728\r
17-02-28 20:04:41.997 -08 000000031 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:04:41.997 -08 000000031 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:41.997 -08 000000031 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:42.059 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:04:42.059 -08 000000031 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:42.059 -08 000000031 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:42.059 -08 000000031 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:42.123 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:42.123 -08 000000031 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:42.123 -08 000000031 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:42.183 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:42.183 -08 000000031 INF: ======================================
17-02-28 20:04:42.184 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:42.185 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:42.186 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.187 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:04:42.247 -08 000000034 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:04:42.247 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:42.306 -08 000000038 INF: FPGA: Recv TDIYERD 1490682
17-02-28 20:04:42.306 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:04:42.368 -08 000000097 INF: FPGA: Recv ZADCR 35183
17-02-28 20:04:42.368 -08 000000042 INF: At scan end Y pos = 14.907 and Z pos = -0.135. Y moved -48.539 mm
17-02-28 20:04:42.368 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:04:42.433 -08 000000040 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:04:42.433 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:04:42.433 -08 000000042 INF: TDIScan finished after 12872.2498 ms
17-02-28 20:04:42.433 -08 000000042 INF: Image[0]: Y should trigger at 63.446 mm, 2nd row was at 64.355 mm (error = 0.909 mm)
17-02-28 20:04:42.433 -08 000000042 INF: Image[2]: Y should trigger at 63.446 mm, 2nd row was at 64.355 mm (error = 0.909 mm)
17-02-28 20:04:42.435 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:42.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:42.448 -08 000000018 INF: WaitCommand(10000) end
17-02-28 20:04:42.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:42.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:42.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:04:42.450 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:04:42.450 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:04:42.451 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:04:42.451 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:42.469 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.715 um
17-02-28 20:04:42.469 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.470 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:04:42.495 -08 000000101 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:04:42.495 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.496 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:42.496 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB1 (4)===================
17-02-28 20:04:42.496 -08 000000018 INF: Valve A1: Go to position 4
17-02-28 20:04:42.496 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:04:42.496 -08 000000098 INF: ===================Dither Clean Up Command===================
17-02-28 20:04:42.496 -08 000000062 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:04:42.496 -08 000000039 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:04:42.496 -08 000000094 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:04:42.497 -08 000000062 INF: ======================================
17-02-28 20:04:42.497 -08 000000094 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:04:42.497 -08 000000094 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:04:42.497 -08 000000039 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:42.497 -08 000000039 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:42.497 -08 000000031 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:04:42.497 -08 000000045 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:04:42.497 -08 000000045 INF: ======================================
17-02-28 20:04:42.498 -08 000000031 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:04:42.557 -08 000000067 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:42.557 -08 000000067 INF: FPGA: Recv ZSEL 
17-02-28 20:04:42.557 -08 000000031 INF: FPGA: Xmit ZDACW 40228\n
17-02-28 20:04:42.557 -08 000000094 INF: ======================================
17-02-28 20:04:42.558 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 7\r
17-02-28 20:04:42.558 -08 000000018 INF: Valve A1: 38.219 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:04:42.558 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 7 to 4
17-02-28 20:04:42.558 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC4\r
17-02-28 20:04:42.558 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:04:42.558 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:04:42.559 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:04:42.559 -08 000000039 INF: ======================================
17-02-28 20:04:42.619 -08 000000032 INF: FPGA: Recv ZDACW 
17-02-28 20:04:42.619 -08 000000031 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:04:42.619 -08 000000031 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:04:42.681 -08 000000040 INF: FPGA: Recv TDIBB
17-02-28 20:04:42.681 -08 000000031 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:04:42.682 -08 000000031 INF: ======================================
17-02-28 20:04:42.683 -08 000000098 INF: ======================================
17-02-28 20:04:42.684 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.685 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:04:42.685 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.685 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:04:42.685 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:04:42.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:04:42.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:04:42.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:04:42.687 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB1 (4), Waiting for image analysis===================
17-02-28 20:04:42.687 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB1 (4)===================
17-02-28 20:04:42.687 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:04:42.688 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:04:42.710 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:04:42.711 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:42.711 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:42.711 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:42.711 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:04:42.712 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:42.712 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface===================
17-02-28 20:04:42.728 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:42.729 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:42.729 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:42.730 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:42.760 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1201 Request: {"Cycle":2,"Lane":3,"Tile":1201,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF194","HCSMMF237","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.831 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:42.832 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:42.832 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:04:42.832 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:04:42.914 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1209 Request: {"Cycle":2,"Lane":3,"Tile":1209,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF269","HCSMMF278","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.925 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1208 Request: {"Cycle":2,"Lane":3,"Tile":1208,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF206","HCSMMF224","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.931 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1203 Request: {"Cycle":2,"Lane":3,"Tile":1203,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF213","HCSMMF230","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.940 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1212 Request: {"Cycle":2,"Lane":3,"Tile":1212,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF198","HCSMMF218","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.949 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1206 Request: {"Cycle":2,"Lane":3,"Tile":1206,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF229","HCSMMF217","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.952 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1205 Request: {"Cycle":2,"Lane":3,"Tile":1205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF193","HCSMMF273","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.980 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 4\r
17-02-28 20:04:42.981 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:04:42.981 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-02-28 20:04:42.985 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1213 Request: {"Cycle":2,"Lane":3,"Tile":1213,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF195","HCSMMF254","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.989 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1211 Request: {"Cycle":2,"Lane":3,"Tile":1211,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF286","HCSMMF204","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.989 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1204 Request: {"Cycle":2,"Lane":3,"Tile":1204,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF248","HCSMMF228","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.990 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1202 Request: {"Cycle":2,"Lane":3,"Tile":1202,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF239","HCSMMF191","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.991 -08 000000004 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1207 Request: {"Cycle":2,"Lane":3,"Tile":1207,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF202","HCSMMF222","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.992 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1216 Request: {"Cycle":2,"Lane":3,"Tile":1216,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF232","HCSMMF227","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.992 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1210 Request: {"Cycle":2,"Lane":3,"Tile":1210,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF281","HCSMMF182","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.993 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1214 Request: {"Cycle":2,"Lane":3,"Tile":1214,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF235","HCSMMF251","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.994 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1217 Request: {"Cycle":2,"Lane":3,"Tile":1217,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF284","HCSMMF268","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.994 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1221 Request: {"Cycle":2,"Lane":3,"Tile":1221,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF190","HCSMMF243","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.995 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1220 Request: {"Cycle":2,"Lane":3,"Tile":1220,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF271","HCSMMF178","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.997 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1226 Request: {"Cycle":2,"Lane":3,"Tile":1226,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF274","HCSMMF211","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.997 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1222 Request: {"Cycle":2,"Lane":3,"Tile":1222,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF247","HCSMMF219","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.998 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1225 Request: {"Cycle":2,"Lane":3,"Tile":1225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF253","HCSMMF200","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.999 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1223 Request: {"Cycle":2,"Lane":3,"Tile":1223,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF245","HCSMMF214","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.000 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1219 Request: {"Cycle":2,"Lane":3,"Tile":1219,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF180","HCSMMF246","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.001 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1224 Request: {"Cycle":2,"Lane":3,"Tile":1224,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF184","HCSMMF250","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.001 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1227 Request: {"Cycle":2,"Lane":3,"Tile":1227,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF277","HCSMMF283","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.003 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1228 Request: {"Cycle":2,"Lane":3,"Tile":1228,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF201","HCSMMF252","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.004 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1215 Request: {"Cycle":2,"Lane":3,"Tile":1215,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF176","HCSMMF264","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.006 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1218 Request: {"Cycle":2,"Lane":3,"Tile":1218,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF231","HCSMMF258","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.009 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:43.015 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:04:43.102 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:43.102 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:04:43.140 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:43.146 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:04:43.226 -08 000000080 INF: FPGA: Recv MIOCOMPR
17-02-28 20:04:43.226 -08 000000042 INF: Compensator: Moved OutOfPath in 394 ms
17-02-28 20:04:43.226 -08 000000042 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:04:43.227 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:43.228 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:43.228 -08 000000034 INF: ===================Move Tilt Motor 1===================
17-02-28 20:04:43.228 -08 000000100 INF: ===================Move Tilt Motor 3===================
17-02-28 20:04:43.228 -08 000000097 INF: ===================Move Tilt Motor 2===================
17-02-28 20:04:43.229 -08 000000034 INF: ======================================
17-02-28 20:04:43.229 -08 000000100 INF: ======================================
17-02-28 20:04:43.229 -08 000000097 INF: ======================================
17-02-28 20:04:43.230 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:43.231 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:43.235 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:43.240 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:04:43.241 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:04:43.251 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:04:43.251 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:04:43.251 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:04:43.251 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:43.252 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:43.255 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:04:43.255 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:04:43.255 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:04:43.291 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:43.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:43.292 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:04:43.292 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1535 mm
17-02-28 20:04:43.292 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:04:43.343 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:43.348 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:04:43.352 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:04:43.352 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:43.353 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:43.355 -08 000000047 INF: FPGA: Recv ZTRG 
17-02-28 20:04:43.356 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:04:43.415 -08 000000063 INF: FPGA: Recv ZYT 
17-02-28 20:04:43.415 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:04:43.415 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:04:43.416 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:43.424 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 4, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 80, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:04:43.434 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:43.477 -08 000000097 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:04:43.477 -08 000000097 INF: FPGA: Recv ZMV 
17-02-28 20:04:43.477 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:04:43.477 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.796 ms
17-02-28 20:04:43.477 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:04:43.516 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:04:43.541 -08 000000065 INF: FPGA: Recv ZDACR 60292
17-02-28 20:04:43.542 -08 000000042 INF: Z Motor: MoveAndTrigger took 249.8406 ms w/comms
17-02-28 20:04:43.542 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:04:43.542 -08 000000042 INF: Z Motor: MoveAbsStepped took 250.0227 ms
17-02-28 20:04:43.542 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:43.543 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:04:43.552 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:04:43.552 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:43.552 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:43.552 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:04:43.552 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:04:43.604 -08 000000039 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:43.604 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:04:43.604 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:04:43.614 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:43.614 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:04:43.623 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:04:43.623 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:43.623 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:43.625 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:43.625 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:04:43.626 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:43.626 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = D_1
17-02-28 20:04:43.626 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:43.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:43.627 -08 000000036 INF: ===================MoveEmissionFilters===================
17-02-28 20:04:43.627 -08 000000084 INF: ===================Move X,Y===================
17-02-28 20:04:43.628 -08 000000084 INF: ===================Move X,Y, Parallel===================
17-02-28 20:04:43.628 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:43.628 -08 000000064 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:43.628 -08 000000102 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:43.629 -08 000000093 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:43.629 -08 000000047 INF: ===================Move X Motor without settling===================
17-02-28 20:04:43.629 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:43.629 -08 000000102 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:43.629 -08 000000047 INF: X Motor: Xmit PR VM\n
17-02-28 20:04:43.629 -08 000000093 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:43.630 -08 000000033 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:43.630 -08 000000078 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:04:43.630 -08 000000070 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:04:43.630 -08 000000032 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:04:43.630 -08 000000054 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:04:43.630 -08 000000030 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:04:43.630 -08 000000063 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:04:43.630 -08 000000033 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9068 mm
17-02-28 20:04:43.630 -08 000000063 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:04:43.631 -08 000000054 INF: ======================================
17-02-28 20:04:43.631 -08 000000070 INF: ======================================
17-02-28 20:04:43.631 -08 000000033 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:43.631 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:43.632 -08 000000030 INF: ======================================
17-02-28 20:04:43.632 -08 000000064 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:43.632 -08 000000102 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:43.633 -08 000000070 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:04:43.633 -08 000000092 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:04:43.633 -08 000000092 INF: ======================================
17-02-28 20:04:43.633 -08 000000078 INF: ======================================
17-02-28 20:04:43.633 -08 000000070 INF: ======================================
17-02-28 20:04:43.634 -08 000000063 INF: ======================================
17-02-28 20:04:43.634 -08 000000102 INF: ======================================
17-02-28 20:04:43.634 -08 000000032 INF: ======================================
17-02-28 20:04:43.635 -08 000000064 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:43.635 -08 000000093 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:43.635 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:43.636 -08 000000064 INF: ======================================
17-02-28 20:04:43.636 -08 000000093 INF: ======================================
17-02-28 20:04:43.637 -08 000000067 INF: ======================================
17-02-28 20:04:43.637 -08 000000036 INF: ======================================
17-02-28 20:04:43.665 -08 000000047 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:04:43.665 -08 000000047 INF: X Motor: Xmit PR VI\n
17-02-28 20:04:43.665 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:04:43.665 -08 000000033 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:43.665 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:43.704 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:04:43.722 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:04:43.731 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:04:43.731 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:43.731 -08 000000047 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:04:43.731 -08 000000047 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:04:43.731 -08 000000047 INF: X Motor: Moving to 77.4806 mm @15.000 mm/sec, started at 75.2451 mm
17-02-28 20:04:43.731 -08 000000047 INF: X Motor: Xmit MA 7570\n
17-02-28 20:04:43.789 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:43.790 -08 000000047 INF: X Motor: Recv MA 7570\r\n>
17-02-28 20:04:43.790 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:04:43.790 -08 000000033 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:43.790 -08 000000047 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:04:43.790 -08 000000033 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:04:43.790 -08 000000033 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:04:43.852 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:04:43.852 -08 000000033 INF: Y Motor: Start the move command
17-02-28 20:04:43.852 -08 000000033 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:43.889 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:43.916 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:43.917 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:04:43.917 -08 000000033 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:04:43.917 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.042 -08 000000033 INF: Y Motor: Unshifted Position: 1075662
17-02-28 20:04:44.092 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.166 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:44.215 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.226 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:44.326 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:04:44.355 -08 000000033 INF: Y Motor: Unshifted Position: 1779847
17-02-28 20:04:44.405 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.414 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:44.414 -08 000000047 INF: X Motor: Xmit PR ER\n
17-02-28 20:04:44.476 -08 000000047 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:04:44.476 -08 000000047 INF: X Motor: Moved to 77.4814 after 686 ms
17-02-28 20:04:44.476 -08 000000047 INF: ======================================
17-02-28 20:04:44.514 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:44.526 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.540 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:44.540 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB===================
17-02-28 20:04:44.640 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP15360R\r
17-02-28 20:04:44.667 -08 000000033 INF: Y Motor: Unshifted Position: 2559868
17-02-28 20:04:44.717 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.727 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:44.827 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:44.841 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.914 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:44.977 -08 000000033 INF: Y Motor: Unshifted Position: 3345635
17-02-28 20:04:45.027 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:45.154 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:45.164 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:45.224 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:45.291 -08 000000033 INF: Y Motor: Unshifted Position: 4120713
17-02-28 20:04:45.341 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:45.464 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:45.474 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:45.538 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:45.603 -08 000000033 INF: Y Motor: Unshifted Position: 4920677
17-02-28 20:04:45.653 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:45.775 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:45.788 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:45.850 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:45.913 -08 000000033 INF: Y Motor: Unshifted Position: 5684613
17-02-28 20:04:45.963 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:46.086 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:46.100 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:46.161 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:46.226 -08 000000033 INF: Y Motor: Unshifted Position: 5953354
17-02-28 20:04:46.226 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:46.226 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:46.289 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:04:46.289 -08 000000033 INF: Y Motor: Moved to 64.5335 after 2371 ms
17-02-28 20:04:46.289 -08 000000033 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:46.349 -08 000000033 INF: Y Motor: Recv v 4096\r
17-02-28 20:04:46.349 -08 000000033 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:46.349 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:46.412 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:46.413 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:04:46.413 -08 000000033 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:46.413 -08 000000033 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:46.475 -08 000000033 INF: Y Motor: Recv v 402653184\r
17-02-28 20:04:46.475 -08 000000033 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:04:46.475 -08 000000033 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:46.475 -08 000000033 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:46.476 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:46.540 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:04:46.540 -08 000000033 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:46.540 -08 000000033 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:46.540 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:46.600 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:04:46.600 -08 000000033 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:46.600 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:46.663 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:04:46.663 -08 000000033 INF: ======================================
17-02-28 20:04:46.664 -08 000000084 INF: ===================Move X,Y===================
17-02-28 20:04:46.665 -08 000000084 INF: ======================================
17-02-28 20:04:46.667 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:46.667 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:46.667 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:04:46.668 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:04:46.725 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:46.725 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:04:46.726 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:46.785 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:04:46.785 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:04:46.786 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:46.786 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:46.786 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:46.846 -08 000000069 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:04:46.846 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:04:46.847 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:46.847 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:46.848 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:04:46.848 -08 000000044 INF: ===================Set YMotor gains for scans===================
17-02-28 20:04:46.849 -08 000000044 INF: ======================================
17-02-28 20:04:46.849 -08 000000095 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:04:46.849 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:04:46.850 -08 000000095 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:04:46.851 -08 000000095 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:04:46.851 -08 000000095 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:04:46.911 -08 000000059 INF: FPGA: Recv TDIYPOS
17-02-28 20:04:46.911 -08 000000095 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:04:46.913 -08 000000095 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:04:46.913 -08 000000095 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:04:46.974 -08 000000045 INF: FPGA: Recv TDIYARM2
17-02-28 20:04:46.975 -08 000000095 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:04:46.976 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:04:46.978 -08 000000095 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:04:46.978 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:04:46.979 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:04:46.980 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:04:46.981 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:47.036 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:47.099 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:47.347 -08 000000095 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:04:47.347 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:04:47.347 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:47.349 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:47.362 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:04:47.364 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:47.411 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:47.661 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:47.721 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:47.742 -08 000000095 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:04:47.742 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:04:47.742 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:47.757 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:04:47.758 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:04:47.760 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:04:47.761 -08 000000095 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:47.762 -08 000000095 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:04:47.762 -08 000000095 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:47.764 -08 000000095 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:04:47.764 -08 000000095 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:04:47.764 -08 000000095 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:04:47.764 -08 000000095 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:04:47.782 -08 000000033 INF: FPGA: Recv ZYT 
17-02-28 20:04:47.782 -08 000000095 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:04:47.782 -08 000000095 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:04:47.849 -08 000000069 INF: FPGA: Recv ZARM
17-02-28 20:04:47.850 -08 000000095 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 67.7479 ms
17-02-28 20:04:47.850 -08 000000095 INF: Z Motor: ArmAbsStepped took 85.8187 ms
17-02-28 20:04:47.850 -08 000000095 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:47.851 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:04:47.852 -08 000000095 INF: ======================================
17-02-28 20:04:47.854 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:47.854 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:47.855 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:47.855 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:47.856 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:47.857 -08 000000032 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:04:47.857 -08 000000100 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:04:47.857 -08 000000032 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:04:47.857 -08 000000032 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:04:47.857 -08 000000032 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:04:47.857 -08 000000032 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:04:47.857 -08 000000100 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:04:47.857 -08 000000100 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:04:47.857 -08 000000100 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:04:47.858 -08 000000100 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:04:47.971 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:48.034 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:48.221 -08 000000059 INF: FPGA: Recv EX2MV
17-02-28 20:04:48.221 -08 000000059 INF: FPGA: Recv EX1MV
17-02-28 20:04:48.221 -08 000000032 INF: Excitation Filter 2: Moved -107 steps in 364.1224 ms
17-02-28 20:04:48.221 -08 000000100 INF: Excitation Filter 1: Moved -107 steps in 363.9919 ms
17-02-28 20:04:48.221 -08 000000100 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 364.1717 ms
17-02-28 20:04:48.221 -08 000000100 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 364.2433 ms
17-02-28 20:04:48.221 -08 000000032 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 364.2329 ms
17-02-28 20:04:48.221 -08 000000032 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 364.6128 ms
17-02-28 20:04:48.222 -08 000000100 INF: ======================================
17-02-28 20:04:48.222 -08 000000032 INF: ======================================
17-02-28 20:04:48.223 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:48.224 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:48.225 -08 000000038 INF: ===================Serial===================
17-02-28 20:04:48.225 -08 000000065 INF: ===================Camera TDI===================
17-02-28 20:04:48.225 -08 000000031 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:48.225 -08 000000098 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:48.225 -08 000000098 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:04:48.226 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:48.226 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:48.226 -08 000000038 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:04:48.226 -08 000000065 INF: ===================Camera TDI, Parallel===================
17-02-28 20:04:48.226 -08 000000031 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:04:48.226 -08 000000038 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:04:48.227 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:04:48.227 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:04:48.227 -08 000000031 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:04:48.228 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.228 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.228 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.228 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.284 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:48.288 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:04:48.288 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:48.288 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:48.347 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:48.348 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:04:48.348 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:48.378 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.378 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.378 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.378 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.409 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:04:48.409 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:48.409 -08 000000098 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:04:48.409 -08 000000098 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:04:48.471 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:04:48.471 -08 000000098 INF: Y Motor: Start the move command
17-02-28 20:04:48.471 -08 000000098 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:48.528 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.528 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.528 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.528 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.533 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:04:48.533 -08 000000098 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:04:48.533 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:48.597 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:48.658 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:48.659 -08 000000098 INF: Y Motor: Unshifted Position: 5935033
17-02-28 20:04:48.678 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.678 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.678 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.678 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.709 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:48.828 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:04:48.828 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:04:48.828 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:04:48.828 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:04:48.828 -08 000000064 INF: ===================Camera #2 Frame #1===================
17-02-28 20:04:48.828 -08 000000036 INF: ===================Camera #0 Frame #1===================
17-02-28 20:04:48.834 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:48.908 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:48.970 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:48.971 -08 000000098 INF: Y Motor: Unshifted Position: 5888227
17-02-28 20:04:48.981 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:04:48.981 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:04:48.981 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:04:48.981 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:04:48.981 -08 000000036 INF: ===================Camera #0 Frame #3===================
17-02-28 20:04:48.981 -08 000000064 INF: ===================Camera #2 Frame #3===================
17-02-28 20:04:49.021 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:49.137 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:04:49.137 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:04:49.137 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:04:49.137 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:04:49.137 -08 000000064 INF: ===================Camera #2 Frame #4===================
17-02-28 20:04:49.137 -08 000000036 INF: ===================Camera #0 Frame #4===================
17-02-28 20:04:49.147 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:49.220 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:49.281 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:49.282 -08 000000098 INF: Y Motor: Unshifted Position: 5841472
17-02-28 20:04:49.290 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:49.290 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:49.290 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:49.290 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:49.290 -08 000000036 INF: ===================Camera #0 Frame #5===================
17-02-28 20:04:49.290 -08 000000064 INF: ===================Camera #2 Frame #5===================
17-02-28 20:04:49.332 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:49.342 -08 000000085 INF: FPGA: Recv ZWAIT 
17-02-28 20:04:49.342 -08 000000085 INF: FPGA: Recv TDIYWAIT
17-02-28 20:04:49.342 -08 000000031 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:49.343 -08 000000038 INF: ===================Serial===================
17-02-28 20:04:49.344 -08 000000031 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:04:49.344 -08 000000038 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:04:49.345 -08 000000038 INF: ===================Serial===================
17-02-28 20:04:49.345 -08 000000100 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:04:49.345 -08 000000044 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:04:49.345 -08 000000100 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:04:49.345 -08 000000100 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:04:49.345 -08 000000100 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:04:49.345 -08 000000100 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:04:49.345 -08 000000044 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:04:49.345 -08 000000044 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:04:49.345 -08 000000044 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:04:49.346 -08 000000044 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:04:49.346 -08 000000038 INF: ======================================
17-02-28 20:04:49.443 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:04:49.443 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:04:49.443 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:04:49.443 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:04:49.443 -08 000000064 INF: ===================Camera #2 Frame #6===================
17-02-28 20:04:49.443 -08 000000036 INF: ===================Camera #0 Frame #6===================
17-02-28 20:04:49.446 -08 000000064 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:04:49.446 -08 000000036 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:04:49.447 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:49.448 -08 000000036 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:49.459 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:49.471 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:04:49.471 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:04:49.472 -08 000000064 INF: ======================================
17-02-28 20:04:49.495 -08 000000036 INF: Camera #0 ReleaseBuffer
17-02-28 20:04:49.495 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:04:49.496 -08 000000036 INF: ======================================
17-02-28 20:04:49.497 -08 000000065 INF: ===================Camera TDI===================
17-02-28 20:04:49.499 -08 000000065 INF: ======================================
17-02-28 20:04:49.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:49.594 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:49.595 -08 000000098 INF: Y Motor: Unshifted Position: 5797050
17-02-28 20:04:49.645 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:49.719 -08 000000095 INF: FPGA: Recv EX1MV
17-02-28 20:04:49.719 -08 000000095 INF: FPGA: Recv EX2MV
17-02-28 20:04:49.719 -08 000000044 INF: Excitation Filter 2: Moved 107 steps in 373.5014 ms
17-02-28 20:04:49.719 -08 000000044 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.6041 ms
17-02-28 20:04:49.719 -08 000000044 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.685 ms
17-02-28 20:04:49.719 -08 000000100 INF: Excitation Filter 1: Moved 107 steps in 373.714 ms
17-02-28 20:04:49.719 -08 000000100 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.9166 ms
17-02-28 20:04:49.719 -08 000000100 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.9831 ms
17-02-28 20:04:49.719 -08 000000044 INF: ======================================
17-02-28 20:04:49.719 -08 000000100 INF: ======================================
17-02-28 20:04:49.721 -08 000000031 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:49.722 -08 000000031 INF: ======================================
17-02-28 20:04:49.783 -08 000000098 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:04:49.783 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:49.783 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:49.844 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:49.845 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:04:49.845 -08 000000098 INF: Y Motor: Moved to 62.9704 after 1312 ms
17-02-28 20:04:49.845 -08 000000098 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:49.907 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:49.908 -08 000000098 INF: Y Motor: Recv v 4097\r
17-02-28 20:04:49.908 -08 000000098 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:49.908 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:49.970 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:04:49.970 -08 000000098 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:49.970 -08 000000098 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:50.032 -08 000000098 INF: Y Motor: Recv v 134217728\r
17-02-28 20:04:50.032 -08 000000098 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:04:50.032 -08 000000098 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:50.032 -08 000000098 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:50.094 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:04:50.094 -08 000000098 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:50.094 -08 000000098 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:50.094 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:50.156 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:04:50.156 -08 000000098 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:50.156 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:50.157 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:50.217 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:50.218 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:04:50.218 -08 000000098 INF: ======================================
17-02-28 20:04:50.219 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:50.220 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:50.221 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.221 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:04:50.279 -08 000000073 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:04:50.279 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:50.343 -08 000000067 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:04:50.343 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:04:50.405 -08 000000054 INF: FPGA: Recv ZADCR 2425
17-02-28 20:04:50.405 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:04:50.405 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:04:50.465 -08 000000040 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:04:50.465 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:04:50.465 -08 000000042 INF: TDIScan finished after 6849.9294 ms
17-02-28 20:04:50.465 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:04:50.465 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:04:50.465 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:04:50.467 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:50.530 -08 000000101 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:04:50.530 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:50.531 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.532 -08 000000031 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:04:50.532 -08 000000030 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:04:50.532 -08 000000044 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:04:50.532 -08 000000031 INF: ======================================
17-02-28 20:04:50.532 -08 000000044 INF: ======================================
17-02-28 20:04:50.532 -08 000000030 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:50.532 -08 000000030 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:50.593 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:04:50.593 -08 000000030 INF: ======================================
17-02-28 20:04:50.594 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.595 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.596 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:04:50.637 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.637 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:04:50.666 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.666 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:04:50.695 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.695 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:04:50.723 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.723 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:50.723 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:50.724 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:04:50.732 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:50.732 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:04:50.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:04:50.781 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:50.842 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:51.092 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:51.154 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:51.404 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:51.418 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:04:51.441 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0879249157139598Best Z position at top surface = -0.159227103348627Best Z position at top surface + compensator offset = -0.136527103348627 C:2,L:4,T
17-02-28 20:04:51.442 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.159227103348627
17-02-28 20:04:51.442 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97314
17-02-28 20:04:51.442 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0879249157139598
17-02-28 20:04:51.442 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.62987
17-02-28 20:04:51.442 -08 000000042 INF: Z-height at LaneTopSurface is -0.159227103348627.
17-02-28 20:04:51.442 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:51.467 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:51.577 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:04:51.577 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:04:51.590 -08 000000032 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:51.590 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:51.592 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.592 -08 000000042 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:04:51.592 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.593 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.593 -08 000000069 INF: ===================Move Tilt Motor 1===================
17-02-28 20:04:51.593 -08 000000100 INF: ===================Move Tilt Motor 2===================
17-02-28 20:04:51.594 -08 000000070 INF: ===================Move Tilt Motor 3===================
17-02-28 20:04:51.594 -08 000000070 INF: ======================================
17-02-28 20:04:51.594 -08 000000069 INF: ======================================
17-02-28 20:04:51.594 -08 000000100 INF: ======================================
17-02-28 20:04:51.595 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.596 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.596 -08 000000042 INF: ETF Best Z: -0.1365271 mm (35789 DAC)
17-02-28 20:04:51.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.598 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:04:51.598 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:04:52.034 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:52.034 -08 000000084 INF: FPGA: Recv MIOCOMPF
17-02-28 20:04:52.034 -08 000000042 INF: Compensator: Moved IntoPath in 437 ms
17-02-28 20:04:52.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:52.036 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:52.042 -08 000000042 INF: Swath 1 position calculated to be: {X=76.92664, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:04:52.042 -08 000000042 INF: Swath 2 position calculated to be: {X=78.03464, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:04:52.048 -08 000000042 INF: Swath 0: Converted transform from (-42.15379, 3.876512) pixels to (-0.01449, 0.00138) mm.
17-02-28 20:04:52.054 -08 000000042 INF: Swath 1: Converted transform from (-71.32906, 2.367295) pixels to (-0.024495, 0.00069) mm.
17-02-28 20:04:52.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:04:52.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:04:52.055 -08 000000042 INF: Transformed XStagePosition from 76.92664 mm to 76.9121457422152 mm.
17-02-28 20:04:52.066 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5544693554994 mm.
17-02-28 20:04:52.066 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3544693554994 mm.
17-02-28 20:04:52.066 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4452193554994 mm.
17-02-28 20:04:52.068 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:52.069 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:04:52.069 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:52.069 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = D_1
17-02-28 20:04:52.077 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:52.078 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:52.078 -08 000000063 INF: ===================MoveEmissionFilters===================
17-02-28 20:04:52.078 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:52.079 -08 000000092 INF: ===================Move X,Y===================
17-02-28 20:04:52.079 -08 000000031 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:52.079 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:04:52.079 -08 000000070 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:52.079 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:52.079 -08 000000092 INF: ===================Move X,Y, Parallel===================
17-02-28 20:04:52.079 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:52.080 -08 000000031 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:52.080 -08 000000070 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:52.080 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:52.080 -08 000000095 INF: ===================Move X Motor without settling===================
17-02-28 20:04:52.080 -08 000000059 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:52.080 -08 000000095 INF: X Motor: Xmit PR VM\n
17-02-28 20:04:52.080 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:52.081 -08 000000059 INF: Y Motor: Moving to 64.5545 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:04:52.081 -08 000000059 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:52.081 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:52.081 -08 000000090 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:04:52.081 -08 000000102 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:04:52.081 -08 000000044 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:04:52.081 -08 000000064 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:04:52.081 -08 000000034 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:04:52.081 -08 000000102 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:04:52.081 -08 000000047 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:04:52.081 -08 000000085 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:04:52.081 -08 000000064 INF: ======================================
17-02-28 20:04:52.081 -08 000000068 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:04:52.082 -08 000000102 INF: ======================================
17-02-28 20:04:52.082 -08 000000047 INF: ======================================
17-02-28 20:04:52.082 -08 000000085 INF: ======================================
17-02-28 20:04:52.082 -08 000000034 INF: ======================================
17-02-28 20:04:52.082 -08 000000032 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:04:52.082 -08 000000032 INF: Z Motor: Moving to -0.1565 mm, started at -0.0100 mm
17-02-28 20:04:52.082 -08 000000032 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:04:52.083 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:52.084 -08 000000069 INF: ======================================
17-02-28 20:04:52.084 -08 000000090 INF: ======================================
17-02-28 20:04:52.084 -08 000000044 INF: ======================================
17-02-28 20:04:52.085 -08 000000068 INF: ======================================
17-02-28 20:04:52.085 -08 000000031 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:52.086 -08 000000070 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:52.086 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:52.086 -08 000000031 INF: ======================================
17-02-28 20:04:52.087 -08 000000070 INF: ======================================
17-02-28 20:04:52.087 -08 000000100 INF: ======================================
17-02-28 20:04:52.087 -08 000000063 INF: ======================================
17-02-28 20:04:52.090 -08 000000036 INF: FPGA: Recv ZTRG 
17-02-28 20:04:52.090 -08 000000032 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:04:52.091 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:52.152 -08 000000044 INF: FPGA: Recv ZYT 
17-02-28 20:04:52.152 -08 000000032 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:04:52.152 -08 000000032 INF: FPGA: Xmit ZMV 41032\n
17-02-28 20:04:52.153 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:04:52.153 -08 000000059 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:52.153 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:52.155 -08 000000095 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:04:52.155 -08 000000095 INF: X Motor: Xmit PR VI\n
17-02-28 20:04:52.213 -08 000000093 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:04:52.213 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:04:52.215 -08 000000095 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:04:52.215 -08 000000095 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:04:52.215 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:04:52.215 -08 000000095 INF: X Motor: Moving to 76.9121 mm @15.000 mm/sec, started at 77.4814 mm
17-02-28 20:04:52.215 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:52.215 -08 000000095 INF: X Motor: Xmit MA 7337\n
17-02-28 20:04:52.279 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:04:52.279 -08 000000059 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:52.279 -08 000000095 INF: X Motor: Recv MA 7337\r\n>
17-02-28 20:04:52.279 -08 000000059 INF: Y Motor: Set target position to 5955447 encoder counts
17-02-28 20:04:52.279 -08 000000059 INF: Y Motor: Xmit s r0xca 5955447\r
17-02-28 20:04:52.279 -08 000000095 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:04:52.338 -08 000000093 INF: FPGA: Recv ZMV 
17-02-28 20:04:52.338 -08 000000032 INF: Z Motor: MoveAndTrigger 'ZMV' command took 186.1256 ms
17-02-28 20:04:52.338 -08 000000032 INF: FPGA: Xmit ZDACR\n
17-02-28 20:04:52.340 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:04:52.340 -08 000000059 INF: Y Motor: Start the move command
17-02-28 20:04:52.340 -08 000000059 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:52.341 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:52.402 -08 000000067 INF: FPGA: Recv ZDACR 41032
17-02-28 20:04:52.402 -08 000000032 INF: Z Motor: MoveAndTrigger took 319.4833 ms w/comms
17-02-28 20:04:52.402 -08 000000032 INF: Z Motor: After move to -0.1565, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:04:52.402 -08 000000032 INF: Z Motor: MoveAbsStepped took 319.6479 ms
17-02-28 20:04:52.402 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:52.403 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:52.404 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:04:52.404 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:04:52.404 -08 000000059 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:04:52.404 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:52.404 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:04:52.405 -08 000000068 INF: ===================Camera Arm TDI===================
17-02-28 20:04:52.405 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:52.406 -08 000000068 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:52.406 -08 000000101 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:04:52.406 -08 000000068 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:52.406 -08 000000101 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:52.407 -08 000000101 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:04:52.464 -08 000000054 INF: FPGA: Recv ZSEL 
17-02-28 20:04:52.465 -08 000000101 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:52.465 -08 000000101 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:04:52.527 -08 000000067 INF: FPGA: Recv TDIBB
17-02-28 20:04:52.527 -08 000000101 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:52.528 -08 000000101 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:04:52.529 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:52.530 -08 000000059 INF: Y Motor: Unshifted Position: 5881420
17-02-28 20:04:52.530 -08 000000101 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:04:52.531 -08 000000101 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:04:52.531 -08 000000101 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:04:52.580 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:52.588 -08 000000098 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:52.588 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:52.590 -08 000000101 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:04:52.590 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:52.592 -08 000000101 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:04:52.592 -08 000000101 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:04:52.592 -08 000000101 INF: Z Motor: Arming to move to -0.1165 mm
17-02-28 20:04:52.592 -08 000000101 INF: FPGA: Xmit ZYT 6435447 4\n
17-02-28 20:04:52.650 -08 000000044 INF: FPGA: Recv ZYT 
17-02-28 20:04:52.650 -08 000000101 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6381420 enc / 63.814 mm / ) = 6435447 enc / 64.354 mm
17-02-28 20:04:52.650 -08 000000101 INF: FPGA: Xmit ZARM 30546\n
17-02-28 20:04:52.653 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:52.702 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:52.712 -08 000000083 INF: FPGA: Recv ZARM
17-02-28 20:04:52.712 -08 000000101 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9792 ms
17-02-28 20:04:52.712 -08 000000101 INF: Z Motor: ArmAbsStepped took 120.0398 ms
17-02-28 20:04:52.712 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:52.713 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:52.713 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:04:52.714 -08 000000095 INF: X Motor: Xmit PR ER\n
17-02-28 20:04:52.715 -08 000000101 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:04:52.715 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:04:52.717 -08 000000101 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:04:52.717 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:04:52.718 -08 000000101 INF: ======================================
17-02-28 20:04:52.776 -08 000000095 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:04:52.776 -08 000000095 INF: X Motor: Moved to 76.9126 after 497 ms
17-02-28 20:04:52.776 -08 000000095 INF: ======================================
17-02-28 20:04:52.840 -08 000000059 INF: Y Motor: Unshifted Position: 5955448
17-02-28 20:04:52.840 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:52.840 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:52.902 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:04:52.902 -08 000000059 INF: Y Motor: Moved to 64.5545 after 498 ms
17-02-28 20:04:52.902 -08 000000059 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:52.963 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:52.964 -08 000000059 INF: Y Motor: Recv v 4096\r
17-02-28 20:04:52.964 -08 000000059 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:52.964 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:53.027 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:53.028 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:04:53.028 -08 000000059 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:53.028 -08 000000059 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:53.090 -08 000000059 INF: Y Motor: Recv v 402653184\r
17-02-28 20:04:53.090 -08 000000059 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:04:53.090 -08 000000059 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:53.090 -08 000000059 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:53.152 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:04:53.152 -08 000000059 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:53.152 -08 000000059 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:53.152 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:53.214 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:04:53.214 -08 000000059 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:53.214 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:53.276 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:04:53.276 -08 000000059 INF: ======================================
17-02-28 20:04:53.277 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:53.277 -08 000000092 INF: ===================Move X,Y===================
17-02-28 20:04:53.278 -08 000000092 INF: ======================================
17-02-28 20:04:53.337 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:53.373 -08 000000068 INF: Camera #0 AttachBuffer (imageDataPtr = 56909434928 imgPtr = 56909434928 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:04:53.373 -08 000000068 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:04:53.373 -08 000000068 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:53.388 -08 000000068 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:53.390 -08 000000068 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:53.587 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:53.651 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:53.901 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:53.963 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:54.213 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:54.274 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:54.399 -08 000000068 INF: Camera #2 AttachBuffer (imageDataPtr = 58721374256 imgPtr = 59627343920 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:04:54.399 -08 000000068 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:04:54.400 -08 000000068 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:54.416 -08 000000068 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:54.418 -08 000000068 INF: ===================Camera Arm TDI===================
17-02-28 20:04:54.419 -08 000000068 INF: ======================================
17-02-28 20:04:54.420 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:54.421 -08 000000032 INF: ======================================
17-02-28 20:04:54.422 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:54.423 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:54.423 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:04:54.423 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:04:54.462 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:54.462 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:04:54.522 -08 000000092 INF: FPGA: Recv ZFREQCL
17-02-28 20:04:54.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:04:54.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:54.523 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:54.524 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:54.586 -08 000000038 INF: FPGA: Recv TDIYERD 6455448
17-02-28 20:04:54.586 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455448 counts (64.554 mm)
17-02-28 20:04:54.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:54.587 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:54.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:54.587 -08 000000004 INF: ===================TDI FPGA Arm===================
17-02-28 20:04:54.587 -08 000000044 INF: ===================Set YMotor gains for scans===================
17-02-28 20:04:54.588 -08 000000044 INF: ======================================
17-02-28 20:04:54.588 -08 000000004 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:54.589 -08 000000004 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:04:54.589 -08 000000004 INF: FPGA: Xmit TDIYPOS 6344522\n
17-02-28 20:04:54.648 -08 000000102 INF: FPGA: Recv TDIYPOS
17-02-28 20:04:54.648 -08 000000004 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:54.649 -08 000000004 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:04:54.650 -08 000000004 INF: FPGA: Xmit TDIYARM3 139264 6435447 1 1\n
17-02-28 20:04:54.710 -08 000000101 INF: FPGA: Recv TDIYARM3
17-02-28 20:04:54.710 -08 000000004 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:54.711 -08 000000004 INF: ===================TDI FPGA Arm===================
17-02-28 20:04:54.712 -08 000000004 INF: ======================================
17-02-28 20:04:54.713 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:54.714 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:54.714 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:54.714 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:54.715 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:54.716 -08 000000032 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:04:54.716 -08 000000067 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:04:54.716 -08 000000032 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:04:54.716 -08 000000032 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:04:54.716 -08 000000032 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:04:54.716 -08 000000067 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:04:54.716 -08 000000032 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:04:54.716 -08 000000067 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:04:54.716 -08 000000067 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:04:54.717 -08 000000067 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:04:54.837 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:54.897 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:55.146 -08 000000085 INF: FPGA: Recv EX2MV
17-02-28 20:04:55.146 -08 000000085 INF: FPGA: Recv EX1MV
17-02-28 20:04:55.146 -08 000000067 INF: Excitation Filter 1: Moved -107 steps in 429.7348 ms
17-02-28 20:04:55.146 -08 000000067 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 429.8565 ms
17-02-28 20:04:55.146 -08 000000067 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 429.9341 ms
17-02-28 20:04:55.146 -08 000000032 INF: Excitation Filter 2: Moved -107 steps in 429.9504 ms
17-02-28 20:04:55.146 -08 000000032 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 430.1451 ms
17-02-28 20:04:55.146 -08 000000032 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 430.2108 ms
17-02-28 20:04:55.146 -08 000000067 INF: ======================================
17-02-28 20:04:55.146 -08 000000032 INF: ======================================
17-02-28 20:04:55.147 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:55.147 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:55.148 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:55.149 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:04:55.149 -08 000000083 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:55.149 -08 000000030 INF: ===================FPGA Z Wait===================
17-02-28 20:04:55.149 -08 000000064 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:55.150 -08 000000064 INF: Y Motor: Moving to 14.9061 mm @6.500 mm/sec, started at 64.5545 mm
17-02-28 20:04:55.150 -08 000000064 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:55.150 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:55.150 -08 000000030 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:04:55.150 -08 000000077 INF: ===================Camera TDI, Parallel===================
17-02-28 20:04:55.150 -08 000000083 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:04:55.151 -08 000000083 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:04:55.151 -08 000000004 INF: ===================Camera TDI===================
17-02-28 20:04:55.151 -08 000000031 INF: ===================Camera TDI===================
17-02-28 20:04:55.152 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:55.152 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:55.153 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:55.153 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:55.211 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:55.211 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:55.211 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:55.211 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:04:55.212 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:04:55.212 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 5 of 5 seconds left===================
17-02-28 20:04:55.212 -08 000000064 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:55.212 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:55.274 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:04:55.274 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:55.302 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:55.302 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:55.303 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:55.303 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:55.334 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:04:55.334 -08 000000064 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:55.334 -08 000000064 INF: Y Motor: Set target position to 990613 encoder counts
17-02-28 20:04:55.334 -08 000000064 INF: Y Motor: Xmit s r0xca 990613\r
17-02-28 20:04:55.399 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:04:55.399 -08 000000064 INF: Y Motor: Start the move command
17-02-28 20:04:55.399 -08 000000064 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:55.452 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:55.452 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:55.453 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:55.453 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:55.461 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:04:55.461 -08 000000064 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:04:55.461 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:55.521 -08 000000090 INF: FPGA: Recv ZWAIT 
17-02-28 20:04:55.521 -08 000000030 INF: ======================================
17-02-28 20:04:55.585 -08 000000064 INF: Y Motor: Unshifted Position: 5893809
17-02-28 20:04:55.602 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:04:55.602 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:04:55.602 -08 000000004 INF: ===================Camera #0 Frame #4===================
17-02-28 20:04:55.603 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:04:55.603 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:04:55.603 -08 000000031 INF: ===================Camera #2 Frame #4===================
17-02-28 20:04:55.635 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:55.759 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:55.764 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:04:55.764 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:04:55.764 -08 000000004 INF: ===================Camera #0 Frame #10===================
17-02-28 20:04:55.766 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:04:55.766 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:04:55.766 -08 000000031 INF: ===================Camera #2 Frame #10===================
17-02-28 20:04:55.898 -08 000000064 INF: Y Motor: Unshifted Position: 5690147
17-02-28 20:04:55.932 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:04:55.932 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:04:55.932 -08 000000004 INF: ===================Camera #0 Frame #17===================
17-02-28 20:04:55.935 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:04:55.935 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:04:55.935 -08 000000031 INF: ===================Camera #2 Frame #17===================
17-02-28 20:04:55.948 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.053 -08 000000037 INF: RunCopyService queue size at 2/28/2017 8:04:56 PM is 2
17-02-28 20:04:56.072 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.103 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:56.103 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:56.103 -08 000000004 INF: ===================Camera #0 Frame #23===================
17-02-28 20:04:56.107 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:56.107 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:56.107 -08 000000031 INF: ===================Camera #2 Frame #23===================
17-02-28 20:04:56.211 -08 000000064 INF: Y Motor: Unshifted Position: 5487137
17-02-28 20:04:56.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:56.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 4 of 5 seconds left===================
17-02-28 20:04:56.261 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.272 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:04:56.272 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:04:56.272 -08 000000004 INF: ===================Camera #0 Frame #29===================
17-02-28 20:04:56.277 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:04:56.277 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:04:56.277 -08 000000031 INF: ===================Camera #2 Frame #29===================
17-02-28 20:04:56.385 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.440 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:04:56.440 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:04:56.440 -08 000000004 INF: ===================Camera #0 Frame #35===================
17-02-28 20:04:56.446 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:04:56.446 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:04:56.446 -08 000000031 INF: ===================Camera #2 Frame #35===================
17-02-28 20:04:56.523 -08 000000064 INF: Y Motor: Unshifted Position: 5284330
17-02-28 20:04:56.573 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.608 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41.
17-02-28 20:04:56.608 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41
17-02-28 20:04:56.608 -08 000000004 INF: ===================Camera #0 Frame #41===================
17-02-28 20:04:56.615 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:04:56.615 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:04:56.615 -08 000000031 INF: ===================Camera #2 Frame #42===================
17-02-28 20:04:56.697 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.776 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:04:56.776 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:04:56.776 -08 000000004 INF: ===================Camera #0 Frame #48===================
17-02-28 20:04:56.788 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:04:56.788 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:04:56.788 -08 000000031 INF: ===================Camera #2 Frame #48===================
17-02-28 20:04:56.835 -08 000000064 INF: Y Motor: Unshifted Position: 5082606
17-02-28 20:04:56.885 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.948 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:04:56.948 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:04:56.948 -08 000000004 INF: ===================Camera #0 Frame #54===================
17-02-28 20:04:56.958 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:04:56.958 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:04:56.958 -08 000000031 INF: ===================Camera #2 Frame #54===================
17-02-28 20:04:57.010 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.117 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:04:57.117 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:04:57.117 -08 000000004 INF: ===================Camera #0 Frame #60===================
17-02-28 20:04:57.128 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:04:57.128 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:04:57.128 -08 000000031 INF: ===================Camera #2 Frame #61===================
17-02-28 20:04:57.146 -08 000000064 INF: Y Motor: Unshifted Position: 4879157
17-02-28 20:04:57.196 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:57.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 3 of 5 seconds left===================
17-02-28 20:04:57.286 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-02-28 20:04:57.286 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-02-28 20:04:57.286 -08 000000004 INF: ===================Camera #0 Frame #66===================
17-02-28 20:04:57.301 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:04:57.301 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:04:57.301 -08 000000031 INF: ===================Camera #2 Frame #67===================
17-02-28 20:04:57.320 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.455 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:04:57.455 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:04:57.455 -08 000000004 INF: ===================Camera #0 Frame #73===================
17-02-28 20:04:57.459 -08 000000064 INF: Y Motor: Unshifted Position: 4675706
17-02-28 20:04:57.471 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:04:57.471 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:04:57.471 -08 000000031 INF: ===================Camera #2 Frame #73===================
17-02-28 20:04:57.509 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.627 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:04:57.627 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:04:57.627 -08 000000004 INF: ===================Camera #0 Frame #79===================
17-02-28 20:04:57.634 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.641 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:04:57.641 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:04:57.641 -08 000000031 INF: ===================Camera #2 Frame #79===================
17-02-28 20:04:57.770 -08 000000064 INF: Y Motor: Unshifted Position: 4473983
17-02-28 20:04:57.796 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:04:57.796 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:04:57.796 -08 000000004 INF: ===================Camera #0 Frame #85===================
17-02-28 20:04:57.810 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:04:57.810 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:04:57.810 -08 000000031 INF: ===================Camera #2 Frame #86===================
17-02-28 20:04:57.820 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.946 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.965 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-02-28 20:04:57.965 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-02-28 20:04:57.965 -08 000000004 INF: ===================Camera #0 Frame #91===================
17-02-28 20:04:57.983 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:04:57.983 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:04:57.983 -08 000000031 INF: ===================Camera #2 Frame #92===================
17-02-28 20:04:58.082 -08 000000064 INF: Y Motor: Unshifted Position: 4269021
17-02-28 20:04:58.132 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:58.135 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:04:58.135 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:04:58.135 -08 000000004 INF: ===================Camera #0 Frame #98===================
17-02-28 20:04:58.153 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:04:58.153 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:04:58.153 -08 000000031 INF: ===================Camera #2 Frame #98===================
17-02-28 20:04:58.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:58.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 2 of 5 seconds left===================
17-02-28 20:04:58.256 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:58.308 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:04:58.308 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:04:58.308 -08 000000004 INF: ===================Camera #0 Frame #104===================
17-02-28 20:04:58.323 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:04:58.323 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:04:58.323 -08 000000031 INF: ===================Camera #2 Frame #105===================
17-02-28 20:04:58.393 -08 000000064 INF: Y Motor: Unshifted Position: 4068810
17-02-28 20:04:58.443 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:58.477 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:04:58.477 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:04:58.477 -08 000000004 INF: ===================Camera #0 Frame #110===================
17-02-28 20:04:58.496 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:04:58.496 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:04:58.496 -08 000000031 INF: ===================Camera #2 Frame #111===================
17-02-28 20:04:58.570 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:58.647 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:04:58.647 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:04:58.647 -08 000000004 INF: ===================Camera #0 Frame #117===================
17-02-28 20:04:58.667 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:04:58.667 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:04:58.667 -08 000000031 INF: ===================Camera #2 Frame #117===================
17-02-28 20:04:58.706 -08 000000064 INF: Y Motor: Unshifted Position: 3864499
17-02-28 20:04:58.756 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:58.820 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:04:58.820 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:04:58.820 -08 000000004 INF: ===================Camera #0 Frame #123===================
17-02-28 20:04:58.837 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:04:58.837 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:04:58.837 -08 000000031 INF: ===================Camera #2 Frame #124===================
17-02-28 20:04:58.880 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:58.990 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:04:58.990 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:04:58.990 -08 000000004 INF: ===================Camera #0 Frame #129===================
17-02-28 20:04:59.011 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:04:59.011 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:04:59.011 -08 000000031 INF: ===================Camera #2 Frame #130===================
17-02-28 20:04:59.022 -08 000000064 INF: Y Motor: Unshifted Position: 3662996
17-02-28 20:04:59.072 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:59.160 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:04:59.160 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:04:59.160 -08 000000004 INF: ===================Camera #0 Frame #135===================
17-02-28 20:04:59.180 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:04:59.180 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:04:59.180 -08 000000031 INF: ===================Camera #2 Frame #136===================
17-02-28 20:04:59.194 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:59.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:59.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 1 of 5 seconds left===================
17-02-28 20:04:59.330 -08 000000064 INF: Y Motor: Unshifted Position: 3458687
17-02-28 20:04:59.330 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:04:59.330 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:04:59.330 -08 000000004 INF: ===================Camera #0 Frame #142===================
17-02-28 20:04:59.351 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:04:59.351 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:04:59.351 -08 000000031 INF: ===================Camera #2 Frame #142===================
17-02-28 20:04:59.380 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:59.502 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:04:59.502 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:04:59.502 -08 000000004 INF: ===================Camera #0 Frame #148===================
17-02-28 20:04:59.506 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:59.522 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:04:59.522 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:04:59.522 -08 000000031 INF: ===================Camera #2 Frame #149===================
17-02-28 20:04:59.642 -08 000000064 INF: Y Motor: Unshifted Position: 3255881
17-02-28 20:04:59.672 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:04:59.672 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:04:59.672 -08 000000004 INF: ===================Camera #0 Frame #154===================
17-02-28 20:04:59.692 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:59.696 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:04:59.696 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:04:59.696 -08 000000031 INF: ===================Camera #2 Frame #155===================
17-02-28 20:04:59.816 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:59.842 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:04:59.842 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:04:59.842 -08 000000004 INF: ===================Camera #0 Frame #161===================
17-02-28 20:04:59.866 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:04:59.866 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:04:59.866 -08 000000031 INF: ===================Camera #2 Frame #161===================
17-02-28 20:04:59.956 -08 000000064 INF: Y Motor: Unshifted Position: 3054384
17-02-28 20:05:00.006 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.015 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:05:00.015 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:05:00.015 -08 000000004 INF: ===================Camera #0 Frame #167===================
17-02-28 20:05:00.037 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:05:00.037 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:05:00.037 -08 000000031 INF: ===================Camera #2 Frame #168===================
17-02-28 20:05:00.130 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.185 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:05:00.185 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:05:00.185 -08 000000004 INF: ===================Camera #0 Frame #173===================
17-02-28 20:05:00.211 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:05:00.211 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:05:00.211 -08 000000031 INF: ===================Camera #2 Frame #174===================
17-02-28 20:05:00.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:05:00.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:05:00.213 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:05:00.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:05:00.266 -08 000000064 INF: Y Motor: Unshifted Position: 2850075
17-02-28 20:05:00.312 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:00.316 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.355 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:05:00.355 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:05:00.355 -08 000000004 INF: ===================Camera #0 Frame #179===================
17-02-28 20:05:00.381 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:05:00.381 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:05:00.381 -08 000000031 INF: ===================Camera #2 Frame #180===================
17-02-28 20:05:00.389 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF)
17-02-28 20:05:00.389 -08 000000018 INF: Current Position of Pump is: 15360
17-02-28 20:05:00.440 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.489 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:00.525 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:05:00.525 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:05:00.525 -08 000000004 INF: ===================Camera #0 Frame #186===================
17-02-28 20:05:00.551 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:05:00.551 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:05:00.551 -08 000000031 INF: ===================Camera #2 Frame #187===================
17-02-28 20:05:00.579 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF)
17-02-28 20:05:00.579 -08 000000018 INF: Current Position of Pump is: 15360
17-02-28 20:05:00.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Dispensing port PortC===================
17-02-28 20:05:00.580 -08 000000064 INF: Y Motor: Unshifted Position: 2648358
17-02-28 20:05:00.630 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.679 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD15360R\r
17-02-28 20:05:00.698 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:05:00.698 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:05:00.698 -08 000000004 INF: ===================Camera #0 Frame #192===================
17-02-28 20:05:00.725 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:05:00.725 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:05:00.725 -08 000000031 INF: ===================Camera #2 Frame #193===================
17-02-28 20:05:00.754 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.765 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:00.865 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:00.868 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:05:00.868 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:05:00.868 -08 000000004 INF: ===================Camera #0 Frame #198===================
17-02-28 20:05:00.890 -08 000000064 INF: Y Motor: Unshifted Position: 2444267
17-02-28 20:05:00.896 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:05:00.896 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:05:00.896 -08 000000031 INF: ===================Camera #2 Frame #199===================
17-02-28 20:05:00.940 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.951 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:01.038 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:05:01.038 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:05:01.038 -08 000000004 INF: ===================Camera #0 Frame #205===================
17-02-28 20:05:01.064 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:01.067 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:05:01.067 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:05:01.067 -08 000000031 INF: ===================Camera #2 Frame #206===================
17-02-28 20:05:01.201 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:01.201 -08 000000064 INF: Y Motor: Unshifted Position: 2241896
17-02-28 20:05:01.211 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:05:01.211 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:05:01.211 -08 000000004 INF: ===================Camera #0 Frame #211===================
17-02-28 20:05:01.241 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:05:01.241 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:05:01.241 -08 000000031 INF: ===================Camera #2 Frame #212===================
17-02-28 20:05:01.251 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:01.262 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:01.378 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:01.379 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:05:01.379 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:05:01.379 -08 000000004 INF: ===================Camera #0 Frame #217===================
17-02-28 20:05:01.412 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:05:01.412 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:05:01.412 -08 000000031 INF: ===================Camera #2 Frame #218===================
17-02-28 20:05:01.512 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:01.516 -08 000000064 INF: Y Motor: Unshifted Position: 2039531
17-02-28 20:05:01.549 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:05:01.549 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:05:01.549 -08 000000004 INF: ===================Camera #0 Frame #223===================
17-02-28 20:05:01.566 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:01.574 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:01.583 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:05:01.583 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:05:01.583 -08 000000031 INF: ===================Camera #2 Frame #225===================
17-02-28 20:05:01.691 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:01.719 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:05:01.719 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:05:01.719 -08 000000004 INF: ===================Camera #0 Frame #230===================
17-02-28 20:05:01.757 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:05:01.757 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:05:01.757 -08 000000031 INF: ===================Camera #2 Frame #231===================
17-02-28 20:05:01.824 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:01.828 -08 000000064 INF: Y Motor: Unshifted Position: 1835427
17-02-28 20:05:01.878 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:01.887 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:01.892 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:05:01.892 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:05:01.892 -08 000000004 INF: ===================Camera #0 Frame #236===================
17-02-28 20:05:01.928 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:05:01.928 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:05:01.928 -08 000000031 INF: ===================Camera #2 Frame #237===================
17-02-28 20:05:02.001 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:02.062 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:05:02.062 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:05:02.062 -08 000000004 INF: ===================Camera #0 Frame #242===================
17-02-28 20:05:02.099 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:05:02.099 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:05:02.099 -08 000000031 INF: ===================Camera #2 Frame #244===================
17-02-28 20:05:02.137 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:02.140 -08 000000064 INF: Y Motor: Unshifted Position: 1633924
17-02-28 20:05:02.190 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:02.198 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:02.232 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:05:02.232 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:05:02.232 -08 000000004 INF: ===================Camera #0 Frame #249===================
17-02-28 20:05:02.273 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:05:02.273 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:05:02.273 -08 000000031 INF: ===================Camera #2 Frame #250===================
17-02-28 20:05:02.311 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:02.405 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:05:02.405 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:05:02.405 -08 000000004 INF: ===================Camera #0 Frame #255===================
17-02-28 20:05:02.444 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:05:02.444 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:05:02.444 -08 000000031 INF: ===================Camera #2 Frame #256===================
17-02-28 20:05:02.448 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:02.449 -08 000000064 INF: Y Motor: Unshifted Position: 1429603
17-02-28 20:05:02.499 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:02.510 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:02.575 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:05:02.575 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:05:02.575 -08 000000004 INF: ===================Camera #0 Frame #261===================
17-02-28 20:05:02.614 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:05:02.614 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:05:02.614 -08 000000031 INF: ===================Camera #2 Frame #263===================
17-02-28 20:05:02.623 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:02.745 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:05:02.745 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:05:02.745 -08 000000004 INF: ===================Camera #0 Frame #267===================
17-02-28 20:05:02.760 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:02.762 -08 000000064 INF: Y Motor: Unshifted Position: 1226791
17-02-28 20:05:02.788 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:05:02.788 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:05:02.788 -08 000000031 INF: ===================Camera #2 Frame #269===================
17-02-28 20:05:02.812 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:02.823 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:02.884 -08 000000100 INF: FPGA: Recv TDIYWAIT
17-02-28 20:05:02.884 -08 000000083 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:02.886 -08 000000083 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:05:02.886 -08 000000073 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:05:02.887 -08 000000101 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:05:02.887 -08 000000073 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:05:02.887 -08 000000073 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:05:02.887 -08 000000073 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:05:02.887 -08 000000073 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:05:02.887 -08 000000101 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:05:02.887 -08 000000101 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:05:02.887 -08 000000101 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:05:02.888 -08 000000101 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:05:02.915 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:02.915 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:02.915 -08 000000004 INF: ===================Camera #0 Frame #272===================
17-02-28 20:05:02.932 -08 000000004 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:02.933 -08 000000004 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:02.936 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:03.073 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:03.076 -08 000000064 INF: Y Motor: Unshifted Position: 1023781
17-02-28 20:05:03.096 -08 000000004 INF: Camera #0 ReleaseBuffer
17-02-28 20:05:03.096 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:03.096 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:03.096 -08 000000031 INF: ===================Camera #2 Frame #272===================
17-02-28 20:05:03.096 -08 000000004 INF: ===================Camera TDI===================
17-02-28 20:05:03.105 -08 000000031 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:03.106 -08 000000031 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:03.126 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:03.126 -08 000000004 INF: ======================================
17-02-28 20:05:03.136 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:03.136 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:05:03.136 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:05:03.261 -08 000000033 INF: FPGA: Recv EX1MV
17-02-28 20:05:03.261 -08 000000033 INF: FPGA: Recv EX2MV
17-02-28 20:05:03.261 -08 000000073 INF: Excitation Filter 1: Moved 107 steps in 374.0059 ms
17-02-28 20:05:03.261 -08 000000101 INF: Excitation Filter 2: Moved 107 steps in 373.7485 ms
17-02-28 20:05:03.261 -08 000000073 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 374.1169 ms
17-02-28 20:05:03.261 -08 000000101 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.8899 ms
17-02-28 20:05:03.261 -08 000000101 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 374.0538 ms
17-02-28 20:05:03.261 -08 000000073 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 374.245 ms
17-02-28 20:05:03.261 -08 000000101 INF: ======================================
17-02-28 20:05:03.262 -08 000000073 INF: ======================================
17-02-28 20:05:03.262 -08 000000064 INF: Y Motor: Unshifted Position: 990613
17-02-28 20:05:03.262 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:03.262 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:03.263 -08 000000083 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:03.264 -08 000000083 INF: ======================================
17-02-28 20:05:03.306 -08 000000031 INF: Camera #2 ReleaseBuffer
17-02-28 20:05:03.306 -08 000000031 INF: ===================Camera TDI===================
17-02-28 20:05:03.324 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:05:03.324 -08 000000064 INF: Y Motor: Moved to 14.9061 after 7862 ms
17-02-28 20:05:03.324 -08 000000064 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:03.340 -08 000000031 INF: ======================================
17-02-28 20:05:03.341 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:05:03.343 -08 000000077 INF: ======================================
17-02-28 20:05:03.386 -08 000000064 INF: Y Motor: Recv v 4097\r
17-02-28 20:05:03.386 -08 000000064 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:03.386 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:03.447 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:05:03.447 -08 000000064 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:03.447 -08 000000064 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:03.509 -08 000000064 INF: Y Motor: Recv v 134217728\r
17-02-28 20:05:03.509 -08 000000064 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:05:03.509 -08 000000064 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:03.509 -08 000000064 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:03.575 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:05:03.575 -08 000000064 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:03.575 -08 000000064 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:03.575 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:03.636 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:05:03.636 -08 000000064 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:03.636 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:03.698 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:05:03.698 -08 000000064 INF: ======================================
17-02-28 20:05:03.699 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:03.700 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:03.701 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:03.701 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:05:03.758 -08 000000034 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:05:03.758 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:03.820 -08 000000033 INF: FPGA: Recv TDIYERD 1490614
17-02-28 20:05:03.820 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:05:03.882 -08 000000044 INF: FPGA: Recv ZADCR 35409
17-02-28 20:05:03.882 -08 000000042 INF: At scan end Y pos = 14.906 and Z pos = -0.135. Y moved -48.539 mm
17-02-28 20:05:03.882 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:05:03.944 -08 000000102 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:05:03.944 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:05:03.944 -08 000000042 INF: TDIScan finished after 11888.793 ms
17-02-28 20:05:03.944 -08 000000042 INF: Image[0]: Y should trigger at 63.445 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:05:03.944 -08 000000042 INF: Image[2]: Y should trigger at 63.445 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:05:03.946 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:03.981 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.555 um
17-02-28 20:05:03.981 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:03.982 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:05:04.010 -08 000000059 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:05:04.010 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.011 -08 000000064 INF: ===================Dither Clean Up Command===================
17-02-28 20:05:04.011 -08 000000067 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:05:04.011 -08 000000065 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:05:04.011 -08 000000100 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:05:04.012 -08 000000067 INF: ======================================
17-02-28 20:05:04.012 -08 000000100 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:05:04.012 -08 000000100 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:05:04.012 -08 000000065 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:04.012 -08 000000065 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:04.012 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:04.012 -08 000000078 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:05:04.012 -08 000000078 INF: ======================================
17-02-28 20:05:04.013 -08 000000090 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:05:04.069 -08 000000036 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:04.069 -08 000000036 INF: FPGA: Recv ZSEL 
17-02-28 20:05:04.069 -08 000000090 INF: FPGA: Xmit ZDACW 41032\n
17-02-28 20:05:04.069 -08 000000100 INF: ======================================
17-02-28 20:05:04.071 -08 000000065 INF: Y Motor: Recv ok\r
17-02-28 20:05:04.071 -08 000000065 INF: ======================================
17-02-28 20:05:04.131 -08 000000059 INF: FPGA: Recv ZDACW 
17-02-28 20:05:04.132 -08 000000090 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:05:04.132 -08 000000090 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:05:04.196 -08 000000077 INF: FPGA: Recv TDIBB
17-02-28 20:05:04.196 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:04.197 -08 000000090 INF: ======================================
17-02-28 20:05:04.198 -08 000000064 INF: ======================================
17-02-28 20:05:04.199 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:05:04.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:05:04.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:05:04.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:05:04.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:05:04.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:05:04.202 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Waiting for image analysis===================
17-02-28 20:05:04.202 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:05:04.202 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:05:04.203 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:05:04.225 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:05:04.226 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:05:04.226 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:05:04.226 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.226 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:05:04.226 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:05:04.227 -08 000000042 INF: Transformed XStagePosition from 78.03464 mm to 78.0101424511522 mm.
17-02-28 20:05:04.238 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5537793554841 mm.
17-02-28 20:05:04.238 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3537793554841 mm.
17-02-28 20:05:04.238 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4445293554841 mm.
17-02-28 20:05:04.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:05:04.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.241 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -156.5 um, section = D_1
17-02-28 20:05:04.259 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:05:04.268 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1103 Request: {"Cycle":2,"Lane":4,"Tile":1103,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF231","HCSMMF192","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.308 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:04.309 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:04.312 -08 000000054 INF: ===================MoveEmissionFilters===================
17-02-28 20:05:04.312 -08 000000065 INF: ===================Move X,Y===================
17-02-28 20:05:04.313 -08 000000065 INF: ===================Move X,Y, Parallel===================
17-02-28 20:05:04.314 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:04.315 -08 000000083 INF: ===================Move X Motor without settling===================
17-02-28 20:05:04.315 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:05:04.315 -08 000000083 INF: X Motor: Xmit PR VM\n
17-02-28 20:05:04.315 -08 000000068 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:05:04.315 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:04.317 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:05:04.318 -08 000000084 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:04.318 -08 000000084 INF: Y Motor: Moving to 64.5538 mm @25.000 mm/sec, started at 14.9061 mm
17-02-28 20:05:04.319 -08 000000084 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:04.319 -08 000000084 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:04.321 -08 000000062 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:04.321 -08 000000101 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:04.321 -08 000000097 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:04.322 -08 000000062 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:04.322 -08 000000101 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:04.322 -08 000000097 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:04.323 -08 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:04.324 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:05:04.324 -08 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:04.324 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:04.325 -08 000000039 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:05:04.325 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:04.325 -08 000000039 INF: ======================================
17-02-28 20:05:04.325 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:05:04.325 -08 000000067 INF: ===================Camera Arm TDI===================
17-02-28 20:05:04.326 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:04.326 -08 000000090 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:05:04.326 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:04.327 -08 000000039 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:05:04.327 -08 000000067 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:04.327 -08 000000039 INF: ======================================
17-02-28 20:05:04.329 -08 000000039 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:05:04.330 -08 000000039 INF: ======================================
17-02-28 20:05:04.330 -08 000000025 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:05:04.331 -08 000000099 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:05:04.331 -08 000000025 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:05:04.331 -08 000000044 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:05:04.331 -08 000000077 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:05:04.332 -08 000000099 INF: ======================================
17-02-28 20:05:04.332 -08 000000044 INF: ======================================
17-02-28 20:05:04.332 -08 000000077 INF: ======================================
17-02-28 20:05:04.333 -08 000000025 INF: ======================================
17-02-28 20:05:04.335 -08 000000062 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:04.336 -08 000000062 INF: ======================================
17-02-28 20:05:04.351 -08 000000101 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:04.353 -08 000000101 INF: ======================================
17-02-28 20:05:04.357 -08 000000097 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:04.359 -08 000000097 INF: ======================================
17-02-28 20:05:04.363 -08 000000080 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:05:04.363 -08 000000080 INF: ======================================
17-02-28 20:05:04.366 -08 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:04.369 -08 000000033 INF: ======================================
17-02-28 20:05:04.372 -08 000000054 INF: ======================================
17-02-28 20:05:04.391 -08 000000025 INF: FPGA: Recv ZSEL 
17-02-28 20:05:04.392 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:04.393 -08 000000090 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:05:04.393 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:05:04.393 -08 000000083 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:05:04.393 -08 000000084 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:04.393 -08 000000083 INF: X Motor: Xmit PR VI\n
17-02-28 20:05:04.393 -08 000000084 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:04.416 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1105 Request: {"Cycle":2,"Lane":4,"Tile":1105,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF176","HCSMMF215","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.417 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1106 Request: {"Cycle":2,"Lane":4,"Tile":1106,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF185","HCSMMF191","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.424 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1108 Request: {"Cycle":2,"Lane":4,"Tile":1108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF276","HCSMMF218","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.425 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:04.427 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1110 Request: {"Cycle":2,"Lane":4,"Tile":1110,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF202","HCSMMF242","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.428 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1107 Request: {"Cycle":2,"Lane":4,"Tile":1107,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF239","HCSMMF229","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.428 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1104 Request: {"Cycle":2,"Lane":4,"Tile":1104,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF283","HCSMMF277","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.430 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1109 Request: {"Cycle":2,"Lane":4,"Tile":1109,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF211","HCSMMF274","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.430 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1113 Request: {"Cycle":2,"Lane":4,"Tile":1113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF187","HCSMMF267","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.431 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1115 Request: {"Cycle":2,"Lane":4,"Tile":1115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF273","HCSMMF263","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.432 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1111 Request: {"Cycle":2,"Lane":4,"Tile":1111,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF183","HCSMMF195","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.432 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1112 Request: {"Cycle":2,"Lane":4,"Tile":1112,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF271","HCSMMF244","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.433 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1101 Request: {"Cycle":2,"Lane":4,"Tile":1101,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF201","HCSMMF249","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.435 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1114 Request: {"Cycle":2,"Lane":4,"Tile":1114,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF230","HCSMMF213","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.435 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1119 Request: {"Cycle":2,"Lane":4,"Tile":1119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF197","HCSMMF280","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.436 -08 000000004 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1116 Request: {"Cycle":2,"Lane":4,"Tile":1116,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF247","HCSMMF219","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.437 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1102 Request: {"Cycle":2,"Lane":4,"Tile":1102,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF265","HCSMMF264","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.437 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1118 Request: {"Cycle":2,"Lane":4,"Tile":1118,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF286","HCSMMF233","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.438 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1117 Request: {"Cycle":2,"Lane":4,"Tile":1117,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF193","HCSMMF278","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.439 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1122 Request: {"Cycle":2,"Lane":4,"Tile":1122,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF240","HCSMMF181","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.440 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1125 Request: {"Cycle":2,"Lane":4,"Tile":1125,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF214","HCSMMF226","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.441 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1124 Request: {"Cycle":2,"Lane":4,"Tile":1124,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF227","HCSMMF256","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.442 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1120 Request: {"Cycle":2,"Lane":4,"Tile":1120,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF287","HCSMMF238","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.444 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1126 Request: {"Cycle":2,"Lane":4,"Tile":1126,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF224","HCSMMF261","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.444 -08 000000064 INF: FPGA: Recv TDIBB
17-02-28 20:05:04.444 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:04.445 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1121 Request: {"Cycle":2,"Lane":4,"Tile":1121,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF237","HCSMMF184","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.446 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:05:04.446 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1123 Request: {"Cycle":2,"Lane":4,"Tile":1123,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF180","HCSMMF262","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.446 -08 000000083 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:05:04.446 -08 000000084 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:04.446 -08 000000083 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:05:04.446 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:05:04.446 -08 000000083 INF: X Motor: Moving to 78.0101 mm @15.000 mm/sec, started at 76.9126 mm
17-02-28 20:05:04.446 -08 000000083 INF: X Motor: Xmit MA 7787\n
17-02-28 20:05:04.446 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:04.448 -08 000000090 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:05:04.448 -08 000000090 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:05:04.448 -08 000000090 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:05:04.448 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1128 Request: {"Cycle":2,"Lane":4,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF212","HCSMMF182","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.449 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1127 Request: {"Cycle":2,"Lane":4,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF248","HCSMMF266","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.451 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.457 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:05:04.507 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:04.507 -08 000000038 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:04.507 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:04.508 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:05:04.508 -08 000000083 INF: X Motor: Recv MA 7787\r\n>
17-02-28 20:05:04.508 -08 000000084 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:04.508 -08 000000083 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:05:04.508 -08 000000084 INF: Y Motor: Set target position to 5955378 encoder counts
17-02-28 20:05:04.508 -08 000000084 INF: Y Motor: Xmit s r0xca 5955378\r
17-02-28 20:05:04.509 -08 000000090 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:05:04.509 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:04.511 -08 000000090 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:05:04.511 -08 000000090 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:05:04.511 -08 000000090 INF: Z Motor: Arming to move to -0.1165 mm
17-02-28 20:05:04.511 -08 000000090 INF: FPGA: Xmit ZYT 6435378 4\n
17-02-28 20:05:04.544 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.544 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:05:04.568 -08 000000092 INF: FPGA: Recv ZYT 
17-02-28 20:05:04.568 -08 000000090 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490613 enc / 14.906 mm / ) = 6435378 enc / 64.354 mm
17-02-28 20:05:04.568 -08 000000090 INF: FPGA: Xmit ZARM 30546\n
17-02-28 20:05:04.570 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:05:04.570 -08 000000084 INF: Y Motor: Start the move command
17-02-28 20:05:04.570 -08 000000084 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:04.581 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.587 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:05:04.634 -08 000000004 INF: FPGA: Recv ZARM
17-02-28 20:05:04.634 -08 000000090 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.9489 ms
17-02-28 20:05:04.634 -08 000000090 INF: Z Motor: ArmAbsStepped took 122.9894 ms
17-02-28 20:05:04.634 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:04.636 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:05:04.636 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:05:04.636 -08 000000084 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:05:04.636 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:04.637 -08 000000090 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:05:04.638 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:05:04.639 -08 000000090 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:05:04.639 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:05:04.641 -08 000000090 INF: ======================================
17-02-28 20:05:04.692 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.697 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:05:04.757 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:04.757 -08 000000084 INF: Y Motor: Unshifted Position: 1076842
17-02-28 20:05:04.795 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.800 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:05:04.807 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:04.821 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:04.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:04.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-02-28 20:05:04.894 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.921 -08 000000067 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:05:04.921 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:05:04.921 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:04.934 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:04.936 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:04.938 -08 000000067 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:05.071 -08 000000084 INF: Y Motor: Unshifted Position: 1801418
17-02-28 20:05:05.121 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:05.132 -08 000000083 INF: X Motor: Xmit PR ER\n
17-02-28 20:05:05.180 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:05:05.193 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:05.193 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:05.194 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:05.195 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:05.196 -08 000000083 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:05:05.196 -08 000000083 INF: X Motor: Moved to 78.0112 after 688 ms
17-02-28 20:05:05.196 -08 000000083 INF: ======================================
17-02-28 20:05:05.246 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:05.259 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:05.259 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB2 (8)===================
17-02-28 20:05:05.259 -08 000000018 INF: Valve A1: Go to position 8
17-02-28 20:05:05.259 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:05:05.318 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 4\r
17-02-28 20:05:05.318 -08 000000018 INF: Valve A1: 22.758 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:05:05.318 -08 000000018 INF: Valve A1: Taking longest path 'CC' from 4 to 8 to avoid 7
17-02-28 20:05:05.318 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC8\r
17-02-28 20:05:05.318 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:05:05.318 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:05:05.383 -08 000000084 INF: Y Motor: Unshifted Position: 2560631
17-02-28 20:05:05.433 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:05.536 -08 000000067 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:05:05.536 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:05:05.536 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:05.552 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:05.554 -08 000000067 INF: ===================Camera Arm TDI===================
17-02-28 20:05:05.556 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:05.556 -08 000000067 INF: ======================================
17-02-28 20:05:05.558 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:05.559 -08 000000068 INF: ======================================
17-02-28 20:05:05.693 -08 000000084 INF: Y Motor: Unshifted Position: 3340573
17-02-28 20:05:05.743 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:05.870 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.005 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 8\r
17-02-28 20:05:06.005 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:06.005 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-02-28 20:05:06.006 -08 000000084 INF: Y Motor: Unshifted Position: 4123978
17-02-28 20:05:06.056 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.182 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.320 -08 000000084 INF: Y Motor: Unshifted Position: 4906434
17-02-28 20:05:06.370 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.494 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.631 -08 000000084 INF: Y Motor: Unshifted Position: 5699137
17-02-28 20:05:06.681 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.689 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:06.689 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:06.690 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:06.755 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:06.763 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:05:06.805 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.855 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:06.943 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:05:06.943 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:05:06.944 -08 000000084 INF: Y Motor: Unshifted Position: 5955380
17-02-28 20:05:06.944 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:06.944 -08 000000084 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:07.006 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:05:07.006 -08 000000084 INF: Y Motor: Moved to 64.5538 after 2369 ms
17-02-28 20:05:07.006 -08 000000084 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:07.043 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:05:07.068 -08 000000084 INF: Y Motor: Recv v 4096\r
17-02-28 20:05:07.068 -08 000000084 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:07.068 -08 000000084 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:07.129 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:07.130 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:05:07.130 -08 000000084 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:07.130 -08 000000084 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:07.192 -08 000000084 INF: Y Motor: Recv v 402653184\r
17-02-28 20:05:07.192 -08 000000084 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:05:07.192 -08 000000084 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:07.192 -08 000000084 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:07.229 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:07.254 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:05:07.254 -08 000000084 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:07.254 -08 000000084 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:07.254 -08 000000084 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:07.318 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:07.319 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:05:07.319 -08 000000084 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:07.319 -08 000000084 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:07.381 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:05:07.381 -08 000000084 INF: ======================================
17-02-28 20:05:07.382 -08 000000065 INF: ===================Move X,Y===================
17-02-28 20:05:07.383 -08 000000065 INF: ======================================
17-02-28 20:05:07.384 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:07.385 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:07.385 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:05:07.385 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:05:07.443 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:07.443 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:05:07.502 -08 000000095 INF: FPGA: Recv ZFREQCL
17-02-28 20:05:07.502 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:05:07.503 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:07.503 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:07.564 -08 000000047 INF: FPGA: Recv TDIYERD 6455380
17-02-28 20:05:07.564 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455380 counts (64.554 mm)
17-02-28 20:05:07.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:07.565 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:07.566 -08 000000068 INF: ===================TDI FPGA Arm===================
17-02-28 20:05:07.566 -08 000000057 INF: ===================Set YMotor gains for scans===================
17-02-28 20:05:07.566 -08 000000057 INF: ======================================
17-02-28 20:05:07.566 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:07.567 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:05:07.567 -08 000000068 INF: FPGA: Xmit TDIYPOS 6344453\n
17-02-28 20:05:07.568 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:07.629 -08 000000065 INF: FPGA: Recv TDIYPOS
17-02-28 20:05:07.630 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:07.630 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:07.631 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:05:07.631 -08 000000068 INF: FPGA: Xmit TDIYARM3 139264 6435378 1 1\n
17-02-28 20:05:07.694 -08 000000034 INF: FPGA: Recv TDIYARM3
17-02-28 20:05:07.694 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:07.695 -08 000000068 INF: ===================TDI FPGA Arm===================
17-02-28 20:05:07.696 -08 000000068 INF: ======================================
17-02-28 20:05:07.697 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:07.698 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:07.698 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:07.699 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:07.699 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:07.700 -08 000000064 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:05:07.700 -08 000000037 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:05:07.700 -08 000000064 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:05:07.700 -08 000000064 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:05:07.700 -08 000000064 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:05:07.700 -08 000000064 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:05:07.700 -08 000000037 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:05:07.700 -08 000000037 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:05:07.700 -08 000000037 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:05:07.703 -08 000000037 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:05:07.730 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:05:07.816 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:07.916 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:08.003 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:08.003 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:05:08.103 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP7680R\r
17-02-28 20:05:08.129 -08 000000063 INF: FPGA: Recv EX2MV
17-02-28 20:05:08.129 -08 000000063 INF: FPGA: Recv EX1MV
17-02-28 20:05:08.129 -08 000000064 INF: Excitation Filter 2: Moved -107 steps in 428.6221 ms
17-02-28 20:05:08.129 -08 000000037 INF: Excitation Filter 1: Moved -107 steps in 428.4719 ms
17-02-28 20:05:08.129 -08 000000037 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 428.6392 ms
17-02-28 20:05:08.129 -08 000000037 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 428.7092 ms
17-02-28 20:05:08.129 -08 000000064 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 428.7601 ms
17-02-28 20:05:08.129 -08 000000064 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 429.1973 ms
17-02-28 20:05:08.129 -08 000000037 INF: ======================================
17-02-28 20:05:08.130 -08 000000064 INF: ======================================
17-02-28 20:05:08.131 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:08.132 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:08.133 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:05:08.133 -08 000000044 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:08.133 -08 000000092 INF: ===================FPGA Z Wait===================
17-02-28 20:05:08.133 -08 000000034 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:08.133 -08 000000092 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:05:08.133 -08 000000034 INF: Y Motor: Moving to 14.9054 mm @6.500 mm/sec, started at 64.5538 mm
17-02-28 20:05:08.133 -08 000000034 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:08.133 -08 000000034 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:08.133 -08 000000073 INF: ===================Camera TDI, Parallel===================
17-02-28 20:05:08.134 -08 000000044 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:05:08.134 -08 000000044 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:05:08.134 -08 000000067 INF: ===================Camera TDI===================
17-02-28 20:05:08.134 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:05:08.136 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:08.136 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:08.136 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:08.136 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:08.191 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:08.192 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:05:08.192 -08 000000034 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:08.192 -08 000000034 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:08.255 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:05:08.255 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:08.286 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:08.286 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:08.287 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:08.287 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:08.291 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:08.317 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:05:08.317 -08 000000034 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:08.317 -08 000000034 INF: Y Motor: Set target position to 990544 encoder counts
17-02-28 20:05:08.317 -08 000000034 INF: Y Motor: Xmit s r0xca 990544\r
17-02-28 20:05:08.377 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:08.378 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:05:08.378 -08 000000034 INF: Y Motor: Start the move command
17-02-28 20:05:08.378 -08 000000034 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:08.436 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:08.436 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:08.437 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:08.437 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:08.442 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:05:08.442 -08 000000034 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:05:08.442 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:08.500 -08 000000025 INF: FPGA: Recv ZWAIT 
17-02-28 20:05:08.500 -08 000000092 INF: ======================================
17-02-28 20:05:08.568 -08 000000034 INF: Y Motor: Unshifted Position: 5892875
17-02-28 20:05:08.586 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:08.586 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:08.586 -08 000000077 INF: ===================Camera #2 Frame #5===================
17-02-28 20:05:08.587 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:08.587 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:08.587 -08 000000067 INF: ===================Camera #0 Frame #5===================
17-02-28 20:05:08.618 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:08.627 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:08.688 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:08.739 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:08.752 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:05:08.752 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:05:08.752 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:05:08.752 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:05:08.752 -08 000000067 INF: ===================Camera #0 Frame #11===================
17-02-28 20:05:08.752 -08 000000077 INF: ===================Camera #2 Frame #11===================
17-02-28 20:05:08.879 -08 000000034 INF: Y Motor: Unshifted Position: 5690724
17-02-28 20:05:08.920 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:05:08.920 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:05:08.920 -08 000000067 INF: ===================Camera #0 Frame #17===================
17-02-28 20:05:08.921 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:05:08.921 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:05:08.921 -08 000000077 INF: ===================Camera #2 Frame #17===================
17-02-28 20:05:08.929 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:08.938 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:09.001 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:09.054 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:09.088 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:05:09.088 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:05:09.088 -08 000000067 INF: ===================Camera #0 Frame #23===================
17-02-28 20:05:09.090 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:05:09.090 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:05:09.090 -08 000000077 INF: ===================Camera #2 Frame #23===================
17-02-28 20:05:09.190 -08 000000034 INF: Y Motor: Unshifted Position: 5486418
17-02-28 20:05:09.240 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:09.251 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:09.256 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:05:09.256 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:05:09.256 -08 000000067 INF: ===================Camera #0 Frame #29===================
17-02-28 20:05:09.259 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:05:09.259 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:05:09.259 -08 000000077 INF: ===================Camera #2 Frame #29===================
17-02-28 20:05:09.314 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:09.365 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:09.425 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:05:09.425 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:05:09.425 -08 000000067 INF: ===================Camera #0 Frame #36===================
17-02-28 20:05:09.428 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:05:09.428 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:05:09.428 -08 000000077 INF: ===================Camera #2 Frame #36===================
17-02-28 20:05:09.501 -08 000000034 INF: Y Motor: Unshifted Position: 5284263
17-02-28 20:05:09.551 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:09.564 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:09.596 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:05:09.596 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:05:09.596 -08 000000067 INF: ===================Camera #0 Frame #42===================
17-02-28 20:05:09.600 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:05:09.600 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:05:09.600 -08 000000077 INF: ===================Camera #2 Frame #42===================
17-02-28 20:05:09.624 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:09.675 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:09.765 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:05:09.765 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:05:09.765 -08 000000067 INF: ===================Camera #0 Frame #48===================
17-02-28 20:05:09.769 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:05:09.769 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:05:09.769 -08 000000077 INF: ===================Camera #2 Frame #48===================
17-02-28 20:05:09.813 -08 000000034 INF: Y Motor: Unshifted Position: 5079938
17-02-28 20:05:09.863 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:09.874 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:09.935 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:05:09.935 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:05:09.935 -08 000000067 INF: ===================Camera #0 Frame #54===================
17-02-28 20:05:09.938 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:09.940 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:05:09.940 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:05:09.940 -08 000000077 INF: ===================Camera #2 Frame #54===================
17-02-28 20:05:09.989 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.103 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:05:10.103 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:05:10.103 -08 000000067 INF: ===================Camera #0 Frame #60===================
17-02-28 20:05:10.109 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:05:10.109 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:05:10.109 -08 000000077 INF: ===================Camera #2 Frame #61===================
17-02-28 20:05:10.125 -08 000000034 INF: Y Motor: Unshifted Position: 4878442
17-02-28 20:05:10.175 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.188 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:10.248 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:10.273 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:05:10.273 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:05:10.273 -08 000000067 INF: ===================Camera #0 Frame #67===================
17-02-28 20:05:10.282 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:05:10.282 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:05:10.282 -08 000000077 INF: ===================Camera #2 Frame #67===================
17-02-28 20:05:10.299 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.436 -08 000000034 INF: Y Motor: Unshifted Position: 4675210
17-02-28 20:05:10.446 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:05:10.446 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:05:10.446 -08 000000067 INF: ===================Camera #0 Frame #73===================
17-02-28 20:05:10.453 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:05:10.453 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:05:10.453 -08 000000077 INF: ===================Camera #2 Frame #73===================
17-02-28 20:05:10.486 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.498 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:10.561 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:10.612 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.614 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:05:10.614 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:05:10.614 -08 000000067 INF: ===================Camera #0 Frame #79===================
17-02-28 20:05:10.622 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:05:10.622 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:05:10.622 -08 000000077 INF: ===================Camera #2 Frame #80===================
17-02-28 20:05:10.750 -08 000000034 INF: Y Motor: Unshifted Position: 4473049
17-02-28 20:05:10.784 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:05:10.784 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:05:10.784 -08 000000067 INF: ===================Camera #0 Frame #86===================
17-02-28 20:05:10.796 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:05:10.796 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:05:10.796 -08 000000077 INF: ===================Camera #2 Frame #86===================
17-02-28 20:05:10.800 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.811 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:10.874 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:10.925 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.956 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:05:10.956 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:05:10.956 -08 000000067 INF: ===================Camera #0 Frame #92===================
17-02-28 20:05:10.966 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:05:10.966 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:05:10.966 -08 000000077 INF: ===================Camera #2 Frame #92===================
17-02-28 20:05:11.062 -08 000000034 INF: Y Motor: Unshifted Position: 4268954
17-02-28 20:05:11.112 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:11.124 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:11.126 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:05:11.126 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:05:11.126 -08 000000067 INF: ===================Camera #0 Frame #98===================
17-02-28 20:05:11.137 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:05:11.137 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:05:11.137 -08 000000077 INF: ===================Camera #2 Frame #99===================
17-02-28 20:05:11.184 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:11.236 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:11.295 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:05:11.295 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:05:11.295 -08 000000067 INF: ===================Camera #0 Frame #104===================
17-02-28 20:05:11.310 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:05:11.310 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:05:11.310 -08 000000077 INF: ===================Camera #2 Frame #105===================
17-02-28 20:05:11.373 -08 000000034 INF: Y Motor: Unshifted Position: 4065926
17-02-28 20:05:11.423 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:11.434 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:11.464 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:05:11.464 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:05:11.464 -08 000000067 INF: ===================Camera #0 Frame #111===================
17-02-28 20:05:11.480 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:05:11.480 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:05:11.480 -08 000000077 INF: ===================Camera #2 Frame #111===================
17-02-28 20:05:11.498 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:11.549 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:11.637 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:05:11.637 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:05:11.637 -08 000000067 INF: ===================Camera #0 Frame #117===================
17-02-28 20:05:11.651 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:05:11.651 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:05:11.651 -08 000000077 INF: ===================Camera #2 Frame #117===================
17-02-28 20:05:11.685 -08 000000034 INF: Y Motor: Unshifted Position: 3864430
17-02-28 20:05:11.735 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:11.748 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:11.807 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:05:11.807 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:05:11.807 -08 000000067 INF: ===================Camera #0 Frame #123===================
17-02-28 20:05:11.810 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:11.822 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:05:11.822 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:05:11.822 -08 000000077 INF: ===================Camera #2 Frame #124===================
17-02-28 20:05:11.861 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:11.975 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:05:11.975 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:05:11.975 -08 000000067 INF: ===================Camera #0 Frame #129===================
17-02-28 20:05:11.994 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:05:11.994 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:05:11.994 -08 000000077 INF: ===================Camera #2 Frame #130===================
17-02-28 20:05:11.996 -08 000000034 INF: Y Motor: Unshifted Position: 3661409
17-02-28 20:05:12.046 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.060 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:12.121 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:12.143 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:05:12.143 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:05:12.143 -08 000000067 INF: ===================Camera #0 Frame #136===================
17-02-28 20:05:12.165 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:05:12.165 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:05:12.165 -08 000000077 INF: ===================Camera #2 Frame #136===================
17-02-28 20:05:12.172 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.308 -08 000000034 INF: Y Motor: Unshifted Position: 3458615
17-02-28 20:05:12.316 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:05:12.316 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:05:12.316 -08 000000067 INF: ===================Camera #0 Frame #142===================
17-02-28 20:05:12.336 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:05:12.336 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:05:12.336 -08 000000077 INF: ===================Camera #2 Frame #143===================
17-02-28 20:05:12.358 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.371 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:12.434 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:12.485 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.486 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:05:12.486 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:05:12.486 -08 000000067 INF: ===================Camera #0 Frame #148===================
17-02-28 20:05:12.511 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:05:12.511 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:05:12.511 -08 000000077 INF: ===================Camera #2 Frame #149===================
17-02-28 20:05:12.620 -08 000000034 INF: Y Motor: Unshifted Position: 3254298
17-02-28 20:05:12.656 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:05:12.656 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:05:12.656 -08 000000067 INF: ===================Camera #0 Frame #154===================
17-02-28 20:05:12.670 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.682 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:05:12.682 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:05:12.682 -08 000000077 INF: ===================Camera #2 Frame #155===================
17-02-28 20:05:12.684 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:12.745 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:12.796 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.826 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:05:12.826 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:05:12.826 -08 000000067 INF: ===================Camera #0 Frame #161===================
17-02-28 20:05:12.852 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:05:12.852 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:05:12.852 -08 000000077 INF: ===================Camera #2 Frame #162===================
17-02-28 20:05:12.934 -08 000000034 INF: Y Motor: Unshifted Position: 3052799
17-02-28 20:05:12.984 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.995 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:12.999 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:05:12.999 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:05:12.999 -08 000000067 INF: ===================Camera #0 Frame #167===================
17-02-28 20:05:13.026 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:05:13.026 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:05:13.026 -08 000000077 INF: ===================Camera #2 Frame #168===================
17-02-28 20:05:13.057 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:13.107 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:13.169 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:05:13.169 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:05:13.169 -08 000000067 INF: ===================Camera #0 Frame #173===================
17-02-28 20:05:13.196 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:05:13.196 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:05:13.196 -08 000000077 INF: ===================Camera #2 Frame #174===================
17-02-28 20:05:13.307 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:13.309 -08 000000034 INF: Y Motor: Unshifted Position: 2847188
17-02-28 20:05:13.338 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:05:13.338 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:05:13.338 -08 000000067 INF: ===================Camera #0 Frame #180===================
17-02-28 20:05:13.359 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:13.372 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:13.475 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 184, frameCount = 185.
17-02-28 20:05:13.475 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 185
17-02-28 20:05:13.475 -08 000000077 INF: ===================Camera #2 Frame #185===================
17-02-28 20:05:13.484 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:13.511 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:05:13.511 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:05:13.511 -08 000000067 INF: ===================Camera #0 Frame #186===================
17-02-28 20:05:13.621 -08 000000034 INF: Y Motor: Unshifted Position: 2605390
17-02-28 20:05:13.622 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:13.663 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:05:13.663 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:05:13.663 -08 000000077 INF: ===================Camera #2 Frame #192===================
17-02-28 20:05:13.671 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:13.681 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:05:13.681 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:05:13.681 -08 000000067 INF: ===================Camera #0 Frame #192===================
17-02-28 20:05:13.682 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:13.795 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:13.836 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:05:13.836 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:05:13.836 -08 000000077 INF: ===================Camera #2 Frame #198===================
17-02-28 20:05:13.851 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:05:13.851 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:05:13.851 -08 000000067 INF: ===================Camera #0 Frame #198===================
17-02-28 20:05:13.932 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:13.933 -08 000000034 INF: Y Motor: Unshifted Position: 2403669
17-02-28 20:05:13.983 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:13.992 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:13.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:13.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:13.993 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:05:13.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:05:14.006 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-02-28 20:05:14.006 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-02-28 20:05:14.006 -08 000000077 INF: ===================Camera #2 Frame #204===================
17-02-28 20:05:14.020 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:05:14.020 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:05:14.020 -08 000000067 INF: ===================Camera #0 Frame #205===================
17-02-28 20:05:14.105 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:14.176 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210.
17-02-28 20:05:14.176 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210
17-02-28 20:05:14.176 -08 000000077 INF: ===================Camera #2 Frame #210===================
17-02-28 20:05:14.193 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:05:14.193 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:05:14.193 -08 000000067 INF: ===================Camera #0 Frame #211===================
17-02-28 20:05:14.245 -08 000000034 INF: Y Motor: Unshifted Position: 2200663
17-02-28 20:05:14.295 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:14.346 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:05:14.346 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:05:14.346 -08 000000077 INF: ===================Camera #2 Frame #217===================
17-02-28 20:05:14.363 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:05:14.363 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:05:14.363 -08 000000067 INF: ===================Camera #0 Frame #217===================
17-02-28 20:05:14.419 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:14.520 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:05:14.520 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:05:14.520 -08 000000077 INF: ===================Camera #2 Frame #223===================
17-02-28 20:05:14.532 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:05:14.532 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:05:14.532 -08 000000067 INF: ===================Camera #0 Frame #224===================
17-02-28 20:05:14.556 -08 000000034 INF: Y Motor: Unshifted Position: 1997206
17-02-28 20:05:14.606 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:14.690 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 228, frameCount = 229.
17-02-28 20:05:14.690 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 229
17-02-28 20:05:14.690 -08 000000077 INF: ===================Camera #2 Frame #229===================
17-02-28 20:05:14.704 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:05:14.704 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:05:14.704 -08 000000067 INF: ===================Camera #0 Frame #230===================
17-02-28 20:05:14.729 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:14.860 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:05:14.860 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:05:14.860 -08 000000077 INF: ===================Camera #2 Frame #236===================
17-02-28 20:05:14.869 -08 000000034 INF: Y Motor: Unshifted Position: 1794847
17-02-28 20:05:14.873 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:05:14.873 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:05:14.873 -08 000000067 INF: ===================Camera #0 Frame #236===================
17-02-28 20:05:14.919 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:14.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:14.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:05:15.034 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:05:15.034 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:05:15.034 -08 000000077 INF: ===================Camera #2 Frame #242===================
17-02-28 20:05:15.043 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:05:15.043 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:05:15.043 -08 000000067 INF: ===================Camera #0 Frame #242===================
17-02-28 20:05:15.045 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.179 -08 000000034 INF: Y Motor: Unshifted Position: 1591395
17-02-28 20:05:15.204 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:05:15.204 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:05:15.204 -08 000000077 INF: ===================Camera #2 Frame #248===================
17-02-28 20:05:15.212 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:05:15.212 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:05:15.212 -08 000000067 INF: ===================Camera #0 Frame #249===================
17-02-28 20:05:15.229 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.353 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.374 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:05:15.374 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:05:15.374 -08 000000077 INF: ===================Camera #2 Frame #255===================
17-02-28 20:05:15.384 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:05:15.384 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:05:15.384 -08 000000067 INF: ===================Camera #0 Frame #255===================
17-02-28 20:05:15.493 -08 000000034 INF: Y Motor: Unshifted Position: 1389250
17-02-28 20:05:15.543 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.547 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:05:15.547 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:05:15.547 -08 000000077 INF: ===================Camera #2 Frame #261===================
17-02-28 20:05:15.552 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:05:15.552 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:05:15.552 -08 000000067 INF: ===================Camera #0 Frame #261===================
17-02-28 20:05:15.666 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.716 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:05:15.716 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:05:15.716 -08 000000077 INF: ===================Camera #2 Frame #267===================
17-02-28 20:05:15.720 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:05:15.720 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:05:15.720 -08 000000067 INF: ===================Camera #0 Frame #267===================
17-02-28 20:05:15.805 -08 000000034 INF: Y Motor: Unshifted Position: 1186229
17-02-28 20:05:15.855 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.865 -08 000000039 INF: FPGA: Recv TDIYWAIT
17-02-28 20:05:15.866 -08 000000044 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:15.867 -08 000000044 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:05:15.868 -08 000000037 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:05:15.868 -08 000000095 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:05:15.868 -08 000000037 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:05:15.868 -08 000000037 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:05:15.868 -08 000000037 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:05:15.868 -08 000000037 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:05:15.868 -08 000000095 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:05:15.868 -08 000000095 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:05:15.868 -08 000000095 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:05:15.871 -08 000000095 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:05:15.885 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:15.885 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:15.885 -08 000000077 INF: ===================Camera #2 Frame #272===================
17-02-28 20:05:15.888 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:15.888 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:15.888 -08 000000067 INF: ===================Camera #0 Frame #272===================
17-02-28 20:05:15.901 -08 000000077 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:15.902 -08 000000077 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:15.903 -08 000000067 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:15.904 -08 000000067 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:15.979 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:15.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:05:16.083 -08 000000077 INF: Camera #2 ReleaseBuffer
17-02-28 20:05:16.083 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:05:16.111 -08 000000077 INF: ======================================
17-02-28 20:05:16.115 -08 000000034 INF: Y Motor: Unshifted Position: 992640
17-02-28 20:05:16.165 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:16.202 -08 000000067 INF: Camera #0 ReleaseBuffer
17-02-28 20:05:16.202 -08 000000067 INF: ===================Camera TDI===================
17-02-28 20:05:16.234 -08 000000067 INF: ======================================
17-02-28 20:05:16.235 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:05:16.236 -08 000000073 INF: ======================================
17-02-28 20:05:16.304 -08 000000084 INF: FPGA: Recv EX1MV
17-02-28 20:05:16.304 -08 000000084 INF: FPGA: Recv EX2MV
17-02-28 20:05:16.304 -08 000000095 INF: Excitation Filter 2: Moved 107 steps in 434.4618 ms
17-02-28 20:05:16.304 -08 000000037 INF: Excitation Filter 1: Moved 107 steps in 434.6846 ms
17-02-28 20:05:16.304 -08 000000037 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 434.782 ms
17-02-28 20:05:16.304 -08 000000037 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 434.8504 ms
17-02-28 20:05:16.304 -08 000000095 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 434.5709 ms
17-02-28 20:05:16.304 -08 000000095 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 434.9803 ms
17-02-28 20:05:16.304 -08 000000037 INF: ======================================
17-02-28 20:05:16.305 -08 000000095 INF: ======================================
17-02-28 20:05:16.306 -08 000000034 INF: Y Motor: Unshifted Position: 990543
17-02-28 20:05:16.306 -08 000000044 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:16.306 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:16.306 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:16.307 -08 000000044 INF: ======================================
17-02-28 20:05:16.365 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:05:16.365 -08 000000034 INF: Y Motor: Moved to 14.9054 after 7922 ms
17-02-28 20:05:16.365 -08 000000034 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:16.430 -08 000000034 INF: Y Motor: Recv v 4097\r
17-02-28 20:05:16.430 -08 000000034 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:16.430 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:16.492 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:05:16.492 -08 000000034 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:16.492 -08 000000034 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:16.554 -08 000000034 INF: Y Motor: Recv v 134217728\r
17-02-28 20:05:16.554 -08 000000034 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:05:16.554 -08 000000034 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:16.554 -08 000000034 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:16.617 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:05:16.617 -08 000000034 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:16.617 -08 000000034 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:16.617 -08 000000034 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:16.679 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:05:16.679 -08 000000034 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:16.679 -08 000000034 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:16.743 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:05:16.743 -08 000000034 INF: ======================================
17-02-28 20:05:16.744 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:16.745 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:16.746 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:16.746 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:05:16.801 -08 000000078 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:05:16.801 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:16.865 -08 000000038 INF: FPGA: Recv TDIYERD 1490545
17-02-28 20:05:16.865 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:05:16.925 -08 000000037 INF: FPGA: Recv ZADCR 35509
17-02-28 20:05:16.925 -08 000000042 INF: At scan end Y pos = 14.905 and Z pos = -0.136. Y moved -48.539 mm
17-02-28 20:05:16.925 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:05:16.988 -08 000000090 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:05:16.988 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:05:16.988 -08 000000042 INF: TDIScan finished after 12759.9775 ms
17-02-28 20:05:16.988 -08 000000042 INF: Image[0]: Y should trigger at 63.445 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:05:16.988 -08 000000042 INF: Image[2]: Y should trigger at 63.445 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:05:16.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:16.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:16.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:05:17.022 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.859 um
17-02-28 20:05:17.023 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.023 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:05:17.052 -08 000000102 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:05:17.053 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.053 -08 000000040 INF: ===================Dither Clean Up Command===================
17-02-28 20:05:17.053 -08 000000047 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:05:17.053 -08 000000083 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:05:17.053 -08 000000033 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:05:17.054 -08 000000033 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:05:17.054 -08 000000047 INF: ======================================
17-02-28 20:05:17.054 -08 000000033 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:05:17.054 -08 000000083 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:17.054 -08 000000083 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:17.054 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:17.054 -08 000000054 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:05:17.054 -08 000000054 INF: ======================================
17-02-28 20:05:17.055 -08 000000090 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:05:17.114 -08 000000070 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:17.114 -08 000000070 INF: FPGA: Recv ZSEL 
17-02-28 20:05:17.114 -08 000000090 INF: FPGA: Xmit ZDACW 41032\n
17-02-28 20:05:17.114 -08 000000033 INF: ======================================
17-02-28 20:05:17.116 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:17.116 -08 000000083 INF: ======================================
17-02-28 20:05:17.176 -08 000000102 INF: FPGA: Recv ZDACW 
17-02-28 20:05:17.176 -08 000000090 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:05:17.177 -08 000000090 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:05:17.238 -08 000000037 INF: FPGA: Recv TDIBB
17-02-28 20:05:17.238 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:17.239 -08 000000090 INF: ======================================
17-02-28 20:05:17.240 -08 000000040 INF: ======================================
17-02-28 20:05:17.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:05:17.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:05:17.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:05:17.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:05:17.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:05:17.244 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:05:17.244 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:05:17.244 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:05:17.245 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:05:17.245 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:05:17.267 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:05:17.267 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:05:17.268 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.268 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:05:17.268 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:05:17.268 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:05:17.269 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface===================
17-02-28 20:05:17.324 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.327 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:17.327 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:17.342 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1204 Request: {"Cycle":2,"Lane":4,"Tile":1204,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF268","HCSMMF212","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.416 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:17.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.417 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:05:17.417 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:05:17.425 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1205 Request: {"Cycle":2,"Lane":4,"Tile":1205,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF237","HCSMMF284","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.507 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1206 Request: {"Cycle":2,"Lane":4,"Tile":1206,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF225","HCSMMF194","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.514 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1202 Request: {"Cycle":2,"Lane":4,"Tile":1202,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF180","HCSMMF206","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.517 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1213 Request: {"Cycle":2,"Lane":4,"Tile":1213,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF283","HCSMMF238","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.519 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1210 Request: {"Cycle":2,"Lane":4,"Tile":1210,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF247","HCSMMF220","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.521 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1212 Request: {"Cycle":2,"Lane":4,"Tile":1212,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF274","HCSMMF267","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.523 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1208 Request: {"Cycle":2,"Lane":4,"Tile":1208,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF280","HCSMMF209","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.525 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1215 Request: {"Cycle":2,"Lane":4,"Tile":1215,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF241","HCSMMF240","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.527 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1209 Request: {"Cycle":2,"Lane":4,"Tile":1209,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF226","HCSMMF205","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.529 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1207 Request: {"Cycle":2,"Lane":4,"Tile":1207,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF190","HCSMMF182","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.530 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1214 Request: {"Cycle":2,"Lane":4,"Tile":1214,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF179","HCSMMF227","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.532 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1201 Request: {"Cycle":2,"Lane":4,"Tile":1201,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF266","HCSMMF262","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.534 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1216 Request: {"Cycle":2,"Lane":4,"Tile":1216,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF177","HCSMMF242","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.535 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1217 Request: {"Cycle":2,"Lane":4,"Tile":1217,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF183","HCSMMF279","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.536 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1224 Request: {"Cycle":2,"Lane":4,"Tile":1224,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF239","HCSMMF229","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.537 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1220 Request: {"Cycle":2,"Lane":4,"Tile":1220,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF203","HCSMMF202","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.539 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1222 Request: {"Cycle":2,"Lane":4,"Tile":1222,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF261","HCSMMF249","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.540 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1203 Request: {"Cycle":2,"Lane":4,"Tile":1203,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF281","HCSMMF214","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.542 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1223 Request: {"Cycle":2,"Lane":4,"Tile":1223,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF217","HCSMMF204","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.543 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1211 Request: {"Cycle":2,"Lane":4,"Tile":1211,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF210","HCSMMF216","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.544 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1225 Request: {"Cycle":2,"Lane":4,"Tile":1225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF215","HCSMMF176","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.546 -08 000000004 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1218 Request: {"Cycle":2,"Lane":4,"Tile":1218,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF195","HCSMMF270","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.547 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1228 Request: {"Cycle":2,"Lane":4,"Tile":1228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF236","HCSMMF198","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.548 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1227 Request: {"Cycle":2,"Lane":4,"Tile":1227,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF207","HCSMMF231","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.549 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1219 Request: {"Cycle":2,"Lane":4,"Tile":1219,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF259","HCSMMF252","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.552 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1226 Request: {"Cycle":2,"Lane":4,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF218","HCSMMF276","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.552 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1221 Request: {"Cycle":2,"Lane":4,"Tile":1221,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF185","HCSMMF275","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.555 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.561 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:05:17.652 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.652 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:05:17.688 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.694 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:05:17.775 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.781 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:05:17.817 -08 000000029 INF: FPGA: Recv MIOCOMPR
17-02-28 20:05:17.817 -08 000000042 INF: Compensator: Moved OutOfPath in 399 ms
17-02-28 20:05:17.817 -08 000000042 INF: Lane 5, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:05:17.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.820 -08 000000004 INF: ===================Move Tilt Motor 1===================
17-02-28 20:05:17.820 -08 000000036 INF: ===================Move Tilt Motor 2===================
17-02-28 20:05:17.820 -08 000000063 INF: ===================Move Tilt Motor 3===================
17-02-28 20:05:17.820 -08 000000004 INF: ======================================
17-02-28 20:05:17.820 -08 000000063 INF: ======================================
17-02-28 20:05:17.821 -08 000000036 INF: ======================================
17-02-28 20:05:17.822 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.823 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.829 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:05:17.838 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:05:17.838 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:05:17.838 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:05:17.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:17.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:17.842 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:05:17.842 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:05:17.842 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:05:17.860 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.866 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:05:17.878 -08 000000099 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:17.878 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:17.878 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:05:17.879 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1565 mm
17-02-28 20:05:17.879 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:05:17.940 -08 000000034 INF: FPGA: Recv ZTRG 
17-02-28 20:05:17.940 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:05:17.951 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:17.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:05:18.002 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:05:18.002 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:05:18.002 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:05:18.064 -08 000000070 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:05:18.064 -08 000000070 INF: FPGA: Recv ZMV 
17-02-28 20:05:18.064 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:05:18.064 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.7142 ms
17-02-28 20:05:18.064 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:05:18.126 -08 000000037 INF: FPGA: Recv ZDACR 60292
17-02-28 20:05:18.126 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.406 ms w/comms
17-02-28 20:05:18.126 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:05:18.126 -08 000000042 INF: Z Motor: MoveAbsStepped took 247.5828 ms
17-02-28 20:05:18.126 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:18.127 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:05:18.136 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:05:18.136 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:18.136 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:18.136 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:05:18.136 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:05:18.191 -08 000000047 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:18.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:18.201 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:05:18.210 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:05:18.210 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:18.210 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:18.212 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:18.212 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:05:18.212 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:18.212 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = E_1
17-02-28 20:05:18.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:18.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:18.214 -08 000000094 INF: ===================Move X,Y===================
17-02-28 20:05:18.214 -08 000000100 INF: ===================MoveEmissionFilters===================
17-02-28 20:05:18.215 -08 000000094 INF: ===================Move X,Y, Parallel===================
17-02-28 20:05:18.215 -08 000000101 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:18.215 -08 000000037 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:18.215 -08 000000033 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:18.215 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:18.216 -08 000000092 INF: ===================Move X Motor without settling===================
17-02-28 20:05:18.216 -08 000000093 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:18.216 -08 000000092 INF: X Motor: Xmit PR VM\n
17-02-28 20:05:18.216 -08 000000101 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:18.216 -08 000000093 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9054 mm
17-02-28 20:05:18.216 -08 000000037 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:18.216 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:18.216 -08 000000093 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:18.216 -08 000000093 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:18.216 -08 000000033 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:18.217 -08 000000083 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:05:18.217 -08 000000059 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:05:18.217 -08 000000039 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:05:18.217 -08 000000062 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:05:18.217 -08 000000059 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:05:18.217 -08 000000051 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:05:18.217 -08 000000099 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:05:18.217 -08 000000085 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:05:18.217 -08 000000080 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:05:18.217 -08 000000059 INF: ======================================
17-02-28 20:05:18.218 -08 000000080 INF: ======================================
17-02-28 20:05:18.218 -08 000000062 INF: ======================================
17-02-28 20:05:18.218 -08 000000085 INF: ======================================
17-02-28 20:05:18.218 -08 000000039 INF: ======================================
17-02-28 20:05:18.218 -08 000000099 INF: ======================================
17-02-28 20:05:18.219 -08 000000033 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:18.220 -08 000000037 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:18.220 -08 000000083 INF: ======================================
17-02-28 20:05:18.220 -08 000000051 INF: ======================================
17-02-28 20:05:18.221 -08 000000033 INF: ======================================
17-02-28 20:05:18.221 -08 000000037 INF: ======================================
17-02-28 20:05:18.221 -08 000000101 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:18.221 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:18.222 -08 000000101 INF: ======================================
17-02-28 20:05:18.223 -08 000000036 INF: ======================================
17-02-28 20:05:18.224 -08 000000100 INF: ======================================
17-02-28 20:05:18.235 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:05:18.256 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:05:18.256 -08 000000093 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:18.256 -08 000000093 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:18.257 -08 000000092 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:05:18.257 -08 000000092 INF: X Motor: Xmit PR VI\n
17-02-28 20:05:18.317 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:05:18.317 -08 000000093 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:18.320 -08 000000092 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:05:18.320 -08 000000092 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:05:18.320 -08 000000092 INF: X Motor: Moving to 80.2456 mm @15.000 mm/sec, started at 78.0112 mm
17-02-28 20:05:18.321 -08 000000092 INF: X Motor: Xmit MA 8702\n
17-02-28 20:05:18.377 -08 000000093 INF: Y Motor: Recv v 0\r
17-02-28 20:05:18.377 -08 000000093 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:18.377 -08 000000092 INF: X Motor: Recv MA 8702\r\n>
17-02-28 20:05:18.377 -08 000000093 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:05:18.377 -08 000000093 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:05:18.377 -08 000000092 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:05:18.444 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:05:18.444 -08 000000093 INF: Y Motor: Start the move command
17-02-28 20:05:18.444 -08 000000093 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:18.506 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:05:18.506 -08 000000093 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:05:18.506 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:18.628 -08 000000093 INF: Y Motor: Unshifted Position: 1069538
17-02-28 20:05:18.678 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:18.803 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:18.939 -08 000000093 INF: Y Motor: Unshifted Position: 1769699
17-02-28 20:05:18.989 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:18.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:18.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 0 of 5 seconds left===================
17-02-28 20:05:18.995 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:18.995 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:18.995 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:05:18.995 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:19.001 -08 000000092 INF: X Motor: Xmit PR ER\n
17-02-28 20:05:19.066 -08 000000092 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:05:19.066 -08 000000092 INF: X Motor: Moved to 80.2451 after 689 ms
17-02-28 20:05:19.066 -08 000000092 INF: ======================================
17-02-28 20:05:19.093 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:19.116 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:19.189 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF)
17-02-28 20:05:19.189 -08 000000018 INF: Current Position of Pump is: 7680
17-02-28 20:05:19.252 -08 000000093 INF: Y Motor: Unshifted Position: 2557236
17-02-28 20:05:19.289 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:19.302 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:19.375 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF)
17-02-28 20:05:19.375 -08 000000018 INF: Current Position of Pump is: 7680
17-02-28 20:05:19.375 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:05:19.426 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:19.475 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD7680R\r
17-02-28 20:05:19.562 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:19.563 -08 000000093 INF: Y Motor: Unshifted Position: 3338004
17-02-28 20:05:19.613 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:19.662 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:19.740 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:19.751 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:19.876 -08 000000093 INF: Y Motor: Unshifted Position: 4113914
17-02-28 20:05:19.926 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.001 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:20.052 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.061 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:20.190 -08 000000093 INF: Y Motor: Unshifted Position: 4898843
17-02-28 20:05:20.240 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.311 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:20.363 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.375 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:20.500 -08 000000093 INF: Y Motor: Unshifted Position: 5673596
17-02-28 20:05:20.550 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.625 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:20.674 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.686 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:20.811 -08 000000093 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:05:20.861 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.936 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:20.999 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:20.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:20.999 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:05:21.000 -08 000000093 INF: Y Motor: Unshifted Position: 5953352
17-02-28 20:05:21.000 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:21.000 -08 000000093 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:21.062 -08 000000093 INF: Y Motor: Recv v 0\r
17-02-28 20:05:21.062 -08 000000093 INF: Y Motor: Moved to 64.5335 after 2556 ms
17-02-28 20:05:21.062 -08 000000093 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:21.124 -08 000000093 INF: Y Motor: Recv v 4096\r
17-02-28 20:05:21.124 -08 000000093 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:21.124 -08 000000093 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:21.188 -08 000000093 INF: Y Motor: Recv v 0\r
17-02-28 20:05:21.188 -08 000000093 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:21.188 -08 000000093 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:21.248 -08 000000093 INF: Y Motor: Recv v 402653184\r
17-02-28 20:05:21.248 -08 000000093 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:05:21.248 -08 000000093 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:21.248 -08 000000093 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:21.310 -08 000000093 INF: Y Motor: Recv v 0\r
17-02-28 20:05:21.310 -08 000000093 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:21.310 -08 000000093 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:21.310 -08 000000093 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:21.376 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:05:21.376 -08 000000093 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:21.376 -08 000000093 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:21.435 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:05:21.435 -08 000000093 INF: ======================================
17-02-28 20:05:21.437 -08 000000094 INF: ===================Move X,Y===================
17-02-28 20:05:21.438 -08 000000094 INF: ======================================
17-02-28 20:05:21.439 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:21.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:21.440 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:05:21.440 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:05:21.498 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:21.498 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:05:21.560 -08 000000004 INF: FPGA: Recv ZFREQCL
17-02-28 20:05:21.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:05:21.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:21.561 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:21.622 -08 000000039 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:05:21.622 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:05:21.622 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:21.623 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:21.624 -08 000000068 INF: ===================Set YMotor gains for scans===================
17-02-28 20:05:21.624 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:05:21.624 -08 000000068 INF: ======================================
17-02-28 20:05:21.625 -08 000000099 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:05:21.625 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:05:21.627 -08 000000099 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:05:21.627 -08 000000099 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:05:21.627 -08 000000099 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:05:21.684 -08 000000004 INF: FPGA: Recv TDIYPOS
17-02-28 20:05:21.685 -08 000000099 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:05:21.686 -08 000000099 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:05:21.686 -08 000000099 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:05:21.747 -08 000000029 INF: FPGA: Recv TDIYARM2
17-02-28 20:05:21.747 -08 000000099 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:05:21.749 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:05:21.750 -08 000000099 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:05:21.750 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:05:21.752 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:05:21.752 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:05:21.753 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:22.099 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:05:22.119 -08 000000099 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:05:22.119 -08 000000099 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:05:22.119 -08 000000099 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:22.134 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:05:22.136 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:22.185 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:22.285 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:22.371 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:22.519 -08 000000099 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:05:22.519 -08 000000099 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:05:22.519 -08 000000099 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:22.534 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:05:22.536 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:05:22.537 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:05:22.538 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:22.539 -08 000000099 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:05:22.539 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:22.541 -08 000000099 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:05:22.541 -08 000000099 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:05:22.541 -08 000000099 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:05:22.541 -08 000000099 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:05:22.556 -08 000000065 INF: FPGA: Recv ZYT 
17-02-28 20:05:22.556 -08 000000099 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:05:22.556 -08 000000099 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:05:22.618 -08 000000063 INF: FPGA: Recv ZARM
17-02-28 20:05:22.618 -08 000000099 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0295 ms
17-02-28 20:05:22.618 -08 000000099 INF: Z Motor: ArmAbsStepped took 77.2156 ms
17-02-28 20:05:22.618 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:22.620 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:05:22.621 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:22.621 -08 000000099 INF: ======================================
17-02-28 20:05:22.622 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:22.623 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:22.623 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:22.624 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:22.624 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:22.625 -08 000000025 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:05:22.625 -08 000000070 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:05:22.625 -08 000000025 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:05:22.625 -08 000000025 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:05:22.625 -08 000000025 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:05:22.625 -08 000000070 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:05:22.625 -08 000000025 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:05:22.625 -08 000000070 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:05:22.625 -08 000000070 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:05:22.628 -08 000000070 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:05:22.684 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:22.684 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:22.684 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-02-28 20:05:23.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:23.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:23.056 -08 000000090 INF: FPGA: Recv EX2MV
17-02-28 20:05:23.056 -08 000000090 INF: FPGA: Recv EX1MV
17-02-28 20:05:23.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:23.056 -08 000000070 INF: Excitation Filter 1: Moved -107 steps in 430.5727 ms
17-02-28 20:05:23.056 -08 000000025 INF: Excitation Filter 2: Moved -107 steps in 430.7624 ms
17-02-28 20:05:23.056 -08 000000070 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 430.7381 ms
17-02-28 20:05:23.056 -08 000000025 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 430.8666 ms
17-02-28 20:05:23.056 -08 000000025 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 430.9696 ms
17-02-28 20:05:23.056 -08 000000070 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 430.8472 ms
17-02-28 20:05:23.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:05:23.056 -08 000000025 INF: ======================================
17-02-28 20:05:23.056 -08 000000070 INF: ======================================
17-02-28 20:05:23.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:23.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:23.058 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:23.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:23.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:05:23.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:05:23.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°, FC temperature to 60°===================
17-02-28 20:05:23.059 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:23.060 -08 000000064 INF: ===================Serial===================
17-02-28 20:05:23.060 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:05:23.060 -08 000000063 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:23.060 -08 000000062 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:23.060 -08 000000062 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:05:23.060 -08 000000062 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:23.060 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:23.061 -08 000000064 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:05:23.061 -08 000000069 INF: ===================Camera TDI, Parallel===================
17-02-28 20:05:23.061 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:05:23.061 -08 000000063 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:05:23.061 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:05:23.062 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:05:23.062 -08 000000063 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:05:23.062 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.062 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.063 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.063 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.120 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:05:23.120 -08 000000062 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:23.120 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:23.182 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:05:23.182 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:23.213 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.213 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.213 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.213 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.244 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:05:23.244 -08 000000062 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:23.244 -08 000000062 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:05:23.244 -08 000000062 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:05:23.309 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:05:23.309 -08 000000062 INF: Y Motor: Start the move command
17-02-28 20:05:23.309 -08 000000062 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:23.363 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.363 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.363 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.363 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.371 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:05:23.371 -08 000000062 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:05:23.371 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:23.495 -08 000000062 INF: Y Motor: Unshifted Position: 5935377
17-02-28 20:05:23.513 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.513 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.513 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.513 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.545 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:23.556 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:05:23.556 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:05:23.557 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:05:23.557 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:05:23.558 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:23.558 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:23.558 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:23.559 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:23.618 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:23.618 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Selecting Reagent HIM (1)===================
17-02-28 20:05:23.618 -08 000000018 INF: Valve A1: Go to position 1
17-02-28 20:05:23.618 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:05:23.663 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:05:23.663 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:05:23.663 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:05:23.663 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:05:23.663 -08 000000085 INF: ===================Camera #0 Frame #1===================
17-02-28 20:05:23.663 -08 000000073 INF: ===================Camera #2 Frame #1===================
17-02-28 20:05:23.669 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:23.682 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 8\r
17-02-28 20:05:23.682 -08 000000018 INF: Valve A1: 18.362 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:05:23.682 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 8 to 1
17-02-28 20:05:23.682 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW1\r
17-02-28 20:05:23.682 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:05:23.682 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:05:23.808 -08 000000062 INF: Y Motor: Unshifted Position: 5888329
17-02-28 20:05:23.816 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:05:23.816 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:05:23.816 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:05:23.816 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:05:23.816 -08 000000085 INF: ===================Camera #0 Frame #3===================
17-02-28 20:05:23.816 -08 000000073 INF: ===================Camera #2 Frame #3===================
17-02-28 20:05:23.858 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:23.972 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:05:23.972 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:05:23.972 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:05:23.972 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:05:23.972 -08 000000085 INF: ===================Camera #0 Frame #4===================
17-02-28 20:05:23.972 -08 000000073 INF: ===================Camera #2 Frame #4===================
17-02-28 20:05:23.982 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:24.117 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 1\r
17-02-28 20:05:24.117 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:24.117 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:05:24.118 -08 000000062 INF: Y Motor: Unshifted Position: 5841869
17-02-28 20:05:24.125 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:24.125 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:24.125 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:24.125 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:24.125 -08 000000073 INF: ===================Camera #2 Frame #5===================
17-02-28 20:05:24.125 -08 000000085 INF: ===================Camera #0 Frame #5===================
17-02-28 20:05:24.168 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:24.178 -08 000000100 INF: FPGA: Recv ZWAIT 
17-02-28 20:05:24.178 -08 000000064 INF: ===================Serial===================
17-02-28 20:05:24.180 -08 000000064 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:05:24.180 -08 000000064 INF: ===================Serial===================
17-02-28 20:05:24.181 -08 000000064 INF: ======================================
17-02-28 20:05:24.243 -08 000000039 INF: FPGA: Recv TDIYWAIT
17-02-28 20:05:24.243 -08 000000063 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:24.245 -08 000000063 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:05:24.246 -08 000000095 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:05:24.246 -08 000000058 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:05:24.246 -08 000000095 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:05:24.246 -08 000000095 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:05:24.246 -08 000000095 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:05:24.246 -08 000000095 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:05:24.246 -08 000000058 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:05:24.246 -08 000000058 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:05:24.246 -08 000000058 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:05:24.247 -08 000000058 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:05:24.278 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:05:24.278 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:05:24.278 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:05:24.278 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:05:24.278 -08 000000085 INF: ===================Camera #0 Frame #6===================
17-02-28 20:05:24.278 -08 000000073 INF: ===================Camera #2 Frame #6===================
17-02-28 20:05:24.281 -08 000000085 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:05:24.281 -08 000000073 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:05:24.282 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:24.282 -08 000000073 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:24.295 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:24.307 -08 000000073 INF: Camera #2 ReleaseBuffer
17-02-28 20:05:24.307 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:05:24.308 -08 000000073 INF: ======================================
17-02-28 20:05:24.331 -08 000000085 INF: Camera #0 ReleaseBuffer
17-02-28 20:05:24.331 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:05:24.332 -08 000000085 INF: ======================================
17-02-28 20:05:24.333 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:05:24.335 -08 000000069 INF: ======================================
17-02-28 20:05:24.433 -08 000000062 INF: Y Motor: Unshifted Position: 5797059
17-02-28 20:05:24.483 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:24.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:24.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:24.553 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:24.615 -08 000000064 INF: FPGA: Recv EX1MV
17-02-28 20:05:24.615 -08 000000064 INF: FPGA: Recv EX2MV
17-02-28 20:05:24.615 -08 000000095 INF: Excitation Filter 1: Moved 107 steps in 368.8786 ms
17-02-28 20:05:24.615 -08 000000095 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.1516 ms
17-02-28 20:05:24.615 -08 000000095 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.2302 ms
17-02-28 20:05:24.615 -08 000000058 INF: Excitation Filter 2: Moved 107 steps in 368.5969 ms
17-02-28 20:05:24.615 -08 000000058 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.0398 ms
17-02-28 20:05:24.615 -08 000000058 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.4181 ms
17-02-28 20:05:24.615 -08 000000095 INF: ======================================
17-02-28 20:05:24.616 -08 000000058 INF: ======================================
17-02-28 20:05:24.616 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:24.617 -08 000000062 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:05:24.617 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:24.617 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:24.617 -08 000000063 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:24.618 -08 000000063 INF: ======================================
17-02-28 20:05:24.624 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 1, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 50, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:05:24.682 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:05:24.682 -08 000000062 INF: Y Motor: Moved to 62.9704 after 1311 ms
17-02-28 20:05:24.682 -08 000000062 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:24.716 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:24.743 -08 000000062 INF: Y Motor: Recv v 4097\r
17-02-28 20:05:24.743 -08 000000062 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:24.743 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:24.804 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:05:24.804 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:05:24.805 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:05:24.805 -08 000000062 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:24.805 -08 000000062 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:24.867 -08 000000062 INF: Y Motor: Recv v 134217728\r
17-02-28 20:05:24.867 -08 000000062 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:05:24.867 -08 000000062 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:24.867 -08 000000062 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:24.904 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:05:24.929 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:05:24.929 -08 000000062 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:24.929 -08 000000062 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:24.929 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:24.993 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:24.994 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:05:24.994 -08 000000062 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:24.994 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:25.056 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:05:25.056 -08 000000062 INF: ======================================
17-02-28 20:05:25.057 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:25.058 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:25.059 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.059 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:05:25.093 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:25.116 -08 000000044 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:05:25.116 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:25.178 -08 000000068 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:05:25.178 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:05:25.179 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:25.240 -08 000000038 INF: FPGA: Recv ZADCR 2427
17-02-28 20:05:25.240 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:05:25.240 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:05:25.304 -08 000000099 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:05:25.305 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:05:25.305 -08 000000042 INF: TDIScan finished after 7103.8926 ms
17-02-28 20:05:25.305 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:05:25.305 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:05:25.305 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:05:25.364 -08 000000063 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:05:25.365 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.365 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.366 -08 000000033 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:05:25.366 -08 000000069 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:05:25.366 -08 000000094 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:05:25.366 -08 000000033 INF: ======================================
17-02-28 20:05:25.366 -08 000000069 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:25.366 -08 000000069 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:25.366 -08 000000094 INF: ======================================
17-02-28 20:05:25.429 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:05:25.429 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:25.429 -08 000000069 INF: ======================================
17-02-28 20:05:25.430 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.431 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.432 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:05:25.469 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.469 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:05:25.492 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:25.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:05:25.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:05:25.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:25.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:25.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:05:25.572 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:25.572 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:05:25.572 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:05:25.592 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:05:26.101 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:26.103 -08 000000095 INF: RunCopyService queue size at 2/28/2017 8:05:26 PM is 2
17-02-28 20:05:26.202 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:26.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:05:26.288 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:26.288 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-02-28 20:05:26.310 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.088618215924358Best Z position at top surface = -0.160030672513879Best Z position at top surface + compensator offset = -0.137330672513879 C:2,L:5,T
17-02-28 20:05:26.312 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.160030672513879
17-02-28 20:05:26.312 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97693
17-02-28 20:05:26.312 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.088618215924358
17-02-28 20:05:26.312 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.63332
17-02-28 20:05:26.312 -08 000000042 INF: Z-height at LaneTopSurface is -0.160030672513879.
17-02-28 20:05:26.312 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:26.388 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP9600R\r
17-02-28 20:05:26.448 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:05:26.448 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:05:26.473 -08 000000033 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:26.473 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:26.474 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:26.475 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.475 -08 000000042 INF: Lane 5, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:05:26.475 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.476 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.477 -08 000000083 INF: ===================Move Tilt Motor 1===================
17-02-28 20:05:26.477 -08 000000036 INF: ===================Move Tilt Motor 2===================
17-02-28 20:05:26.477 -08 000000078 INF: ===================Move Tilt Motor 3===================
17-02-28 20:05:26.477 -08 000000078 INF: ======================================
17-02-28 20:05:26.477 -08 000000036 INF: ======================================
17-02-28 20:05:26.478 -08 000000083 INF: ======================================
17-02-28 20:05:26.479 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.480 -08 000000042 INF: ETF Best Z: -0.1373307 mm (36000 DAC)
17-02-28 20:05:26.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.481 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:05:26.482 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:05:26.886 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:26.887 -08 000000068 INF: FPGA: Recv MIOCOMPF
17-02-28 20:05:26.888 -08 000000042 INF: Compensator: Moved IntoPath in 406 ms
17-02-28 20:05:26.888 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.889 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.895 -08 000000042 INF: Swath 1 position calculated to be: {X=79.69164, Y=39.76308} from estimated center X= 80.20699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:05:26.895 -08 000000042 INF: Swath 2 position calculated to be: {X=80.79964, Y=39.76308} from estimated center X= 80.20699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:05:26.901 -08 000000042 INF: Swath 0: Converted transform from (-38.53743, 1.692614) pixels to (-0.013455, 0.00069) mm.
17-02-28 20:05:26.907 -08 000000042 INF: Swath 1: Converted transform from (-59.89513, 0.3256253) pixels to (-0.0207, 0) mm.
17-02-28 20:05:26.907 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:05:26.907 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:05:26.908 -08 000000042 INF: Transformed XStagePosition from 79.69164 mm to 79.6781801320612 mm.
17-02-28 20:05:26.919 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5537793554841 mm.
17-02-28 20:05:26.919 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3537793554841 mm.
17-02-28 20:05:26.919 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4445293554841 mm.
17-02-28 20:05:26.921 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:26.922 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:05:26.922 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:26.922 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = E_1
17-02-28 20:05:26.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:26.931 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:26.931 -08 000000065 INF: ===================MoveEmissionFilters===================
17-02-28 20:05:26.931 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:05:26.931 -08 000000093 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:26.932 -08 000000029 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:26.932 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:26.932 -08 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:26.932 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:26.932 -08 000000044 INF: ===================Move X,Y, Parallel===================
17-02-28 20:05:26.933 -08 000000029 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:26.933 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:26.933 -08 000000093 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:05:26.933 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:26.933 -08 000000093 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:05:26.933 -08 000000036 INF: ===================Move X Motor without settling===================
17-02-28 20:05:26.933 -08 000000083 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:26.933 -08 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:26.933 -08 000000036 INF: X Motor: Xmit PR VM\n
17-02-28 20:05:26.934 -08 000000093 INF: Z Motor: Moving to -0.1573 mm, started at -0.0100 mm
17-02-28 20:05:26.934 -08 000000051 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:05:26.934 -08 000000083 INF: Y Motor: Moving to 64.5538 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:05:26.934 -08 000000090 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:05:26.934 -08 000000101 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:05:26.934 -08 000000004 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:05:26.934 -08 000000083 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:26.934 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:26.934 -08 000000059 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:05:26.934 -08 000000069 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:05:26.934 -08 000000095 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:05:26.934 -08 000000092 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:05:26.934 -08 000000101 INF: ======================================
17-02-28 20:05:26.934 -08 000000059 INF: ======================================
17-02-28 20:05:26.935 -08 000000093 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:05:26.935 -08 000000069 INF: ======================================
17-02-28 20:05:26.935 -08 000000095 INF: ======================================
17-02-28 20:05:26.935 -08 000000004 INF: ======================================
17-02-28 20:05:26.936 -08 000000092 INF: ======================================
17-02-28 20:05:26.936 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:26.936 -08 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:26.936 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:26.937 -08 000000090 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:05:26.937 -08 000000051 INF: ======================================
17-02-28 20:05:26.937 -08 000000100 INF: ======================================
17-02-28 20:05:26.937 -08 000000090 INF: ======================================
17-02-28 20:05:26.937 -08 000000037 INF: ======================================
17-02-28 20:05:26.938 -08 000000033 INF: ======================================
17-02-28 20:05:26.938 -08 000000029 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:26.939 -08 000000029 INF: ======================================
17-02-28 20:05:26.940 -08 000000065 INF: ======================================
17-02-28 20:05:26.943 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:27.005 -08 000000078 INF: FPGA: Recv ZTRG 
17-02-28 20:05:27.005 -08 000000093 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:05:27.007 -08 000000036 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:05:27.007 -08 000000036 INF: X Motor: Xmit PR VI\n
17-02-28 20:05:27.009 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:27.009 -08 000000083 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:27.009 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:27.067 -08 000000054 INF: FPGA: Recv ZYT 
17-02-28 20:05:27.067 -08 000000093 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:05:27.067 -08 000000093 INF: FPGA: Xmit ZMV 41243\n
17-02-28 20:05:27.069 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:27.069 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:27.069 -08 000000036 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:05:27.069 -08 000000036 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:05:27.069 -08 000000036 INF: X Motor: Moving to 79.6782 mm @15.000 mm/sec, started at 80.2451 mm
17-02-28 20:05:27.069 -08 000000036 INF: X Motor: Xmit MA 8470\n
17-02-28 20:05:27.128 -08 000000033 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:05:27.128 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:05:27.130 -08 000000036 INF: X Motor: Recv MA 8470\r\n>
17-02-28 20:05:27.130 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:27.130 -08 000000083 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:27.130 -08 000000036 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:05:27.130 -08 000000083 INF: Y Motor: Set target position to 5955378 encoder counts
17-02-28 20:05:27.130 -08 000000083 INF: Y Motor: Xmit s r0xca 5955378\r
17-02-28 20:05:27.192 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:27.192 -08 000000083 INF: Y Motor: Start the move command
17-02-28 20:05:27.192 -08 000000083 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:27.193 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:27.252 -08 000000070 INF: FPGA: Recv ZMV 
17-02-28 20:05:27.252 -08 000000093 INF: Z Motor: MoveAndTrigger 'ZMV' command took 184.7193 ms
17-02-28 20:05:27.252 -08 000000093 INF: FPGA: Xmit ZDACR\n
17-02-28 20:05:27.253 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:27.254 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:27.254 -08 000000083 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:05:27.254 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:27.317 -08 000000099 INF: FPGA: Recv ZDACR 41243
17-02-28 20:05:27.317 -08 000000093 INF: Z Motor: MoveAndTrigger took 383.9321 ms w/comms
17-02-28 20:05:27.317 -08 000000093 INF: Z Motor: After move to -0.1573, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:05:27.317 -08 000000093 INF: Z Motor: MoveAbsStepped took 384.1229 ms
17-02-28 20:05:27.318 -08 000000093 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:27.319 -08 000000093 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:05:27.320 -08 000000092 INF: ===================TDI Scan Setup===================
17-02-28 20:05:27.320 -08 000000077 INF: ===================Camera Arm TDI===================
17-02-28 20:05:27.320 -08 000000092 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:27.321 -08 000000077 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:27.321 -08 000000092 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:05:27.322 -08 000000077 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:27.322 -08 000000092 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:27.322 -08 000000092 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:05:27.379 -08 000000004 INF: FPGA: Recv ZSEL 
17-02-28 20:05:27.379 -08 000000092 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:27.380 -08 000000092 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:05:27.381 -08 000000083 INF: Y Motor: Unshifted Position: 5882247
17-02-28 20:05:27.431 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:27.442 -08 000000058 INF: FPGA: Recv TDIBB
17-02-28 20:05:27.442 -08 000000092 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:27.443 -08 000000092 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:05:27.444 -08 000000092 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:27.445 -08 000000092 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:05:27.445 -08 000000092 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:05:27.445 -08 000000092 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:05:27.503 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:27.504 -08 000000004 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:27.504 -08 000000092 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:27.506 -08 000000092 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:05:27.506 -08 000000092 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:27.508 -08 000000092 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:05:27.508 -08 000000092 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:05:27.508 -08 000000092 INF: Z Motor: Arming to move to -0.1173 mm
17-02-28 20:05:27.508 -08 000000092 INF: FPGA: Xmit ZYT 6435378 4\n
17-02-28 20:05:27.557 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:27.566 -08 000000064 INF: FPGA: Recv ZYT 
17-02-28 20:05:27.567 -08 000000092 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6382247 enc / 63.822 mm / ) = 6435378 enc / 64.354 mm
17-02-28 20:05:27.567 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:27.567 -08 000000092 INF: FPGA: Xmit ZARM 30757\n
17-02-28 20:05:27.568 -08 000000036 INF: X Motor: Xmit PR ER\n
17-02-28 20:05:27.629 -08 000000099 INF: FPGA: Recv ZARM
17-02-28 20:05:27.629 -08 000000092 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.2176 ms
17-02-28 20:05:27.629 -08 000000092 INF: Z Motor: ArmAbsStepped took 120.8806 ms
17-02-28 20:05:27.629 -08 000000092 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:27.630 -08 000000092 INF: ===================TDI Scan Setup===================
17-02-28 20:05:27.631 -08 000000036 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:05:27.631 -08 000000036 INF: X Motor: Moved to 79.6787 after 501 ms
17-02-28 20:05:27.631 -08 000000036 INF: ======================================
17-02-28 20:05:27.632 -08 000000092 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:05:27.632 -08 000000092 INF: ===================TDI Scan Setup===================
17-02-28 20:05:27.634 -08 000000092 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:05:27.634 -08 000000092 INF: ===================TDI Scan Setup===================
17-02-28 20:05:27.635 -08 000000092 INF: ======================================
17-02-28 20:05:27.694 -08 000000083 INF: Y Motor: Unshifted Position: 5955380
17-02-28 20:05:27.694 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:27.694 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:27.754 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:27.754 -08 000000083 INF: Y Motor: Moved to 64.5538 after 500 ms
17-02-28 20:05:27.754 -08 000000083 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:27.816 -08 000000083 INF: Y Motor: Recv v 4096\r
17-02-28 20:05:27.816 -08 000000083 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:27.816 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:27.817 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:27.879 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:27.880 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:27.880 -08 000000083 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:27.880 -08 000000083 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:27.942 -08 000000083 INF: Y Motor: Recv v 402653184\r
17-02-28 20:05:27.942 -08 000000083 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:05:27.942 -08 000000083 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:27.942 -08 000000083 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:28.005 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:28.005 -08 000000083 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:28.005 -08 000000083 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:28.005 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:28.067 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:28.067 -08 000000083 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:28.067 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:28.128 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:28.128 -08 000000083 INF: ======================================
17-02-28 20:05:28.129 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:28.129 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:05:28.130 -08 000000044 INF: ======================================
17-02-28 20:05:28.189 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:28.263 -08 000000077 INF: Camera #0 AttachBuffer (imageDataPtr = 56909434928 imgPtr = 56909434928 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:05:28.264 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:05:28.264 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:28.279 -08 000000077 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:28.281 -08 000000077 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:28.439 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:28.503 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:28.753 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:28.814 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:29.064 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:29.126 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:29.290 -08 000000077 INF: Camera #2 AttachBuffer (imageDataPtr = 58721374256 imgPtr = 59627343920 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:05:29.290 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:05:29.290 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:29.305 -08 000000077 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:29.307 -08 000000077 INF: ===================Camera Arm TDI===================
17-02-28 20:05:29.308 -08 000000077 INF: ======================================
17-02-28 20:05:29.309 -08 000000093 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:29.310 -08 000000093 INF: ======================================
17-02-28 20:05:29.311 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:29.312 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:29.312 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:05:29.312 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:05:29.376 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:29.377 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:29.377 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:05:29.440 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:29.440 -08 000000090 INF: FPGA: Recv ZFREQCL
17-02-28 20:05:29.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:05:29.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:29.440 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:29.499 -08 000000084 INF: FPGA: Recv TDIYERD 6455379
17-02-28 20:05:29.499 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455379 counts (64.554 mm)
17-02-28 20:05:29.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:29.500 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:29.500 -08 000000085 INF: ===================TDI FPGA Arm===================
17-02-28 20:05:29.500 -08 000000064 INF: ===================Set YMotor gains for scans===================
17-02-28 20:05:29.501 -08 000000064 INF: ======================================
17-02-28 20:05:29.501 -08 000000085 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:29.502 -08 000000085 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:05:29.502 -08 000000085 INF: FPGA: Xmit TDIYPOS 6344453\n
17-02-28 20:05:29.561 -08 000000080 INF: FPGA: Recv TDIYPOS
17-02-28 20:05:29.561 -08 000000085 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:29.562 -08 000000085 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:05:29.563 -08 000000085 INF: FPGA: Xmit TDIYARM3 139264 6435378 1 1\n
17-02-28 20:05:29.625 -08 000000038 INF: FPGA: Recv TDIYARM3
17-02-28 20:05:29.625 -08 000000085 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:29.626 -08 000000085 INF: ===================TDI FPGA Arm===================
17-02-28 20:05:29.627 -08 000000085 INF: ======================================
17-02-28 20:05:29.628 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:29.629 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:29.629 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:29.629 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:29.630 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:29.633 -08 000000033 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:05:29.633 -08 000000073 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:05:29.633 -08 000000033 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:05:29.633 -08 000000033 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:05:29.633 -08 000000033 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:05:29.633 -08 000000073 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:05:29.633 -08 000000073 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:05:29.633 -08 000000073 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:05:29.633 -08 000000033 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:05:29.634 -08 000000073 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:05:29.690 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:29.749 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:29.998 -08 000000070 INF: FPGA: Recv EX2MV
17-02-28 20:05:29.998 -08 000000070 INF: FPGA: Recv EX1MV
17-02-28 20:05:29.998 -08 000000073 INF: Excitation Filter 1: Moved -107 steps in 364.6774 ms
17-02-28 20:05:29.998 -08 000000073 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 364.7716 ms
17-02-28 20:05:29.998 -08 000000073 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 364.8428 ms
17-02-28 20:05:29.998 -08 000000033 INF: Excitation Filter 2: Moved -107 steps in 364.8424 ms
17-02-28 20:05:29.998 -08 000000033 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.0324 ms
17-02-28 20:05:29.998 -08 000000033 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.0994 ms
17-02-28 20:05:29.998 -08 000000073 INF: ======================================
17-02-28 20:05:29.998 -08 000000033 INF: ======================================
17-02-28 20:05:29.999 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:29.999 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:30.000 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:30.001 -08 000000065 INF: ===================Camera TDI===================
17-02-28 20:05:30.001 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:30.001 -08 000000100 INF: ===================FPGA Z Wait===================
17-02-28 20:05:30.001 -08 000000025 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:30.001 -08 000000100 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:05:30.002 -08 000000025 INF: Y Motor: Moving to 14.9054 mm @6.500 mm/sec, started at 64.5538 mm
17-02-28 20:05:30.002 -08 000000025 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:30.002 -08 000000025 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:30.002 -08 000000065 INF: ===================Camera TDI, Parallel===================
17-02-28 20:05:30.002 -08 000000047 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:05:30.003 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:05:30.003 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:05:30.003 -08 000000047 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:05:30.004 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:30.004 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:30.005 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:30.005 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:30.063 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:30.064 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:05:30.064 -08 000000025 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:30.064 -08 000000025 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:30.126 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:05:30.126 -08 000000025 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:30.155 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:30.155 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:30.155 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:30.155 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:30.188 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:05:30.188 -08 000000025 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:30.188 -08 000000025 INF: Y Motor: Set target position to 990544 encoder counts
17-02-28 20:05:30.188 -08 000000025 INF: Y Motor: Xmit s r0xca 990544\r
17-02-28 20:05:30.250 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:05:30.250 -08 000000025 INF: Y Motor: Start the move command
17-02-28 20:05:30.250 -08 000000025 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:30.305 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:30.305 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:30.305 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:30.305 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:30.313 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:30.314 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:05:30.314 -08 000000025 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:05:30.314 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:30.374 -08 000000031 INF: FPGA: Recv ZWAIT 
17-02-28 20:05:30.374 -08 000000100 INF: ======================================
17-02-28 20:05:30.375 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:30.438 -08 000000025 INF: Y Motor: Unshifted Position: 5892222
17-02-28 20:05:30.455 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:30.455 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:30.455 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:30.455 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:30.455 -08 000000058 INF: ===================Camera #2 Frame #5===================
17-02-28 20:05:30.455 -08 000000064 INF: ===================Camera #0 Frame #5===================
17-02-28 20:05:30.488 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:30.611 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:30.620 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:05:30.620 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:05:30.620 -08 000000064 INF: ===================Camera #0 Frame #11===================
17-02-28 20:05:30.621 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:05:30.621 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:05:30.621 -08 000000058 INF: ===================Camera #2 Frame #11===================
17-02-28 20:05:30.625 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:30.687 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:30.751 -08 000000025 INF: Y Motor: Unshifted Position: 5689424
17-02-28 20:05:30.790 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:05:30.790 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:05:30.790 -08 000000064 INF: ===================Camera #0 Frame #17===================
17-02-28 20:05:30.792 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:05:30.792 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:05:30.792 -08 000000058 INF: ===================Camera #2 Frame #17===================
17-02-28 20:05:30.801 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:30.925 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:30.937 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:30.960 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:05:30.960 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:05:30.960 -08 000000064 INF: ===================Camera #0 Frame #23===================
17-02-28 20:05:30.963 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:05:30.963 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:05:30.963 -08 000000058 INF: ===================Camera #2 Frame #23===================
17-02-28 20:05:30.998 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:31.063 -08 000000025 INF: Y Motor: Unshifted Position: 5487068
17-02-28 20:05:31.113 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:31.130 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:05:31.130 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:05:31.130 -08 000000064 INF: ===================Camera #0 Frame #29===================
17-02-28 20:05:31.134 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:05:31.134 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:05:31.134 -08 000000058 INF: ===================Camera #2 Frame #30===================
17-02-28 20:05:31.237 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:31.248 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:31.300 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:05:31.300 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:05:31.300 -08 000000064 INF: ===================Camera #0 Frame #36===================
17-02-28 20:05:31.308 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:05:31.308 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:05:31.308 -08 000000058 INF: ===================Camera #2 Frame #36===================
17-02-28 20:05:31.311 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:31.375 -08 000000025 INF: Y Motor: Unshifted Position: 5283611
17-02-28 20:05:31.425 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:31.473 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:05:31.473 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:05:31.473 -08 000000064 INF: ===================Camera #0 Frame #42===================
17-02-28 20:05:31.479 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:05:31.479 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:05:31.479 -08 000000058 INF: ===================Camera #2 Frame #42===================
17-02-28 20:05:31.549 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:31.561 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:31.622 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:31.643 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:05:31.643 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:05:31.643 -08 000000064 INF: ===================Camera #0 Frame #48===================
17-02-28 20:05:31.650 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:05:31.650 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:05:31.650 -08 000000058 INF: ===================Camera #2 Frame #49===================
17-02-28 20:05:31.685 -08 000000025 INF: Y Motor: Unshifted Position: 5081242
17-02-28 20:05:31.735 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:31.813 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:05:31.813 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:05:31.813 -08 000000064 INF: ===================Camera #0 Frame #55===================
17-02-28 20:05:31.824 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:05:31.824 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:05:31.824 -08 000000058 INF: ===================Camera #2 Frame #55===================
17-02-28 20:05:31.861 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:31.872 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:31.933 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:31.986 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:05:31.986 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:05:31.986 -08 000000064 INF: ===================Camera #0 Frame #61===================
17-02-28 20:05:31.995 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:05:31.995 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:05:31.995 -08 000000058 INF: ===================Camera #2 Frame #61===================
17-02-28 20:05:31.999 -08 000000025 INF: Y Motor: Unshifted Position: 4878875
17-02-28 20:05:32.049 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:32.156 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:05:32.156 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:05:32.156 -08 000000064 INF: ===================Camera #0 Frame #67===================
17-02-28 20:05:32.166 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:05:32.166 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:05:32.166 -08 000000058 INF: ===================Camera #2 Frame #68===================
17-02-28 20:05:32.172 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:32.183 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:32.245 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:32.311 -08 000000025 INF: Y Motor: Unshifted Position: 4676078
17-02-28 20:05:32.326 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:05:32.326 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:05:32.326 -08 000000064 INF: ===================Camera #0 Frame #73===================
17-02-28 20:05:32.340 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:05:32.340 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:05:32.340 -08 000000058 INF: ===================Camera #2 Frame #74===================
17-02-28 20:05:32.361 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:32.483 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:32.495 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:32.496 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:05:32.496 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:05:32.496 -08 000000064 INF: ===================Camera #0 Frame #80===================
17-02-28 20:05:32.511 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:05:32.511 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:05:32.511 -08 000000058 INF: ===================Camera #2 Frame #80===================
17-02-28 20:05:32.558 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:32.624 -08 000000025 INF: Y Motor: Unshifted Position: 4472399
17-02-28 20:05:32.669 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:05:32.669 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:05:32.669 -08 000000064 INF: ===================Camera #0 Frame #86===================
17-02-28 20:05:32.674 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:32.682 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:05:32.682 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:05:32.682 -08 000000058 INF: ===================Camera #2 Frame #87===================
17-02-28 20:05:32.797 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:32.808 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:32.839 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:05:32.839 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:05:32.839 -08 000000064 INF: ===================Camera #0 Frame #92===================
17-02-28 20:05:32.856 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:05:32.856 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:05:32.856 -08 000000058 INF: ===================Camera #2 Frame #93===================
17-02-28 20:05:32.870 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:32.935 -08 000000025 INF: Y Motor: Unshifted Position: 4269599
17-02-28 20:05:32.985 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:33.009 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:05:33.009 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:05:33.009 -08 000000064 INF: ===================Camera #0 Frame #99===================
17-02-28 20:05:33.027 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:05:33.027 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:05:33.027 -08 000000058 INF: ===================Camera #2 Frame #99===================
17-02-28 20:05:33.109 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:33.120 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:33.180 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:05:33.180 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:05:33.180 -08 000000064 INF: ===================Camera #0 Frame #105===================
17-02-28 20:05:33.182 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:33.196 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:05:33.196 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:05:33.196 -08 000000058 INF: ===================Camera #2 Frame #105===================
17-02-28 20:05:33.245 -08 000000025 INF: Y Motor: Unshifted Position: 4066575
17-02-28 20:05:33.295 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:33.348 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:05:33.348 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:05:33.348 -08 000000064 INF: ===================Camera #0 Frame #111===================
17-02-28 20:05:33.365 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:05:33.365 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:05:33.365 -08 000000058 INF: ===================Camera #2 Frame #112===================
17-02-28 20:05:33.421 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:33.432 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:33.494 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:33.518 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:05:33.518 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:05:33.518 -08 000000064 INF: ===================Camera #0 Frame #117===================
17-02-28 20:05:33.539 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:05:33.539 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:05:33.539 -08 000000058 INF: ===================Camera #2 Frame #118===================
17-02-28 20:05:33.559 -08 000000025 INF: Y Motor: Unshifted Position: 3863561
17-02-28 20:05:33.609 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:33.688 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:05:33.688 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:05:33.688 -08 000000064 INF: ===================Camera #0 Frame #124===================
17-02-28 20:05:33.710 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:05:33.710 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:05:33.710 -08 000000058 INF: ===================Camera #2 Frame #124===================
17-02-28 20:05:33.733 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:33.744 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:33.806 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:33.861 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:05:33.861 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:05:33.861 -08 000000064 INF: ===================Camera #0 Frame #130===================
17-02-28 20:05:33.871 -08 000000025 INF: Y Motor: Unshifted Position: 3660757
17-02-28 20:05:33.881 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:05:33.881 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:05:33.881 -08 000000058 INF: ===================Camera #2 Frame #131===================
17-02-28 20:05:33.921 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.031 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:05:34.031 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:05:34.031 -08 000000064 INF: ===================Camera #0 Frame #136===================
17-02-28 20:05:34.045 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.055 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:05:34.055 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:05:34.055 -08 000000058 INF: ===================Camera #2 Frame #137===================
17-02-28 20:05:34.056 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:34.119 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:34.180 -08 000000025 INF: Y Motor: Unshifted Position: 3457963
17-02-28 20:05:34.201 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:05:34.201 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:05:34.201 -08 000000064 INF: ===================Camera #0 Frame #142===================
17-02-28 20:05:34.226 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:05:34.226 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:05:34.226 -08 000000058 INF: ===================Camera #2 Frame #143===================
17-02-28 20:05:34.230 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.355 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.369 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:34.369 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:05:34.369 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:05:34.369 -08 000000064 INF: ===================Camera #0 Frame #149===================
17-02-28 20:05:34.397 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:05:34.397 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:05:34.397 -08 000000058 INF: ===================Camera #2 Frame #150===================
17-02-28 20:05:34.430 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:34.493 -08 000000025 INF: Y Motor: Unshifted Position: 3254947
17-02-28 20:05:34.542 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:05:34.542 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:05:34.542 -08 000000064 INF: ===================Camera #0 Frame #155===================
17-02-28 20:05:34.543 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.571 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:05:34.571 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:05:34.571 -08 000000058 INF: ===================Camera #2 Frame #156===================
17-02-28 20:05:34.668 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.680 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:34.712 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:05:34.712 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:05:34.712 -08 000000064 INF: ===================Camera #0 Frame #161===================
17-02-28 20:05:34.742 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:05:34.742 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:05:34.742 -08 000000058 INF: ===================Camera #2 Frame #162===================
17-02-28 20:05:34.745 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:34.806 -08 000000025 INF: Y Motor: Unshifted Position: 3050200
17-02-28 20:05:34.856 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.882 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:05:34.882 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:05:34.882 -08 000000064 INF: ===================Camera #0 Frame #168===================
17-02-28 20:05:34.912 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:05:34.912 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:05:34.912 -08 000000058 INF: ===================Camera #2 Frame #169===================
17-02-28 20:05:34.979 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.995 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:35.054 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:35.055 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:05:35.055 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:05:35.055 -08 000000064 INF: ===================Camera #0 Frame #174===================
17-02-28 20:05:35.086 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:05:35.086 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:05:35.086 -08 000000058 INF: ===================Camera #2 Frame #175===================
17-02-28 20:05:35.116 -08 000000025 INF: Y Motor: Unshifted Position: 2849138
17-02-28 20:05:35.166 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:35.225 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:05:35.225 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:05:35.225 -08 000000064 INF: ===================Camera #0 Frame #180===================
17-02-28 20:05:35.257 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:05:35.257 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:05:35.257 -08 000000058 INF: ===================Camera #2 Frame #181===================
17-02-28 20:05:35.292 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:35.304 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:35.365 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:35.395 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:05:35.395 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:05:35.395 -08 000000064 INF: ===================Camera #0 Frame #186===================
17-02-28 20:05:35.428 -08 000000025 INF: Y Motor: Unshifted Position: 2646992
17-02-28 20:05:35.429 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:05:35.429 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:05:35.429 -08 000000058 INF: ===================Camera #2 Frame #188===================
17-02-28 20:05:35.478 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:35.565 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:05:35.565 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:05:35.565 -08 000000064 INF: ===================Camera #0 Frame #193===================
17-02-28 20:05:35.603 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:05:35.603 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:05:35.603 -08 000000058 INF: ===================Camera #2 Frame #194===================
17-02-28 20:05:35.605 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:35.615 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:35.678 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:35.738 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:05:35.738 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:05:35.738 -08 000000064 INF: ===================Camera #0 Frame #199===================
17-02-28 20:05:35.741 -08 000000025 INF: Y Motor: Unshifted Position: 2443329
17-02-28 20:05:35.773 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:05:35.773 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:05:35.773 -08 000000058 INF: ===================Camera #2 Frame #200===================
17-02-28 20:05:35.791 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:35.908 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:05:35.908 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:05:35.908 -08 000000064 INF: ===================Camera #0 Frame #205===================
17-02-28 20:05:35.915 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:35.928 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:35.944 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:05:35.944 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:05:35.944 -08 000000058 INF: ===================Camera #2 Frame #207===================
17-02-28 20:05:35.992 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:36.054 -08 000000025 INF: Y Motor: Unshifted Position: 2238577
17-02-28 20:05:36.078 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:05:36.078 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:05:36.078 -08 000000064 INF: ===================Camera #0 Frame #212===================
17-02-28 20:05:36.104 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:36.118 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:05:36.118 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:05:36.118 -08 000000058 INF: ===================Camera #2 Frame #213===================
17-02-28 20:05:36.228 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:36.243 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:36.252 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:05:36.252 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:05:36.252 -08 000000064 INF: ===================Camera #0 Frame #218===================
17-02-28 20:05:36.290 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:05:36.290 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:05:36.290 -08 000000058 INF: ===================Camera #2 Frame #219===================
17-02-28 20:05:36.304 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:36.367 -08 000000025 INF: Y Motor: Unshifted Position: 2036861
17-02-28 20:05:36.417 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:36.422 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:05:36.422 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:05:36.422 -08 000000064 INF: ===================Camera #0 Frame #224===================
17-02-28 20:05:36.461 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:05:36.461 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:05:36.461 -08 000000058 INF: ===================Camera #2 Frame #226===================
17-02-28 20:05:36.540 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:36.554 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:36.592 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:05:36.592 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:05:36.592 -08 000000064 INF: ===================Camera #0 Frame #230===================
17-02-28 20:05:36.615 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:36.635 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:05:36.635 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:05:36.635 -08 000000058 INF: ===================Camera #2 Frame #232===================
17-02-28 20:05:36.678 -08 000000025 INF: Y Motor: Unshifted Position: 1834493
17-02-28 20:05:36.728 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:36.762 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:05:36.762 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:05:36.762 -08 000000064 INF: ===================Camera #0 Frame #237===================
17-02-28 20:05:36.806 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:05:36.806 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:05:36.806 -08 000000058 INF: ===================Camera #2 Frame #238===================
17-02-28 20:05:36.853 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:36.865 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:36.928 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:36.935 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:05:36.935 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:05:36.935 -08 000000064 INF: ===================Camera #0 Frame #243===================
17-02-28 20:05:36.977 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:05:36.977 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:05:36.977 -08 000000058 INF: ===================Camera #2 Frame #245===================
17-02-28 20:05:36.991 -08 000000025 INF: Y Motor: Unshifted Position: 1631040
17-02-28 20:05:37.041 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.105 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:05:37.105 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:05:37.105 -08 000000064 INF: ===================Camera #0 Frame #249===================
17-02-28 20:05:37.151 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:05:37.151 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:05:37.151 -08 000000058 INF: ===================Camera #2 Frame #251===================
17-02-28 20:05:37.164 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.178 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:37.241 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:37.275 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:05:37.275 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:05:37.275 -08 000000064 INF: ===================Camera #0 Frame #256===================
17-02-28 20:05:37.302 -08 000000025 INF: Y Motor: Unshifted Position: 1427367
17-02-28 20:05:37.322 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:05:37.322 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:05:37.322 -08 000000058 INF: ===================Camera #2 Frame #257===================
17-02-28 20:05:37.352 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.448 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:05:37.448 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:05:37.448 -08 000000064 INF: ===================Camera #0 Frame #262===================
17-02-28 20:05:37.476 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.491 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:37.493 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:05:37.493 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:05:37.493 -08 000000058 INF: ===================Camera #2 Frame #264===================
17-02-28 20:05:37.552 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:37.615 -08 000000025 INF: Y Motor: Unshifted Position: 1225211
17-02-28 20:05:37.618 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:05:37.618 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:05:37.618 -08 000000064 INF: ===================Camera #0 Frame #268===================
17-02-28 20:05:37.665 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.667 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:05:37.667 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:05:37.667 -08 000000058 INF: ===================Camera #2 Frame #270===================
17-02-28 20:05:37.737 -08 000000029 INF: FPGA: Recv TDIYWAIT
17-02-28 20:05:37.737 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:37.738 -08 000000047 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:05:37.739 -08 000000037 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:05:37.740 -08 000000039 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:05:37.740 -08 000000037 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:05:37.740 -08 000000037 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:05:37.740 -08 000000037 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:05:37.740 -08 000000039 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:05:37.740 -08 000000037 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:05:37.740 -08 000000039 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:05:37.740 -08 000000039 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:05:37.741 -08 000000039 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:05:37.788 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.788 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:37.788 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:37.788 -08 000000064 INF: ===================Camera #0 Frame #272===================
17-02-28 20:05:37.801 -08 000000064 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:37.802 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:37.802 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:37.864 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:37.925 -08 000000025 INF: Y Motor: Unshifted Position: 1022415
17-02-28 20:05:37.968 -08 000000064 INF: Camera #0 ReleaseBuffer
17-02-28 20:05:37.968 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:37.968 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:37.968 -08 000000058 INF: ===================Camera #2 Frame #272===================
17-02-28 20:05:37.968 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:05:37.975 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.975 -08 000000058 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:37.976 -08 000000058 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:37.998 -08 000000064 INF: ======================================
17-02-28 20:05:38.110 -08 000000029 INF: FPGA: Recv EX2MV
17-02-28 20:05:38.110 -08 000000029 INF: FPGA: Recv EX1MV
17-02-28 20:05:38.110 -08 000000039 INF: Excitation Filter 1: Moved 107 steps in 370.2631 ms
17-02-28 20:05:38.110 -08 000000039 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.3905 ms
17-02-28 20:05:38.110 -08 000000039 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.4598 ms
17-02-28 20:05:38.110 -08 000000037 INF: Excitation Filter 2: Moved 107 steps in 370.4567 ms
17-02-28 20:05:38.110 -08 000000037 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.6475 ms
17-02-28 20:05:38.110 -08 000000037 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.7737 ms
17-02-28 20:05:38.110 -08 000000039 INF: ======================================
17-02-28 20:05:38.111 -08 000000037 INF: ======================================
17-02-28 20:05:38.112 -08 000000025 INF: Y Motor: Unshifted Position: 990543
17-02-28 20:05:38.112 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:38.112 -08 000000025 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:38.112 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:38.113 -08 000000047 INF: ======================================
17-02-28 20:05:38.114 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:38.228 -08 000000058 INF: Camera #2 ReleaseBuffer
17-02-28 20:05:38.229 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:38.229 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:05:38.230 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:05:38.230 -08 000000025 INF: Y Motor: Moved to 14.9054 after 7915 ms
17-02-28 20:05:38.230 -08 000000025 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:38.264 -08 000000058 INF: ======================================
17-02-28 20:05:38.265 -08 000000065 INF: ===================Camera TDI===================
17-02-28 20:05:38.266 -08 000000065 INF: ======================================
17-02-28 20:05:38.284 -08 000000025 INF: Y Motor: Recv v 4097\r
17-02-28 20:05:38.284 -08 000000025 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:38.284 -08 000000025 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:38.347 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:05:38.347 -08 000000025 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:38.347 -08 000000025 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:38.411 -08 000000025 INF: Y Motor: Recv v 134217728\r
17-02-28 20:05:38.411 -08 000000025 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:05:38.411 -08 000000025 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:38.411 -08 000000025 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:38.471 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:05:38.471 -08 000000025 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:38.471 -08 000000025 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:38.471 -08 000000025 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:38.479 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:38.536 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:38.537 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:05:38.537 -08 000000025 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:38.537 -08 000000025 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:38.596 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:05:38.596 -08 000000025 INF: ======================================
17-02-28 20:05:38.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:38.598 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:38.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:38.599 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:05:38.656 -08 000000033 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:05:38.656 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:38.721 -08 000000039 INF: FPGA: Recv TDIYERD 1490545
17-02-28 20:05:38.721 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:05:38.783 -08 000000093 INF: FPGA: Recv ZADCR 35840
17-02-28 20:05:38.783 -08 000000042 INF: At scan end Y pos = 14.905 and Z pos = -0.137. Y moved -48.539 mm
17-02-28 20:05:38.783 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:05:38.786 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:38.845 -08 000000025 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:05:38.845 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:05:38.845 -08 000000042 INF: TDIScan finished after 11936.7377 ms
17-02-28 20:05:38.845 -08 000000042 INF: Image[0]: Y should trigger at 63.445 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:05:38.845 -08 000000042 INF: Image[2]: Y should trigger at 63.445 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:05:38.846 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:38.847 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:38.879 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.491 um
17-02-28 20:05:38.879 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:38.880 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:05:38.908 -08 000000037 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:05:38.908 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:38.909 -08 000000068 INF: ===================Dither Clean Up Command===================
17-02-28 20:05:38.909 -08 000000047 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:05:38.909 -08 000000078 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:05:38.909 -08 000000100 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:05:38.910 -08 000000100 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:05:38.910 -08 000000047 INF: ======================================
17-02-28 20:05:38.910 -08 000000100 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:05:38.910 -08 000000078 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:38.910 -08 000000078 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:38.910 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:38.910 -08 000000063 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:05:38.910 -08 000000063 INF: ======================================
17-02-28 20:05:38.911 -08 000000073 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:05:38.970 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:38.970 -08 000000051 INF: FPGA: Recv ZSEL 
17-02-28 20:05:38.970 -08 000000073 INF: FPGA: Xmit ZDACW 41243\n
17-02-28 20:05:38.970 -08 000000100 INF: ======================================
17-02-28 20:05:38.972 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:05:38.972 -08 000000078 INF: ======================================
17-02-28 20:05:39.031 -08 000000037 INF: FPGA: Recv ZDACW 
17-02-28 20:05:39.031 -08 000000073 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:05:39.032 -08 000000073 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:05:39.093 -08 000000065 INF: FPGA: Recv TDIBB
17-02-28 20:05:39.093 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:39.094 -08 000000073 INF: ======================================
17-02-28 20:05:39.095 -08 000000068 INF: ======================================
17-02-28 20:05:39.096 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:39.096 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.097 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:05:39.097 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.097 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:05:39.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:05:39.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:05:39.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:05:39.099 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:05:39.099 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:05:39.099 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-02-28 20:05:39.100 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:05:39.100 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:05:39.122 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:05:39.122 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:39.122 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:05:39.122 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.123 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:05:39.123 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:05:39.123 -08 000000042 INF: Transformed XStagePosition from 80.79964 mm to 80.7789368405938 mm.
17-02-28 20:05:39.135 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5530893554688 mm.
17-02-28 20:05:39.135 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3530893554688 mm.
17-02-28 20:05:39.135 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4438393554687 mm.
17-02-28 20:05:39.138 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.138 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:05:39.138 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.138 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -157.3 um, section = E_1
17-02-28 20:05:39.140 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:39.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:39.145 -08 000000068 INF: ===================MoveEmissionFilters===================
17-02-28 20:05:39.147 -08 000000065 INF: ===================Move X,Y===================
17-02-28 20:05:39.148 -08 000000065 INF: ===================Move X,Y, Parallel===================
17-02-28 20:05:39.150 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:39.150 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:39.151 -08 000000092 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:39.152 -08 000000092 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:39.152 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:05:39.152 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:39.153 -08 000000084 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:05:39.153 -08 000000081 INF: ===================Move X Motor without settling===================
17-02-28 20:05:39.153 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:39.153 -08 000000081 INF: X Motor: Xmit PR VM\n
17-02-28 20:05:39.157 -08 000000078 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:05:39.157 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:05:39.157 -08 000000078 INF: ======================================
17-02-28 20:05:39.157 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:39.157 -08 000000027 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:05:39.158 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:39.158 -08 000000027 INF: ======================================
17-02-28 20:05:39.160 -08 000000078 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:05:39.160 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:05:39.160 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:39.160 -08 000000078 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:05:39.160 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:39.160 -08 000000078 INF: ======================================
17-02-28 20:05:39.161 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:39.161 -08 000000027 INF: ===================Camera Arm TDI===================
17-02-28 20:05:39.161 -08 000000031 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:05:39.161 -08 000000031 INF: ======================================
17-02-28 20:05:39.162 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:05:39.162 -08 000000083 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:39.162 -08 000000027 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:39.162 -08 000000083 INF: Y Motor: Moving to 64.5531 mm @25.000 mm/sec, started at 14.9054 mm
17-02-28 20:05:39.162 -08 000000036 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:05:39.162 -08 000000083 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:39.162 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:39.162 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:39.162 -08 000000078 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:05:39.163 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:39.163 -08 000000087 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:05:39.163 -08 000000078 INF: ======================================
17-02-28 20:05:39.163 -08 000000092 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:39.163 -08 000000027 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:39.163 -08 000000031 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:05:39.163 -08 000000059 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:05:39.164 -08 000000031 INF: ======================================
17-02-28 20:05:39.164 -08 000000059 INF: ======================================
17-02-28 20:05:39.164 -08 000000092 INF: ======================================
17-02-28 20:05:39.166 -08 000000051 INF: ======================================
17-02-28 20:05:39.166 -08 000000036 INF: ======================================
17-02-28 20:05:39.167 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:39.168 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:39.168 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1102 Request: {"Cycle":2,"Lane":5,"Tile":1102,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF213","HCSMMF223","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.168 -08 000000055 INF: ======================================
17-02-28 20:05:39.170 -08 000000034 INF: ======================================
17-02-28 20:05:39.171 -08 000000068 INF: ======================================
17-02-28 20:05:39.216 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:39.224 -08 000000069 INF: FPGA: Recv ZSEL 
17-02-28 20:05:39.225 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:39.226 -08 000000081 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:05:39.226 -08 000000081 INF: X Motor: Xmit PR VI\n
17-02-28 20:05:39.226 -08 000000087 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:05:39.228 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:39.228 -08 000000083 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:39.228 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:39.280 -08 000000092 INF: FPGA: Recv TDIBB
17-02-28 20:05:39.281 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:39.282 -08 000000081 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:05:39.282 -08 000000081 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:05:39.282 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:39.282 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:39.282 -08 000000081 INF: X Motor: Moving to 80.7789 mm @15.000 mm/sec, started at 79.6787 mm
17-02-28 20:05:39.282 -08 000000081 INF: X Motor: Xmit MA 8921\n
17-02-28 20:05:39.282 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:05:39.283 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:39.285 -08 000000087 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:05:39.285 -08 000000087 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:05:39.285 -08 000000087 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:05:39.324 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1101 Request: {"Cycle":2,"Lane":5,"Tile":1101,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF218","HCSMMF276","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.325 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1105 Request: {"Cycle":2,"Lane":5,"Tile":1105,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF183","HCSMMF244","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.326 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1112 Request: {"Cycle":2,"Lane":5,"Tile":1112,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF217","HCSMMF263","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.327 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1104 Request: {"Cycle":2,"Lane":5,"Tile":1104,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF259","HCSMMF254","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.329 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1107 Request: {"Cycle":2,"Lane":5,"Tile":1107,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF197","HCSMMF178","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.330 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1103 Request: {"Cycle":2,"Lane":5,"Tile":1103,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF231","HCSMMF185","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.331 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1115 Request: {"Cycle":2,"Lane":5,"Tile":1115,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF190","HCSMMF176","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.331 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1106 Request: {"Cycle":2,"Lane":5,"Tile":1106,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF265","HCSMMF278","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.332 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1113 Request: {"Cycle":2,"Lane":5,"Tile":1113,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF201","HCSMMF211","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.333 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1111 Request: {"Cycle":2,"Lane":5,"Tile":1111,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF233","HCSMMF226","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.334 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1109 Request: {"Cycle":2,"Lane":5,"Tile":1109,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF266","HCSMMF247","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.335 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1108 Request: {"Cycle":2,"Lane":5,"Tile":1108,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF285","HCSMMF230","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.335 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1114 Request: {"Cycle":2,"Lane":5,"Tile":1114,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF256","HCSMMF232","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.336 -08 000000004 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1117 Request: {"Cycle":2,"Lane":5,"Tile":1117,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF280","HCSMMF258","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.337 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1116 Request: {"Cycle":2,"Lane":5,"Tile":1116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF214","HCSMMF250","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.337 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1110 Request: {"Cycle":2,"Lane":5,"Tile":1110,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF202","HCSMMF188","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.338 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1118 Request: {"Cycle":2,"Lane":5,"Tile":1118,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF221","HCSMMF281","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.338 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1120 Request: {"Cycle":2,"Lane":5,"Tile":1120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF264","HCSMMF200","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.339 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1121 Request: {"Cycle":2,"Lane":5,"Tile":1121,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF261","HCSMMF189","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.340 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1123 Request: {"Cycle":2,"Lane":5,"Tile":1123,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF177","HCSMMF180","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.341 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1119 Request: {"Cycle":2,"Lane":5,"Tile":1119,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF274","HCSMMF282","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.341 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1122 Request: {"Cycle":2,"Lane":5,"Tile":1122,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF229","HCSMMF219","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.343 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1127 Request: {"Cycle":2,"Lane":5,"Tile":1127,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF195","HCSMMF284","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.344 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1128 Request: {"Cycle":2,"Lane":5,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF187","HCSMMF228","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.344 -08 000000039 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:39.344 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:39.345 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1124 Request: {"Cycle":2,"Lane":5,"Tile":1124,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF234","HCSMMF181","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.346 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:39.346 -08 000000083 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:39.346 -08 000000081 INF: X Motor: Recv MA 8921\r\n>
17-02-28 20:05:39.346 -08 000000083 INF: Y Motor: Set target position to 5955309 encoder counts
17-02-28 20:05:39.346 -08 000000083 INF: Y Motor: Xmit s r0xca 5955309\r
17-02-28 20:05:39.346 -08 000000087 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:05:39.346 -08 000000081 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:05:39.346 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:39.347 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1126 Request: {"Cycle":2,"Lane":5,"Tile":1126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF270","HCSMMF237","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.348 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1125 Request: {"Cycle":2,"Lane":5,"Tile":1125,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF240","HCSMMF184","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.348 -08 000000087 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:05:39.348 -08 000000087 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:05:39.348 -08 000000087 INF: Z Motor: Arming to move to -0.1173 mm
17-02-28 20:05:39.348 -08 000000087 INF: FPGA: Xmit ZYT 6435309 4\n
17-02-28 20:05:39.350 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.356 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:05:39.406 -08 000000080 INF: FPGA: Recv ZYT 
17-02-28 20:05:39.406 -08 000000087 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490543 enc / 14.905 mm / ) = 6435309 enc / 64.353 mm
17-02-28 20:05:39.406 -08 000000087 INF: FPGA: Xmit ZARM 30757\n
17-02-28 20:05:39.408 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:39.408 -08 000000083 INF: Y Motor: Start the move command
17-02-28 20:05:39.408 -08 000000083 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:39.437 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.437 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:05:39.466 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:39.471 -08 000000100 INF: FPGA: Recv ZARM
17-02-28 20:05:39.472 -08 000000087 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.6615 ms
17-02-28 20:05:39.472 -08 000000087 INF: Z Motor: ArmAbsStepped took 123.3951 ms
17-02-28 20:05:39.472 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:39.472 -08 000000083 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:05:39.472 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:39.472 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:39.473 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:05:39.474 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.475 -08 000000087 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:05:39.475 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:05:39.477 -08 000000087 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:05:39.477 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:05:39.478 -08 000000087 INF: ======================================
17-02-28 20:05:39.479 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:05:39.532 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:39.574 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.580 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:05:39.597 -08 000000083 INF: Y Motor: Unshifted Position: 1073334
17-02-28 20:05:39.647 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:39.705 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.711 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:05:39.759 -08 000000027 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:05:39.759 -08 000000027 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:05:39.759 -08 000000027 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:39.771 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:39.774 -08 000000027 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:39.776 -08 000000027 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:39.782 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:39.797 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.843 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:39.843 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:39.843 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:39.844 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:05:39.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left===================
17-02-28 20:05:39.908 -08 000000083 INF: Y Motor: Unshifted Position: 1778041
17-02-28 20:05:39.958 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:39.970 -08 000000081 INF: X Motor: Xmit PR ER\n
17-02-28 20:05:40.032 -08 000000081 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:05:40.032 -08 000000081 INF: X Motor: Moved to 80.7798 after 686 ms
17-02-28 20:05:40.032 -08 000000081 INF: ======================================
17-02-28 20:05:40.081 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:05:40.082 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:40.218 -08 000000083 INF: Y Motor: Unshifted Position: 2558066
17-02-28 20:05:40.268 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:40.378 -08 000000027 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:05:40.378 -08 000000027 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:05:40.379 -08 000000027 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:40.393 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:40.394 -08 000000027 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:40.396 -08 000000027 INF: ===================Camera Arm TDI===================
17-02-28 20:05:40.397 -08 000000027 INF: ======================================
17-02-28 20:05:40.398 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:40.400 -08 000000084 INF: ======================================
17-02-28 20:05:40.530 -08 000000083 INF: Y Motor: Unshifted Position: 3338837
17-02-28 20:05:40.580 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:40.708 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:40.843 -08 000000083 INF: Y Motor: Unshifted Position: 4121409
17-02-28 20:05:40.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:40.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 4 of 5 seconds left===================
17-02-28 20:05:40.893 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:41.018 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:41.154 -08 000000083 INF: Y Motor: Unshifted Position: 4904688
17-02-28 20:05:41.204 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:41.332 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:41.466 -08 000000083 INF: Y Motor: Unshifted Position: 5678418
17-02-28 20:05:41.516 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:41.643 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:41.781 -08 000000083 INF: Y Motor: Unshifted Position: 5955311
17-02-28 20:05:41.781 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:41.781 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:41.841 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:41.841 -08 000000083 INF: Y Motor: Moved to 64.5531 after 2369 ms
17-02-28 20:05:41.841 -08 000000083 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:41.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:41.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left===================
17-02-28 20:05:41.903 -08 000000083 INF: Y Motor: Recv v 4096\r
17-02-28 20:05:41.903 -08 000000083 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:41.903 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:41.965 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:41.965 -08 000000083 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:41.965 -08 000000083 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:42.030 -08 000000083 INF: Y Motor: Recv v 402653184\r
17-02-28 20:05:42.030 -08 000000083 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:05:42.030 -08 000000083 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:42.030 -08 000000083 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:42.092 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:42.092 -08 000000083 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:42.092 -08 000000083 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:42.092 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:42.156 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:42.156 -08 000000083 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:42.156 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:42.216 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:42.216 -08 000000083 INF: ======================================
17-02-28 20:05:42.218 -08 000000065 INF: ===================Move X,Y===================
17-02-28 20:05:42.219 -08 000000065 INF: ======================================
17-02-28 20:05:42.219 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:42.220 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:42.220 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:05:42.220 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:05:42.278 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:42.278 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:05:42.338 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:05:42.338 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:05:42.339 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:42.339 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:42.400 -08 000000034 INF: FPGA: Recv TDIYERD 6455310
17-02-28 20:05:42.400 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455310 counts (64.553 mm)
17-02-28 20:05:42.401 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:42.401 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:42.402 -08 000000062 INF: ===================TDI FPGA Arm===================
17-02-28 20:05:42.402 -08 000000004 INF: ===================Set YMotor gains for scans===================
17-02-28 20:05:42.402 -08 000000004 INF: ======================================
17-02-28 20:05:42.402 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:42.403 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:05:42.403 -08 000000062 INF: FPGA: Xmit TDIYPOS 6344384\n
17-02-28 20:05:42.465 -08 000000073 INF: FPGA: Recv TDIYPOS
17-02-28 20:05:42.465 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:42.467 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:05:42.467 -08 000000062 INF: FPGA: Xmit TDIYARM3 139264 6435309 1 1\n
17-02-28 20:05:42.528 -08 000000095 INF: FPGA: Recv TDIYARM3
17-02-28 20:05:42.528 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:42.529 -08 000000062 INF: ===================TDI FPGA Arm===================
17-02-28 20:05:42.530 -08 000000062 INF: ======================================
17-02-28 20:05:42.531 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:42.532 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:42.532 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:42.533 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:42.533 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:42.534 -08 000000033 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:05:42.534 -08 000000027 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:05:42.534 -08 000000033 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:05:42.534 -08 000000033 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:05:42.534 -08 000000033 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:05:42.534 -08 000000027 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:05:42.534 -08 000000033 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:05:42.534 -08 000000027 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:05:42.534 -08 000000027 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:05:42.537 -08 000000027 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:05:42.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:42.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 2 of 5 seconds left===================
17-02-28 20:05:42.899 -08 000000034 INF: FPGA: Recv EX1MV
17-02-28 20:05:42.899 -08 000000034 INF: FPGA: Recv EX2MV
17-02-28 20:05:42.899 -08 000000027 INF: Excitation Filter 2: Moved -107 steps in 364.674 ms
17-02-28 20:05:42.899 -08 000000027 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 364.8842 ms
17-02-28 20:05:42.899 -08 000000027 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 364.9576 ms
17-02-28 20:05:42.899 -08 000000033 INF: Excitation Filter 1: Moved -107 steps in 364.8545 ms
17-02-28 20:05:42.899 -08 000000033 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.2602 ms
17-02-28 20:05:42.899 -08 000000033 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.3321 ms
17-02-28 20:05:42.900 -08 000000027 INF: ======================================
17-02-28 20:05:42.900 -08 000000033 INF: ======================================
17-02-28 20:05:42.901 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:42.902 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:42.903 -08 000000092 INF: ===================Camera TDI===================
17-02-28 20:05:42.903 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:42.903 -08 000000083 INF: ===================FPGA Z Wait===================
17-02-28 20:05:42.903 -08 000000094 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:42.903 -08 000000094 INF: Y Motor: Moving to 14.9048 mm @6.500 mm/sec, started at 64.5531 mm
17-02-28 20:05:42.903 -08 000000094 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:42.903 -08 000000094 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:42.903 -08 000000092 INF: ===================Camera TDI, Parallel===================
17-02-28 20:05:42.904 -08 000000047 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:05:42.904 -08 000000047 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:05:42.904 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:05:42.904 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:05:42.906 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:42.906 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:42.907 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:42.907 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:42.909 -08 000000083 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:05:42.967 -08 000000094 INF: Y Motor: Recv ok\r
17-02-28 20:05:42.967 -08 000000094 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:42.967 -08 000000094 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:43.028 -08 000000094 INF: Y Motor: Recv ok\r
17-02-28 20:05:43.028 -08 000000094 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:43.056 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:43.056 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:43.057 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:43.057 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:43.090 -08 000000094 INF: Y Motor: Recv v 0\r
17-02-28 20:05:43.090 -08 000000094 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:43.090 -08 000000094 INF: Y Motor: Set target position to 990475 encoder counts
17-02-28 20:05:43.090 -08 000000094 INF: Y Motor: Xmit s r0xca 990475\r
17-02-28 20:05:43.152 -08 000000094 INF: Y Motor: Recv ok\r
17-02-28 20:05:43.152 -08 000000094 INF: Y Motor: Start the move command
17-02-28 20:05:43.152 -08 000000094 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:43.206 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:43.206 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:43.207 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:43.207 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:43.214 -08 000000094 INF: Y Motor: Recv ok\r
17-02-28 20:05:43.214 -08 000000094 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:05:43.214 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:43.274 -08 000000058 INF: FPGA: Recv ZWAIT 
17-02-28 20:05:43.274 -08 000000083 INF: ======================================
17-02-28 20:05:43.339 -08 000000094 INF: Y Motor: Unshifted Position: 5893455
17-02-28 20:05:43.356 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:05:43.356 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:05:43.356 -08 000000039 INF: ===================Camera #0 Frame #4===================
17-02-28 20:05:43.357 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:43.357 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:43.357 -08 000000084 INF: ===================Camera #2 Frame #5===================
17-02-28 20:05:43.389 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:43.514 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:43.519 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:05:43.519 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:05:43.519 -08 000000039 INF: ===================Camera #0 Frame #10===================
17-02-28 20:05:43.523 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:05:43.523 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:05:43.523 -08 000000084 INF: ===================Camera #2 Frame #11===================
17-02-28 20:05:43.652 -08 000000094 INF: Y Motor: Unshifted Position: 5689359
17-02-28 20:05:43.687 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:05:43.687 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:05:43.687 -08 000000039 INF: ===================Camera #0 Frame #17===================
17-02-28 20:05:43.692 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:05:43.692 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:05:43.692 -08 000000084 INF: ===================Camera #2 Frame #17===================
17-02-28 20:05:43.702 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:43.826 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:43.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:43.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 1 of 5 seconds left===================
17-02-28 20:05:43.858 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:05:43.858 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:05:43.858 -08 000000039 INF: ===================Camera #0 Frame #23===================
17-02-28 20:05:43.861 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:05:43.861 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:05:43.861 -08 000000084 INF: ===================Camera #2 Frame #23===================
17-02-28 20:05:43.962 -08 000000094 INF: Y Motor: Unshifted Position: 5487863
17-02-28 20:05:44.012 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:44.026 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:05:44.026 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:05:44.026 -08 000000039 INF: ===================Camera #0 Frame #29===================
17-02-28 20:05:44.030 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:05:44.030 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:05:44.030 -08 000000084 INF: ===================Camera #2 Frame #29===================
17-02-28 20:05:44.139 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:44.194 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:05:44.194 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:05:44.194 -08 000000039 INF: ===================Camera #0 Frame #35===================
17-02-28 20:05:44.199 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:05:44.199 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:05:44.199 -08 000000084 INF: ===================Camera #2 Frame #36===================
17-02-28 20:05:44.275 -08 000000094 INF: Y Motor: Unshifted Position: 5284195
17-02-28 20:05:44.325 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:44.363 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:05:44.363 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:05:44.363 -08 000000039 INF: ===================Camera #0 Frame #42===================
17-02-28 20:05:44.372 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:05:44.372 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:05:44.372 -08 000000084 INF: ===================Camera #2 Frame #42===================
17-02-28 20:05:44.449 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:44.534 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:05:44.534 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:05:44.534 -08 000000039 INF: ===================Camera #0 Frame #48===================
17-02-28 20:05:44.541 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:05:44.541 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:05:44.541 -08 000000084 INF: ===================Camera #2 Frame #48===================
17-02-28 20:05:44.588 -08 000000094 INF: Y Motor: Unshifted Position: 5080521
17-02-28 20:05:44.638 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:44.704 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:05:44.704 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:05:44.704 -08 000000039 INF: ===================Camera #0 Frame #54===================
17-02-28 20:05:44.712 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:05:44.712 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:05:44.712 -08 000000084 INF: ===================Camera #2 Frame #54===================
17-02-28 20:05:44.763 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:44.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:44.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:44.844 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:05:44.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:44.874 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:05:44.874 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:05:44.874 -08 000000039 INF: ===================Camera #0 Frame #60===================
17-02-28 20:05:44.883 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:05:44.883 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:05:44.883 -08 000000084 INF: ===================Camera #2 Frame #61===================
17-02-28 20:05:44.898 -08 000000094 INF: Y Motor: Unshifted Position: 4879023
17-02-28 20:05:44.943 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:44.948 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.024 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF)
17-02-28 20:05:45.024 -08 000000018 INF: Current Position of Pump is: 9600
17-02-28 20:05:45.044 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:05:45.044 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:05:45.044 -08 000000039 INF: ===================Camera #0 Frame #67===================
17-02-28 20:05:45.056 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:05:45.056 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:05:45.056 -08 000000084 INF: ===================Camera #2 Frame #67===================
17-02-28 20:05:45.075 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.124 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:45.210 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF)
17-02-28 20:05:45.210 -08 000000018 INF: Current Position of Pump is: 9600
17-02-28 20:05:45.210 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC===================
17-02-28 20:05:45.211 -08 000000094 INF: Y Motor: Unshifted Position: 4674278
17-02-28 20:05:45.217 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:05:45.217 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:05:45.217 -08 000000039 INF: ===================Camera #0 Frame #73===================
17-02-28 20:05:45.226 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:05:45.226 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:05:45.226 -08 000000084 INF: ===================Camera #2 Frame #73===================
17-02-28 20:05:45.261 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.310 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD9600R\r
17-02-28 20:05:45.385 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.387 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:05:45.387 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:05:45.387 -08 000000039 INF: ===================Camera #0 Frame #79===================
17-02-28 20:05:45.396 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:45.397 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:05:45.397 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:05:45.397 -08 000000084 INF: ===================Camera #2 Frame #80===================
17-02-28 20:05:45.496 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:45.524 -08 000000094 INF: Y Motor: Unshifted Position: 4471897
17-02-28 20:05:45.557 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:05:45.557 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:05:45.557 -08 000000039 INF: ===================Camera #0 Frame #86===================
17-02-28 20:05:45.571 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:05:45.571 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:05:45.571 -08 000000084 INF: ===================Camera #2 Frame #86===================
17-02-28 20:05:45.574 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.585 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:45.698 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.730 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:05:45.730 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:05:45.730 -08 000000039 INF: ===================Camera #0 Frame #92===================
17-02-28 20:05:45.741 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:05:45.741 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:05:45.741 -08 000000084 INF: ===================Camera #2 Frame #92===================
17-02-28 20:05:45.834 -08 000000094 INF: Y Motor: Unshifted Position: 4270400
17-02-28 20:05:45.835 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:45.884 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.895 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:45.900 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:05:45.900 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:05:45.900 -08 000000039 INF: ===================Camera #0 Frame #98===================
17-02-28 20:05:45.912 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:05:45.912 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:05:45.912 -08 000000084 INF: ===================Camera #2 Frame #99===================
17-02-28 20:05:46.011 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:46.070 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:05:46.070 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:05:46.070 -08 000000039 INF: ===================Camera #0 Frame #104===================
17-02-28 20:05:46.086 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:05:46.086 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:05:46.086 -08 000000084 INF: ===================Camera #2 Frame #105===================
17-02-28 20:05:46.145 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:46.148 -08 000000094 INF: Y Motor: Unshifted Position: 4066077
17-02-28 20:05:46.199 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:46.210 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:46.241 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:05:46.241 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:05:46.241 -08 000000039 INF: ===================Camera #0 Frame #111===================
17-02-28 20:05:46.258 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:05:46.258 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:05:46.258 -08 000000084 INF: ===================Camera #2 Frame #111===================
17-02-28 20:05:46.323 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:46.414 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:05:46.414 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:05:46.414 -08 000000039 INF: ===================Camera #0 Frame #117===================
17-02-28 20:05:46.428 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:05:46.428 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:05:46.428 -08 000000084 INF: ===================Camera #2 Frame #118===================
17-02-28 20:05:46.459 -08 000000094 INF: Y Motor: Unshifted Position: 3864578
17-02-28 20:05:46.460 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:46.509 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:46.520 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:46.584 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:05:46.584 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:05:46.584 -08 000000039 INF: ===================Camera #0 Frame #123===================
17-02-28 20:05:46.602 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:05:46.602 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:05:46.602 -08 000000084 INF: ===================Camera #2 Frame #124===================
17-02-28 20:05:46.636 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:46.754 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:05:46.754 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:05:46.754 -08 000000039 INF: ===================Camera #0 Frame #130===================
17-02-28 20:05:46.770 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:46.772 -08 000000094 INF: Y Motor: Unshifted Position: 3660908
17-02-28 20:05:46.773 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:05:46.773 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:05:46.773 -08 000000084 INF: ===================Camera #2 Frame #130===================
17-02-28 20:05:46.822 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:46.833 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:46.927 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:05:46.927 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:05:46.927 -08 000000039 INF: ===================Camera #0 Frame #136===================
17-02-28 20:05:46.943 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:05:46.943 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:05:46.943 -08 000000084 INF: ===================Camera #2 Frame #137===================
17-02-28 20:05:46.946 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.083 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:47.085 -08 000000094 INF: Y Motor: Unshifted Position: 3457461
17-02-28 20:05:47.097 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:05:47.097 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:05:47.097 -08 000000039 INF: ===================Camera #0 Frame #142===================
17-02-28 20:05:47.117 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:05:47.117 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:05:47.117 -08 000000084 INF: ===================Camera #2 Frame #143===================
17-02-28 20:05:47.135 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.146 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:47.146 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:47.146 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:05:47.259 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.267 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:05:47.267 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:05:47.267 -08 000000039 INF: ===================Camera #0 Frame #148===================
17-02-28 20:05:47.287 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:05:47.287 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:05:47.287 -08 000000084 INF: ===================Camera #2 Frame #149===================
17-02-28 20:05:47.395 -08 000000094 INF: Y Motor: Unshifted Position: 3255742
17-02-28 20:05:47.437 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:05:47.437 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:05:47.437 -08 000000039 INF: ===================Camera #0 Frame #155===================
17-02-28 20:05:47.445 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.458 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:05:47.458 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:05:47.458 -08 000000084 INF: ===================Camera #2 Frame #155===================
17-02-28 20:05:47.572 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.610 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:05:47.610 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:05:47.610 -08 000000039 INF: ===================Camera #0 Frame #161===================
17-02-28 20:05:47.629 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:05:47.629 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:05:47.629 -08 000000084 INF: ===================Camera #2 Frame #162===================
17-02-28 20:05:47.708 -08 000000094 INF: Y Motor: Unshifted Position: 3052298
17-02-28 20:05:47.758 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.780 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:05:47.780 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:05:47.780 -08 000000039 INF: ===================Camera #0 Frame #167===================
17-02-28 20:05:47.803 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:05:47.803 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:05:47.803 -08 000000084 INF: ===================Camera #2 Frame #168===================
17-02-28 20:05:47.882 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.950 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:05:47.950 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:05:47.950 -08 000000039 INF: ===================Camera #0 Frame #174===================
17-02-28 20:05:47.974 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:05:47.974 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:05:47.974 -08 000000084 INF: ===================Camera #2 Frame #174===================
17-02-28 20:05:48.021 -08 000000094 INF: Y Motor: Unshifted Position: 2848640
17-02-28 20:05:48.071 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:48.123 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:05:48.123 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:05:48.123 -08 000000039 INF: ===================Camera #0 Frame #180===================
17-02-28 20:05:48.145 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:05:48.145 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:05:48.145 -08 000000084 INF: ===================Camera #2 Frame #181===================
17-02-28 20:05:48.195 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:48.246 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:05:48.293 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:05:48.293 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:05:48.293 -08 000000039 INF: ===================Camera #0 Frame #186===================
17-02-28 20:05:48.319 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:05:48.319 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:05:48.319 -08 000000084 INF: ===================Camera #2 Frame #187===================
17-02-28 20:05:48.330 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:48.331 -08 000000094 INF: Y Motor: Unshifted Position: 2646925
17-02-28 20:05:48.381 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:48.430 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:48.463 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:05:48.463 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:05:48.463 -08 000000039 INF: ===================Camera #0 Frame #192===================
17-02-28 20:05:48.490 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:05:48.490 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:05:48.490 -08 000000084 INF: ===================Camera #2 Frame #193===================
17-02-28 20:05:48.508 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:48.519 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:48.633 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:05:48.633 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:05:48.633 -08 000000039 INF: ===================Camera #0 Frame #199===================
17-02-28 20:05:48.644 -08 000000094 INF: Y Motor: Unshifted Position: 2443473
17-02-28 20:05:48.661 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:05:48.661 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:05:48.661 -08 000000084 INF: ===================Camera #2 Frame #200===================
17-02-28 20:05:48.694 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:48.769 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:48.806 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:05:48.806 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:05:48.806 -08 000000039 INF: ===================Camera #0 Frame #205===================
17-02-28 20:05:48.818 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:48.829 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:48.829 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:48.829 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:05:48.835 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:05:48.835 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:05:48.835 -08 000000084 INF: ===================Camera #2 Frame #206===================
17-02-28 20:05:48.957 -08 000000094 INF: Y Motor: Unshifted Position: 2240031
17-02-28 20:05:48.976 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:05:48.976 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:05:48.976 -08 000000039 INF: ===================Camera #0 Frame #211===================
17-02-28 20:05:49.004 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:05:49.004 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:05:49.004 -08 000000084 INF: ===================Camera #2 Frame #212===================
17-02-28 20:05:49.007 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.131 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.145 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:05:49.145 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:05:49.145 -08 000000039 INF: ===================Camera #0 Frame #218===================
17-02-28 20:05:49.175 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:05:49.175 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:05:49.175 -08 000000084 INF: ===================Camera #2 Frame #219===================
17-02-28 20:05:49.267 -08 000000094 INF: Y Motor: Unshifted Position: 2038313
17-02-28 20:05:49.317 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.318 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:05:49.318 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:05:49.318 -08 000000039 INF: ===================Camera #0 Frame #224===================
17-02-28 20:05:49.349 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:05:49.349 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:05:49.349 -08 000000084 INF: ===================Camera #2 Frame #225===================
17-02-28 20:05:49.444 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.487 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:05:49.487 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:05:49.487 -08 000000039 INF: ===================Camera #0 Frame #230===================
17-02-28 20:05:49.519 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:05:49.519 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:05:49.519 -08 000000084 INF: ===================Camera #2 Frame #231===================
17-02-28 20:05:49.574 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:49.575 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:49.575 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:49.576 -08 000000018 INF: WaitCommand(40000) start
17-02-28 20:05:49.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 40 of 40 seconds left===================
17-02-28 20:05:49.582 -08 000000094 INF: Y Motor: Unshifted Position: 1835942
17-02-28 20:05:49.632 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.657 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:05:49.657 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:05:49.657 -08 000000039 INF: ===================Camera #0 Frame #236===================
17-02-28 20:05:49.690 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:05:49.690 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:05:49.690 -08 000000084 INF: ===================Camera #2 Frame #238===================
17-02-28 20:05:49.756 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.827 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:05:49.827 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:05:49.827 -08 000000039 INF: ===================Camera #0 Frame #243===================
17-02-28 20:05:49.863 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:05:49.863 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:05:49.863 -08 000000084 INF: ===================Camera #2 Frame #244===================
17-02-28 20:05:49.892 -08 000000094 INF: Y Motor: Unshifted Position: 1631832
17-02-28 20:05:49.942 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.998 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:05:49.998 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:05:49.998 -08 000000039 INF: ===================Camera #0 Frame #249===================
17-02-28 20:05:50.034 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:05:50.034 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:05:50.034 -08 000000084 INF: ===================Camera #2 Frame #250===================
17-02-28 20:05:50.066 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:50.168 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:05:50.168 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:05:50.168 -08 000000039 INF: ===================Camera #0 Frame #255===================
17-02-28 20:05:50.205 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:05:50.205 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:05:50.205 -08 000000084 INF: ===================Camera #2 Frame #257===================
17-02-28 20:05:50.206 -08 000000094 INF: Y Motor: Unshifted Position: 1430122
17-02-28 20:05:50.256 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:50.337 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:05:50.337 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:05:50.337 -08 000000039 INF: ===================Camera #0 Frame #261===================
17-02-28 20:05:50.379 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:05:50.379 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:05:50.379 -08 000000084 INF: ===================Camera #2 Frame #263===================
17-02-28 20:05:50.380 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:50.507 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:05:50.507 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:05:50.507 -08 000000039 INF: ===================Camera #0 Frame #268===================
17-02-28 20:05:50.518 -08 000000094 INF: Y Motor: Unshifted Position: 1227305
17-02-28 20:05:50.550 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:05:50.550 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:05:50.550 -08 000000084 INF: ===================Camera #2 Frame #269===================
17-02-28 20:05:50.568 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:50.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:50.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 39 of 40 seconds left===================
17-02-28 20:05:50.640 -08 000000036 INF: FPGA: Recv TDIYWAIT
17-02-28 20:05:50.640 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:50.642 -08 000000047 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:05:50.643 -08 000000058 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:05:50.643 -08 000000063 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:05:50.643 -08 000000058 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:05:50.643 -08 000000058 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:05:50.643 -08 000000058 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:05:50.643 -08 000000063 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:05:50.643 -08 000000058 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:05:50.643 -08 000000063 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:05:50.643 -08 000000063 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:05:50.644 -08 000000063 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:05:50.680 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:50.680 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:50.680 -08 000000039 INF: ===================Camera #0 Frame #272===================
17-02-28 20:05:50.692 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:50.693 -08 000000039 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:50.694 -08 000000039 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:50.826 -08 000000039 INF: Camera #0 ReleaseBuffer
17-02-28 20:05:50.826 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:50.826 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:50.826 -08 000000084 INF: ===================Camera #2 Frame #272===================
17-02-28 20:05:50.827 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:05:50.828 -08 000000094 INF: Y Motor: Unshifted Position: 1022993
17-02-28 20:05:50.837 -08 000000084 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:50.838 -08 000000084 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:50.857 -08 000000039 INF: ======================================
17-02-28 20:05:50.878 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:51.008 -08 000000084 INF: Camera #2 ReleaseBuffer
17-02-28 20:05:51.008 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:05:51.012 -08 000000064 INF: FPGA: Recv EX2MV
17-02-28 20:05:51.012 -08 000000064 INF: FPGA: Recv EX1MV
17-02-28 20:05:51.012 -08 000000063 INF: Excitation Filter 1: Moved 107 steps in 368.8699 ms
17-02-28 20:05:51.012 -08 000000063 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.0055 ms
17-02-28 20:05:51.012 -08 000000063 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.0874 ms
17-02-28 20:05:51.012 -08 000000058 INF: Excitation Filter 2: Moved 107 steps in 369.06 ms
17-02-28 20:05:51.012 -08 000000058 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.2721 ms
17-02-28 20:05:51.012 -08 000000058 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.342 ms
17-02-28 20:05:51.012 -08 000000063 INF: ======================================
17-02-28 20:05:51.012 -08 000000058 INF: ======================================
17-02-28 20:05:51.013 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:51.014 -08 000000094 INF: Y Motor: Unshifted Position: 990474
17-02-28 20:05:51.014 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:51.014 -08 000000094 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:51.015 -08 000000047 INF: ======================================
17-02-28 20:05:51.043 -08 000000084 INF: ======================================
17-02-28 20:05:51.044 -08 000000092 INF: ===================Camera TDI===================
17-02-28 20:05:51.045 -08 000000092 INF: ======================================
17-02-28 20:05:51.076 -08 000000094 INF: Y Motor: Recv v 0\r
17-02-28 20:05:51.076 -08 000000094 INF: Y Motor: Moved to 14.9047 after 7861 ms
17-02-28 20:05:51.076 -08 000000094 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:51.142 -08 000000094 INF: Y Motor: Recv v 4097\r
17-02-28 20:05:51.142 -08 000000094 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:51.142 -08 000000094 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:51.204 -08 000000094 INF: Y Motor: Recv v 0\r
17-02-28 20:05:51.204 -08 000000094 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:51.204 -08 000000094 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:51.266 -08 000000094 INF: Y Motor: Recv v 134217728\r
17-02-28 20:05:51.266 -08 000000094 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:05:51.266 -08 000000094 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:51.266 -08 000000094 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:51.328 -08 000000094 INF: Y Motor: Recv v 0\r
17-02-28 20:05:51.328 -08 000000094 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:51.328 -08 000000094 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:51.328 -08 000000094 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:51.390 -08 000000094 INF: Y Motor: Recv ok\r
17-02-28 20:05:51.390 -08 000000094 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:51.390 -08 000000094 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:51.454 -08 000000094 INF: Y Motor: Recv ok\r
17-02-28 20:05:51.454 -08 000000094 INF: ======================================
17-02-28 20:05:51.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:51.456 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:51.457 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.457 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:05:51.512 -08 000000101 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:05:51.512 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:51.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:51.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 38 of 40 seconds left===================
17-02-28 20:05:51.577 -08 000000099 INF: FPGA: Recv TDIYERD 1490476
17-02-28 20:05:51.577 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:05:51.636 -08 000000051 INF: FPGA: Recv ZADCR 36029
17-02-28 20:05:51.636 -08 000000042 INF: At scan end Y pos = 14.905 and Z pos = -0.138. Y moved -48.539 mm
17-02-28 20:05:51.636 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:05:51.699 -08 000000039 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:05:51.699 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:05:51.699 -08 000000042 INF: TDIScan finished after 12575.3009 ms
17-02-28 20:05:51.699 -08 000000042 INF: Image[0]: Y should trigger at 63.444 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:05:51.699 -08 000000042 INF: Image[2]: Y should trigger at 63.444 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:05:51.701 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.734 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.559 um
17-02-28 20:05:51.735 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.735 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:05:51.764 -08 000000063 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:05:51.764 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.765 -08 000000065 INF: ===================Dither Clean Up Command===================
17-02-28 20:05:51.765 -08 000000059 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:05:51.765 -08 000000031 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:05:51.765 -08 000000029 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:05:51.766 -08 000000059 INF: ======================================
17-02-28 20:05:51.766 -08 000000037 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:51.766 -08 000000081 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:05:51.766 -08 000000029 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:05:51.766 -08 000000037 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:05:51.766 -08 000000031 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:51.766 -08 000000031 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:51.766 -08 000000081 INF: ======================================
17-02-28 20:05:51.767 -08 000000029 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:05:51.823 -08 000000068 INF: FPGA: Recv ZSEL 
17-02-28 20:05:51.823 -08 000000068 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:51.823 -08 000000037 INF: FPGA: Xmit ZDACW 41243\n
17-02-28 20:05:51.823 -08 000000029 INF: ======================================
17-02-28 20:05:51.825 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:05:51.825 -08 000000031 INF: ======================================
17-02-28 20:05:51.888 -08 000000090 INF: FPGA: Recv ZDACW 
17-02-28 20:05:51.888 -08 000000037 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:05:51.888 -08 000000037 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:05:51.950 -08 000000101 INF: FPGA: Recv TDIBB
17-02-28 20:05:51.950 -08 000000037 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:51.951 -08 000000037 INF: ======================================
17-02-28 20:05:51.952 -08 000000065 INF: ======================================
17-02-28 20:05:51.953 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:05:51.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:05:51.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:05:51.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:05:51.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:05:51.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:05:51.956 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 38 of 40 seconds left, Waiting for image analysis===================
17-02-28 20:05:51.956 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 38 of 40 seconds left===================
17-02-28 20:05:51.956 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:05:51.956 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:05:51.979 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:05:51.979 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:51.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:51.980 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:05:51.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:51.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:51.981 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface===================
17-02-28 20:05:51.998 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:51.999 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:51.999 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:51.999 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:52.054 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1207 Request: {"Cycle":2,"Lane":5,"Tile":1207,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF207","HCSMMF185","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.096 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:52.162 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:52.162 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:05:52.163 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:05:52.259 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1205 Request: {"Cycle":2,"Lane":5,"Tile":1205,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF284","HCSMMF273","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.262 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1203 Request: {"Cycle":2,"Lane":5,"Tile":1203,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF231","HCSMMF271","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.268 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1208 Request: {"Cycle":2,"Lane":5,"Tile":1208,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF245","HCSMMF236","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.287 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1210 Request: {"Cycle":2,"Lane":5,"Tile":1210,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF282","HCSMMF259","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.288 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1204 Request: {"Cycle":2,"Lane":5,"Tile":1204,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF228","HCSMMF252","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.289 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1216 Request: {"Cycle":2,"Lane":5,"Tile":1216,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF225","HCSMMF180","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.291 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1209 Request: {"Cycle":2,"Lane":5,"Tile":1209,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF203","HCSMMF194","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.292 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1213 Request: {"Cycle":2,"Lane":5,"Tile":1213,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF223","HCSMMF202","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.292 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1202 Request: {"Cycle":2,"Lane":5,"Tile":1202,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF184","HCSMMF181","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.293 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1215 Request: {"Cycle":2,"Lane":5,"Tile":1215,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF255","HCSMMF226","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.294 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1201 Request: {"Cycle":2,"Lane":5,"Tile":1201,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF241","HCSMMF272","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.294 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1211 Request: {"Cycle":2,"Lane":5,"Tile":1211,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF254","HCSMMF242","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.295 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1206 Request: {"Cycle":2,"Lane":5,"Tile":1206,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF176","HCSMMF253","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.296 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1220 Request: {"Cycle":2,"Lane":5,"Tile":1220,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF266","HCSMMF191","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.296 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1217 Request: {"Cycle":2,"Lane":5,"Tile":1217,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF177","HCSMMF224","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.297 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1225 Request: {"Cycle":2,"Lane":5,"Tile":1225,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF251","HCSMMF250","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.298 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1219 Request: {"Cycle":2,"Lane":5,"Tile":1219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF227","HCSMMF205","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.298 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1218 Request: {"Cycle":2,"Lane":5,"Tile":1218,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF265","HCSMMF239","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.299 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1226 Request: {"Cycle":2,"Lane":5,"Tile":1226,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF208","HCSMMF214","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.300 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1224 Request: {"Cycle":2,"Lane":5,"Tile":1224,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF217","HCSMMF218","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.301 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1222 Request: {"Cycle":2,"Lane":5,"Tile":1222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF211","HCSMMF201","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.302 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1223 Request: {"Cycle":2,"Lane":5,"Tile":1223,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF215","HCSMMF262","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.304 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1212 Request: {"Cycle":2,"Lane":5,"Tile":1212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF213","HCSMMF279","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.304 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1214 Request: {"Cycle":2,"Lane":5,"Tile":1214,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF178","HCSMMF196","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.306 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1227 Request: {"Cycle":2,"Lane":5,"Tile":1227,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF216","HCSMMF285","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.308 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1228 Request: {"Cycle":2,"Lane":5,"Tile":1228,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF221","HCSMMF281","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.310 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1221 Request: {"Cycle":2,"Lane":5,"Tile":1221,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF257","HCSMMF277","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.311 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:52.318 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:05:52.410 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:52.410 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:05:52.447 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:52.453 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:05:52.545 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:52.550 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:05:52.556 -08 000000047 INF: FPGA: Recv MIOCOMPR
17-02-28 20:05:52.556 -08 000000042 INF: Compensator: Moved OutOfPath in 393 ms
17-02-28 20:05:52.556 -08 000000042 INF: Lane 6, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:05:52.557 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:52.558 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:52.559 -08 000000051 INF: ===================Move Tilt Motor 1===================
17-02-28 20:05:52.559 -08 000000100 INF: ===================Move Tilt Motor 3===================
17-02-28 20:05:52.559 -08 000000090 INF: ===================Move Tilt Motor 2===================
17-02-28 20:05:52.559 -08 000000051 INF: ======================================
17-02-28 20:05:52.559 -08 000000090 INF: ======================================
17-02-28 20:05:52.559 -08 000000100 INF: ======================================
17-02-28 20:05:52.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:52.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:52.567 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:05:52.576 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:05:52.576 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:05:52.576 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:05:52.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:52.576 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:05:52.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 37 of 40 seconds left===================
17-02-28 20:05:52.576 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:05:52.579 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:05:52.580 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:05:52.580 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:05:52.622 -08 000000084 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:52.622 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:05:52.623 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:05:52.623 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1573 mm
17-02-28 20:05:52.623 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:05:52.639 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:52.645 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:05:52.681 -08 000000074 INF: FPGA: Recv ZTRG 
17-02-28 20:05:52.681 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:05:52.731 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:52.746 -08 000000087 INF: FPGA: Recv ZYT 
17-02-28 20:05:52.746 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:05:52.746 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:05:52.808 -08 000000096 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:05:52.808 -08 000000096 INF: FPGA: Recv ZMV 
17-02-28 20:05:52.808 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:05:52.808 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9918 ms
17-02-28 20:05:52.808 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:05:52.870 -08 000000046 INF: FPGA: Recv ZDACR 60292
17-02-28 20:05:52.870 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.3346 ms w/comms
17-02-28 20:05:52.870 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:05:52.870 -08 000000042 INF: Z Motor: MoveAbsStepped took 247.5471 ms
17-02-28 20:05:52.871 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:05:52.871 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:05:52.880 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:05:52.880 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:52.880 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:52.880 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:05:52.880 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:05:52.932 -08 000000073 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:52.943 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:05:52.943 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:05:52.952 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:05:52.952 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:52.952 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:52.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:52.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:05:52.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:52.954 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = F_1
17-02-28 20:05:52.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:52.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:52.956 -08 000000064 INF: ===================MoveEmissionFilters===================
17-02-28 20:05:52.956 -08 000000053 INF: ===================Move X,Y===================
17-02-28 20:05:52.957 -08 000000053 INF: ===================Move X,Y, Parallel===================
17-02-28 20:05:52.957 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:52.957 -08 000000009 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:52.957 -08 000000093 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:52.957 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:52.958 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:52.958 -08 000000046 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:52.958 -08 000000093 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:52.958 -08 000000051 INF: ===================Move X Motor without settling===================
17-02-28 20:05:52.958 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:52.958 -08 000000051 INF: X Motor: Xmit PR VM\n
17-02-28 20:05:52.958 -08 000000046 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9047 mm
17-02-28 20:05:52.958 -08 000000046 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:52.958 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:52.959 -08 000000087 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:05:52.959 -08 000000100 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:05:52.959 -08 000000084 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:05:52.959 -08 000000062 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:05:52.959 -08 000000084 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:05:52.959 -08 000000062 INF: ======================================
17-02-28 20:05:52.959 -08 000000087 INF: ======================================
17-02-28 20:05:52.959 -08 000000084 INF: ======================================
17-02-28 20:05:52.960 -08 000000100 INF: ======================================
17-02-28 20:05:52.961 -08 000000009 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:52.961 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:52.961 -08 000000093 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:52.961 -08 000000084 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:05:52.961 -08 000000070 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:05:52.962 -08 000000083 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:05:52.962 -08 000000085 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:05:52.962 -08 000000070 INF: ======================================
17-02-28 20:05:52.962 -08 000000084 INF: ======================================
17-02-28 20:05:52.962 -08 000000085 INF: ======================================
17-02-28 20:05:52.963 -08 000000093 INF: ======================================
17-02-28 20:05:52.963 -08 000000047 INF: ======================================
17-02-28 20:05:52.963 -08 000000009 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:52.965 -08 000000009 INF: ======================================
17-02-28 20:05:52.965 -08 000000083 INF: ======================================
17-02-28 20:05:52.966 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:52.967 -08 000000101 INF: ======================================
17-02-28 20:05:52.968 -08 000000064 INF: ======================================
17-02-28 20:05:52.996 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:05:52.996 -08 000000046 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:52.996 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:52.998 -08 000000051 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:05:52.998 -08 000000051 INF: X Motor: Xmit PR VI\n
17-02-28 20:05:53.049 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:05:53.058 -08 000000051 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:05:53.058 -08 000000051 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:05:53.058 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:05:53.058 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:53.058 -08 000000051 INF: X Motor: Moving to 83.0106 mm @15.000 mm/sec, started at 80.7798 mm
17-02-28 20:05:53.058 -08 000000051 INF: X Motor: Xmit MA 9835\n
17-02-28 20:05:53.120 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:05:53.120 -08 000000046 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:53.120 -08 000000046 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:05:53.120 -08 000000046 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:05:53.122 -08 000000051 INF: X Motor: Recv MA 9835\r\n>
17-02-28 20:05:53.122 -08 000000051 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:05:53.184 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:05:53.184 -08 000000046 INF: Y Motor: Start the move command
17-02-28 20:05:53.184 -08 000000046 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:53.250 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:05:53.250 -08 000000046 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:05:53.250 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:53.371 -08 000000046 INF: Y Motor: Unshifted Position: 1073240
17-02-28 20:05:53.421 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:53.545 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:53.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:53.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 36 of 40 seconds left===================
17-02-28 20:05:53.681 -08 000000046 INF: Y Motor: Unshifted Position: 1774640
17-02-28 20:05:53.731 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:53.747 -08 000000051 INF: X Motor: Xmit PR ER\n
17-02-28 20:05:53.808 -08 000000051 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:05:53.808 -08 000000051 INF: X Motor: Moved to 83.0112 after 686 ms
17-02-28 20:05:53.808 -08 000000051 INF: ======================================
17-02-28 20:05:53.859 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:53.996 -08 000000046 INF: Y Motor: Unshifted Position: 2563000
17-02-28 20:05:54.046 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:54.168 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:54.305 -08 000000046 INF: Y Motor: Unshifted Position: 3335435
17-02-28 20:05:54.355 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:54.482 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:54.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:54.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 35 of 40 seconds left===================
17-02-28 20:05:54.620 -08 000000046 INF: Y Motor: Unshifted Position: 4118842
17-02-28 20:05:54.670 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:54.792 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:54.929 -08 000000046 INF: Y Motor: Unshifted Position: 4897110
17-02-28 20:05:54.979 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:55.106 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:55.244 -08 000000046 INF: Y Motor: Unshifted Position: 5678224
17-02-28 20:05:55.294 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:55.416 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:55.553 -08 000000046 INF: Y Motor: Unshifted Position: 5953352
17-02-28 20:05:55.553 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:55.553 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:55.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:55.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 34 of 40 seconds left===================
17-02-28 20:05:55.618 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:05:55.618 -08 000000046 INF: Y Motor: Moved to 64.5335 after 2368 ms
17-02-28 20:05:55.618 -08 000000046 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:55.680 -08 000000046 INF: Y Motor: Recv v 4096\r
17-02-28 20:05:55.680 -08 000000046 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:55.680 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:55.742 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:05:55.742 -08 000000046 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:55.742 -08 000000046 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:55.804 -08 000000046 INF: Y Motor: Recv v 402653184\r
17-02-28 20:05:55.804 -08 000000046 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:05:55.804 -08 000000046 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:55.804 -08 000000046 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:55.866 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:05:55.866 -08 000000046 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:55.866 -08 000000046 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:55.866 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:55.928 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:05:55.928 -08 000000046 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:55.928 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:55.990 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:05:55.990 -08 000000046 INF: ======================================
17-02-28 20:05:55.991 -08 000000053 INF: ===================Move X,Y===================
17-02-28 20:05:55.993 -08 000000053 INF: ======================================
17-02-28 20:05:55.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:55.995 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:55.995 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:05:55.995 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:05:56.056 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:56.056 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:05:56.113 -08 000000099 INF: FPGA: Recv ZFREQCL
17-02-28 20:05:56.113 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:05:56.114 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:56.114 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:56.116 -08 000000101 INF: RunCopyService queue size at 2/28/2017 8:05:56 PM is 2
17-02-28 20:05:56.176 -08 000000062 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:05:56.176 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:05:56.176 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:56.177 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:56.178 -08 000000073 INF: ===================Set YMotor gains for scans===================
17-02-28 20:05:56.178 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:05:56.178 -08 000000073 INF: ======================================
17-02-28 20:05:56.179 -08 000000047 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:05:56.179 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:05:56.180 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:05:56.181 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:05:56.181 -08 000000047 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:05:56.241 -08 000000053 INF: FPGA: Recv TDIYPOS
17-02-28 20:05:56.241 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:05:56.243 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:05:56.243 -08 000000047 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:05:56.303 -08 000000033 INF: FPGA: Recv TDIYARM2
17-02-28 20:05:56.303 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:05:56.305 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:05:56.306 -08 000000047 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:05:56.306 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:05:56.308 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:05:56.308 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:05:56.309 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:56.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:56.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 33 of 40 seconds left===================
17-02-28 20:05:56.675 -08 000000047 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:05:56.675 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:05:56.675 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:56.690 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:05:56.692 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:57.070 -08 000000047 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:05:57.070 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:05:57.070 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:57.086 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:05:57.087 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:05:57.089 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:05:57.090 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:57.091 -08 000000047 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:05:57.091 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:57.093 -08 000000047 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:05:57.093 -08 000000047 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:05:57.093 -08 000000047 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:05:57.093 -08 000000047 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:05:57.114 -08 000000009 INF: FPGA: Recv ZYT 
17-02-28 20:05:57.114 -08 000000047 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:05:57.114 -08 000000047 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:05:57.175 -08 000000066 INF: FPGA: Recv ZARM
17-02-28 20:05:57.175 -08 000000047 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.5664 ms
17-02-28 20:05:57.175 -08 000000047 INF: Z Motor: ArmAbsStepped took 82.6929 ms
17-02-28 20:05:57.176 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:57.177 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:05:57.178 -08 000000047 INF: ======================================
17-02-28 20:05:57.179 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:57.180 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:57.180 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:57.181 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:57.182 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:57.182 -08 000000034 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:05:57.182 -08 000000046 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:05:57.182 -08 000000034 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:05:57.183 -08 000000034 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:05:57.183 -08 000000034 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:05:57.183 -08 000000046 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:05:57.183 -08 000000034 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:05:57.183 -08 000000046 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:05:57.183 -08 000000046 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:05:57.184 -08 000000046 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:05:57.551 -08 000000068 INF: FPGA: Recv EX2MV
17-02-28 20:05:57.551 -08 000000068 INF: FPGA: Recv EX1MV
17-02-28 20:05:57.551 -08 000000046 INF: Excitation Filter 1: Moved -107 steps in 368.2308 ms
17-02-28 20:05:57.551 -08 000000034 INF: Excitation Filter 2: Moved -107 steps in 368.4225 ms
17-02-28 20:05:57.551 -08 000000034 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.5209 ms
17-02-28 20:05:57.551 -08 000000034 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.6292 ms
17-02-28 20:05:57.551 -08 000000046 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.3699 ms
17-02-28 20:05:57.551 -08 000000046 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.746 ms
17-02-28 20:05:57.551 -08 000000034 INF: ======================================
17-02-28 20:05:57.552 -08 000000046 INF: ======================================
17-02-28 20:05:57.553 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:57.554 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:57.555 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:05:57.555 -08 000000077 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:57.555 -08 000000010 INF: ===================Serial===================
17-02-28 20:05:57.555 -08 000000077 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:05:57.555 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:57.555 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:57.556 -08 000000053 INF: ===================Camera TDI, Parallel===================
17-02-28 20:05:57.556 -08 000000080 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:57.556 -08 000000010 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:05:57.556 -08 000000010 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:05:57.557 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:05:57.557 -08 000000009 INF: ===================Camera TDI===================
17-02-28 20:05:57.557 -08 000000080 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:05:57.557 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:57.557 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:57.558 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:57.558 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:57.560 -08 000000080 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:05:57.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:57.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 32 of 40 seconds left===================
17-02-28 20:05:57.615 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:05:57.615 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:57.615 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:57.677 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:05:57.677 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:57.708 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:57.708 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:57.708 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:57.708 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:57.739 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:05:57.739 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:57.739 -08 000000077 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:05:57.739 -08 000000077 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:05:57.801 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:05:57.801 -08 000000077 INF: Y Motor: Start the move command
17-02-28 20:05:57.801 -08 000000077 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:57.858 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:57.858 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:57.858 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:57.858 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:57.863 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:05:57.863 -08 000000077 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:05:57.863 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:57.990 -08 000000077 INF: Y Motor: Unshifted Position: 5935230
17-02-28 20:05:58.008 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:58.008 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:58.008 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:58.008 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:58.040 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:58.158 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:05:58.158 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:05:58.158 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:05:58.158 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:05:58.158 -08 000000009 INF: ===================Camera #2 Frame #1===================
17-02-28 20:05:58.158 -08 000000047 INF: ===================Camera #0 Frame #1===================
17-02-28 20:05:58.165 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:58.300 -08 000000077 INF: Y Motor: Unshifted Position: 5888228
17-02-28 20:05:58.311 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:05:58.311 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:05:58.311 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:05:58.311 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:05:58.311 -08 000000047 INF: ===================Camera #0 Frame #3===================
17-02-28 20:05:58.311 -08 000000009 INF: ===================Camera #2 Frame #3===================
17-02-28 20:05:58.350 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:58.468 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:05:58.468 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:05:58.468 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:05:58.468 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:05:58.468 -08 000000009 INF: ===================Camera #2 Frame #4===================
17-02-28 20:05:58.468 -08 000000047 INF: ===================Camera #0 Frame #4===================
17-02-28 20:05:58.477 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:58.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:58.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 31 of 40 seconds left===================
17-02-28 20:05:58.614 -08 000000077 INF: Y Motor: Unshifted Position: 5841669
17-02-28 20:05:58.621 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:58.621 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:58.621 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:58.621 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:58.621 -08 000000009 INF: ===================Camera #2 Frame #5===================
17-02-28 20:05:58.621 -08 000000047 INF: ===================Camera #0 Frame #5===================
17-02-28 20:05:58.664 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:58.674 -08 000000004 INF: FPGA: Recv ZWAIT 
17-02-28 20:05:58.674 -08 000000004 INF: FPGA: Recv TDIYWAIT
17-02-28 20:05:58.674 -08 000000010 INF: ===================Serial===================
17-02-28 20:05:58.674 -08 000000080 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:58.676 -08 000000010 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:05:58.676 -08 000000080 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:05:58.676 -08 000000010 INF: ===================Serial===================
17-02-28 20:05:58.677 -08 000000096 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:05:58.677 -08 000000090 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:05:58.677 -08 000000096 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:05:58.677 -08 000000096 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:05:58.677 -08 000000096 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:05:58.677 -08 000000090 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:05:58.677 -08 000000096 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:05:58.677 -08 000000090 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:05:58.677 -08 000000090 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:05:58.677 -08 000000010 INF: ======================================
17-02-28 20:05:58.680 -08 000000090 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:05:58.774 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:05:58.774 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:05:58.774 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:05:58.774 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:05:58.774 -08 000000047 INF: ===================Camera #0 Frame #6===================
17-02-28 20:05:58.774 -08 000000009 INF: ===================Camera #2 Frame #6===================
17-02-28 20:05:58.777 -08 000000047 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:05:58.777 -08 000000009 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:05:58.778 -08 000000009 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:58.781 -08 000000047 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:58.788 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:58.816 -08 000000009 INF: Camera #2 ReleaseBuffer
17-02-28 20:05:58.816 -08 000000009 INF: ===================Camera TDI===================
17-02-28 20:05:58.817 -08 000000009 INF: ======================================
17-02-28 20:05:58.826 -08 000000047 INF: Camera #0 ReleaseBuffer
17-02-28 20:05:58.826 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:05:58.827 -08 000000047 INF: ======================================
17-02-28 20:05:58.828 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:05:58.830 -08 000000053 INF: ======================================
17-02-28 20:05:58.924 -08 000000077 INF: Y Motor: Unshifted Position: 5797059
17-02-28 20:05:58.974 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:59.049 -08 000000074 INF: FPGA: Recv EX1MV
17-02-28 20:05:59.049 -08 000000074 INF: FPGA: Recv EX2MV
17-02-28 20:05:59.049 -08 000000090 INF: Excitation Filter 2: Moved 107 steps in 371.4163 ms
17-02-28 20:05:59.049 -08 000000090 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.5549 ms
17-02-28 20:05:59.049 -08 000000090 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.6269 ms
17-02-28 20:05:59.049 -08 000000096 INF: Excitation Filter 1: Moved 107 steps in 371.6371 ms
17-02-28 20:05:59.049 -08 000000096 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.8447 ms
17-02-28 20:05:59.049 -08 000000096 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.9165 ms
17-02-28 20:05:59.049 -08 000000090 INF: ======================================
17-02-28 20:05:59.049 -08 000000096 INF: ======================================
17-02-28 20:05:59.051 -08 000000080 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:59.052 -08 000000080 INF: ======================================
17-02-28 20:05:59.113 -08 000000077 INF: Y Motor: Unshifted Position: 5797041
17-02-28 20:05:59.113 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:59.113 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:59.175 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:05:59.175 -08 000000077 INF: Y Motor: Moved to 62.9704 after 1312 ms
17-02-28 20:05:59.175 -08 000000077 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:59.237 -08 000000077 INF: Y Motor: Recv v 4097\r
17-02-28 20:05:59.237 -08 000000077 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:59.237 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:59.299 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:05:59.299 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:59.299 -08 000000077 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:59.361 -08 000000077 INF: Y Motor: Recv v 134217728\r
17-02-28 20:05:59.361 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:05:59.361 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:59.361 -08 000000077 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:59.423 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:05:59.423 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:59.423 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:59.423 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:59.485 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:05:59.485 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:59.485 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:59.550 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:05:59.550 -08 000000077 INF: ======================================
17-02-28 20:05:59.551 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:59.552 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:59.553 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:59.553 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:05:59.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:59.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 30 of 40 seconds left===================
17-02-28 20:05:59.611 -08 000000069 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:05:59.611 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:59.673 -08 000000054 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:05:59.673 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:05:59.735 -08 000000047 INF: FPGA: Recv ZADCR 2423
17-02-28 20:05:59.735 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:05:59.735 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:05:59.797 -08 000000004 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:05:59.797 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:05:59.797 -08 000000042 INF: TDIScan finished after 6853.6212 ms
17-02-28 20:05:59.797 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:05:59.797 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:05:59.798 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:05:59.859 -08 000000077 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:05:59.860 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:59.860 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:59.861 -08 000000069 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:05:59.861 -08 000000010 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:05:59.861 -08 000000068 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:05:59.861 -08 000000069 INF: ======================================
17-02-28 20:05:59.861 -08 000000068 INF: ======================================
17-02-28 20:05:59.862 -08 000000010 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:59.862 -08 000000010 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:59.923 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:05:59.923 -08 000000010 INF: ======================================
17-02-28 20:05:59.924 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:59.925 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:59.926 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:05:59.981 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:59.981 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:06:00.020 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:00.020 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:06:00.087 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:00.087 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:06:00.117 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:00.117 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:06:00.117 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:06:00.118 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:06:00.126 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:06:00.127 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:06:00.127 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:06:00.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:00.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 29 of 40 seconds left===================
17-02-28 20:06:00.814 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:06:00.837 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0892760272757231Best Z position at top surface = -0.160950847930239Best Z position at top surface + compensator offset = -0.138250847930239 C:2,L:6,T
17-02-28 20:06:00.837 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.160950847930239
17-02-28 20:06:00.838 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.98141
17-02-28 20:06:00.838 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0892760272757231
17-02-28 20:06:00.838 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.63642
17-02-28 20:06:00.838 -08 000000042 INF: Z-height at LaneTopSurface is -0.160950847930239.
17-02-28 20:06:00.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:06:00.974 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:06:00.974 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:06:00.982 -08 000000081 INF: FPGA: Recv ZSTEP 
17-02-28 20:06:00.982 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:06:00.983 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:06:00.984 -08 000000042 INF: Lane 6, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:06:00.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:06:00.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:06:00.985 -08 000000033 INF: ===================Move Tilt Motor 1===================
17-02-28 20:06:00.985 -08 000000100 INF: ===================Move Tilt Motor 2===================
17-02-28 20:06:00.985 -08 000000037 INF: ===================Move Tilt Motor 3===================
17-02-28 20:06:00.985 -08 000000033 INF: ======================================
17-02-28 20:06:00.986 -08 000000100 INF: ======================================
17-02-28 20:06:00.986 -08 000000037 INF: ======================================
17-02-28 20:06:00.986 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:06:00.987 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:06:00.988 -08 000000042 INF: ETF Best Z: -0.1382508 mm (36241 DAC)
17-02-28 20:06:00.988 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:06:00.989 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:06:00.989 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:06:00.989 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:06:01.413 -08 000000096 INF: FPGA: Recv MIOCOMPF
17-02-28 20:06:01.413 -08 000000042 INF: Compensator: Moved IntoPath in 424 ms
17-02-28 20:06:01.414 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:06:01.415 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:06:01.421 -08 000000042 INF: Swath 1 position calculated to be: {X=82.45663, Y=39.76308} from estimated center X= 82.97199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:06:01.421 -08 000000042 INF: Swath 2 position calculated to be: {X=83.56464, Y=39.76308} from estimated center X= 82.97199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:06:01.427 -08 000000042 INF: Swath 0: Converted transform from (-45.10192, -3.493628) pixels to (-0.015525, -0.001035) mm.
17-02-28 20:06:01.433 -08 000000042 INF: Swath 1: Converted transform from (-70.4561, -3.232944) pixels to (-0.02415, -0.001035) mm.
17-02-28 20:06:01.433 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308===================
17-02-28 20:06:01.434 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308===================
17-02-28 20:06:01.434 -08 000000042 INF: Transformed XStagePosition from 82.45663 mm to 82.4411095213145 mm.
17-02-28 20:06:01.446 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.552054355504 mm.
17-02-28 20:06:01.446 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.352054355504 mm.
17-02-28 20:06:01.446 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.442804355504 mm.
17-02-28 20:06:01.448 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:01.448 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:06:01.448 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:01.449 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = F_1
17-02-28 20:06:01.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:01.456 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:01.456 -08 000000058 INF: ===================MoveEmissionFilters===================
17-02-28 20:06:01.456 -08 000000062 INF: ===================Move X,Y===================
17-02-28 20:06:01.457 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:06:01.457 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:06:01.457 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:06:01.457 -08 000000046 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:06:01.457 -08 000000027 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:06:01.458 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:06:01.458 -08 000000062 INF: ===================Move X,Y, Parallel===================
17-02-28 20:06:01.458 -08 000000081 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:06:01.458 -08 000000081 INF: Z Motor: Moving to -0.1583 mm, started at -0.0100 mm
17-02-28 20:06:01.458 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:06:01.458 -08 000000081 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:06:01.458 -08 000000046 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:06:01.458 -08 000000027 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:06:01.458 -08 000000020 INF: ===================Move X Motor without settling===================
17-02-28 20:06:01.458 -08 000000093 INF: ===================Move Y Motor without settling===================
17-02-28 20:06:01.459 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:06:01.459 -08 000000020 INF: X Motor: Xmit PR VM\n
17-02-28 20:06:01.459 -08 000000083 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:06:01.459 -08 000000033 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:06:01.459 -08 000000100 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:06:01.459 -08 000000033 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:06:01.459 -08 000000037 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:06:01.459 -08 000000078 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:06:01.459 -08 000000088 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:06:01.459 -08 000000083 INF: ======================================
17-02-28 20:06:01.459 -08 000000059 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:06:01.459 -08 000000101 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:06:01.460 -08 000000078 INF: ======================================
17-02-28 20:06:01.460 -08 000000088 INF: ======================================
17-02-28 20:06:01.460 -08 000000101 INF: ======================================
17-02-28 20:06:01.460 -08 000000037 INF: ======================================
17-02-28 20:06:01.461 -08 000000059 INF: ======================================
17-02-28 20:06:01.461 -08 000000027 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:06:01.461 -08 000000093 INF: Y Motor: Moving to 64.5521 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:06:01.462 -08 000000093 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:06:01.462 -08 000000093 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:01.462 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:06:01.462 -08 000000027 INF: ======================================
17-02-28 20:06:01.462 -08 000000100 INF: ======================================
17-02-28 20:06:01.463 -08 000000033 INF: ======================================
17-02-28 20:06:01.463 -08 000000010 INF: ======================================
17-02-28 20:06:01.464 -08 000000046 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:06:01.464 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:06:01.465 -08 000000046 INF: ======================================
17-02-28 20:06:01.465 -08 000000047 INF: ======================================
17-02-28 20:06:01.466 -08 000000053 INF: FPGA: Recv ZTRG 
17-02-28 20:06:01.466 -08 000000081 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:06:01.466 -08 000000058 INF: ======================================
17-02-28 20:06:01.528 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:06:01.528 -08 000000081 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:06:01.528 -08 000000081 INF: FPGA: Xmit ZMV 41484\n
17-02-28 20:06:01.530 -08 000000020 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:06:01.530 -08 000000020 INF: X Motor: Xmit PR VI\n
17-02-28 20:06:01.530 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:06:01.530 -08 000000093 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:06:01.530 -08 000000093 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:01.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:01.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 28 of 40 seconds left===================
17-02-28 20:06:01.592 -08 000000064 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:06:01.592 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:06:01.594 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:06:01.594 -08 000000093 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:01.594 -08 000000020 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:06:01.594 -08 000000020 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:06:01.594 -08 000000020 INF: X Motor: Moving to 82.4411 mm @15.000 mm/sec, started at 83.0112 mm
17-02-28 20:06:01.594 -08 000000020 INF: X Motor: Xmit MA 9601\n
17-02-28 20:06:01.654 -08 000000020 INF: X Motor: Recv MA 9601\r\n>
17-02-28 20:06:01.654 -08 000000093 INF: Y Motor: Recv v 0\r
17-02-28 20:06:01.654 -08 000000093 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:01.654 -08 000000020 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:06:01.654 -08 000000093 INF: Y Motor: Set target position to 5955205 encoder counts
17-02-28 20:06:01.654 -08 000000093 INF: Y Motor: Xmit s r0xca 5955205\r
17-02-28 20:06:01.714 -08 000000064 INF: FPGA: Recv ZMV 
17-02-28 20:06:01.714 -08 000000081 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.989 ms
17-02-28 20:06:01.714 -08 000000081 INF: FPGA: Xmit ZDACR\n
17-02-28 20:06:01.716 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:06:01.716 -08 000000093 INF: Y Motor: Start the move command
17-02-28 20:06:01.716 -08 000000093 INF: Y Motor: Xmit t 1\r
17-02-28 20:06:01.776 -08 000000004 INF: FPGA: Recv ZDACR 41484
17-02-28 20:06:01.776 -08 000000081 INF: Z Motor: MoveAndTrigger took 318.1671 ms w/comms
17-02-28 20:06:01.776 -08 000000081 INF: Z Motor: After move to -0.1583, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:06:01.776 -08 000000081 INF: Z Motor: MoveAbsStepped took 318.3184 ms
17-02-28 20:06:01.776 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:06:01.778 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:06:01.778 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:06:01.778 -08 000000093 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:06:01.778 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:01.778 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:06:01.779 -08 000000096 INF: ===================Camera Arm TDI===================
17-02-28 20:06:01.779 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:01.779 -08 000000096 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:06:01.780 -08 000000051 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:06:01.780 -08 000000096 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:06:01.780 -08 000000051 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:06:01.781 -08 000000051 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:06:01.841 -08 000000080 INF: FPGA: Recv ZSEL 
17-02-28 20:06:01.842 -08 000000051 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:06:01.842 -08 000000051 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:06:01.903 -08 000000068 INF: FPGA: Recv TDIBB
17-02-28 20:06:01.903 -08 000000051 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:06:01.904 -08 000000051 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:06:01.905 -08 000000093 INF: Y Motor: Unshifted Position: 5882237
17-02-28 20:06:01.905 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:01.906 -08 000000051 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:06:01.906 -08 000000051 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:06:01.906 -08 000000051 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:06:01.955 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:01.965 -08 000000077 INF: FPGA: Recv ZSTEP 
17-02-28 20:06:01.965 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:01.967 -08 000000051 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:06:01.967 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:01.969 -08 000000051 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:06:01.969 -08 000000051 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:06:01.969 -08 000000051 INF: Z Motor: Arming to move to -0.1182 mm
17-02-28 20:06:01.969 -08 000000051 INF: FPGA: Xmit ZYT 6435205 4\n
17-02-28 20:06:02.027 -08 000000100 INF: FPGA: Recv ZYT 
17-02-28 20:06:02.027 -08 000000051 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6382237 enc / 63.822 mm / ) = 6435205 enc / 64.352 mm
17-02-28 20:06:02.027 -08 000000051 INF: FPGA: Xmit ZARM 30998\n
17-02-28 20:06:02.079 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:02.089 -08 000000092 INF: FPGA: Recv ZARM
17-02-28 20:06:02.089 -08 000000051 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9823 ms
17-02-28 20:06:02.089 -08 000000051 INF: Z Motor: ArmAbsStepped took 120.0382 ms
17-02-28 20:06:02.089 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:02.091 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:06:02.091 -08 000000020 INF: X Motor: Xmit PR ER\n
17-02-28 20:06:02.092 -08 000000051 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:06:02.093 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:06:02.094 -08 000000051 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:06:02.094 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:06:02.096 -08 000000051 INF: ======================================
17-02-28 20:06:02.153 -08 000000020 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:06:02.153 -08 000000020 INF: X Motor: Moved to 82.4399 after 498 ms
17-02-28 20:06:02.153 -08 000000020 INF: ======================================
17-02-28 20:06:02.215 -08 000000093 INF: Y Motor: Unshifted Position: 5955206
17-02-28 20:06:02.215 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:06:02.215 -08 000000093 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:02.280 -08 000000093 INF: Y Motor: Recv v 0\r
17-02-28 20:06:02.280 -08 000000093 INF: Y Motor: Moved to 64.5521 after 501 ms
17-02-28 20:06:02.280 -08 000000093 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:06:02.342 -08 000000093 INF: Y Motor: Recv v 4096\r
17-02-28 20:06:02.342 -08 000000093 INF: Y Motor: Status After move finished OK:
17-02-28 20:06:02.342 -08 000000093 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:02.404 -08 000000093 INF: Y Motor: Recv v 0\r
17-02-28 20:06:02.404 -08 000000093 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:02.404 -08 000000093 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:06:02.466 -08 000000093 INF: Y Motor: Recv v 402653184\r
17-02-28 20:06:02.466 -08 000000093 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:06:02.466 -08 000000093 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:06:02.466 -08 000000093 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:06:02.528 -08 000000093 INF: Y Motor: Recv v 0\r
17-02-28 20:06:02.528 -08 000000093 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:06:02.528 -08 000000093 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:06:02.528 -08 000000093 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:02.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:02.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 27 of 40 seconds left===================
17-02-28 20:06:02.590 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:06:02.590 -08 000000093 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:06:02.590 -08 000000093 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:02.652 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:06:02.652 -08 000000093 INF: ======================================
17-02-28 20:06:02.653 -08 000000062 INF: ===================Move X,Y===================
17-02-28 20:06:02.654 -08 000000062 INF: ======================================
17-02-28 20:06:02.755 -08 000000096 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:06:02.755 -08 000000096 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:06:02.755 -08 000000096 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:06:02.770 -08 000000096 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:06:02.772 -08 000000096 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:06:03.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:03.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 26 of 40 seconds left===================
17-02-28 20:06:03.782 -08 000000096 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:06:03.782 -08 000000096 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:06:03.782 -08 000000096 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:06:03.797 -08 000000096 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:06:03.799 -08 000000096 INF: ===================Camera Arm TDI===================
17-02-28 20:06:03.800 -08 000000096 INF: ======================================
17-02-28 20:06:03.801 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:06:03.802 -08 000000081 INF: ======================================
17-02-28 20:06:03.803 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:03.804 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:03.804 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:06:03.804 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:06:03.839 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:06:03.839 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:06:03.899 -08 000000046 INF: FPGA: Recv ZFREQCL
17-02-28 20:06:03.899 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:06:03.899 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:03.899 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:06:03.961 -08 000000069 INF: FPGA: Recv TDIYERD 6455206
17-02-28 20:06:03.961 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455206 counts (64.552 mm)
17-02-28 20:06:03.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:03.962 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:03.962 -08 000000096 INF: ===================TDI FPGA Arm===================
17-02-28 20:06:03.962 -08 000000068 INF: ===================Set YMotor gains for scans===================
17-02-28 20:06:03.963 -08 000000068 INF: ======================================
17-02-28 20:06:03.963 -08 000000096 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:06:03.964 -08 000000096 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:06:03.964 -08 000000096 INF: FPGA: Xmit TDIYPOS 6344280\n
17-02-28 20:06:04.023 -08 000000027 INF: FPGA: Recv TDIYPOS
17-02-28 20:06:04.023 -08 000000096 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:06:04.024 -08 000000096 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:06:04.025 -08 000000096 INF: FPGA: Xmit TDIYARM3 139264 6435205 1 1\n
17-02-28 20:06:04.085 -08 000000009 INF: FPGA: Recv TDIYARM3
17-02-28 20:06:04.085 -08 000000096 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:06:04.086 -08 000000096 INF: ===================TDI FPGA Arm===================
17-02-28 20:06:04.087 -08 000000096 INF: ======================================
17-02-28 20:06:04.088 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:04.089 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:04.089 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:04.089 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:04.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:04.091 -08 000000044 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:06:04.091 -08 000000073 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:06:04.091 -08 000000044 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:06:04.091 -08 000000044 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:06:04.091 -08 000000044 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:06:04.091 -08 000000044 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:06:04.091 -08 000000073 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:06:04.091 -08 000000073 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:06:04.091 -08 000000073 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:06:04.092 -08 000000073 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:06:04.460 -08 000000081 INF: FPGA: Recv EX2MV
17-02-28 20:06:04.460 -08 000000081 INF: FPGA: Recv EX1MV
17-02-28 20:06:04.460 -08 000000073 INF: Excitation Filter 1: Moved -107 steps in 368.6962 ms
17-02-28 20:06:04.460 -08 000000073 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.7935 ms
17-02-28 20:06:04.460 -08 000000073 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.871 ms
17-02-28 20:06:04.460 -08 000000044 INF: Excitation Filter 2: Moved -107 steps in 368.9064 ms
17-02-28 20:06:04.460 -08 000000044 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.0919 ms
17-02-28 20:06:04.460 -08 000000044 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.1626 ms
17-02-28 20:06:04.460 -08 000000073 INF: ======================================
17-02-28 20:06:04.460 -08 000000044 INF: ======================================
17-02-28 20:06:04.461 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:04.463 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:04.463 -08 000000009 INF: ===================Camera TDI===================
17-02-28 20:06:04.463 -08 000000037 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:04.463 -08 000000064 INF: ===================FPGA Z Wait===================
17-02-28 20:06:04.463 -08 000000053 INF: ===================Move Y Motor without settling===================
17-02-28 20:06:04.464 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:06:04.464 -08 000000053 INF: Y Motor: Moving to 14.9037 mm @6.500 mm/sec, started at 64.5521 mm
17-02-28 20:06:04.464 -08 000000053 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:06:04.464 -08 000000053 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:04.464 -08 000000009 INF: ===================Camera TDI, Parallel===================
17-02-28 20:06:04.464 -08 000000037 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:06:04.465 -08 000000099 INF: ===================Camera TDI===================
17-02-28 20:06:04.465 -08 000000046 INF: ===================Camera TDI===================
17-02-28 20:06:04.465 -08 000000037 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:06:04.466 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:04.466 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:04.467 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:04.467 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:04.524 -08 000000053 INF: Y Motor: Recv ok\r
17-02-28 20:06:04.524 -08 000000053 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:06:04.524 -08 000000053 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:04.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:04.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 25 of 40 seconds left===================
17-02-28 20:06:04.589 -08 000000053 INF: Y Motor: Recv ok\r
17-02-28 20:06:04.589 -08 000000053 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:04.616 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:04.616 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:04.617 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:04.617 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:04.651 -08 000000053 INF: Y Motor: Recv v 0\r
17-02-28 20:06:04.651 -08 000000053 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:04.651 -08 000000053 INF: Y Motor: Set target position to 990372 encoder counts
17-02-28 20:06:04.651 -08 000000053 INF: Y Motor: Xmit s r0xca 990372\r
17-02-28 20:06:04.713 -08 000000053 INF: Y Motor: Recv ok\r
17-02-28 20:06:04.713 -08 000000053 INF: Y Motor: Start the move command
17-02-28 20:06:04.713 -08 000000053 INF: Y Motor: Xmit t 1\r
17-02-28 20:06:04.766 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:04.766 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:04.767 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:04.767 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:04.775 -08 000000053 INF: Y Motor: Recv ok\r
17-02-28 20:06:04.775 -08 000000053 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:06:04.775 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:04.836 -08 000000044 INF: FPGA: Recv ZWAIT 
17-02-28 20:06:04.836 -08 000000064 INF: ======================================
17-02-28 20:06:04.899 -08 000000053 INF: Y Motor: Unshifted Position: 5892052
17-02-28 20:06:04.916 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:06:04.916 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:06:04.916 -08 000000099 INF: ===================Camera #0 Frame #4===================
17-02-28 20:06:04.917 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:06:04.917 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:06:04.917 -08 000000046 INF: ===================Camera #2 Frame #4===================
17-02-28 20:06:04.949 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:05.073 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:05.078 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:06:05.078 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:06:05.078 -08 000000099 INF: ===================Camera #0 Frame #10===================
17-02-28 20:06:05.079 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:06:05.079 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:06:05.079 -08 000000046 INF: ===================Camera #2 Frame #10===================
17-02-28 20:06:05.212 -08 000000053 INF: Y Motor: Unshifted Position: 5689902
17-02-28 20:06:05.248 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:06:05.248 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:06:05.248 -08 000000099 INF: ===================Camera #0 Frame #17===================
17-02-28 20:06:05.250 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:06:05.250 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:06:05.250 -08 000000046 INF: ===================Camera #2 Frame #17===================
17-02-28 20:06:05.262 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:05.386 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:05.421 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:06:05.421 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:06:05.421 -08 000000099 INF: ===================Camera #0 Frame #23===================
17-02-28 20:06:05.424 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:06:05.424 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:06:05.424 -08 000000046 INF: ===================Camera #2 Frame #23===================
17-02-28 20:06:05.522 -08 000000053 INF: Y Motor: Unshifted Position: 5488195
17-02-28 20:06:05.572 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:05.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:05.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 24 of 40 seconds left===================
17-02-28 20:06:05.591 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:06:05.591 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:06:05.591 -08 000000099 INF: ===================Camera #0 Frame #29===================
17-02-28 20:06:05.595 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:06:05.595 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:06:05.595 -08 000000046 INF: ===================Camera #2 Frame #29===================
17-02-28 20:06:05.697 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:05.761 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:06:05.761 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:06:05.761 -08 000000099 INF: ===================Camera #0 Frame #36===================
17-02-28 20:06:05.766 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:06:05.766 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:06:05.766 -08 000000046 INF: ===================Camera #2 Frame #36===================
17-02-28 20:06:05.836 -08 000000053 INF: Y Motor: Unshifted Position: 5284090
17-02-28 20:06:05.886 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:05.934 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:06:05.934 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:06:05.934 -08 000000099 INF: ===================Camera #0 Frame #42===================
17-02-28 20:06:05.940 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:06:05.940 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:06:05.940 -08 000000046 INF: ===================Camera #2 Frame #42===================
17-02-28 20:06:06.010 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:06.104 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:06:06.104 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:06:06.104 -08 000000099 INF: ===================Camera #0 Frame #48===================
17-02-28 20:06:06.110 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:06:06.110 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:06:06.110 -08 000000046 INF: ===================Camera #2 Frame #48===================
17-02-28 20:06:06.146 -08 000000053 INF: Y Motor: Unshifted Position: 5081067
17-02-28 20:06:06.197 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:06.275 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:06:06.275 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:06:06.275 -08 000000099 INF: ===================Camera #0 Frame #54===================
17-02-28 20:06:06.281 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:06:06.281 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:06:06.281 -08 000000046 INF: ===================Camera #2 Frame #55===================
17-02-28 20:06:06.324 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:06.445 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:06:06.445 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:06:06.445 -08 000000099 INF: ===================Camera #0 Frame #61===================
17-02-28 20:06:06.455 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:06:06.455 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:06:06.455 -08 000000046 INF: ===================Camera #2 Frame #61===================
17-02-28 20:06:06.462 -08 000000053 INF: Y Motor: Unshifted Position: 4878921
17-02-28 20:06:06.512 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:06.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:06.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 23 of 40 seconds left===================
17-02-28 20:06:06.617 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:06:06.617 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:06:06.617 -08 000000099 INF: ===================Camera #0 Frame #67===================
17-02-28 20:06:06.625 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:06:06.625 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:06:06.625 -08 000000046 INF: ===================Camera #2 Frame #67===================
17-02-28 20:06:06.634 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:06.773 -08 000000053 INF: Y Motor: Unshifted Position: 4675254
17-02-28 20:06:06.787 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:06:06.787 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:06:06.787 -08 000000099 INF: ===================Camera #0 Frame #73===================
17-02-28 20:06:06.795 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:06:06.795 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:06:06.795 -08 000000046 INF: ===================Camera #2 Frame #74===================
17-02-28 20:06:06.823 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:06.947 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:06.957 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:06:06.957 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:06:06.957 -08 000000099 INF: ===================Camera #0 Frame #80===================
17-02-28 20:06:06.969 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:06:06.969 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:06:06.969 -08 000000046 INF: ===================Camera #2 Frame #80===================
17-02-28 20:06:07.083 -08 000000053 INF: Y Motor: Unshifted Position: 4473524
17-02-28 20:06:07.129 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:06:07.129 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:06:07.129 -08 000000099 INF: ===================Camera #0 Frame #86===================
17-02-28 20:06:07.133 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:07.139 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:06:07.139 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:06:07.139 -08 000000046 INF: ===================Camera #2 Frame #86===================
17-02-28 20:06:07.261 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:07.298 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:06:07.298 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:06:07.298 -08 000000099 INF: ===================Camera #0 Frame #92===================
17-02-28 20:06:07.308 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:06:07.308 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:06:07.308 -08 000000046 INF: ===================Camera #2 Frame #92===================
17-02-28 20:06:07.396 -08 000000053 INF: Y Motor: Unshifted Position: 4270079
17-02-28 20:06:07.446 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:07.467 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:06:07.467 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:06:07.467 -08 000000099 INF: ===================Camera #0 Frame #98===================
17-02-28 20:06:07.477 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:06:07.477 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:06:07.477 -08 000000046 INF: ===================Camera #2 Frame #99===================
17-02-28 20:06:07.571 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:07.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:07.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 22 of 40 seconds left===================
17-02-28 20:06:07.636 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:06:07.636 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:06:07.636 -08 000000099 INF: ===================Camera #0 Frame #105===================
17-02-28 20:06:07.650 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:06:07.650 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:06:07.650 -08 000000046 INF: ===================Camera #2 Frame #105===================
17-02-28 20:06:07.708 -08 000000053 INF: Y Motor: Unshifted Position: 4066406
17-02-28 20:06:07.758 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:07.808 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:06:07.808 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:06:07.808 -08 000000099 INF: ===================Camera #0 Frame #111===================
17-02-28 20:06:07.878 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:06:07.878 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:06:07.879 -08 000000046 INF: ===================Camera #2 Frame #113===================
17-02-28 20:06:07.930 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:08.039 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:06:08.039 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:06:08.039 -08 000000099 INF: ===================Camera #0 Frame #119===================
17-02-28 20:06:08.056 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:06:08.056 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:06:08.056 -08 000000046 INF: ===================Camera #2 Frame #120===================
17-02-28 20:06:08.066 -08 000000053 INF: Y Motor: Unshifted Position: 3834363
17-02-28 20:06:08.116 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:08.216 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:06:08.216 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:06:08.216 -08 000000099 INF: ===================Camera #0 Frame #126===================
17-02-28 20:06:08.230 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:06:08.230 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:06:08.230 -08 000000046 INF: ===================Camera #2 Frame #126===================
17-02-28 20:06:08.243 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:08.379 -08 000000053 INF: Y Motor: Unshifted Position: 3630686
17-02-28 20:06:08.389 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:06:08.389 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:06:08.389 -08 000000099 INF: ===================Camera #0 Frame #132===================
17-02-28 20:06:08.401 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:06:08.401 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:06:08.401 -08 000000046 INF: ===================Camera #2 Frame #133===================
17-02-28 20:06:08.429 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:08.553 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:08.558 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:06:08.558 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:06:08.558 -08 000000099 INF: ===================Camera #0 Frame #139===================
17-02-28 20:06:08.574 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:06:08.574 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:06:08.574 -08 000000046 INF: ===================Camera #2 Frame #139===================
17-02-28 20:06:08.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:08.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 21 of 40 seconds left===================
17-02-28 20:06:08.690 -08 000000053 INF: Y Motor: Unshifted Position: 3427236
17-02-28 20:06:08.731 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:06:08.731 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:06:08.731 -08 000000099 INF: ===================Camera #0 Frame #145===================
17-02-28 20:06:08.740 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:08.744 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:06:08.744 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:06:08.744 -08 000000046 INF: ===================Camera #2 Frame #145===================
17-02-28 20:06:08.867 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:08.900 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:06:08.900 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:06:08.900 -08 000000099 INF: ===================Camera #0 Frame #151===================
17-02-28 20:06:08.914 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:06:08.914 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:06:08.914 -08 000000046 INF: ===================Camera #2 Frame #152===================
17-02-28 20:06:09.003 -08 000000053 INF: Y Motor: Unshifted Position: 3224869
17-02-28 20:06:09.053 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:09.069 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:06:09.069 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:06:09.069 -08 000000099 INF: ===================Camera #0 Frame #157===================
17-02-28 20:06:09.088 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:06:09.088 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:06:09.088 -08 000000046 INF: ===================Camera #2 Frame #158===================
17-02-28 20:06:09.177 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:09.239 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:06:09.239 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:06:09.239 -08 000000099 INF: ===================Camera #0 Frame #164===================
17-02-28 20:06:09.259 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:06:09.259 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:06:09.259 -08 000000046 INF: ===================Camera #2 Frame #164===================
17-02-28 20:06:09.317 -08 000000053 INF: Y Motor: Unshifted Position: 3023375
17-02-28 20:06:09.367 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:09.412 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:06:09.412 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:06:09.412 -08 000000099 INF: ===================Camera #0 Frame #170===================
17-02-28 20:06:09.430 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:06:09.430 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:06:09.430 -08 000000046 INF: ===================Camera #2 Frame #171===================
17-02-28 20:06:09.491 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:09.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:09.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 20 of 40 seconds left===================
17-02-28 20:06:09.582 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:06:09.582 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:06:09.582 -08 000000099 INF: ===================Camera #0 Frame #176===================
17-02-28 20:06:09.604 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:06:09.604 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:06:09.604 -08 000000046 INF: ===================Camera #2 Frame #177===================
17-02-28 20:06:09.627 -08 000000053 INF: Y Motor: Unshifted Position: 2819054
17-02-28 20:06:09.677 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:09.752 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:06:09.752 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:06:09.752 -08 000000099 INF: ===================Camera #0 Frame #182===================
17-02-28 20:06:09.775 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:06:09.775 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:06:09.775 -08 000000046 INF: ===================Camera #2 Frame #183===================
17-02-28 20:06:09.803 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:09.922 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:06:09.922 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:06:09.922 -08 000000099 INF: ===================Camera #0 Frame #189===================
17-02-28 20:06:09.941 -08 000000053 INF: Y Motor: Unshifted Position: 2616261
17-02-28 20:06:09.946 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:06:09.946 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:06:09.946 -08 000000046 INF: ===================Camera #2 Frame #190===================
17-02-28 20:06:09.991 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:10.096 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:06:10.096 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:06:10.096 -08 000000099 INF: ===================Camera #0 Frame #195===================
17-02-28 20:06:10.115 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:10.120 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:06:10.120 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:06:10.120 -08 000000046 INF: ===================Camera #2 Frame #196===================
17-02-28 20:06:10.251 -08 000000053 INF: Y Motor: Unshifted Position: 2413256
17-02-28 20:06:10.264 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:06:10.264 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:06:10.264 -08 000000099 INF: ===================Camera #0 Frame #201===================
17-02-28 20:06:10.291 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:06:10.291 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:06:10.291 -08 000000046 INF: ===================Camera #2 Frame #202===================
17-02-28 20:06:10.301 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:10.425 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:10.434 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:06:10.434 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:06:10.434 -08 000000099 INF: ===================Camera #0 Frame #208===================
17-02-28 20:06:10.462 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209.
17-02-28 20:06:10.462 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209
17-02-28 20:06:10.462 -08 000000046 INF: ===================Camera #2 Frame #209===================
17-02-28 20:06:10.565 -08 000000053 INF: Y Motor: Unshifted Position: 2211750
17-02-28 20:06:10.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:10.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 19 of 40 seconds left===================
17-02-28 20:06:10.607 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:06:10.607 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:06:10.607 -08 000000099 INF: ===================Camera #0 Frame #214===================
17-02-28 20:06:10.615 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:10.636 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:06:10.636 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:06:10.636 -08 000000046 INF: ===================Camera #2 Frame #215===================
17-02-28 20:06:10.740 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:10.777 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:06:10.777 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:06:10.777 -08 000000099 INF: ===================Camera #0 Frame #220===================
17-02-28 20:06:10.807 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:06:10.807 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:06:10.807 -08 000000046 INF: ===================Camera #2 Frame #221===================
17-02-28 20:06:10.877 -08 000000053 INF: Y Motor: Unshifted Position: 2008739
17-02-28 20:06:10.927 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:10.947 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:06:10.947 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:06:10.947 -08 000000099 INF: ===================Camera #0 Frame #226===================
17-02-28 20:06:10.978 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-02-28 20:06:10.978 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-02-28 20:06:10.978 -08 000000046 INF: ===================Camera #2 Frame #228===================
17-02-28 20:06:11.053 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:11.117 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:06:11.117 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:06:11.117 -08 000000099 INF: ===================Camera #0 Frame #233===================
17-02-28 20:06:11.152 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-02-28 20:06:11.152 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-02-28 20:06:11.152 -08 000000046 INF: ===================Camera #2 Frame #234===================
17-02-28 20:06:11.187 -08 000000053 INF: Y Motor: Unshifted Position: 1803337
17-02-28 20:06:11.237 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:11.290 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:06:11.290 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:06:11.290 -08 000000099 INF: ===================Camera #0 Frame #239===================
17-02-28 20:06:11.323 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:06:11.323 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:06:11.323 -08 000000046 INF: ===================Camera #2 Frame #240===================
17-02-28 20:06:11.361 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:11.460 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:06:11.460 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:06:11.460 -08 000000099 INF: ===================Camera #0 Frame #245===================
17-02-28 20:06:11.494 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247.
17-02-28 20:06:11.494 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247
17-02-28 20:06:11.494 -08 000000046 INF: ===================Camera #2 Frame #247===================
17-02-28 20:06:11.501 -08 000000053 INF: Y Motor: Unshifted Position: 1602925
17-02-28 20:06:11.551 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:11.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:11.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 18 of 40 seconds left===================
17-02-28 20:06:11.630 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:06:11.630 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:06:11.630 -08 000000099 INF: ===================Camera #0 Frame #252===================
17-02-28 20:06:11.668 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-02-28 20:06:11.668 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-02-28 20:06:11.668 -08 000000046 INF: ===================Camera #2 Frame #253===================
17-02-28 20:06:11.675 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:11.803 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:06:11.803 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:06:11.803 -08 000000099 INF: ===================Camera #0 Frame #258===================
17-02-28 20:06:11.813 -08 000000053 INF: Y Motor: Unshifted Position: 1400123
17-02-28 20:06:11.839 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:06:11.839 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:06:11.839 -08 000000046 INF: ===================Camera #2 Frame #259===================
17-02-28 20:06:11.863 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:11.972 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:06:11.972 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:06:11.972 -08 000000099 INF: ===================Camera #0 Frame #264===================
17-02-28 20:06:11.987 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:12.010 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266.
17-02-28 20:06:12.010 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266
17-02-28 20:06:12.010 -08 000000046 INF: ===================Camera #2 Frame #266===================
17-02-28 20:06:12.123 -08 000000053 INF: Y Motor: Unshifted Position: 1195796
17-02-28 20:06:12.142 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:06:12.142 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:06:12.142 -08 000000099 INF: ===================Camera #0 Frame #270===================
17-02-28 20:06:12.173 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:12.183 -08 000000083 INF: FPGA: Recv TDIYWAIT
17-02-28 20:06:12.183 -08 000000037 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:12.184 -08 000000046 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:06:12.184 -08 000000046 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:06:12.184 -08 000000046 INF: ===================Camera #2 Frame #272===================
17-02-28 20:06:12.185 -08 000000037 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:06:12.186 -08 000000088 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:06:12.186 -08 000000033 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:06:12.186 -08 000000088 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:06:12.186 -08 000000088 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:06:12.186 -08 000000088 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:06:12.186 -08 000000033 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:06:12.186 -08 000000088 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:06:12.186 -08 000000033 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:06:12.186 -08 000000033 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:06:12.187 -08 000000033 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:06:12.205 -08 000000046 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:06:12.206 -08 000000046 INF: ===================CameraTDI Cleanup===================
17-02-28 20:06:12.297 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:12.404 -08 000000046 INF: Camera #2 ReleaseBuffer
17-02-28 20:06:12.404 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:06:12.404 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:06:12.404 -08 000000099 INF: ===================Camera #0 Frame #272===================
17-02-28 20:06:12.404 -08 000000046 INF: ===================Camera TDI===================
17-02-28 20:06:12.410 -08 000000099 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:06:12.411 -08 000000099 INF: ===================CameraTDI Cleanup===================
17-02-28 20:06:12.437 -08 000000053 INF: Y Motor: Unshifted Position: 997860
17-02-28 20:06:12.437 -08 000000046 INF: ======================================
17-02-28 20:06:12.487 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:12.559 -08 000000034 INF: FPGA: Recv EX1MV
17-02-28 20:06:12.559 -08 000000034 INF: FPGA: Recv EX2MV
17-02-28 20:06:12.559 -08 000000033 INF: Excitation Filter 2: Moved 107 steps in 372.9848 ms
17-02-28 20:06:12.559 -08 000000033 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.124 ms
17-02-28 20:06:12.559 -08 000000088 INF: Excitation Filter 1: Moved 107 steps in 373.2079 ms
17-02-28 20:06:12.559 -08 000000088 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.3653 ms
17-02-28 20:06:12.559 -08 000000088 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.4995 ms
17-02-28 20:06:12.559 -08 000000033 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.2 ms
17-02-28 20:06:12.560 -08 000000033 INF: ======================================
17-02-28 20:06:12.560 -08 000000088 INF: ======================================
17-02-28 20:06:12.561 -08 000000037 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:12.562 -08 000000037 INF: ======================================
17-02-28 20:06:12.576 -08 000000099 INF: Camera #0 ReleaseBuffer
17-02-28 20:06:12.576 -08 000000099 INF: ===================Camera TDI===================
17-02-28 20:06:12.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:12.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 17 of 40 seconds left===================
17-02-28 20:06:12.610 -08 000000099 INF: ======================================
17-02-28 20:06:12.612 -08 000000009 INF: ===================Camera TDI===================
17-02-28 20:06:12.613 -08 000000009 INF: ======================================
17-02-28 20:06:12.623 -08 000000053 INF: Y Motor: Unshifted Position: 990370
17-02-28 20:06:12.623 -08 000000053 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:06:12.623 -08 000000053 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:12.687 -08 000000053 INF: Y Motor: Recv v 0\r
17-02-28 20:06:12.687 -08 000000053 INF: Y Motor: Moved to 14.9037 after 7911 ms
17-02-28 20:06:12.687 -08 000000053 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:06:12.747 -08 000000053 INF: Y Motor: Recv v 4097\r
17-02-28 20:06:12.747 -08 000000053 INF: Y Motor: Status After move finished OK:
17-02-28 20:06:12.747 -08 000000053 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:12.809 -08 000000053 INF: Y Motor: Recv v 0\r
17-02-28 20:06:12.809 -08 000000053 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:12.809 -08 000000053 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:06:12.872 -08 000000053 INF: Y Motor: Recv v 134217728\r
17-02-28 20:06:12.872 -08 000000053 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:06:12.872 -08 000000053 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:06:12.872 -08 000000053 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:06:12.933 -08 000000053 INF: Y Motor: Recv v 0\r
17-02-28 20:06:12.933 -08 000000053 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:06:12.933 -08 000000053 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:06:12.933 -08 000000053 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:12.997 -08 000000053 INF: Y Motor: Recv ok\r
17-02-28 20:06:12.997 -08 000000053 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:06:12.997 -08 000000053 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:13.061 -08 000000053 INF: Y Motor: Recv ok\r
17-02-28 20:06:13.061 -08 000000053 INF: ======================================
17-02-28 20:06:13.062 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:13.063 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:13.064 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:13.064 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:06:13.120 -08 000000047 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:06:13.120 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:06:13.180 -08 000000096 INF: FPGA: Recv TDIYERD 1490373
17-02-28 20:06:13.180 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:06:13.245 -08 000000090 INF: FPGA: Recv ZADCR 36138
17-02-28 20:06:13.245 -08 000000042 INF: At scan end Y pos = 14.904 and Z pos = -0.138. Y moved -48.539 mm
17-02-28 20:06:13.245 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:06:13.307 -08 000000070 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:06:13.307 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:06:13.307 -08 000000042 INF: TDIScan finished after 11872.4812 ms
17-02-28 20:06:13.307 -08 000000042 INF: Image[0]: Y should trigger at 63.443 mm, 2nd row was at 64.352 mm (error = 0.909 mm)
17-02-28 20:06:13.307 -08 000000042 INF: Image[2]: Y should trigger at 63.443 mm, 2nd row was at 64.352 mm (error = 0.909 mm)
17-02-28 20:06:13.309 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:13.342 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.502 um
17-02-28 20:06:13.342 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:13.343 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:06:13.369 -08 000000093 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:06:13.369 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:13.370 -08 000000058 INF: ===================Dither Clean Up Command===================
17-02-28 20:06:13.370 -08 000000073 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:06:13.370 -08 000000066 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:06:13.370 -08 000000027 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:06:13.370 -08 000000027 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:06:13.371 -08 000000073 INF: ======================================
17-02-28 20:06:13.371 -08 000000027 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:06:13.371 -08 000000066 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:06:13.371 -08 000000066 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:06:13.371 -08 000000088 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:06:13.371 -08 000000081 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:06:13.371 -08 000000081 INF: ======================================
17-02-28 20:06:13.372 -08 000000088 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:06:13.431 -08 000000078 INF: FPGA: Recv ZSTEP 
17-02-28 20:06:13.431 -08 000000078 INF: FPGA: Recv ZSEL 
17-02-28 20:06:13.431 -08 000000088 INF: FPGA: Xmit ZDACW 41484\n
17-02-28 20:06:13.431 -08 000000027 INF: ======================================
17-02-28 20:06:13.433 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:06:13.433 -08 000000066 INF: ======================================
17-02-28 20:06:13.493 -08 000000093 INF: FPGA: Recv ZDACW 
17-02-28 20:06:13.493 -08 000000088 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:06:13.494 -08 000000088 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:06:13.555 -08 000000053 INF: FPGA: Recv TDIBB
17-02-28 20:06:13.555 -08 000000088 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:06:13.556 -08 000000088 INF: ======================================
17-02-28 20:06:13.557 -08 000000058 INF: ======================================
17-02-28 20:06:13.558 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:13.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:06:13.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:13.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:06:13.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:13.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:06:13.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:13.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:06:13.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:13.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308===================
17-02-28 20:06:13.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308===================
17-02-28 20:06:13.561 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 17 of 40 seconds left, Waiting for image analysis===================
17-02-28 20:06:13.561 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 17 of 40 seconds left===================
17-02-28 20:06:13.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:06:13.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308===================
17-02-28 20:06:13.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:13.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 16 of 40 seconds left===================
17-02-28 20:06:13.584 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:06:13.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:06:13.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308===================
17-02-28 20:06:13.585 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:13.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308===================
17-02-28 20:06:13.585 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:06:13.585 -08 000000042 INF: Transformed XStagePosition from 83.56464 mm to 83.5404862295836 mm.
17-02-28 20:06:13.597 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.552054355504 mm.
17-02-28 20:06:13.597 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.352054355504 mm.
17-02-28 20:06:13.597 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.442804355504 mm.
17-02-28 20:06:13.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:13.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:06:13.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:13.600 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -158.3 um, section = F_1
17-02-28 20:06:13.604 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:13.604 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:13.607 -08 000000101 INF: ===================MoveEmissionFilters===================
17-02-28 20:06:13.608 -08 000000078 INF: ===================Move X,Y===================
17-02-28 20:06:13.609 -08 000000078 INF: ===================Move X,Y, Parallel===================
17-02-28 20:06:13.610 -08 000000088 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:06:13.611 -08 000000088 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:06:13.611 -08 000000088 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:06:13.611 -08 000000088 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:06:13.613 -08 000000088 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:06:13.664 -08 000000020 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:06:13.664 -08 000000073 INF: ===================Move X Motor without settling===================
17-02-28 20:06:13.665 -08 000000069 INF: ===================TDI Scan Setup===================
17-02-28 20:06:13.665 -08 000000073 INF: X Motor: Xmit PR VM\n
17-02-28 20:06:13.665 -08 000000020 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:06:13.667 -08 000000069 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:13.669 -08 000000069 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:06:13.670 -08 000000069 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:06:13.671 -08 000000069 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:06:13.676 -08 000000089 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:06:13.676 -08 000000089 INF: ======================================
17-02-28 20:06:13.677 -08 000000085 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:06:13.678 -08 000000085 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:06:13.678 -08 000000085 INF: ======================================
17-02-28 20:06:13.679 -08 000000009 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:06:13.679 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:06:13.680 -08 000000020 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:06:13.680 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:06:13.680 -08 000000009 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:06:13.680 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:06:13.681 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:06:13.681 -08 000000020 INF: ======================================
17-02-28 20:06:13.690 -08 000000053 INF: ===================Camera Arm TDI===================
17-02-28 20:06:13.690 -08 000000010 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:06:13.690 -08 000000044 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:06:13.691 -08 000000010 INF: ======================================
17-02-28 20:06:13.691 -08 000000053 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:06:13.692 -08 000000044 INF: ======================================
17-02-28 20:06:13.692 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1105 Request: {"Cycle":2,"Lane":6,"Tile":1105,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF196","HCSMMF200","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.692 -08 000000053 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:06:13.693 -08 000000040 INF: ===================Move Y Motor without settling===================
17-02-28 20:06:13.693 -08 000000040 INF: Y Motor: Moving to 64.5521 mm @25.000 mm/sec, started at 14.9037 mm
17-02-28 20:06:13.693 -08 000000040 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:06:13.694 -08 000000010 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:06:13.694 -08 000000044 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:06:13.694 -08 000000010 INF: ======================================
17-02-28 20:06:13.695 -08 000000073 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:06:13.695 -08 000000073 INF: X Motor: Xmit PR VI\n
17-02-28 20:06:13.695 -08 000000044 INF: ======================================
17-02-28 20:06:13.696 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:06:13.696 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:06:13.696 -08 000000020 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:06:13.696 -08 000000050 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:06:13.697 -08 000000020 INF: ======================================
17-02-28 20:06:13.697 -08 000000032 INF: ======================================
17-02-28 20:06:13.697 -08 000000050 INF: ======================================
17-02-28 20:06:13.697 -08 000000085 INF: ======================================
17-02-28 20:06:13.709 -08 000000009 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:06:13.710 -08 000000009 INF: ======================================
17-02-28 20:06:13.712 -08 000000040 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:13.712 -08 000000101 INF: ======================================
17-02-28 20:06:13.748 -08 000000073 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:06:13.748 -08 000000073 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:06:13.748 -08 000000073 INF: X Motor: Moving to 83.5405 mm @15.000 mm/sec, started at 82.4399 mm
17-02-28 20:06:13.748 -08 000000073 INF: X Motor: Xmit MA 10052\n
17-02-28 20:06:13.760 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:06:13.760 -08 000000040 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:06:13.760 -08 000000040 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:13.805 -08 000000059 INF: FPGA: Recv ZSEL 
17-02-28 20:06:13.808 -08 000000073 INF: X Motor: Recv MA 10052\r\n>
17-02-28 20:06:13.808 -08 000000073 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:06:13.809 -08 000000069 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:06:13.809 -08 000000069 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:06:13.819 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1103 Request: {"Cycle":2,"Lane":6,"Tile":1103,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF281","HCSMMF204","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.821 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1101 Request: {"Cycle":2,"Lane":6,"Tile":1101,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF286","HCSMMF221","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.821 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1106 Request: {"Cycle":2,"Lane":6,"Tile":1106,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF246","HCSMMF179","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.822 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:06:13.822 -08 000000040 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:13.822 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1111 Request: {"Cycle":2,"Lane":6,"Tile":1111,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF252","HCSMMF210","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.823 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1102 Request: {"Cycle":2,"Lane":6,"Tile":1102,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF216","HCSMMF199","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.824 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1107 Request: {"Cycle":2,"Lane":6,"Tile":1107,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF270","HCSMMF234","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.825 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1108 Request: {"Cycle":2,"Lane":6,"Tile":1108,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF226","HCSMMF208","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.826 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1112 Request: {"Cycle":2,"Lane":6,"Tile":1112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF207","HCSMMF213","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.827 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1115 Request: {"Cycle":2,"Lane":6,"Tile":1115,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF274","HCSMMF177","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.828 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1110 Request: {"Cycle":2,"Lane":6,"Tile":1110,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF190","HCSMMF223","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.829 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1113 Request: {"Cycle":2,"Lane":6,"Tile":1113,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF220","HCSMMF237","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.830 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1114 Request: {"Cycle":2,"Lane":6,"Tile":1114,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF182","HCSMMF276","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.831 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1117 Request: {"Cycle":2,"Lane":6,"Tile":1117,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF280","HCSMMF191","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.831 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1119 Request: {"Cycle":2,"Lane":6,"Tile":1119,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF224","HCSMMF278","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.832 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1116 Request: {"Cycle":2,"Lane":6,"Tile":1116,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF263","HCSMMF282","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.833 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1118 Request: {"Cycle":2,"Lane":6,"Tile":1118,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF227","HCSMMF187","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.833 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1124 Request: {"Cycle":2,"Lane":6,"Tile":1124,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF236","HCSMMF245","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.834 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1123 Request: {"Cycle":2,"Lane":6,"Tile":1123,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF201","HCSMMF212","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.835 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1109 Request: {"Cycle":2,"Lane":6,"Tile":1109,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF202","HCSMMF241","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.836 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1122 Request: {"Cycle":2,"Lane":6,"Tile":1122,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF189","HCSMMF218","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.836 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1120 Request: {"Cycle":2,"Lane":6,"Tile":1120,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF284","HCSMMF258","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.838 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1126 Request: {"Cycle":2,"Lane":6,"Tile":1126,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF186","HCSMMF268","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.839 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1128 Request: {"Cycle":2,"Lane":6,"Tile":1128,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF269","HCSMMF206","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.840 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1121 Request: {"Cycle":2,"Lane":6,"Tile":1121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF209","HCSMMF230","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.840 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1104 Request: {"Cycle":2,"Lane":6,"Tile":1104,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF232","HCSMMF257","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.841 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1125 Request: {"Cycle":2,"Lane":6,"Tile":1125,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF231","HCSMMF271","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.842 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1127 Request: {"Cycle":2,"Lane":6,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF222","HCSMMF239","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:13.844 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:13.850 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:06:13.867 -08 000000037 INF: FPGA: Recv TDIBB
17-02-28 20:06:13.867 -08 000000069 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:06:13.868 -08 000000069 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:06:13.869 -08 000000069 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:13.870 -08 000000069 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:06:13.870 -08 000000069 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:06:13.871 -08 000000069 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:06:13.884 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:06:13.884 -08 000000040 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:13.884 -08 000000040 INF: Y Motor: Set target position to 5955205 encoder counts
17-02-28 20:06:13.884 -08 000000040 INF: Y Motor: Xmit s r0xca 5955205\r
17-02-28 20:06:13.931 -08 000000047 INF: FPGA: Recv ZSTEP 
17-02-28 20:06:13.931 -08 000000069 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:13.933 -08 000000069 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:06:13.933 -08 000000069 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:13.935 -08 000000069 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:06:13.935 -08 000000069 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:06:13.935 -08 000000069 INF: Z Motor: Arming to move to -0.1182 mm
17-02-28 20:06:13.935 -08 000000069 INF: FPGA: Xmit ZYT 6435205 4\n
17-02-28 20:06:13.941 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:13.942 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:06:13.948 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:06:13.948 -08 000000040 INF: Y Motor: Start the move command
17-02-28 20:06:13.948 -08 000000040 INF: Y Motor: Xmit t 1\r
17-02-28 20:06:13.978 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:13.984 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:06:13.993 -08 000000089 INF: FPGA: Recv ZYT 
17-02-28 20:06:13.993 -08 000000069 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490370 enc / 14.904 mm / ) = 6435205 enc / 64.352 mm
17-02-28 20:06:13.993 -08 000000069 INF: FPGA: Xmit ZARM 30998\n
17-02-28 20:06:14.010 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:06:14.010 -08 000000040 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:06:14.010 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:14.055 -08 000000064 INF: FPGA: Recv ZARM
17-02-28 20:06:14.055 -08 000000069 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8348 ms
17-02-28 20:06:14.055 -08 000000069 INF: Z Motor: ArmAbsStepped took 119.6884 ms
17-02-28 20:06:14.055 -08 000000069 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:14.057 -08 000000069 INF: ===================TDI Scan Setup===================
17-02-28 20:06:14.058 -08 000000069 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:06:14.058 -08 000000069 INF: ===================TDI Scan Setup===================
17-02-28 20:06:14.060 -08 000000069 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:06:14.060 -08 000000069 INF: ===================TDI Scan Setup===================
17-02-28 20:06:14.062 -08 000000069 INF: ======================================
17-02-28 20:06:14.079 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:14.084 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:06:14.136 -08 000000040 INF: Y Motor: Unshifted Position: 1071440
17-02-28 20:06:14.186 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:14.190 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:14.196 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:06:14.290 -08 000000053 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:06:14.290 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:06:14.290 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:06:14.291 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:14.305 -08 000000053 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:06:14.307 -08 000000053 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:06:14.310 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:14.430 -08 000000073 INF: X Motor: Xmit PR ER\n
17-02-28 20:06:14.448 -08 000000040 INF: Y Motor: Unshifted Position: 1776210
17-02-28 20:06:14.495 -08 000000073 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:06:14.495 -08 000000073 INF: X Motor: Moved to 83.5410 after 687 ms
17-02-28 20:06:14.495 -08 000000073 INF: ======================================
17-02-28 20:06:14.498 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:14.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:14.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 15 of 40 seconds left===================
17-02-28 20:06:14.591 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:06:14.621 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:14.759 -08 000000040 INF: Y Motor: Unshifted Position: 2562057
17-02-28 20:06:14.809 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:14.914 -08 000000053 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:06:14.914 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:06:14.915 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:06:14.931 -08 000000053 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:06:14.932 -08 000000053 INF: ===================Camera Arm TDI===================
17-02-28 20:06:14.933 -08 000000053 INF: ======================================
17-02-28 20:06:14.934 -08 000000088 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:06:14.935 -08 000000088 INF: ======================================
17-02-28 20:06:14.936 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:15.071 -08 000000040 INF: Y Motor: Unshifted Position: 3342834
17-02-28 20:06:15.121 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:15.247 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:15.382 -08 000000040 INF: Y Motor: Unshifted Position: 4117907
17-02-28 20:06:15.432 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:15.558 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:15.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:15.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 14 of 40 seconds left===================
17-02-28 20:06:15.696 -08 000000040 INF: Y Motor: Unshifted Position: 4903681
17-02-28 20:06:15.746 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:15.871 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:16.006 -08 000000040 INF: Y Motor: Unshifted Position: 5678249
17-02-28 20:06:16.056 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:16.183 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:16.321 -08 000000040 INF: Y Motor: Unshifted Position: 5955207
17-02-28 20:06:16.321 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:06:16.321 -08 000000040 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:16.383 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:06:16.383 -08 000000040 INF: Y Motor: Moved to 64.5521 after 2372 ms
17-02-28 20:06:16.383 -08 000000040 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:06:16.445 -08 000000040 INF: Y Motor: Recv v 4096\r
17-02-28 20:06:16.445 -08 000000040 INF: Y Motor: Status After move finished OK:
17-02-28 20:06:16.445 -08 000000040 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:16.507 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:06:16.507 -08 000000040 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:16.507 -08 000000040 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:06:16.571 -08 000000040 INF: Y Motor: Recv v 402653184\r
17-02-28 20:06:16.571 -08 000000040 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:06:16.571 -08 000000040 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:06:16.571 -08 000000040 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:06:16.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:16.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 13 of 40 seconds left===================
17-02-28 20:06:16.633 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:06:16.633 -08 000000040 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:06:16.633 -08 000000040 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:06:16.633 -08 000000040 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:16.695 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:06:16.695 -08 000000040 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:06:16.695 -08 000000040 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:16.756 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:06:16.756 -08 000000040 INF: ======================================
17-02-28 20:06:16.758 -08 000000078 INF: ===================Move X,Y===================
17-02-28 20:06:16.760 -08 000000078 INF: ======================================
17-02-28 20:06:16.761 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:16.762 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:16.763 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:06:16.763 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:06:16.818 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:06:16.818 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:06:16.865 -08 000000009 INF: FPGA: Recv ZFREQCL
17-02-28 20:06:16.865 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:06:16.865 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:16.866 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:06:16.927 -08 000000058 INF: FPGA: Recv TDIYERD 6455206
17-02-28 20:06:16.927 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455206 counts (64.552 mm)
17-02-28 20:06:16.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:16.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:16.929 -08 000000098 INF: ===================TDI FPGA Arm===================
17-02-28 20:06:16.929 -08 000000039 INF: ===================Set YMotor gains for scans===================
17-02-28 20:06:16.929 -08 000000039 INF: ======================================
17-02-28 20:06:16.930 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:06:16.930 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:06:16.930 -08 000000098 INF: FPGA: Xmit TDIYPOS 6344280\n
17-02-28 20:06:16.988 -08 000000073 INF: FPGA: Recv TDIYPOS
17-02-28 20:06:16.988 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:06:16.990 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:06:16.990 -08 000000098 INF: FPGA: Xmit TDIYARM3 139264 6435205 1 1\n
17-02-28 20:06:17.052 -08 000000083 INF: FPGA: Recv TDIYARM3
17-02-28 20:06:17.053 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:06:17.054 -08 000000098 INF: ===================TDI FPGA Arm===================
17-02-28 20:06:17.055 -08 000000098 INF: ======================================
17-02-28 20:06:17.056 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:17.057 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:17.057 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:17.057 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:17.058 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:17.059 -08 000000050 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:06:17.059 -08 000000092 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:06:17.059 -08 000000050 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:06:17.059 -08 000000050 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:06:17.059 -08 000000050 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:06:17.059 -08 000000050 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:06:17.059 -08 000000092 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:06:17.059 -08 000000092 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:06:17.059 -08 000000092 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:06:17.060 -08 000000092 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:06:17.426 -08 000000077 INF: FPGA: Recv EX1MV
17-02-28 20:06:17.426 -08 000000077 INF: FPGA: Recv EX2MV
17-02-28 20:06:17.426 -08 000000050 INF: Excitation Filter 1: Moved -107 steps in 367.0907 ms
17-02-28 20:06:17.426 -08 000000092 INF: Excitation Filter 2: Moved -107 steps in 366.9192 ms
17-02-28 20:06:17.426 -08 000000050 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.2956 ms
17-02-28 20:06:17.426 -08 000000050 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.3857 ms
17-02-28 20:06:17.426 -08 000000092 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.1583 ms
17-02-28 20:06:17.426 -08 000000092 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.3667 ms
17-02-28 20:06:17.427 -08 000000092 INF: ======================================
17-02-28 20:06:17.427 -08 000000050 INF: ======================================
17-02-28 20:06:17.428 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:17.429 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:17.430 -08 000000081 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:17.430 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:06:17.430 -08 000000064 INF: ===================FPGA Z Wait===================
17-02-28 20:06:17.430 -08 000000099 INF: ===================Move Y Motor without settling===================
17-02-28 20:06:17.430 -08 000000099 INF: Y Motor: Moving to 14.9037 mm @6.500 mm/sec, started at 64.5521 mm
17-02-28 20:06:17.430 -08 000000099 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:06:17.430 -08 000000099 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:17.431 -08 000000081 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:06:17.431 -08 000000081 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:06:17.431 -08 000000035 INF: ===================Camera TDI, Parallel===================
17-02-28 20:06:17.432 -08 000000078 INF: ===================Camera TDI===================
17-02-28 20:06:17.432 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:06:17.432 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:06:17.434 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:17.434 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:17.436 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:17.436 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:17.504 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:06:17.504 -08 000000099 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:06:17.504 -08 000000099 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:17.569 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:06:17.569 -08 000000099 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:17.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:17.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 12 of 40 seconds left===================
17-02-28 20:06:17.584 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:17.584 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:17.586 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:17.586 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:17.631 -08 000000099 INF: Y Motor: Recv v 0\r
17-02-28 20:06:17.631 -08 000000099 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:17.631 -08 000000099 INF: Y Motor: Set target position to 990372 encoder counts
17-02-28 20:06:17.631 -08 000000099 INF: Y Motor: Xmit s r0xca 990372\r
17-02-28 20:06:17.692 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:06:17.692 -08 000000099 INF: Y Motor: Start the move command
17-02-28 20:06:17.692 -08 000000099 INF: Y Motor: Xmit t 1\r
17-02-28 20:06:17.734 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:17.734 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:17.736 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:17.736 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:17.754 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:06:17.754 -08 000000099 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:06:17.754 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:17.801 -08 000000039 INF: FPGA: Recv ZWAIT 
17-02-28 20:06:17.801 -08 000000064 INF: ======================================
17-02-28 20:06:17.881 -08 000000099 INF: Y Motor: Unshifted Position: 5893134
17-02-28 20:06:17.884 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:06:17.884 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:06:17.884 -08 000000078 INF: ===================Camera #0 Frame #4===================
17-02-28 20:06:17.886 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:06:17.886 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:06:17.886 -08 000000068 INF: ===================Camera #2 Frame #4===================
17-02-28 20:06:17.931 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:18.047 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:06:18.047 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:06:18.047 -08 000000078 INF: ===================Camera #0 Frame #10===================
17-02-28 20:06:18.049 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:06:18.049 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:06:18.049 -08 000000068 INF: ===================Camera #2 Frame #10===================
17-02-28 20:06:18.054 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:18.192 -08 000000099 INF: Y Motor: Unshifted Position: 5689036
17-02-28 20:06:18.215 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 15, frameCount = 16.
17-02-28 20:06:18.215 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 16
17-02-28 20:06:18.215 -08 000000078 INF: ===================Camera #0 Frame #16===================
17-02-28 20:06:18.218 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 15, frameCount = 16.
17-02-28 20:06:18.218 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 16
17-02-28 20:06:18.218 -08 000000068 INF: ===================Camera #2 Frame #16===================
17-02-28 20:06:18.242 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:18.368 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:18.384 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 21, frameCount = 22.
17-02-28 20:06:18.384 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 22
17-02-28 20:06:18.384 -08 000000078 INF: ===================Camera #0 Frame #22===================
17-02-28 20:06:18.387 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:06:18.387 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:06:18.387 -08 000000068 INF: ===================Camera #2 Frame #23===================
17-02-28 20:06:18.503 -08 000000099 INF: Y Motor: Unshifted Position: 5486893
17-02-28 20:06:18.552 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:06:18.552 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:06:18.552 -08 000000078 INF: ===================Camera #0 Frame #29===================
17-02-28 20:06:18.553 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:18.559 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:06:18.559 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:06:18.559 -08 000000068 INF: ===================Camera #2 Frame #29===================
17-02-28 20:06:18.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:18.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 11 of 40 seconds left===================
17-02-28 20:06:18.679 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:18.723 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:06:18.723 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:06:18.723 -08 000000078 INF: ===================Camera #0 Frame #35===================
17-02-28 20:06:18.728 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:06:18.728 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:06:18.728 -08 000000068 INF: ===================Camera #2 Frame #35===================
17-02-28 20:06:18.817 -08 000000099 INF: Y Motor: Unshifted Position: 5284522
17-02-28 20:06:18.867 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:18.891 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41.
17-02-28 20:06:18.891 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41
17-02-28 20:06:18.891 -08 000000078 INF: ===================Camera #0 Frame #41===================
17-02-28 20:06:18.897 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41.
17-02-28 20:06:18.897 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41
17-02-28 20:06:18.897 -08 000000068 INF: ===================Camera #2 Frame #41===================
17-02-28 20:06:18.991 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:19.059 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 46, frameCount = 47.
17-02-28 20:06:19.059 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 47
17-02-28 20:06:19.059 -08 000000078 INF: ===================Camera #0 Frame #47===================
17-02-28 20:06:19.066 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:06:19.066 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:06:19.066 -08 000000068 INF: ===================Camera #2 Frame #48===================
17-02-28 20:06:19.129 -08 000000099 INF: Y Motor: Unshifted Position: 5081498
17-02-28 20:06:19.179 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:19.229 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:06:19.229 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:06:19.229 -08 000000078 INF: ===================Camera #0 Frame #54===================
17-02-28 20:06:19.240 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:06:19.240 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:06:19.240 -08 000000068 INF: ===================Camera #2 Frame #54===================
17-02-28 20:06:19.302 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:19.403 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:06:19.403 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:06:19.403 -08 000000078 INF: ===================Camera #0 Frame #60===================
17-02-28 20:06:19.411 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:06:19.411 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:06:19.411 -08 000000068 INF: ===================Camera #2 Frame #60===================
17-02-28 20:06:19.440 -08 000000099 INF: Y Motor: Unshifted Position: 4877400
17-02-28 20:06:19.490 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:19.573 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-02-28 20:06:19.573 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-02-28 20:06:19.573 -08 000000078 INF: ===================Camera #0 Frame #66===================
17-02-28 20:06:19.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:19.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 10 of 40 seconds left===================
17-02-28 20:06:19.581 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:06:19.581 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:06:19.581 -08 000000068 INF: ===================Camera #2 Frame #67===================
17-02-28 20:06:19.616 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:19.743 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 71, frameCount = 72.
17-02-28 20:06:19.743 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 72
17-02-28 20:06:19.743 -08 000000078 INF: ===================Camera #0 Frame #72===================
17-02-28 20:06:19.751 -08 000000099 INF: Y Motor: Unshifted Position: 4675254
17-02-28 20:06:19.755 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:06:19.755 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:06:19.755 -08 000000068 INF: ===================Camera #2 Frame #73===================
17-02-28 20:06:19.801 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:19.913 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:06:19.913 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:06:19.913 -08 000000078 INF: ===================Camera #0 Frame #79===================
17-02-28 20:06:19.926 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:06:19.926 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:06:19.926 -08 000000068 INF: ===================Camera #2 Frame #79===================
17-02-28 20:06:19.927 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:20.065 -08 000000099 INF: Y Motor: Unshifted Position: 4472875
17-02-28 20:06:20.086 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:06:20.086 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:06:20.086 -08 000000078 INF: ===================Camera #0 Frame #85===================
17-02-28 20:06:20.097 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:06:20.098 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:06:20.098 -08 000000068 INF: ===================Camera #2 Frame #86===================
17-02-28 20:06:20.115 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:20.238 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:20.256 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-02-28 20:06:20.256 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-02-28 20:06:20.256 -08 000000078 INF: ===================Camera #0 Frame #91===================
17-02-28 20:06:20.272 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:06:20.272 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:06:20.272 -08 000000068 INF: ===================Camera #2 Frame #92===================
17-02-28 20:06:20.376 -08 000000099 INF: Y Motor: Unshifted Position: 4268563
17-02-28 20:06:20.426 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:20.426 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:06:20.426 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:06:20.426 -08 000000078 INF: ===================Camera #0 Frame #98===================
17-02-28 20:06:20.443 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:06:20.443 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:06:20.443 -08 000000068 INF: ===================Camera #2 Frame #98===================
17-02-28 20:06:20.552 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:20.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:20.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 9 of 40 seconds left===================
17-02-28 20:06:20.599 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:06:20.599 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:06:20.599 -08 000000078 INF: ===================Camera #0 Frame #104===================
17-02-28 20:06:20.614 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:06:20.614 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:06:20.614 -08 000000068 INF: ===================Camera #2 Frame #105===================
17-02-28 20:06:20.687 -08 000000099 INF: Y Motor: Unshifted Position: 4066402
17-02-28 20:06:20.737 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:20.767 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:06:20.767 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:06:20.767 -08 000000078 INF: ===================Camera #0 Frame #110===================
17-02-28 20:06:20.788 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:06:20.788 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:06:20.788 -08 000000068 INF: ===================Camera #2 Frame #111===================
17-02-28 20:06:20.863 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:20.951 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:06:20.952 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:06:20.952 -08 000000078 INF: ===================Camera #0 Frame #117===================
17-02-28 20:06:20.958 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:06:20.958 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:06:20.958 -08 000000068 INF: ===================Camera #2 Frame #117===================
17-02-28 20:06:21.015 -08 000000099 INF: Y Motor: Unshifted Position: 3852342
17-02-28 20:06:21.065 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:21.126 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:06:21.126 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:06:21.126 -08 000000078 INF: ===================Camera #0 Frame #123===================
17-02-28 20:06:21.129 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:06:21.130 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:06:21.130 -08 000000068 INF: ===================Camera #2 Frame #124===================
17-02-28 20:06:21.189 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:21.294 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:06:21.294 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:06:21.294 -08 000000078 INF: ===================Camera #0 Frame #130===================
17-02-28 20:06:21.303 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:06:21.303 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:06:21.303 -08 000000068 INF: ===================Camera #2 Frame #130===================
17-02-28 20:06:21.328 -08 000000099 INF: Y Motor: Unshifted Position: 3649540
17-02-28 20:06:21.378 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:21.467 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:06:21.467 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:06:21.467 -08 000000078 INF: ===================Camera #0 Frame #136===================
17-02-28 20:06:21.473 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:06:21.473 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:06:21.473 -08 000000068 INF: ===================Camera #2 Frame #136===================
17-02-28 20:06:21.502 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:21.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:21.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 8 of 40 seconds left===================
17-02-28 20:06:21.637 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:06:21.637 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:06:21.637 -08 000000078 INF: ===================Camera #0 Frame #142===================
17-02-28 20:06:21.638 -08 000000099 INF: Y Motor: Unshifted Position: 3448033
17-02-28 20:06:21.643 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:06:21.643 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:06:21.643 -08 000000068 INF: ===================Camera #2 Frame #142===================
17-02-28 20:06:21.688 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:21.806 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:06:21.806 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:06:21.806 -08 000000078 INF: ===================Camera #0 Frame #148===================
17-02-28 20:06:21.813 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:06:21.813 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:06:21.813 -08 000000068 INF: ===================Camera #2 Frame #149===================
17-02-28 20:06:21.815 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:21.952 -08 000000099 INF: Y Motor: Unshifted Position: 3243719
17-02-28 20:06:21.975 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:06:21.975 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:06:21.975 -08 000000078 INF: ===================Camera #0 Frame #155===================
17-02-28 20:06:21.986 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:06:21.986 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:06:21.986 -08 000000068 INF: ===================Camera #2 Frame #155===================
17-02-28 20:06:22.002 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:22.126 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:22.148 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:06:22.148 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:06:22.148 -08 000000078 INF: ===================Camera #0 Frame #161===================
17-02-28 20:06:22.156 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:06:22.156 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:06:22.156 -08 000000068 INF: ===================Camera #2 Frame #161===================
17-02-28 20:06:22.262 -08 000000099 INF: Y Motor: Unshifted Position: 3042012
17-02-28 20:06:22.312 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:22.318 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:06:22.318 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:06:22.318 -08 000000078 INF: ===================Camera #0 Frame #167===================
17-02-28 20:06:22.326 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:06:22.326 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:06:22.326 -08 000000068 INF: ===================Camera #2 Frame #168===================
17-02-28 20:06:22.439 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:22.488 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:06:22.488 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:06:22.488 -08 000000078 INF: ===================Camera #0 Frame #174===================
17-02-28 20:06:22.500 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:06:22.500 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:06:22.500 -08 000000068 INF: ===================Camera #2 Frame #174===================
17-02-28 20:06:22.575 -08 000000099 INF: Y Motor: Unshifted Position: 2837266
17-02-28 20:06:22.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:22.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 7 of 40 seconds left===================
17-02-28 20:06:22.625 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:22.661 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:06:22.661 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:06:22.661 -08 000000078 INF: ===================Camera #0 Frame #180===================
17-02-28 20:06:22.670 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:06:22.670 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:06:22.670 -08 000000068 INF: ===================Camera #2 Frame #180===================
17-02-28 20:06:22.749 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:22.831 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:06:22.831 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:06:22.831 -08 000000078 INF: ===================Camera #0 Frame #186===================
17-02-28 20:06:22.841 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:06:22.841 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:06:22.841 -08 000000068 INF: ===================Camera #2 Frame #187===================
17-02-28 20:06:22.888 -08 000000099 INF: Y Motor: Unshifted Position: 2634901
17-02-28 20:06:22.938 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:23.001 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:06:23.001 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:06:23.001 -08 000000078 INF: ===================Camera #0 Frame #192===================
17-02-28 20:06:23.015 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:06:23.015 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:06:23.015 -08 000000068 INF: ===================Camera #2 Frame #193===================
17-02-28 20:06:23.063 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:23.171 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:06:23.171 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:06:23.171 -08 000000078 INF: ===================Camera #0 Frame #199===================
17-02-28 20:06:23.186 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:06:23.186 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:06:23.186 -08 000000068 INF: ===================Camera #2 Frame #199===================
17-02-28 20:06:23.199 -08 000000099 INF: Y Motor: Unshifted Position: 2432757
17-02-28 20:06:23.249 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:23.344 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:06:23.344 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:06:23.344 -08 000000078 INF: ===================Camera #0 Frame #205===================
17-02-28 20:06:23.356 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:06:23.356 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:06:23.356 -08 000000068 INF: ===================Camera #2 Frame #206===================
17-02-28 20:06:23.373 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:23.512 -08 000000099 INF: Y Motor: Unshifted Position: 2229089
17-02-28 20:06:23.514 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:06:23.514 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:06:23.514 -08 000000078 INF: ===================Camera #0 Frame #211===================
17-02-28 20:06:23.530 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:06:23.530 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:06:23.530 -08 000000068 INF: ===================Camera #2 Frame #212===================
17-02-28 20:06:23.562 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:23.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:23.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 6 of 40 seconds left===================
17-02-28 20:06:23.684 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:06:23.684 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:06:23.684 -08 000000078 INF: ===================Camera #0 Frame #218===================
17-02-28 20:06:23.686 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:23.701 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:06:23.701 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:06:23.701 -08 000000068 INF: ===================Camera #2 Frame #218===================
17-02-28 20:06:23.822 -08 000000099 INF: Y Motor: Unshifted Position: 2027584
17-02-28 20:06:23.857 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:06:23.857 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:06:23.857 -08 000000078 INF: ===================Camera #0 Frame #224===================
17-02-28 20:06:23.872 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:23.872 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:06:23.872 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:06:23.872 -08 000000068 INF: ===================Camera #2 Frame #225===================
17-02-28 20:06:23.997 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:24.027 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:06:24.027 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:06:24.027 -08 000000078 INF: ===================Camera #0 Frame #230===================
17-02-28 20:06:24.046 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:06:24.046 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:06:24.046 -08 000000068 INF: ===================Camera #2 Frame #231===================
17-02-28 20:06:24.136 -08 000000099 INF: Y Motor: Unshifted Position: 1823269
17-02-28 20:06:24.186 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:24.197 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:06:24.197 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:06:24.197 -08 000000078 INF: ===================Camera #0 Frame #236===================
17-02-28 20:06:24.217 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:06:24.217 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:06:24.217 -08 000000068 INF: ===================Camera #2 Frame #237===================
17-02-28 20:06:24.311 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:24.367 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:06:24.367 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:06:24.367 -08 000000078 INF: ===================Camera #0 Frame #243===================
17-02-28 20:06:24.388 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:06:24.388 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:06:24.388 -08 000000068 INF: ===================Camera #2 Frame #244===================
17-02-28 20:06:24.446 -08 000000099 INF: Y Motor: Unshifted Position: 1621769
17-02-28 20:06:24.496 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:24.540 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:06:24.540 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:06:24.540 -08 000000078 INF: ===================Camera #0 Frame #249===================
17-02-28 20:06:24.562 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:06:24.562 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:06:24.562 -08 000000068 INF: ===================Camera #2 Frame #250===================
17-02-28 20:06:24.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:24.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 5 of 40 seconds left===================
17-02-28 20:06:24.623 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:24.710 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:06:24.710 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:06:24.710 -08 000000078 INF: ===================Camera #0 Frame #255===================
17-02-28 20:06:24.733 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:06:24.733 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:06:24.733 -08 000000068 INF: ===================Camera #2 Frame #256===================
17-02-28 20:06:24.760 -08 000000099 INF: Y Motor: Unshifted Position: 1418095
17-02-28 20:06:24.810 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:24.880 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:06:24.880 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:06:24.880 -08 000000078 INF: ===================Camera #0 Frame #262===================
17-02-28 20:06:24.904 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:06:24.904 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:06:24.904 -08 000000068 INF: ===================Camera #2 Frame #263===================
17-02-28 20:06:24.933 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:25.053 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:06:25.053 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:06:25.053 -08 000000078 INF: ===================Camera #0 Frame #268===================
17-02-28 20:06:25.072 -08 000000099 INF: Y Motor: Unshifted Position: 1214427
17-02-28 20:06:25.078 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:06:25.078 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:06:25.078 -08 000000068 INF: ===================Camera #2 Frame #269===================
17-02-28 20:06:25.122 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:25.194 -08 000000067 INF: FPGA: Recv TDIYWAIT
17-02-28 20:06:25.194 -08 000000081 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:25.196 -08 000000081 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:06:25.197 -08 000000065 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:06:25.197 -08 000000020 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:06:25.197 -08 000000065 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:06:25.197 -08 000000065 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:06:25.197 -08 000000065 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:06:25.197 -08 000000065 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:06:25.197 -08 000000020 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:06:25.197 -08 000000020 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:06:25.197 -08 000000020 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:06:25.198 -08 000000020 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:06:25.223 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:06:25.223 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:06:25.223 -08 000000078 INF: ===================Camera #0 Frame #272===================
17-02-28 20:06:25.236 -08 000000078 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:06:25.237 -08 000000078 INF: ===================CameraTDI Cleanup===================
17-02-28 20:06:25.246 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:25.368 -08 000000078 INF: Camera #0 ReleaseBuffer
17-02-28 20:06:25.368 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:06:25.368 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:06:25.368 -08 000000078 INF: ===================Camera TDI===================
17-02-28 20:06:25.368 -08 000000068 INF: ===================Camera #2 Frame #272===================
17-02-28 20:06:25.377 -08 000000068 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:06:25.378 -08 000000068 INF: ===================CameraTDI Cleanup===================
17-02-28 20:06:25.382 -08 000000099 INF: Y Motor: Unshifted Position: 1012934
17-02-28 20:06:25.398 -08 000000078 INF: ======================================
17-02-28 20:06:25.432 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:25.548 -08 000000068 INF: Camera #2 ReleaseBuffer
17-02-28 20:06:25.548 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:06:25.567 -08 000000047 INF: FPGA: Recv EX1MV
17-02-28 20:06:25.567 -08 000000047 INF: FPGA: Recv EX2MV
17-02-28 20:06:25.567 -08 000000020 INF: Excitation Filter 2: Moved 107 steps in 369.5944 ms
17-02-28 20:06:25.567 -08 000000020 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.6964 ms
17-02-28 20:06:25.567 -08 000000020 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.8732 ms
17-02-28 20:06:25.567 -08 000000065 INF: Excitation Filter 1: Moved 107 steps in 369.8184 ms
17-02-28 20:06:25.567 -08 000000065 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.0202 ms
17-02-28 20:06:25.567 -08 000000065 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.2008 ms
17-02-28 20:06:25.567 -08 000000020 INF: ======================================
17-02-28 20:06:25.567 -08 000000065 INF: ======================================
17-02-28 20:06:25.569 -08 000000099 INF: Y Motor: Unshifted Position: 990371
17-02-28 20:06:25.569 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:06:25.569 -08 000000099 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:25.569 -08 000000081 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:25.570 -08 000000081 INF: ======================================
17-02-28 20:06:25.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:25.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 4 of 40 seconds left===================
17-02-28 20:06:25.582 -08 000000068 INF: ======================================
17-02-28 20:06:25.583 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:06:25.585 -08 000000035 INF: ======================================
17-02-28 20:06:25.634 -08 000000099 INF: Y Motor: Recv v 0\r
17-02-28 20:06:25.634 -08 000000099 INF: Y Motor: Moved to 14.9037 after 7880 ms
17-02-28 20:06:25.634 -08 000000099 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:06:25.696 -08 000000099 INF: Y Motor: Recv v 4097\r
17-02-28 20:06:25.696 -08 000000099 INF: Y Motor: Status After move finished OK:
17-02-28 20:06:25.696 -08 000000099 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:25.758 -08 000000099 INF: Y Motor: Recv v 0\r
17-02-28 20:06:25.758 -08 000000099 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:25.758 -08 000000099 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:06:25.820 -08 000000099 INF: Y Motor: Recv v 134217728\r
17-02-28 20:06:25.820 -08 000000099 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:06:25.820 -08 000000099 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:06:25.820 -08 000000099 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:06:25.882 -08 000000099 INF: Y Motor: Recv v 0\r
17-02-28 20:06:25.882 -08 000000099 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:06:25.882 -08 000000099 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:06:25.882 -08 000000099 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:25.946 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:06:25.946 -08 000000099 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:06:25.946 -08 000000099 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:26.008 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:06:26.008 -08 000000099 INF: ======================================
17-02-28 20:06:26.009 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:26.010 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:26.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:26.011 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:06:26.068 -08 000000009 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:06:26.068 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:06:26.129 -08 000000058 INF: FPGA: Recv TDIYERD 1490373
17-02-28 20:06:26.129 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:06:26.132 -08 000000040 INF: RunCopyService queue size at 2/28/2017 8:06:26 PM is 2
17-02-28 20:06:26.192 -08 000000032 INF: FPGA: Recv ZADCR 36216
17-02-28 20:06:26.192 -08 000000042 INF: At scan end Y pos = 14.904 and Z pos = -0.138. Y moved -48.539 mm
17-02-28 20:06:26.192 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:06:26.257 -08 000000053 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:06:26.257 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:06:26.257 -08 000000042 INF: TDIScan finished after 12670.272 ms
17-02-28 20:06:26.257 -08 000000042 INF: Image[0]: Y should trigger at 63.443 mm, 2nd row was at 64.352 mm (error = 0.909 mm)
17-02-28 20:06:26.257 -08 000000042 INF: Image[2]: Y should trigger at 63.443 mm, 2nd row was at 64.352 mm (error = 0.909 mm)
17-02-28 20:06:26.259 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:26.292 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.608 um
17-02-28 20:06:26.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:26.293 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:06:26.319 -08 000000098 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:06:26.320 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:26.320 -08 000000039 INF: ===================Dither Clean Up Command===================
17-02-28 20:06:26.320 -08 000000035 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:06:26.321 -08 000000083 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:06:26.321 -08 000000067 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:06:26.321 -08 000000067 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:06:26.321 -08 000000067 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:06:26.321 -08 000000035 INF: ======================================
17-02-28 20:06:26.321 -08 000000083 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:06:26.321 -08 000000083 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:06:26.321 -08 000000101 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:06:26.321 -08 000000100 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:06:26.322 -08 000000100 INF: ======================================
17-02-28 20:06:26.322 -08 000000101 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:06:26.381 -08 000000010 INF: FPGA: Recv ZSTEP 
17-02-28 20:06:26.381 -08 000000010 INF: FPGA: Recv ZSEL 
17-02-28 20:06:26.381 -08 000000101 INF: FPGA: Xmit ZDACW 41484\n
17-02-28 20:06:26.381 -08 000000067 INF: ======================================
17-02-28 20:06:26.383 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:06:26.383 -08 000000083 INF: ======================================
17-02-28 20:06:26.444 -08 000000089 INF: FPGA: Recv ZDACW 
17-02-28 20:06:26.444 -08 000000101 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:06:26.444 -08 000000101 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:06:26.505 -08 000000010 INF: FPGA: Recv TDIBB
17-02-28 20:06:26.505 -08 000000101 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:06:26.506 -08 000000101 INF: ======================================
17-02-28 20:06:26.507 -08 000000039 INF: ======================================
17-02-28 20:06:26.508 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:26.509 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:06:26.509 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:26.509 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:06:26.510 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:26.510 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:06:26.510 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:26.510 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:06:26.510 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:26.510 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308===================
17-02-28 20:06:26.510 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308===================
17-02-28 20:06:26.511 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 4 of 40 seconds left, Waiting for image analysis===================
17-02-28 20:06:26.511 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 4 of 40 seconds left===================
17-02-28 20:06:26.511 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:06:26.512 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308===================
17-02-28 20:06:26.534 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:06:26.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:06:26.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:06:26.535 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:26.535 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:06:26.536 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:06:26.581 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface===================
17-02-28 20:06:26.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:26.600 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:26.601 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:06:26.601 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:06:26.620 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1204 Request: {"Cycle":2,"Lane":6,"Tile":1204,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF232","HCSMMF230","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.701 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:26.701 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 3 of 40 seconds left===================
17-02-28 20:06:26.709 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:06:26.710 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:26.710 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:06:26.710 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:06:26.832 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1216 Request: {"Cycle":2,"Lane":6,"Tile":1216,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF275","HCSMMF272","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.833 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1205 Request: {"Cycle":2,"Lane":6,"Tile":1205,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF257","HCSMMF206","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.835 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1210 Request: {"Cycle":2,"Lane":6,"Tile":1210,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF197","HCSMMF213","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.837 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1202 Request: {"Cycle":2,"Lane":6,"Tile":1202,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF239","HCSMMF193","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.840 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1209 Request: {"Cycle":2,"Lane":6,"Tile":1209,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF212","HCSMMF211","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.842 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1208 Request: {"Cycle":2,"Lane":6,"Tile":1208,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF287","HCSMMF251","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.843 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1207 Request: {"Cycle":2,"Lane":6,"Tile":1207,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF199","HCSMMF216","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.844 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1214 Request: {"Cycle":2,"Lane":6,"Tile":1214,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF284","HCSMMF252","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.845 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1218 Request: {"Cycle":2,"Lane":6,"Tile":1218,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF270","HCSMMF236","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.846 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1213 Request: {"Cycle":2,"Lane":6,"Tile":1213,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF276","HCSMMF234","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.847 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1212 Request: {"Cycle":2,"Lane":6,"Tile":1212,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF274","HCSMMF177","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.847 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1211 Request: {"Cycle":2,"Lane":6,"Tile":1211,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF176","HCSMMF203","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.848 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1201 Request: {"Cycle":2,"Lane":6,"Tile":1201,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF222","HCSMMF261","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.849 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1225 Request: {"Cycle":2,"Lane":6,"Tile":1225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF204","HCSMMF229","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.850 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1217 Request: {"Cycle":2,"Lane":6,"Tile":1217,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF225","HCSMMF200","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.851 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1219 Request: {"Cycle":2,"Lane":6,"Tile":1219,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF218","HCSMMF259","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.852 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1221 Request: {"Cycle":2,"Lane":6,"Tile":1221,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF189","HCSMMF180","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.852 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1226 Request: {"Cycle":2,"Lane":6,"Tile":1226,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF191","HCSMMF263","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.853 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1215 Request: {"Cycle":2,"Lane":6,"Tile":1215,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF185","HCSMMF258","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.854 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1223 Request: {"Cycle":2,"Lane":6,"Tile":1223,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF233","HCSMMF227","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.855 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1220 Request: {"Cycle":2,"Lane":6,"Tile":1220,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF255","HCSMMF267","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.856 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1224 Request: {"Cycle":2,"Lane":6,"Tile":1224,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF205","HCSMMF248","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.856 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1206 Request: {"Cycle":2,"Lane":6,"Tile":1206,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF201","HCSMMF253","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.857 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1228 Request: {"Cycle":2,"Lane":6,"Tile":1228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF215","HCSMMF224","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.858 -08 000000020 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1222 Request: {"Cycle":2,"Lane":6,"Tile":1222,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF219","HCSMMF221","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.859 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1227 Request: {"Cycle":2,"Lane":6,"Tile":1227,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF183","HCSMMF262","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.860 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 1203 Request: {"Cycle":2,"Lane":6,"Tile":1203,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF273","HCSMMF228","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:26.863 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:26.869 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:06:26.962 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:26.962 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:06:27.000 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:27.006 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:06:27.082 -08 000000098 INF: FPGA: Recv MIOCOMPR
17-02-28 20:06:27.082 -08 000000042 INF: Compensator: Moved OutOfPath in 372 ms
17-02-28 20:06:27.082 -08 000000042 INF: Lane 7, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:06:27.083 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:27.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:27.085 -08 000000054 INF: ===================Move Tilt Motor 1===================
17-02-28 20:06:27.085 -08 000000047 INF: ===================Move Tilt Motor 3===================
17-02-28 20:06:27.085 -08 000000030 INF: ===================Move Tilt Motor 2===================
17-02-28 20:06:27.085 -08 000000054 INF: ======================================
17-02-28 20:06:27.085 -08 000000030 INF: ======================================
17-02-28 20:06:27.086 -08 000000047 INF: ======================================
17-02-28 20:06:27.087 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:27.088 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:27.094 -08 000000042 INF: Transformed XStagePosition from 85.77563 mm to 85.775634765625 mm.
17-02-28 20:06:27.097 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:27.103 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:06:27.106 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:06:27.107 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:06:27.107 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:06:27.107 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:06:27.107 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:06:27.110 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:06:27.111 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:06:27.111 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:06:27.144 -08 000000033 INF: FPGA: Recv ZSTEP 
17-02-28 20:06:27.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:06:27.145 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:06:27.145 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1583 mm
17-02-28 20:06:27.145 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:06:27.188 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:27.193 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:06:27.208 -08 000000004 INF: FPGA: Recv ZTRG 
17-02-28 20:06:27.208 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:06:27.270 -08 000000046 INF: FPGA: Recv ZYT 
17-02-28 20:06:27.270 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:06:27.270 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:06:27.281 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:27.331 -08 000000093 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:06:27.331 -08 000000093 INF: FPGA: Recv ZMV 
17-02-28 20:06:27.331 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:06:27.331 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 60.9494 ms
17-02-28 20:06:27.331 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:06:27.393 -08 000000033 INF: FPGA: Recv ZDACR 60292
17-02-28 20:06:27.393 -08 000000042 INF: Z Motor: MoveAndTrigger took 248.2044 ms w/comms
17-02-28 20:06:27.393 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:06:27.393 -08 000000042 INF: Z Motor: MoveAbsStepped took 248.4173 ms
17-02-28 20:06:27.393 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:06:27.394 -08 000000042 INF: Transformed XStagePosition from 85.77563 mm to 85.775634765625 mm.
17-02-28 20:06:27.403 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:06:27.403 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:06:27.403 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:06:27.403 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:06:27.403 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:06:27.458 -08 000000066 INF: FPGA: Recv ZSTEP 
17-02-28 20:06:27.468 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:06:27.469 -08 000000042 INF: Transformed XStagePosition from 85.77563 mm to 85.775634765625 mm.
17-02-28 20:06:27.477 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:06:27.477 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:06:27.477 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:06:27.479 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:27.479 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:06:27.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:27.480 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = G_1
17-02-28 20:06:27.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:27.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:27.481 -08 000000047 INF: ===================MoveEmissionFilters===================
17-02-28 20:06:27.481 -08 000000093 INF: ===================Move X,Y===================
17-02-28 20:06:27.482 -08 000000093 INF: ===================Move X,Y, Parallel===================
17-02-28 20:06:27.482 -08 000000064 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:06:27.482 -08 000000050 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:06:27.482 -08 000000070 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:06:27.482 -08 000000030 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:06:27.483 -08 000000045 INF: ===================Move X Motor without settling===================
17-02-28 20:06:27.483 -08 000000074 INF: ===================Move Y Motor without settling===================
17-02-28 20:06:27.483 -08 000000070 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:06:27.483 -08 000000045 INF: X Motor: Xmit PR VM\n
17-02-28 20:06:27.483 -08 000000030 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:06:27.483 -08 000000074 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9037 mm
17-02-28 20:06:27.483 -08 000000050 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:06:27.483 -08 000000074 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:06:27.484 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:27.484 -08 000000064 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:06:27.484 -08 000000051 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:06:27.484 -08 000000062 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:06:27.484 -08 000000098 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:06:27.484 -08 000000065 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:06:27.485 -08 000000068 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:06:27.485 -08 000000037 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:06:27.485 -08 000000062 INF: ======================================
17-02-28 20:06:27.485 -08 000000073 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:06:27.485 -08 000000044 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:06:27.485 -08 000000068 INF: ======================================
17-02-28 20:06:27.485 -08 000000098 INF: ======================================
17-02-28 20:06:27.485 -08 000000073 INF: ======================================
17-02-28 20:06:27.485 -08 000000044 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:06:27.485 -08 000000051 INF: ======================================
17-02-28 20:06:27.486 -08 000000044 INF: ======================================
17-02-28 20:06:27.486 -08 000000037 INF: ======================================
17-02-28 20:06:27.486 -08 000000030 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:06:27.487 -08 000000064 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:06:27.487 -08 000000070 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:06:27.488 -08 000000065 INF: ======================================
17-02-28 20:06:27.488 -08 000000030 INF: ======================================
17-02-28 20:06:27.488 -08 000000064 INF: ======================================
17-02-28 20:06:27.488 -08 000000070 INF: ======================================
17-02-28 20:06:27.489 -08 000000050 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:06:27.490 -08 000000050 INF: ======================================
17-02-28 20:06:27.491 -08 000000047 INF: ======================================
17-02-28 20:06:27.568 -08 000000045 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:06:27.568 -08 000000045 INF: X Motor: Xmit PR VI\n
17-02-28 20:06:27.570 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:06:27.570 -08 000000074 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:06:27.570 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:27.571 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:06:27.629 -08 000000045 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:06:27.629 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:06:27.629 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:27.629 -08 000000045 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:06:27.629 -08 000000045 INF: X Motor: Moving to 85.7756 mm @15.000 mm/sec, started at 83.5410 mm
17-02-28 20:06:27.629 -08 000000045 INF: X Motor: Xmit MA 10967\n
17-02-28 20:06:27.694 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:06:27.694 -08 000000045 INF: X Motor: Recv MA 10967\r\n>
17-02-28 20:06:27.694 -08 000000074 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:27.694 -08 000000045 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:06:27.694 -08 000000074 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:06:27.694 -08 000000074 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:06:27.701 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:27.701 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 2 of 40 seconds left===================
17-02-28 20:06:27.755 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:06:27.755 -08 000000074 INF: Y Motor: Start the move command
17-02-28 20:06:27.755 -08 000000074 INF: Y Motor: Xmit t 1\r
17-02-28 20:06:27.817 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:06:27.817 -08 000000074 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:06:27.817 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:27.970 -08 000000074 INF: Y Motor: Unshifted Position: 1071486
17-02-28 20:06:28.020 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:28.133 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:28.271 -08 000000074 INF: Y Motor: Unshifted Position: 1822002
17-02-28 20:06:28.321 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:28.333 -08 000000045 INF: X Motor: Xmit PR ER\n
17-02-28 20:06:28.395 -08 000000045 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:06:28.395 -08 000000045 INF: X Motor: Moved to 85.7749 after 701 ms
17-02-28 20:06:28.395 -08 000000045 INF: ======================================
17-02-28 20:06:28.445 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:28.581 -08 000000074 INF: Y Motor: Unshifted Position: 2597076
17-02-28 20:06:28.631 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:28.701 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:28.701 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 1 of 40 seconds left===================
17-02-28 20:06:28.759 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:28.895 -08 000000074 INF: Y Motor: Unshifted Position: 3375330
17-02-28 20:06:28.945 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:29.068 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:29.207 -08 000000074 INF: Y Motor: Unshifted Position: 4155382
17-02-28 20:06:29.257 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:29.381 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:29.518 -08 000000074 INF: Y Motor: Unshifted Position: 4938714
17-02-28 20:06:29.568 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:29.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:29.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:29.579 -08 000000018 INF: WaitCommand(40000) end
17-02-28 20:06:29.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:29.580 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:29.580 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:29.644 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:06:29.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Selecting Reagent HIM (1)===================
17-02-28 20:06:29.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:29.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:06:29.695 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:29.831 -08 000000074 INF: Y Motor: Unshifted Position: 5711271
17-02-28 20:06:29.881 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:30.005 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:30.143 -08 000000074 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:06:30.143 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:06:30.143 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:30.205 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:06:30.205 -08 000000074 INF: Y Motor: Moved to 64.5335 after 2388 ms
17-02-28 20:06:30.205 -08 000000074 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:06:30.268 -08 000000074 INF: Y Motor: Recv v 4096\r
17-02-28 20:06:30.268 -08 000000074 INF: Y Motor: Status After move finished OK:
17-02-28 20:06:30.268 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:30.331 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:06:30.331 -08 000000074 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:30.331 -08 000000074 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:06:30.387 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:30.387 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:06:30.387 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:30.391 -08 000000074 INF: Y Motor: Recv v 402653184\r
17-02-28 20:06:30.391 -08 000000074 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:06:30.391 -08 000000074 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:06:30.391 -08 000000074 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:06:30.452 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:06:30.455 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:06:30.455 -08 000000074 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:06:30.455 -08 000000074 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:06:30.455 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:30.460 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 1, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 12, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:06:30.516 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:06:30.516 -08 000000074 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:06:30.516 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:30.552 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:06:30.578 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:06:30.578 -08 000000074 INF: ======================================
17-02-28 20:06:30.579 -08 000000093 INF: ===================Move X,Y===================
17-02-28 20:06:30.581 -08 000000093 INF: ======================================
17-02-28 20:06:30.582 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:30.582 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:30.583 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:06:30.583 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:06:30.639 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:06:30.639 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:06:30.640 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:06:30.640 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:06:30.700 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:06:30.700 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:06:30.700 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:30.701 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:06:30.739 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:06:30.765 -08 000000053 INF: FPGA: Recv TDIYERD 6453353
17-02-28 20:06:30.765 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453353 counts (64.534 mm)
17-02-28 20:06:30.766 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:30.766 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:30.767 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:06:30.767 -08 000000065 INF: ===================Set YMotor gains for scans===================
17-02-28 20:06:30.768 -08 000000065 INF: ======================================
17-02-28 20:06:30.768 -08 000000051 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:06:30.768 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:06:30.769 -08 000000051 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:06:30.770 -08 000000051 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:06:30.770 -08 000000051 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:06:30.828 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:30.828 -08 000000096 INF: FPGA: Recv TDIYPOS
17-02-28 20:06:30.828 -08 000000051 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:06:30.830 -08 000000051 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:06:30.830 -08 000000051 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:06:30.889 -08 000000097 INF: FPGA: Recv TDIYARM2
17-02-28 20:06:30.889 -08 000000051 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:06:30.890 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:06:30.892 -08 000000051 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:06:30.892 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:06:30.894 -08 000000051 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:06:30.895 -08 000000051 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:06:30.895 -08 000000051 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:06:30.928 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:31.013 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:31.262 -08 000000051 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:06:31.262 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:06:31.262 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:06:31.263 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:31.277 -08 000000051 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:06:31.279 -08 000000051 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:06:31.326 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:06:31.426 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:06:31.514 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:31.614 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:31.657 -08 000000051 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:06:31.657 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:06:31.657 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:06:31.672 -08 000000051 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:06:31.674 -08 000000051 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:06:31.675 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:06:31.676 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:31.677 -08 000000051 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:06:31.677 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:31.679 -08 000000051 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:06:31.679 -08 000000051 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:06:31.679 -08 000000051 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:06:31.679 -08 000000051 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:06:31.701 -08 000000032 INF: FPGA: Recv ZYT 
17-02-28 20:06:31.701 -08 000000051 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:06:31.701 -08 000000051 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:06:31.704 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:06:31.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-02-28 20:06:31.763 -08 000000065 INF: FPGA: Recv ZARM
17-02-28 20:06:31.763 -08 000000051 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9675 ms
17-02-28 20:06:31.763 -08 000000051 INF: Z Motor: ArmAbsStepped took 84.0783 ms
17-02-28 20:06:31.763 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:31.765 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:06:31.766 -08 000000051 INF: ======================================
17-02-28 20:06:31.767 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:31.768 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:31.768 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:06:31.768 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:06:31.769 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:06:31.770 -08 000000010 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:06:31.770 -08 000000099 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:06:31.770 -08 000000010 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:06:31.770 -08 000000010 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:06:31.770 -08 000000010 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:06:31.770 -08 000000099 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:06:31.770 -08 000000010 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:06:31.770 -08 000000099 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:06:31.770 -08 000000099 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:06:31.771 -08 000000099 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:06:31.804 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP2304R\r
17-02-28 20:06:31.889 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:31.989 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:32.076 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:32.137 -08 000000097 INF: FPGA: Recv EX1MV
17-02-28 20:06:32.137 -08 000000097 INF: FPGA: Recv EX2MV
17-02-28 20:06:32.137 -08 000000099 INF: Excitation Filter 2: Moved -107 steps in 366.7733 ms
17-02-28 20:06:32.137 -08 000000010 INF: Excitation Filter 1: Moved -107 steps in 366.9709 ms
17-02-28 20:06:32.137 -08 000000099 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.9767 ms
17-02-28 20:06:32.137 -08 000000099 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.072 ms
17-02-28 20:06:32.137 -08 000000010 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.0998 ms
17-02-28 20:06:32.137 -08 000000010 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.2702 ms
17-02-28 20:06:32.137 -08 000000010 INF: ======================================
17-02-28 20:06:32.138 -08 000000099 INF: ======================================
17-02-28 20:06:32.139 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:06:32.140 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:06:32.141 -08 000000092 INF: ===================Serial===================
17-02-28 20:06:32.141 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:06:32.141 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:32.141 -08 000000040 INF: ===================Move Y Motor without settling===================
17-02-28 20:06:32.141 -08 000000040 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:06:32.141 -08 000000040 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:06:32.141 -08 000000040 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:32.142 -08 000000092 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:06:32.142 -08 000000098 INF: ===================Camera TDI, Parallel===================
17-02-28 20:06:32.142 -08 000000092 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:06:32.143 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:06:32.143 -08 000000045 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:06:32.143 -08 000000020 INF: ===================Camera TDI===================
17-02-28 20:06:32.144 -08 000000020 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:32.144 -08 000000020 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:32.144 -08 000000045 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:06:32.144 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:32.144 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:32.201 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:06:32.201 -08 000000040 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:06:32.201 -08 000000040 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:32.263 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:06:32.263 -08 000000040 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:32.294 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:32.294 -08 000000020 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:32.294 -08 000000020 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:32.294 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:32.325 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:06:32.325 -08 000000040 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:32.325 -08 000000040 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:06:32.325 -08 000000040 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:06:32.326 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:32.386 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:32.387 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:06:32.387 -08 000000040 INF: Y Motor: Start the move command
17-02-28 20:06:32.387 -08 000000040 INF: Y Motor: Xmit t 1\r
17-02-28 20:06:32.444 -08 000000020 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:32.444 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:32.444 -08 000000020 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:32.444 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:32.453 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:06:32.453 -08 000000040 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:06:32.453 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:32.576 -08 000000040 INF: Y Motor: Unshifted Position: 5934883
17-02-28 20:06:32.594 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:32.594 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:32.594 -08 000000020 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:32.594 -08 000000020 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:32.626 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:32.636 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:32.700 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:32.744 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:06:32.744 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:06:32.744 -08 000000020 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:06:32.744 -08 000000020 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:06:32.744 -08 000000066 INF: ===================Camera #0 Frame #1===================
17-02-28 20:06:32.744 -08 000000020 INF: ===================Camera #2 Frame #1===================
17-02-28 20:06:32.751 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:32.887 -08 000000040 INF: Y Motor: Unshifted Position: 5888228
17-02-28 20:06:32.897 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:06:32.897 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:06:32.897 -08 000000066 INF: ===================Camera #0 Frame #3===================
17-02-28 20:06:32.898 -08 000000020 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:06:32.898 -08 000000020 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:06:32.898 -08 000000020 INF: ===================Camera #2 Frame #3===================
17-02-28 20:06:32.937 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:32.950 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:33.012 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:33.053 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:06:33.053 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:06:33.053 -08 000000066 INF: ===================Camera #0 Frame #4===================
17-02-28 20:06:33.054 -08 000000020 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:06:33.054 -08 000000020 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:06:33.054 -08 000000020 INF: ===================Camera #2 Frame #4===================
17-02-28 20:06:33.063 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:33.200 -08 000000040 INF: Y Motor: Unshifted Position: 5841223
17-02-28 20:06:33.206 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:06:33.206 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:06:33.206 -08 000000066 INF: ===================Camera #0 Frame #5===================
17-02-28 20:06:33.207 -08 000000020 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:06:33.207 -08 000000020 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:06:33.207 -08 000000020 INF: ===================Camera #2 Frame #5===================
17-02-28 20:06:33.250 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:33.261 -08 000000059 INF: FPGA: Recv ZWAIT 
17-02-28 20:06:33.261 -08 000000059 INF: FPGA: Recv TDIYWAIT
17-02-28 20:06:33.261 -08 000000092 INF: ===================Serial===================
17-02-28 20:06:33.261 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:33.262 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:33.263 -08 000000092 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:06:33.263 -08 000000045 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:06:33.263 -08 000000092 INF: ===================Serial===================
17-02-28 20:06:33.264 -08 000000100 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:06:33.264 -08 000000073 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:06:33.264 -08 000000100 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:06:33.264 -08 000000100 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:06:33.264 -08 000000100 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:06:33.264 -08 000000073 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:06:33.264 -08 000000073 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:06:33.264 -08 000000073 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:06:33.264 -08 000000100 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:06:33.265 -08 000000092 INF: ======================================
17-02-28 20:06:33.267 -08 000000073 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:06:33.324 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:33.359 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:06:33.359 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:06:33.359 -08 000000066 INF: ===================Camera #0 Frame #6===================
17-02-28 20:06:33.360 -08 000000020 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:06:33.360 -08 000000020 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:06:33.360 -08 000000020 INF: ===================Camera #2 Frame #6===================
17-02-28 20:06:33.362 -08 000000066 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:06:33.363 -08 000000066 INF: ===================CameraTDI Cleanup===================
17-02-28 20:06:33.363 -08 000000020 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:06:33.364 -08 000000020 INF: ===================CameraTDI Cleanup===================
17-02-28 20:06:33.375 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:33.386 -08 000000066 INF: Camera #0 ReleaseBuffer
17-02-28 20:06:33.386 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:06:33.388 -08 000000066 INF: ======================================
17-02-28 20:06:33.411 -08 000000020 INF: Camera #2 ReleaseBuffer
17-02-28 20:06:33.411 -08 000000020 INF: ===================Camera TDI===================
17-02-28 20:06:33.412 -08 000000020 INF: ======================================
17-02-28 20:06:33.414 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:06:33.415 -08 000000098 INF: ======================================
17-02-28 20:06:33.512 -08 000000040 INF: Y Motor: Unshifted Position: 5797058
17-02-28 20:06:33.562 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:33.574 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:33.634 -08 000000101 INF: FPGA: Recv EX1MV
17-02-28 20:06:33.634 -08 000000101 INF: FPGA: Recv EX2MV
17-02-28 20:06:33.634 -08 000000073 INF: Excitation Filter 2: Moved 107 steps in 369.5393 ms
17-02-28 20:06:33.634 -08 000000100 INF: Excitation Filter 1: Moved 107 steps in 369.7028 ms
17-02-28 20:06:33.634 -08 000000100 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.7994 ms
17-02-28 20:06:33.634 -08 000000100 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.8735 ms
17-02-28 20:06:33.634 -08 000000073 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.6401 ms
17-02-28 20:06:33.634 -08 000000073 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.1382 ms
17-02-28 20:06:33.634 -08 000000100 INF: ======================================
17-02-28 20:06:33.635 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:33.635 -08 000000073 INF: ======================================
17-02-28 20:06:33.636 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:33.637 -08 000000045 INF: ======================================
17-02-28 20:06:33.699 -08 000000040 INF: Y Motor: Unshifted Position: 5797040
17-02-28 20:06:33.699 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:06:33.699 -08 000000040 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:33.761 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:06:33.761 -08 000000040 INF: Y Motor: Moved to 62.9704 after 1308 ms
17-02-28 20:06:33.761 -08 000000040 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:06:33.824 -08 000000040 INF: Y Motor: Recv v 4097\r
17-02-28 20:06:33.824 -08 000000040 INF: Y Motor: Status After move finished OK:
17-02-28 20:06:33.824 -08 000000040 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:33.885 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:33.886 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:06:33.886 -08 000000040 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:33.886 -08 000000040 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:06:33.947 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:33.948 -08 000000040 INF: Y Motor: Recv v 134217728\r
17-02-28 20:06:33.948 -08 000000040 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:06:33.948 -08 000000040 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:06:33.948 -08 000000040 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:06:34.009 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:06:34.009 -08 000000040 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:06:34.009 -08 000000040 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:06:34.009 -08 000000040 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:34.072 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:06:34.072 -08 000000040 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:06:34.072 -08 000000040 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:34.136 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:06:34.136 -08 000000040 INF: ======================================
17-02-28 20:06:34.137 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:06:34.138 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:06:34.139 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:34.139 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:06:34.196 -08 000000020 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:06:34.196 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:06:34.197 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:34.259 -08 000000100 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:06:34.259 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:06:34.260 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:34.321 -08 000000054 INF: FPGA: Recv ZADCR 2426
17-02-28 20:06:34.321 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:06:34.321 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:06:34.383 -08 000000040 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:06:34.383 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:06:34.383 -08 000000042 INF: TDIScan finished after 6914.6356 ms
17-02-28 20:06:34.383 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:06:34.383 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:06:34.383 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:06:34.445 -08 000000083 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:06:34.445 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:34.446 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:34.447 -08 000000078 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:06:34.447 -08 000000045 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:06:34.447 -08 000000093 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:06:34.447 -08 000000045 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:06:34.447 -08 000000045 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:06:34.447 -08 000000078 INF: ======================================
17-02-28 20:06:34.448 -08 000000093 INF: ======================================
17-02-28 20:06:34.509 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:06:34.509 -08 000000045 INF: ======================================
17-02-28 20:06:34.510 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:34.510 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:34.511 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:34.512 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:06:34.557 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:34.557 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:06:34.570 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:34.600 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:34.601 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:06:34.626 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:34.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:06:34.651 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:06:34.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:06:34.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:06:34.653 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:06:34.661 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:06:34.661 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:06:34.661 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:06:34.820 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:34.884 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:35.134 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:35.196 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:35.348 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:06:35.371 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0889654997591827Best Z position at top surface = -0.160755659205557Best Z position at top surface + compensator offset = -0.138055659205557 C:2,L:7,T
17-02-28 20:06:35.372 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.160755659205557
17-02-28 20:06:35.372 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.98039
17-02-28 20:06:35.372 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0889654997591827
17-02-28 20:06:35.372 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.63504
17-02-28 20:06:35.372 -08 000000042 INF: Z-height at LaneTopSurface is -0.160755659205557.
17-02-28 20:06:35.372 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:06:35.446 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:35.508 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:35.508 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:06:35.508 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:06:35.568 -08 000000096 INF: FPGA: Recv ZSTEP 
17-02-28 20:06:35.568 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:06:35.570 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:35.570 -08 000000042 INF: Lane 7, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:06:35.570 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:35.571 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:35.571 -08 000000081 INF: ===================Move Tilt Motor 1===================
17-02-28 20:06:35.571 -08 000000073 INF: ===================Move Tilt Motor 2===================
17-02-28 20:06:35.572 -08 000000083 INF: ===================Move Tilt Motor 3===================
17-02-28 20:06:35.572 -08 000000073 INF: ======================================
17-02-28 20:06:35.572 -08 000000081 INF: ======================================
17-02-28 20:06:35.573 -08 000000083 INF: ======================================
17-02-28 20:06:35.573 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:35.574 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:35.575 -08 000000042 INF: ETF Best Z: -0.1380557 mm (36190 DAC)
17-02-28 20:06:35.575 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:35.576 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:35.576 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:06:35.576 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:06:36.011 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:36.014 -08 000000032 INF: FPGA: Recv MIOCOMPF
17-02-28 20:06:36.014 -08 000000042 INF: Compensator: Moved IntoPath in 438 ms
17-02-28 20:06:36.014 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:36.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:36.021 -08 000000042 INF: Swath 1 position calculated to be: {X=85.22163, Y=39.76308} from estimated center X= 85.73699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:06:36.021 -08 000000042 INF: Swath 2 position calculated to be: {X=86.32964, Y=39.76308} from estimated center X= 85.73699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:06:36.027 -08 000000042 INF: Swath 0: Converted transform from (-38.96089, -5.895671) pixels to (-0.013455, -0.00207) mm.
17-02-28 20:06:36.033 -08 000000042 INF: Swath 1: Converted transform from (-62.17422, -5.482029) pixels to (-0.02139, -0.001725) mm.
17-02-28 20:06:36.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308===================
17-02-28 20:06:36.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308===================
17-02-28 20:06:36.034 -08 000000042 INF: Transformed XStagePosition from 85.22163 mm to 85.2081789113581 mm.
17-02-28 20:06:36.045 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5510193555392 mm.
17-02-28 20:06:36.045 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3510193555392 mm.
17-02-28 20:06:36.045 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4417693555392 mm.
17-02-28 20:06:36.047 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:36.047 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:06:36.048 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:36.048 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = G_1
17-02-28 20:06:36.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:36.055 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:36.055 -08 000000097 INF: ===================MoveEmissionFilters===================
17-02-28 20:06:36.055 -08 000000051 INF: ===================Move X,Y===================
17-02-28 20:06:36.056 -08 000000098 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:06:36.056 -08 000000054 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:06:36.056 -08 000000053 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:06:36.056 -08 000000051 INF: ===================Move X,Y, Parallel===================
17-02-28 20:06:36.056 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:06:36.056 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:06:36.057 -08 000000098 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:06:36.057 -08 000000098 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:06:36.057 -08 000000098 INF: Z Motor: Moving to -0.1581 mm, started at -0.0100 mm
17-02-28 20:06:36.057 -08 000000098 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:06:36.057 -08 000000054 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:06:36.057 -08 000000074 INF: ===================Move X Motor without settling===================
17-02-28 20:06:36.057 -08 000000050 INF: ===================Move Y Motor without settling===================
17-02-28 20:06:36.057 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:06:36.057 -08 000000074 INF: X Motor: Xmit PR VM\n
17-02-28 20:06:36.057 -08 000000050 INF: Y Motor: Moving to 64.5510 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:06:36.057 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:06:36.058 -08 000000050 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:06:36.058 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:36.058 -08 000000083 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:06:36.058 -08 000000083 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:06:36.058 -08 000000081 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:06:36.058 -08 000000089 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:06:36.058 -08 000000077 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:06:36.058 -08 000000101 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:06:36.058 -08 000000035 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:06:36.058 -08 000000083 INF: ======================================
17-02-28 20:06:36.059 -08 000000081 INF: ======================================
17-02-28 20:06:36.059 -08 000000101 INF: ======================================
17-02-28 20:06:36.059 -08 000000077 INF: ======================================
17-02-28 20:06:36.059 -08 000000089 INF: ======================================
17-02-28 20:06:36.060 -08 000000053 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:06:36.060 -08 000000035 INF: ======================================
17-02-28 20:06:36.060 -08 000000054 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:06:36.061 -08 000000101 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:06:36.061 -08 000000065 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:06:36.061 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:06:36.061 -08 000000065 INF: ======================================
17-02-28 20:06:36.061 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:06:36.061 -08 000000101 INF: ======================================
17-02-28 20:06:36.061 -08 000000054 INF: ======================================
17-02-28 20:06:36.062 -08 000000045 INF: ======================================
17-02-28 20:06:36.062 -08 000000059 INF: ======================================
17-02-28 20:06:36.063 -08 000000053 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:06:36.064 -08 000000053 INF: ======================================
17-02-28 20:06:36.065 -08 000000097 INF: ======================================
17-02-28 20:06:36.067 -08 000000040 INF: FPGA: Recv ZTRG 
17-02-28 20:06:36.067 -08 000000098 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:06:36.068 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:06:36.068 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:06:36.068 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:06:36.068 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:06:36.069 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left===================
17-02-28 20:06:36.131 -08 000000035 INF: FPGA: Recv ZYT 
17-02-28 20:06:36.131 -08 000000098 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:06:36.131 -08 000000098 INF: FPGA: Xmit ZMV 41433\n
17-02-28 20:06:36.133 -08 000000074 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:06:36.133 -08 000000074 INF: X Motor: Xmit PR VI\n
17-02-28 20:06:36.133 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:06:36.133 -08 000000050 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:06:36.133 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:36.194 -08 000000099 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:06:36.194 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:06:36.196 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:06:36.196 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:36.196 -08 000000074 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:06:36.196 -08 000000074 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:06:36.196 -08 000000074 INF: X Motor: Moving to 85.2082 mm @15.000 mm/sec, started at 85.7749 mm
17-02-28 20:06:36.196 -08 000000074 INF: X Motor: Xmit MA 10735\n
17-02-28 20:06:36.258 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:06:36.258 -08 000000050 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:36.258 -08 000000074 INF: X Motor: Recv MA 10735\r\n>
17-02-28 20:06:36.258 -08 000000050 INF: Y Motor: Set target position to 5955102 encoder counts
17-02-28 20:06:36.258 -08 000000050 INF: Y Motor: Xmit s r0xca 5955102\r
17-02-28 20:06:36.258 -08 000000074 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:06:36.318 -08 000000020 INF: FPGA: Recv ZMV 
17-02-28 20:06:36.318 -08 000000098 INF: Z Motor: MoveAndTrigger 'ZMV' command took 186.0031 ms
17-02-28 20:06:36.318 -08 000000098 INF: FPGA: Xmit ZDACR\n
17-02-28 20:06:36.320 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:06:36.320 -08 000000050 INF: Y Motor: Start the move command
17-02-28 20:06:36.320 -08 000000050 INF: Y Motor: Xmit t 1\r
17-02-28 20:06:36.380 -08 000000009 INF: FPGA: Recv ZDACR 41433
17-02-28 20:06:36.380 -08 000000098 INF: Z Motor: MoveAndTrigger took 322.1022 ms w/comms
17-02-28 20:06:36.380 -08 000000098 INF: Z Motor: After move to -0.1581, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:06:36.380 -08 000000098 INF: Z Motor: MoveAbsStepped took 322.2554 ms
17-02-28 20:06:36.380 -08 000000098 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:06:36.382 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:06:36.382 -08 000000098 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:06:36.382 -08 000000050 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:06:36.382 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:36.382 -08 000000065 INF: ===================TDI Scan Setup===================
17-02-28 20:06:36.383 -08 000000066 INF: ===================Camera Arm TDI===================
17-02-28 20:06:36.383 -08 000000065 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:36.384 -08 000000066 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:06:36.384 -08 000000065 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:06:36.384 -08 000000065 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:06:36.385 -08 000000065 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:06:36.385 -08 000000066 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:06:36.442 -08 000000068 INF: FPGA: Recv ZSEL 
17-02-28 20:06:36.443 -08 000000065 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:06:36.443 -08 000000065 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:06:36.506 -08 000000053 INF: FPGA: Recv TDIBB
17-02-28 20:06:36.507 -08 000000065 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:06:36.508 -08 000000050 INF: Y Motor: Unshifted Position: 5878510
17-02-28 20:06:36.508 -08 000000065 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:06:36.508 -08 000000065 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:36.510 -08 000000065 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:06:36.510 -08 000000065 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:06:36.510 -08 000000065 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:06:36.558 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:36.569 -08 000000078 INF: FPGA: Recv ZSTEP 
17-02-28 20:06:36.569 -08 000000065 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:36.571 -08 000000065 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:06:36.571 -08 000000065 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:36.573 -08 000000065 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:06:36.573 -08 000000065 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:06:36.573 -08 000000065 INF: Z Motor: Arming to move to -0.1181 mm
17-02-28 20:06:36.573 -08 000000065 INF: FPGA: Xmit ZYT 6435102 4\n
17-02-28 20:06:36.631 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:06:36.631 -08 000000065 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6378510 enc / 63.785 mm / ) = 6435102 enc / 64.351 mm
17-02-28 20:06:36.631 -08 000000065 INF: FPGA: Xmit ZARM 30947\n
17-02-28 20:06:36.685 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:36.693 -08 000000081 INF: FPGA: Recv ZARM
17-02-28 20:06:36.693 -08 000000065 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.012 ms
17-02-28 20:06:36.693 -08 000000065 INF: Z Motor: ArmAbsStepped took 119.9047 ms
17-02-28 20:06:36.693 -08 000000065 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:36.694 -08 000000065 INF: ===================TDI Scan Setup===================
17-02-28 20:06:36.696 -08 000000074 INF: X Motor: Xmit PR ER\n
17-02-28 20:06:36.696 -08 000000065 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:06:36.696 -08 000000065 INF: ===================TDI Scan Setup===================
17-02-28 20:06:36.698 -08 000000065 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:06:36.698 -08 000000065 INF: ===================TDI Scan Setup===================
17-02-28 20:06:36.699 -08 000000065 INF: ======================================
17-02-28 20:06:36.757 -08 000000074 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:06:36.757 -08 000000074 INF: X Motor: Moved to 85.2085 after 499 ms
17-02-28 20:06:36.757 -08 000000074 INF: ======================================
17-02-28 20:06:36.819 -08 000000050 INF: Y Motor: Unshifted Position: 5955103
17-02-28 20:06:36.819 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:06:36.819 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:36.881 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:06:36.881 -08 000000050 INF: Y Motor: Moved to 64.5510 after 499 ms
17-02-28 20:06:36.881 -08 000000050 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:06:36.943 -08 000000050 INF: Y Motor: Recv v 4096\r
17-02-28 20:06:36.943 -08 000000050 INF: Y Motor: Status After move finished OK:
17-02-28 20:06:36.943 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:37.005 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:06:37.005 -08 000000050 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:37.005 -08 000000050 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:06:37.070 -08 000000050 INF: Y Motor: Recv v 402653184\r
17-02-28 20:06:37.070 -08 000000050 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:06:37.070 -08 000000050 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:06:37.070 -08 000000050 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:06:37.070 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:06:37.070 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 4 of 5 seconds left===================
17-02-28 20:06:37.130 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:06:37.130 -08 000000050 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:06:37.130 -08 000000050 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:06:37.130 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:37.195 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:06:37.195 -08 000000050 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:06:37.195 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:37.257 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:06:37.257 -08 000000050 INF: ======================================
17-02-28 20:06:37.258 -08 000000051 INF: ===================Move X,Y===================
17-02-28 20:06:37.259 -08 000000051 INF: ======================================
17-02-28 20:06:37.374 -08 000000066 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:06:37.374 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:06:37.374 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:06:37.389 -08 000000066 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:06:37.391 -08 000000066 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:06:38.070 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:06:38.070 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left===================
17-02-28 20:06:38.451 -08 000000066 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:06:38.451 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:06:38.451 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:06:38.467 -08 000000066 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:06:38.469 -08 000000066 INF: ===================Camera Arm TDI===================
17-02-28 20:06:38.470 -08 000000066 INF: ======================================
17-02-28 20:06:38.471 -08 000000098 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:06:38.473 -08 000000098 INF: ======================================
17-02-28 20:06:38.474 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:38.474 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:38.474 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:06:38.474 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:06:38.565 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:06:38.565 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:06:38.628 -08 000000070 INF: FPGA: Recv ZFREQCL
17-02-28 20:06:38.628 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:06:38.628 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:38.628 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:06:38.690 -08 000000010 INF: FPGA: Recv TDIYERD 6455104
17-02-28 20:06:38.690 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455104 counts (64.551 mm)
17-02-28 20:06:38.690 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:38.691 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:38.692 -08 000000098 INF: ===================TDI FPGA Arm===================
17-02-28 20:06:38.692 -08 000000066 INF: ===================Set YMotor gains for scans===================
17-02-28 20:06:38.692 -08 000000066 INF: ======================================
17-02-28 20:06:38.692 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:06:38.693 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:06:38.693 -08 000000098 INF: FPGA: Xmit TDIYPOS 6344177\n
17-02-28 20:06:38.752 -08 000000051 INF: FPGA: Recv TDIYPOS
17-02-28 20:06:38.752 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:06:38.753 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:06:38.754 -08 000000098 INF: FPGA: Xmit TDIYARM3 139264 6435102 1 1\n
17-02-28 20:06:38.814 -08 000000065 INF: FPGA: Recv TDIYARM3
17-02-28 20:06:38.814 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:06:38.815 -08 000000098 INF: ===================TDI FPGA Arm===================
17-02-28 20:06:38.816 -08 000000098 INF: ======================================
17-02-28 20:06:38.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:38.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:38.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:38.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:38.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:38.820 -08 000000092 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:06:38.820 -08 000000027 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:06:38.820 -08 000000092 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:06:38.820 -08 000000092 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:06:38.820 -08 000000092 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:06:38.820 -08 000000027 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:06:38.820 -08 000000092 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:06:38.820 -08 000000027 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:06:38.820 -08 000000027 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:06:38.821 -08 000000027 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:06:39.070 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:06:39.070 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 2 of 5 seconds left===================
17-02-28 20:06:39.189 -08 000000059 INF: FPGA: Recv EX2MV
17-02-28 20:06:39.189 -08 000000059 INF: FPGA: Recv EX1MV
17-02-28 20:06:39.189 -08 000000027 INF: Excitation Filter 1: Moved -107 steps in 369.0956 ms
17-02-28 20:06:39.189 -08 000000027 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.2344 ms
17-02-28 20:06:39.189 -08 000000092 INF: Excitation Filter 2: Moved -107 steps in 369.2919 ms
17-02-28 20:06:39.189 -08 000000092 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.4424 ms
17-02-28 20:06:39.189 -08 000000092 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.5135 ms
17-02-28 20:06:39.189 -08 000000027 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.3147 ms
17-02-28 20:06:39.189 -08 000000092 INF: ======================================
17-02-28 20:06:39.190 -08 000000027 INF: ======================================
17-02-28 20:06:39.191 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:39.192 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:39.192 -08 000000009 INF: ===================Camera TDI===================
17-02-28 20:06:39.192 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:39.193 -08 000000057 INF: ===================FPGA Z Wait===================
17-02-28 20:06:39.193 -08 000000073 INF: ===================Move Y Motor without settling===================
17-02-28 20:06:39.193 -08 000000073 INF: Y Motor: Moving to 14.9027 mm @6.500 mm/sec, started at 64.5510 mm
17-02-28 20:06:39.193 -08 000000073 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:06:39.193 -08 000000073 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:39.193 -08 000000009 INF: ===================Camera TDI, Parallel===================
17-02-28 20:06:39.193 -08 000000050 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:06:39.193 -08 000000050 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:06:39.194 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:06:39.194 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:06:39.195 -08 000000057 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:06:39.196 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:39.196 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:39.196 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:39.196 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:39.253 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:06:39.253 -08 000000073 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:06:39.253 -08 000000073 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:39.315 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:06:39.315 -08 000000073 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:39.346 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:39.346 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:39.346 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:39.346 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:39.377 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:06:39.377 -08 000000073 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:39.377 -08 000000073 INF: Y Motor: Set target position to 990268 encoder counts
17-02-28 20:06:39.377 -08 000000073 INF: Y Motor: Xmit s r0xca 990268\r
17-02-28 20:06:39.439 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:06:39.439 -08 000000073 INF: Y Motor: Start the move command
17-02-28 20:06:39.439 -08 000000073 INF: Y Motor: Xmit t 1\r
17-02-28 20:06:39.496 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:39.496 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:39.496 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:39.496 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:39.501 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:06:39.501 -08 000000073 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:06:39.501 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:39.564 -08 000000083 INF: FPGA: Recv ZWAIT 
17-02-28 20:06:39.564 -08 000000057 INF: ======================================
17-02-28 20:06:39.629 -08 000000073 INF: Y Motor: Unshifted Position: 5891301
17-02-28 20:06:39.646 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:06:39.646 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:06:39.646 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:06:39.646 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:06:39.646 -08 000000051 INF: ===================Camera #2 Frame #5===================
17-02-28 20:06:39.646 -08 000000100 INF: ===================Camera #0 Frame #5===================
17-02-28 20:06:39.679 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:39.805 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:39.811 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:06:39.811 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:06:39.811 -08 000000100 INF: ===================Camera #0 Frame #11===================
17-02-28 20:06:39.812 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:06:39.812 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:06:39.812 -08 000000051 INF: ===================Camera #2 Frame #11===================
17-02-28 20:06:39.938 -08 000000073 INF: Y Motor: Unshifted Position: 5689583
17-02-28 20:06:39.979 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:06:39.979 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:06:39.979 -08 000000100 INF: ===================Camera #0 Frame #17===================
17-02-28 20:06:39.981 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:06:39.981 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:06:39.981 -08 000000051 INF: ===================Camera #2 Frame #17===================
17-02-28 20:06:39.988 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:40.070 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:06:40.070 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 1 of 5 seconds left===================
17-02-28 20:06:40.115 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:40.147 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:06:40.147 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:06:40.147 -08 000000100 INF: ===================Camera #0 Frame #23===================
17-02-28 20:06:40.150 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:06:40.150 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:06:40.150 -08 000000051 INF: ===================Camera #2 Frame #23===================
17-02-28 20:06:40.252 -08 000000073 INF: Y Motor: Unshifted Position: 5485490
17-02-28 20:06:40.302 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:40.315 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:06:40.315 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:06:40.315 -08 000000100 INF: ===================Camera #0 Frame #29===================
17-02-28 20:06:40.319 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:06:40.319 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:06:40.319 -08 000000051 INF: ===================Camera #2 Frame #29===================
17-02-28 20:06:40.426 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:40.483 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:06:40.483 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:06:40.483 -08 000000100 INF: ===================Camera #0 Frame #35===================
17-02-28 20:06:40.488 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:06:40.488 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:06:40.488 -08 000000051 INF: ===================Camera #2 Frame #36===================
17-02-28 20:06:40.562 -08 000000073 INF: Y Motor: Unshifted Position: 5283764
17-02-28 20:06:40.612 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:40.651 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:06:40.651 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:06:40.651 -08 000000100 INF: ===================Camera #0 Frame #42===================
17-02-28 20:06:40.661 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:06:40.661 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:06:40.661 -08 000000051 INF: ===================Camera #2 Frame #42===================
17-02-28 20:06:40.739 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:40.823 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:06:40.823 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:06:40.883 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:06:40.883 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:06:40.883 -08 000000100 INF: ===================Camera #0 Frame #48===================
17-02-28 20:06:40.883 -08 000000051 INF: ===================Camera #2 Frame #50===================
17-02-28 20:06:40.885 -08 000000073 INF: Y Motor: Unshifted Position: 5080316
17-02-28 20:06:40.935 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:41.050 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:41.052 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:06:41.052 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:06:41.052 -08 000000100 INF: ===================Camera #0 Frame #56===================
17-02-28 20:06:41.059 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:06:41.059 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:06:41.059 -08 000000051 INF: ===================Camera #2 Frame #57===================
17-02-28 20:06:41.070 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:06:41.070 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:06:41.070 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:06:41.070 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:06:41.169 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:06:41.186 -08 000000073 INF: Y Motor: Unshifted Position: 4877944
17-02-28 20:06:41.227 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:06:41.227 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:06:41.227 -08 000000100 INF: ===================Camera #0 Frame #63===================
17-02-28 20:06:41.231 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:06:41.231 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:06:41.231 -08 000000051 INF: ===================Camera #2 Frame #63===================
17-02-28 20:06:41.236 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:41.247 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`2304 (0x03)\r\n(0xFF)
17-02-28 20:06:41.247 -08 000000018 INF: Current Position of Pump is: 2304
17-02-28 20:06:41.347 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:06:41.363 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:41.398 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:06:41.398 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:06:41.398 -08 000000100 INF: ===================Camera #0 Frame #69===================
17-02-28 20:06:41.400 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:06:41.400 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:06:41.400 -08 000000051 INF: ===================Camera #2 Frame #69===================
17-02-28 20:06:41.436 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`2304 (0x03)\r\n(0xFF)
17-02-28 20:06:41.436 -08 000000018 INF: Current Position of Pump is: 2304
17-02-28 20:06:41.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC===================
17-02-28 20:06:41.500 -08 000000073 INF: Y Motor: Unshifted Position: 4674498
17-02-28 20:06:41.536 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD2304R\r
17-02-28 20:06:41.550 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:41.566 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:06:41.566 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:06:41.566 -08 000000100 INF: ===================Camera #0 Frame #75===================
17-02-28 20:06:41.569 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:06:41.569 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:06:41.569 -08 000000051 INF: ===================Camera #2 Frame #75===================
17-02-28 20:06:41.623 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:41.675 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:41.723 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:41.734 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:06:41.734 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:06:41.734 -08 000000100 INF: ===================Camera #0 Frame #81===================
17-02-28 20:06:41.738 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:06:41.738 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:06:41.738 -08 000000051 INF: ===================Camera #2 Frame #82===================
17-02-28 20:06:41.812 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:41.812 -08 000000073 INF: Y Motor: Unshifted Position: 4470826
17-02-28 20:06:41.862 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:41.902 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:06:41.902 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:06:41.902 -08 000000100 INF: ===================Camera #0 Frame #88===================
17-02-28 20:06:41.910 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:06:41.910 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:06:41.910 -08 000000051 INF: ===================Camera #2 Frame #88===================
17-02-28 20:06:41.986 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:42.062 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:42.073 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:06:42.073 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:06:42.073 -08 000000100 INF: ===================Camera #0 Frame #94===================
17-02-28 20:06:42.079 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:06:42.079 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:06:42.079 -08 000000051 INF: ===================Camera #2 Frame #94===================
17-02-28 20:06:42.121 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:42.122 -08 000000073 INF: Y Motor: Unshifted Position: 4269325
17-02-28 20:06:42.172 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:42.242 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:06:42.242 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:06:42.242 -08 000000100 INF: ===================Camera #0 Frame #100===================
17-02-28 20:06:42.248 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:06:42.248 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:06:42.248 -08 000000051 INF: ===================Camera #2 Frame #100===================
17-02-28 20:06:42.299 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:42.371 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:42.411 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:06:42.411 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:06:42.411 -08 000000100 INF: ===================Camera #0 Frame #106===================
17-02-28 20:06:42.417 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:06:42.417 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:06:42.417 -08 000000051 INF: ===================Camera #2 Frame #107===================
17-02-28 20:06:42.434 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:06:42.434 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:06:42.434 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:06:42.435 -08 000000073 INF: Y Motor: Unshifted Position: 4065647
17-02-28 20:06:42.485 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:42.580 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:06:42.580 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:06:42.580 -08 000000100 INF: ===================Camera #0 Frame #113===================
17-02-28 20:06:42.589 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:06:42.589 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:06:42.589 -08 000000051 INF: ===================Camera #2 Frame #113===================
17-02-28 20:06:42.609 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:42.748 -08 000000073 INF: Y Motor: Unshifted Position: 3861984
17-02-28 20:06:42.752 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:06:42.752 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:06:42.752 -08 000000100 INF: ===================Camera #0 Frame #119===================
17-02-28 20:06:42.758 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:06:42.758 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:06:42.758 -08 000000051 INF: ===================Camera #2 Frame #119===================
17-02-28 20:06:42.798 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:42.920 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:06:42.920 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:06:42.920 -08 000000100 INF: ===================Camera #0 Frame #125===================
17-02-28 20:06:42.922 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:42.927 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:06:42.927 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:06:42.927 -08 000000051 INF: ===================Camera #2 Frame #125===================
17-02-28 20:06:43.058 -08 000000073 INF: Y Motor: Unshifted Position: 3660481
17-02-28 20:06:43.089 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:06:43.089 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:06:43.089 -08 000000100 INF: ===================Camera #0 Frame #131===================
17-02-28 20:06:43.096 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:06:43.096 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:06:43.096 -08 000000051 INF: ===================Camera #2 Frame #132===================
17-02-28 20:06:43.108 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:43.235 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:43.258 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:06:43.258 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:06:43.258 -08 000000100 INF: ===================Camera #0 Frame #138===================
17-02-28 20:06:43.269 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:06:43.269 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:06:43.269 -08 000000051 INF: ===================Camera #2 Frame #138===================
17-02-28 20:06:43.373 -08 000000073 INF: Y Motor: Unshifted Position: 3456825
17-02-28 20:06:43.423 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:43.430 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:06:43.430 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:06:43.430 -08 000000100 INF: ===================Camera #0 Frame #144===================
17-02-28 20:06:43.438 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:06:43.438 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:06:43.438 -08 000000051 INF: ===================Camera #2 Frame #144===================
17-02-28 20:06:43.534 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:06:43.545 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:43.599 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:06:43.599 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:06:43.599 -08 000000100 INF: ===================Camera #0 Frame #150===================
17-02-28 20:06:43.607 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:06:43.607 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:06:43.607 -08 000000051 INF: ===================Camera #2 Frame #150===================
17-02-28 20:06:43.621 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:43.684 -08 000000073 INF: Y Motor: Unshifted Position: 3253368
17-02-28 20:06:43.721 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:43.734 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:43.745 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:06:43.768 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:06:43.768 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:06:43.768 -08 000000100 INF: ===================Camera #0 Frame #156===================
17-02-28 20:06:43.776 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:06:43.776 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:06:43.776 -08 000000051 INF: ===================Camera #2 Frame #157===================
17-02-28 20:06:43.858 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:43.937 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:06:43.937 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:06:43.937 -08 000000100 INF: ===================Camera #0 Frame #163===================
17-02-28 20:06:43.949 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:06:43.949 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:06:43.949 -08 000000051 INF: ===================Camera #2 Frame #163===================
17-02-28 20:06:43.994 -08 000000073 INF: Y Motor: Unshifted Position: 3051653
17-02-28 20:06:43.995 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:06:44.044 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:44.055 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:06:44.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:44.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:06:44.109 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:06:44.109 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:06:44.109 -08 000000100 INF: ===================Camera #0 Frame #169===================
17-02-28 20:06:44.119 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:06:44.119 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:06:44.119 -08 000000051 INF: ===================Camera #2 Frame #169===================
17-02-28 20:06:44.171 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:44.279 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:06:44.279 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:06:44.279 -08 000000100 INF: ===================Camera #0 Frame #175===================
17-02-28 20:06:44.290 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:06:44.290 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:06:44.290 -08 000000051 INF: ===================Camera #2 Frame #176===================
17-02-28 20:06:44.308 -08 000000073 INF: Y Motor: Unshifted Position: 2847559
17-02-28 20:06:44.358 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:44.429 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:44.430 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:44.430 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:44.431 -08 000000018 INF: WaitCommand(30000) start
17-02-28 20:06:44.431 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 30 of 30 seconds left===================
17-02-28 20:06:44.449 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:06:44.449 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:06:44.449 -08 000000100 INF: ===================Camera #0 Frame #181===================
17-02-28 20:06:44.463 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:06:44.463 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:06:44.463 -08 000000051 INF: ===================Camera #2 Frame #182===================
17-02-28 20:06:44.482 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:44.618 -08 000000073 INF: Y Motor: Unshifted Position: 2645844
17-02-28 20:06:44.619 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:06:44.619 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:06:44.619 -08 000000100 INF: ===================Camera #0 Frame #188===================
17-02-28 20:06:44.633 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:06:44.633 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:06:44.633 -08 000000051 INF: ===================Camera #2 Frame #188===================
17-02-28 20:06:44.668 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:44.792 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:06:44.792 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:06:44.792 -08 000000100 INF: ===================Camera #0 Frame #194===================
17-02-28 20:06:44.795 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:44.804 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:06:44.804 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:06:44.804 -08 000000051 INF: ===================Camera #2 Frame #195===================
17-02-28 20:06:44.931 -08 000000073 INF: Y Motor: Unshifted Position: 2442405
17-02-28 20:06:44.962 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:06:44.962 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:06:44.962 -08 000000100 INF: ===================Camera #0 Frame #200===================
17-02-28 20:06:44.978 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:06:44.978 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:06:44.978 -08 000000051 INF: ===================Camera #2 Frame #201===================
17-02-28 20:06:44.981 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:45.105 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:45.132 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:06:45.132 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:06:45.133 -08 000000100 INF: ===================Camera #0 Frame #207===================
17-02-28 20:06:45.149 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:06:45.149 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:06:45.149 -08 000000051 INF: ===================Camera #2 Frame #207===================
17-02-28 20:06:45.242 -08 000000073 INF: Y Motor: Unshifted Position: 2240684
17-02-28 20:06:45.292 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:45.306 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:06:45.306 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:06:45.306 -08 000000100 INF: ===================Camera #0 Frame #213===================
17-02-28 20:06:45.320 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:06:45.320 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:06:45.320 -08 000000051 INF: ===================Camera #2 Frame #214===================
17-02-28 20:06:45.419 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:45.431 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:45.431 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 29 of 30 seconds left===================
17-02-28 20:06:45.476 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:06:45.476 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:06:45.476 -08 000000100 INF: ===================Camera #0 Frame #219===================
17-02-28 20:06:45.494 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:06:45.494 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:06:45.494 -08 000000051 INF: ===================Camera #2 Frame #220===================
17-02-28 20:06:45.555 -08 000000073 INF: Y Motor: Unshifted Position: 2036584
17-02-28 20:06:45.605 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:45.646 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:06:45.646 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:06:45.646 -08 000000100 INF: ===================Camera #0 Frame #226===================
17-02-28 20:06:45.664 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:06:45.664 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:06:45.664 -08 000000051 INF: ===================Camera #2 Frame #226===================
17-02-28 20:06:45.729 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:45.819 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:06:45.819 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:06:45.819 -08 000000100 INF: ===================Camera #0 Frame #232===================
17-02-28 20:06:45.834 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:06:45.834 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:06:45.834 -08 000000051 INF: ===================Camera #2 Frame #232===================
17-02-28 20:06:45.869 -08 000000073 INF: Y Motor: Unshifted Position: 1834868
17-02-28 20:06:45.919 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:45.989 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:06:45.989 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:06:45.989 -08 000000100 INF: ===================Camera #0 Frame #238===================
17-02-28 20:06:46.004 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:06:46.004 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:06:46.004 -08 000000051 INF: ===================Camera #2 Frame #239===================
17-02-28 20:06:46.043 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:46.158 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:06:46.158 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:06:46.158 -08 000000100 INF: ===================Camera #0 Frame #244===================
17-02-28 20:06:46.179 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:06:46.179 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:06:46.179 -08 000000051 INF: ===================Camera #2 Frame #245===================
17-02-28 20:06:46.180 -08 000000073 INF: Y Motor: Unshifted Position: 1630760
17-02-28 20:06:46.230 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:46.329 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:06:46.329 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:06:46.329 -08 000000100 INF: ===================Camera #0 Frame #251===================
17-02-28 20:06:46.350 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:06:46.350 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:06:46.350 -08 000000051 INF: ===================Camera #2 Frame #251===================
17-02-28 20:06:46.356 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:46.432 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:46.432 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 28 of 30 seconds left===================
17-02-28 20:06:46.492 -08 000000073 INF: Y Motor: Unshifted Position: 1427743
17-02-28 20:06:46.502 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:06:46.502 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:06:46.502 -08 000000100 INF: ===================Camera #0 Frame #257===================
17-02-28 20:06:46.520 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:06:46.520 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:06:46.520 -08 000000051 INF: ===================Camera #2 Frame #258===================
17-02-28 20:06:46.542 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:46.668 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:46.672 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:06:46.672 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:06:46.672 -08 000000100 INF: ===================Camera #0 Frame #263===================
17-02-28 20:06:46.693 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:06:46.693 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:06:46.693 -08 000000051 INF: ===================Camera #2 Frame #264===================
17-02-28 20:06:46.805 -08 000000073 INF: Y Motor: Unshifted Position: 1224937
17-02-28 20:06:46.842 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:06:46.842 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:06:46.842 -08 000000100 INF: ===================Camera #0 Frame #270===================
17-02-28 20:06:46.855 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:46.864 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:06:46.864 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:06:46.864 -08 000000051 INF: ===================Camera #2 Frame #270===================
17-02-28 20:06:46.927 -08 000000053 INF: FPGA: Recv TDIYWAIT
17-02-28 20:06:46.928 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:46.929 -08 000000050 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:06:46.930 -08 000000097 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:06:46.930 -08 000000083 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:06:46.930 -08 000000097 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:06:46.930 -08 000000097 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:06:46.930 -08 000000097 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:06:46.930 -08 000000083 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:06:46.930 -08 000000097 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:06:46.930 -08 000000083 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:06:46.930 -08 000000083 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:06:46.933 -08 000000083 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:06:46.979 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:47.015 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:06:47.015 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:06:47.015 -08 000000100 INF: ===================Camera #0 Frame #272===================
17-02-28 20:06:47.022 -08 000000100 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:06:47.023 -08 000000100 INF: ===================CameraTDI Cleanup===================
17-02-28 20:06:47.115 -08 000000073 INF: Y Motor: Unshifted Position: 1022572
17-02-28 20:06:47.165 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:47.186 -08 000000100 INF: Camera #0 ReleaseBuffer
17-02-28 20:06:47.186 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:06:47.186 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:06:47.186 -08 000000051 INF: ===================Camera #2 Frame #272===================
17-02-28 20:06:47.186 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:06:47.192 -08 000000051 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:06:47.193 -08 000000051 INF: ===================CameraTDI Cleanup===================
17-02-28 20:06:47.219 -08 000000100 INF: ======================================
17-02-28 20:06:47.300 -08 000000045 INF: FPGA: Recv EX1MV
17-02-28 20:06:47.300 -08 000000045 INF: FPGA: Recv EX2MV
17-02-28 20:06:47.300 -08 000000083 INF: Excitation Filter 2: Moved 107 steps in 369.3709 ms
17-02-28 20:06:47.300 -08 000000097 INF: Excitation Filter 1: Moved 107 steps in 369.558 ms
17-02-28 20:06:47.300 -08 000000097 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.7945 ms
17-02-28 20:06:47.300 -08 000000097 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.8655 ms
17-02-28 20:06:47.300 -08 000000083 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.5142 ms
17-02-28 20:06:47.300 -08 000000083 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.891 ms
17-02-28 20:06:47.300 -08 000000097 INF: ======================================
17-02-28 20:06:47.301 -08 000000083 INF: ======================================
17-02-28 20:06:47.302 -08 000000073 INF: Y Motor: Unshifted Position: 990269
17-02-28 20:06:47.302 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:06:47.302 -08 000000073 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:47.302 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:47.303 -08 000000050 INF: ======================================
17-02-28 20:06:47.364 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:06:47.364 -08 000000073 INF: Y Motor: Moved to 14.9027 after 7862 ms
17-02-28 20:06:47.364 -08 000000073 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:06:47.394 -08 000000051 INF: Camera #2 ReleaseBuffer
17-02-28 20:06:47.394 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:06:47.429 -08 000000073 INF: Y Motor: Recv v 4097\r
17-02-28 20:06:47.429 -08 000000073 INF: Y Motor: Status After move finished OK:
17-02-28 20:06:47.429 -08 000000073 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:47.431 -08 000000051 INF: ======================================
17-02-28 20:06:47.432 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:47.432 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 27 of 30 seconds left===================
17-02-28 20:06:47.432 -08 000000009 INF: ===================Camera TDI===================
17-02-28 20:06:47.433 -08 000000009 INF: ======================================
17-02-28 20:06:47.491 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:06:47.491 -08 000000073 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:47.491 -08 000000073 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:06:47.553 -08 000000073 INF: Y Motor: Recv v 134217728\r
17-02-28 20:06:47.553 -08 000000073 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:06:47.553 -08 000000073 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:06:47.553 -08 000000073 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:06:47.615 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:06:47.615 -08 000000073 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:06:47.615 -08 000000073 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:06:47.615 -08 000000073 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:47.677 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:06:47.677 -08 000000073 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:06:47.677 -08 000000073 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:47.739 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:06:47.739 -08 000000073 INF: ======================================
17-02-28 20:06:47.740 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:47.741 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:47.742 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:47.742 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:06:47.799 -08 000000045 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:06:47.799 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:06:47.865 -08 000000099 INF: FPGA: Recv TDIYERD 1490268
17-02-28 20:06:47.865 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:06:47.924 -08 000000077 INF: FPGA: Recv ZADCR 36132
17-02-28 20:06:47.924 -08 000000042 INF: At scan end Y pos = 14.903 and Z pos = -0.138. Y moved -48.539 mm
17-02-28 20:06:47.924 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:06:47.986 -08 000000085 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:06:47.986 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:06:47.986 -08 000000042 INF: TDIScan finished after 11950.8369 ms
17-02-28 20:06:47.986 -08 000000042 INF: Image[0]: Y should trigger at 63.442 mm, 2nd row was at 64.351 mm (error = 0.909 mm)
17-02-28 20:06:47.986 -08 000000042 INF: Image[2]: Y should trigger at 63.442 mm, 2nd row was at 64.351 mm (error = 0.909 mm)
17-02-28 20:06:47.988 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:48.018 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.745 um
17-02-28 20:06:48.018 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:48.019 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:06:48.051 -08 000000053 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:06:48.052 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:48.052 -08 000000099 INF: ===================Dither Clean Up Command===================
17-02-28 20:06:48.052 -08 000000065 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:06:48.052 -08 000000083 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:06:48.052 -08 000000081 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:06:48.053 -08 000000083 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:06:48.053 -08 000000083 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:06:48.053 -08 000000065 INF: ======================================
17-02-28 20:06:48.053 -08 000000081 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:06:48.053 -08 000000081 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:06:48.053 -08 000000093 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:06:48.053 -08 000000066 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:06:48.054 -08 000000066 INF: ======================================
17-02-28 20:06:48.054 -08 000000093 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:06:48.113 -08 000000090 INF: FPGA: Recv ZSTEP 
17-02-28 20:06:48.113 -08 000000090 INF: FPGA: Recv ZSEL 
17-02-28 20:06:48.113 -08 000000093 INF: FPGA: Xmit ZDACW 41433\n
17-02-28 20:06:48.113 -08 000000081 INF: ======================================
17-02-28 20:06:48.115 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:06:48.115 -08 000000083 INF: ======================================
17-02-28 20:06:48.175 -08 000000087 INF: FPGA: Recv ZDACW 
17-02-28 20:06:48.175 -08 000000093 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:06:48.175 -08 000000093 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:06:48.236 -08 000000070 INF: FPGA: Recv TDIBB
17-02-28 20:06:48.236 -08 000000093 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:06:48.237 -08 000000093 INF: ======================================
17-02-28 20:06:48.238 -08 000000099 INF: ======================================
17-02-28 20:06:48.239 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:48.240 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:06:48.240 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:48.240 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:06:48.240 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:48.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:06:48.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:48.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:06:48.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:48.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308===================
17-02-28 20:06:48.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308===================
17-02-28 20:06:48.242 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 27 of 30 seconds left, Waiting for image analysis===================
17-02-28 20:06:48.242 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 27 of 30 seconds left===================
17-02-28 20:06:48.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:06:48.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308===================
17-02-28 20:06:48.265 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:06:48.265 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:06:48.266 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308===================
17-02-28 20:06:48.266 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:48.266 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308===================
17-02-28 20:06:48.266 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:06:48.266 -08 000000042 INF: Transformed XStagePosition from 86.32964 mm to 86.308245619759 mm.
17-02-28 20:06:48.332 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5513643554887 mm.
17-02-28 20:06:48.332 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3513643554887 mm.
17-02-28 20:06:48.332 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4421143554887 mm.
17-02-28 20:06:48.338 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:48.339 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:06:48.339 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:48.339 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -158.1 um, section = G_1
17-02-28 20:06:48.343 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:48.344 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:48.347 -08 000000045 INF: ===================MoveEmissionFilters===================
17-02-28 20:06:48.349 -08 000000083 INF: ===================Move X,Y===================
17-02-28 20:06:48.350 -08 000000083 INF: ===================Move X,Y, Parallel===================
17-02-28 20:06:48.352 -08 000000020 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:06:48.352 -08 000000009 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1102 Request: {"Cycle":2,"Lane":7,"Tile":1102,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF224","HCSMMF246","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.352 -08 000000095 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:06:48.353 -08 000000086 INF: ===================Move X Motor without settling===================
17-02-28 20:06:48.353 -08 000000086 INF: X Motor: Xmit PR VM\n
17-02-28 20:06:48.353 -08 000000027 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:06:48.354 -08 000000095 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:06:48.354 -08 000000074 INF: ===================Move Y Motor without settling===================
17-02-28 20:06:48.354 -08 000000020 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:06:48.354 -08 000000095 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:06:48.354 -08 000000027 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:06:48.354 -08 000000074 INF: Y Motor: Moving to 64.5514 mm @25.000 mm/sec, started at 14.9027 mm
17-02-28 20:06:48.355 -08 000000074 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:06:48.355 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:48.355 -08 000000095 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:06:48.358 -08 000000095 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:06:48.360 -08 000000084 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:06:48.361 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:06:48.361 -08 000000094 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:06:48.361 -08 000000097 INF: ===================TDI Scan Setup===================
17-02-28 20:06:48.361 -08 000000084 INF: ======================================
17-02-28 20:06:48.362 -08 000000038 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:06:48.362 -08 000000038 INF: ======================================
17-02-28 20:06:48.362 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:06:48.363 -08 000000094 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:06:48.363 -08 000000097 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:48.364 -08 000000004 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:06:48.364 -08 000000004 INF: ======================================
17-02-28 20:06:48.364 -08 000000084 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:06:48.365 -08 000000038 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:06:48.365 -08 000000097 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:06:48.365 -08 000000084 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:06:48.365 -08 000000091 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:06:48.365 -08 000000066 INF: ===================Camera Arm TDI===================
17-02-28 20:06:48.366 -08 000000084 INF: ======================================
17-02-28 20:06:48.366 -08 000000027 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:06:48.366 -08 000000004 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:06:48.367 -08 000000004 INF: ======================================
17-02-28 20:06:48.367 -08 000000097 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:06:48.368 -08 000000066 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:06:48.368 -08 000000097 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:06:48.369 -08 000000038 INF: ======================================
17-02-28 20:06:48.369 -08 000000091 INF: ======================================
17-02-28 20:06:48.370 -08 000000027 INF: ======================================
17-02-28 20:06:48.370 -08 000000066 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:06:48.370 -08 000000020 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:06:48.372 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:06:48.373 -08 000000020 INF: ======================================
17-02-28 20:06:48.375 -08 000000059 INF: ======================================
17-02-28 20:06:48.375 -08 000000070 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:06:48.376 -08 000000070 INF: ======================================
17-02-28 20:06:48.380 -08 000000094 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:06:48.384 -08 000000094 INF: ======================================
17-02-28 20:06:48.387 -08 000000045 INF: ======================================
17-02-28 20:06:48.427 -08 000000025 INF: FPGA: Recv ZSEL 
17-02-28 20:06:48.430 -08 000000097 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:06:48.431 -08 000000097 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:06:48.431 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:06:48.433 -08 000000074 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:06:48.433 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:48.434 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:48.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 26 of 30 seconds left===================
17-02-28 20:06:48.438 -08 000000086 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:06:48.439 -08 000000086 INF: X Motor: Xmit PR VI\n
17-02-28 20:06:48.461 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1104 Request: {"Cycle":2,"Lane":7,"Tile":1104,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF198","HCSMMF269","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.463 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1103 Request: {"Cycle":2,"Lane":7,"Tile":1103,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF187","HCSMMF179","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.465 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1109 Request: {"Cycle":2,"Lane":7,"Tile":1109,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF225","HCSMMF231","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.467 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1106 Request: {"Cycle":2,"Lane":7,"Tile":1106,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF254","HCSMMF189","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.469 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1107 Request: {"Cycle":2,"Lane":7,"Tile":1107,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF209","HCSMMF191","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.470 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1110 Request: {"Cycle":2,"Lane":7,"Tile":1110,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF200","HCSMMF263","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.470 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1101 Request: {"Cycle":2,"Lane":7,"Tile":1101,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF250","HCSMMF215","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.472 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1112 Request: {"Cycle":2,"Lane":7,"Tile":1112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF195","HCSMMF212","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.473 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1105 Request: {"Cycle":2,"Lane":7,"Tile":1105,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF201","HCSMMF271","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.474 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1113 Request: {"Cycle":2,"Lane":7,"Tile":1113,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF214","HCSMMF257","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.476 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1108 Request: {"Cycle":2,"Lane":7,"Tile":1108,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF283","HCSMMF178","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.476 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1111 Request: {"Cycle":2,"Lane":7,"Tile":1111,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF239","HCSMMF193","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.477 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1118 Request: {"Cycle":2,"Lane":7,"Tile":1118,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF217","HCSMMF177","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.478 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1115 Request: {"Cycle":2,"Lane":7,"Tile":1115,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF270","HCSMMF258","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.479 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1117 Request: {"Cycle":2,"Lane":7,"Tile":1117,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF208","HCSMMF202","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.480 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1125 Request: {"Cycle":2,"Lane":7,"Tile":1125,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF182","HCSMMF226","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.481 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1119 Request: {"Cycle":2,"Lane":7,"Tile":1119,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF234","HCSMMF256","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.482 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1120 Request: {"Cycle":2,"Lane":7,"Tile":1120,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF229","HCSMMF274","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.483 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1124 Request: {"Cycle":2,"Lane":7,"Tile":1124,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF205","HCSMMF247","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.484 -08 000000103 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1127 Request: {"Cycle":2,"Lane":7,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF272","HCSMMF275","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.485 -08 000000092 INF: FPGA: Recv TDIBB
17-02-28 20:06:48.485 -08 000000097 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:06:48.486 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1126 Request: {"Cycle":2,"Lane":7,"Tile":1126,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF213","HCSMMF222","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.487 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:06:48.487 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:48.487 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1122 Request: {"Cycle":2,"Lane":7,"Tile":1122,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF185","HCSMMF190","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.487 -08 000000086 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:06:48.487 -08 000000086 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:06:48.487 -08 000000086 INF: X Motor: Moving to 86.3082 mm @15.000 mm/sec, started at 85.2085 mm
17-02-28 20:06:48.487 -08 000000086 INF: X Motor: Xmit MA 11185\n
17-02-28 20:06:48.487 -08 000000097 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:06:48.488 -08 000000097 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:48.488 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1116 Request: {"Cycle":2,"Lane":7,"Tile":1116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF241","HCSMMF260","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.488 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1123 Request: {"Cycle":2,"Lane":7,"Tile":1123,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF265","HCSMMF287","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.489 -08 000000097 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:06:48.489 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1128 Request: {"Cycle":2,"Lane":7,"Tile":1128,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF196","HCSMMF194","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.489 -08 000000097 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:06:48.489 -08 000000097 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:06:48.490 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1114 Request: {"Cycle":2,"Lane":7,"Tile":1114,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF266","HCSMMF188","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.491 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1121 Request: {"Cycle":2,"Lane":7,"Tile":1121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF218","HCSMMF223","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:06:48.493 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:48.500 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:06:48.550 -08 000000070 INF: FPGA: Recv ZSTEP 
17-02-28 20:06:48.550 -08 000000097 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:48.552 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:06:48.552 -08 000000086 INF: X Motor: Recv MA 11185\r\n>
17-02-28 20:06:48.552 -08 000000074 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:48.552 -08 000000097 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:06:48.552 -08 000000086 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:06:48.552 -08 000000074 INF: Y Motor: Set target position to 5955136 encoder counts
17-02-28 20:06:48.552 -08 000000074 INF: Y Motor: Xmit s r0xca 5955136\r
17-02-28 20:06:48.553 -08 000000097 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:48.554 -08 000000097 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:06:48.554 -08 000000097 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:06:48.554 -08 000000097 INF: Z Motor: Arming to move to -0.1181 mm
17-02-28 20:06:48.554 -08 000000097 INF: FPGA: Xmit ZYT 6435136 4\n
17-02-28 20:06:48.593 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:48.593 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:06:48.612 -08 000000068 INF: FPGA: Recv ZYT 
17-02-28 20:06:48.612 -08 000000097 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490269 enc / 14.903 mm / ) = 6435136 enc / 64.351 mm
17-02-28 20:06:48.612 -08 000000097 INF: FPGA: Xmit ZARM 30947\n
17-02-28 20:06:48.614 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:06:48.614 -08 000000074 INF: Y Motor: Start the move command
17-02-28 20:06:48.614 -08 000000074 INF: Y Motor: Xmit t 1\r
17-02-28 20:06:48.631 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:48.637 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:06:48.674 -08 000000073 INF: FPGA: Recv ZARM
17-02-28 20:06:48.674 -08 000000097 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0157 ms
17-02-28 20:06:48.674 -08 000000097 INF: Z Motor: ArmAbsStepped took 119.6276 ms
17-02-28 20:06:48.674 -08 000000097 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:06:48.676 -08 000000097 INF: ===================TDI Scan Setup===================
17-02-28 20:06:48.677 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:06:48.677 -08 000000074 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:06:48.677 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:48.677 -08 000000097 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:06:48.678 -08 000000097 INF: ===================TDI Scan Setup===================
17-02-28 20:06:48.679 -08 000000097 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:06:48.679 -08 000000097 INF: ===================TDI Scan Setup===================
17-02-28 20:06:48.681 -08 000000097 INF: ======================================
17-02-28 20:06:48.734 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:48.740 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:06:48.800 -08 000000074 INF: Y Motor: Unshifted Position: 1071758
17-02-28 20:06:48.833 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:48.839 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:06:48.850 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:48.925 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:06:48.974 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:48.989 -08 000000066 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:06:48.989 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:06:48.990 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:06:49.005 -08 000000066 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:06:49.007 -08 000000066 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:06:49.113 -08 000000074 INF: Y Motor: Unshifted Position: 1779434
17-02-28 20:06:49.163 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:49.175 -08 000000086 INF: X Motor: Xmit PR ER\n
17-02-28 20:06:49.205 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:06:49.237 -08 000000086 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:06:49.237 -08 000000086 INF: X Motor: Moved to 86.3071 after 685 ms
17-02-28 20:06:49.237 -08 000000086 INF: ======================================
17-02-28 20:06:49.287 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:49.423 -08 000000074 INF: Y Motor: Unshifted Position: 2554453
17-02-28 20:06:49.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:49.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 25 of 30 seconds left===================
17-02-28 20:06:49.473 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:49.600 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:49.630 -08 000000066 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:06:49.630 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:06:49.630 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:06:49.645 -08 000000066 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:06:49.647 -08 000000066 INF: ===================Camera Arm TDI===================
17-02-28 20:06:49.648 -08 000000066 INF: ======================================
17-02-28 20:06:49.650 -08 000000095 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:06:49.651 -08 000000095 INF: ======================================
17-02-28 20:06:49.737 -08 000000074 INF: Y Motor: Unshifted Position: 3337725
17-02-28 20:06:49.787 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:49.912 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:50.049 -08 000000074 INF: Y Motor: Unshifted Position: 4120307
17-02-28 20:06:50.099 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:50.223 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:50.361 -08 000000074 INF: Y Motor: Unshifted Position: 4896071
17-02-28 20:06:50.411 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:50.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:50.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 24 of 30 seconds left===================
17-02-28 20:06:50.536 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:50.672 -08 000000074 INF: Y Motor: Unshifted Position: 5677367
17-02-28 20:06:50.722 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:50.847 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:50.985 -08 000000074 INF: Y Motor: Unshifted Position: 5955138
17-02-28 20:06:50.985 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:06:50.985 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:51.047 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:06:51.047 -08 000000074 INF: Y Motor: Moved to 64.5514 after 2370 ms
17-02-28 20:06:51.047 -08 000000074 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:06:51.109 -08 000000074 INF: Y Motor: Recv v 4096\r
17-02-28 20:06:51.109 -08 000000074 INF: Y Motor: Status After move finished OK:
17-02-28 20:06:51.109 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:51.171 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:06:51.171 -08 000000074 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:51.171 -08 000000074 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:06:51.233 -08 000000074 INF: Y Motor: Recv v 402653184\r
17-02-28 20:06:51.233 -08 000000074 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:06:51.233 -08 000000074 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:06:51.233 -08 000000074 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:06:51.296 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:06:51.296 -08 000000074 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:06:51.296 -08 000000074 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:06:51.296 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:51.358 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:06:51.358 -08 000000074 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:06:51.358 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:51.420 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:06:51.420 -08 000000074 INF: ======================================
17-02-28 20:06:51.421 -08 000000083 INF: ===================Move X,Y===================
17-02-28 20:06:51.422 -08 000000083 INF: ======================================
17-02-28 20:06:51.423 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:06:51.424 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:51.424 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:06:51.424 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:06:51.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:51.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 23 of 30 seconds left===================
17-02-28 20:06:51.485 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:06:51.485 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:06:51.545 -08 000000070 INF: FPGA: Recv ZFREQCL
17-02-28 20:06:51.545 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:06:51.546 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:51.546 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:06:51.607 -08 000000073 INF: FPGA: Recv TDIYERD 6455138
17-02-28 20:06:51.607 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455138 counts (64.551 mm)
17-02-28 20:06:51.608 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:51.608 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:51.609 -08 000000057 INF: ===================TDI FPGA Arm===================
17-02-28 20:06:51.609 -08 000000068 INF: ===================Set YMotor gains for scans===================
17-02-28 20:06:51.609 -08 000000068 INF: ======================================
17-02-28 20:06:51.609 -08 000000057 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:06:51.610 -08 000000057 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:06:51.610 -08 000000057 INF: FPGA: Xmit TDIYPOS 6344211\n
17-02-28 20:06:51.669 -08 000000074 INF: FPGA: Recv TDIYPOS
17-02-28 20:06:51.670 -08 000000057 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:06:51.671 -08 000000057 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:06:51.671 -08 000000057 INF: FPGA: Xmit TDIYARM3 139264 6435136 1 1\n
17-02-28 20:06:51.731 -08 000000081 INF: FPGA: Recv TDIYARM3
17-02-28 20:06:51.731 -08 000000057 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:06:51.732 -08 000000057 INF: ===================TDI FPGA Arm===================
17-02-28 20:06:51.733 -08 000000057 INF: ======================================
17-02-28 20:06:51.734 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:06:51.735 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:06:51.735 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:51.736 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:51.736 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:51.737 -08 000000054 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:06:51.737 -08 000000009 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:06:51.737 -08 000000054 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:06:51.737 -08 000000054 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:06:51.737 -08 000000054 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:06:51.737 -08 000000009 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:06:51.737 -08 000000054 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:06:51.737 -08 000000009 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:06:51.737 -08 000000009 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:06:51.740 -08 000000009 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:06:52.106 -08 000000096 INF: FPGA: Recv EX2MV
17-02-28 20:06:52.106 -08 000000096 INF: FPGA: Recv EX1MV
17-02-28 20:06:52.106 -08 000000009 INF: Excitation Filter 1: Moved -107 steps in 368.4041 ms
17-02-28 20:06:52.106 -08 000000054 INF: Excitation Filter 2: Moved -107 steps in 368.6551 ms
17-02-28 20:06:52.106 -08 000000009 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.66 ms
17-02-28 20:06:52.106 -08 000000009 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.7307 ms
17-02-28 20:06:52.106 -08 000000054 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.7577 ms
17-02-28 20:06:52.106 -08 000000054 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.9291 ms
17-02-28 20:06:52.106 -08 000000054 INF: ======================================
17-02-28 20:06:52.106 -08 000000009 INF: ======================================
17-02-28 20:06:52.108 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:52.109 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:06:52.110 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:06:52.110 -08 000000097 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:52.110 -08 000000059 INF: ===================FPGA Z Wait===================
17-02-28 20:06:52.110 -08 000000023 INF: ===================Move Y Motor without settling===================
17-02-28 20:06:52.110 -08 000000059 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:06:52.110 -08 000000023 INF: Y Motor: Moving to 14.9030 mm @6.500 mm/sec, started at 64.5514 mm
17-02-28 20:06:52.110 -08 000000023 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:06:52.110 -08 000000023 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:06:52.110 -08 000000089 INF: ===================Camera TDI, Parallel===================
17-02-28 20:06:52.111 -08 000000097 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:06:52.111 -08 000000097 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:06:52.111 -08 000000020 INF: ===================Camera TDI===================
17-02-28 20:06:52.111 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:06:52.113 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:52.113 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:52.115 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:52.115 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:52.170 -08 000000023 INF: Y Motor: Recv ok\r
17-02-28 20:06:52.170 -08 000000023 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:06:52.170 -08 000000023 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:06:52.232 -08 000000023 INF: Y Motor: Recv ok\r
17-02-28 20:06:52.232 -08 000000023 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:06:52.263 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:52.263 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:52.265 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:52.265 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:52.294 -08 000000023 INF: Y Motor: Recv v 0\r
17-02-28 20:06:52.294 -08 000000023 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:06:52.294 -08 000000023 INF: Y Motor: Set target position to 990303 encoder counts
17-02-28 20:06:52.294 -08 000000023 INF: Y Motor: Xmit s r0xca 990303\r
17-02-28 20:06:52.356 -08 000000023 INF: Y Motor: Recv ok\r
17-02-28 20:06:52.356 -08 000000023 INF: Y Motor: Start the move command
17-02-28 20:06:52.356 -08 000000023 INF: Y Motor: Xmit t 1\r
17-02-28 20:06:52.413 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:52.413 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:52.415 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:06:52.415 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:06:52.418 -08 000000023 INF: Y Motor: Recv ok\r
17-02-28 20:06:52.418 -08 000000023 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:06:52.418 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:52.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:52.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 22 of 30 seconds left===================
17-02-28 20:06:52.481 -08 000000085 INF: FPGA: Recv ZWAIT 
17-02-28 20:06:52.481 -08 000000059 INF: ======================================
17-02-28 20:06:52.545 -08 000000023 INF: Y Motor: Unshifted Position: 5891546
17-02-28 20:06:52.563 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:06:52.563 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:06:52.563 -08 000000020 INF: ===================Camera #0 Frame #5===================
17-02-28 20:06:52.565 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:06:52.565 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:06:52.565 -08 000000050 INF: ===================Camera #2 Frame #5===================
17-02-28 20:06:52.595 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:52.719 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:52.728 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:06:52.728 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:06:52.728 -08 000000020 INF: ===================Camera #0 Frame #11===================
17-02-28 20:06:52.731 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:06:52.731 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:06:52.731 -08 000000050 INF: ===================Camera #2 Frame #11===================
17-02-28 20:06:52.855 -08 000000023 INF: Y Motor: Unshifted Position: 5689830
17-02-28 20:06:52.896 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:06:52.896 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:06:52.896 -08 000000020 INF: ===================Camera #0 Frame #17===================
17-02-28 20:06:52.900 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:06:52.900 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:06:52.900 -08 000000050 INF: ===================Camera #2 Frame #17===================
17-02-28 20:06:52.905 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:53.032 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:53.064 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:06:53.064 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:06:53.064 -08 000000020 INF: ===================Camera #0 Frame #23===================
17-02-28 20:06:53.069 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:06:53.069 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:06:53.069 -08 000000050 INF: ===================Camera #2 Frame #23===================
17-02-28 20:06:53.168 -08 000000023 INF: Y Motor: Unshifted Position: 5486175
17-02-28 20:06:53.218 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:53.232 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:06:53.232 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:06:53.232 -08 000000020 INF: ===================Camera #0 Frame #29===================
17-02-28 20:06:53.238 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:06:53.238 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:06:53.238 -08 000000050 INF: ===================Camera #2 Frame #29===================
17-02-28 20:06:53.344 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:53.400 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:06:53.400 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:06:53.400 -08 000000020 INF: ===================Camera #0 Frame #35===================
17-02-28 20:06:53.407 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:06:53.407 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:06:53.407 -08 000000050 INF: ===================Camera #2 Frame #36===================
17-02-28 20:06:53.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:53.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 21 of 30 seconds left===================
17-02-28 20:06:53.479 -08 000000023 INF: Y Motor: Unshifted Position: 5284022
17-02-28 20:06:53.529 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:53.568 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:06:53.568 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:06:53.568 -08 000000020 INF: ===================Camera #0 Frame #42===================
17-02-28 20:06:53.579 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:06:53.579 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:06:53.579 -08 000000050 INF: ===================Camera #2 Frame #42===================
17-02-28 20:06:53.656 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:53.741 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:06:53.741 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:06:53.741 -08 000000020 INF: ===================Camera #0 Frame #48===================
17-02-28 20:06:53.750 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:06:53.750 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:06:53.750 -08 000000050 INF: ===================Camera #2 Frame #48===================
17-02-28 20:06:53.792 -08 000000023 INF: Y Motor: Unshifted Position: 5080348
17-02-28 20:06:53.842 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:53.911 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:06:53.911 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:06:53.911 -08 000000020 INF: ===================Camera #0 Frame #54===================
17-02-28 20:06:53.921 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:06:53.921 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:06:53.921 -08 000000050 INF: ===================Camera #2 Frame #55===================
17-02-28 20:06:53.966 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:54.081 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:06:54.081 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:06:54.081 -08 000000020 INF: ===================Camera #0 Frame #60===================
17-02-28 20:06:54.095 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:06:54.095 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:06:54.095 -08 000000050 INF: ===================Camera #2 Frame #61===================
17-02-28 20:06:54.105 -08 000000023 INF: Y Motor: Unshifted Position: 4876903
17-02-28 20:06:54.155 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:54.251 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:06:54.251 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:06:54.251 -08 000000020 INF: ===================Camera #0 Frame #67===================
17-02-28 20:06:54.265 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:06:54.265 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:06:54.265 -08 000000050 INF: ===================Camera #2 Frame #67===================
17-02-28 20:06:54.279 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:54.415 -08 000000023 INF: Y Motor: Unshifted Position: 4675185
17-02-28 20:06:54.424 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:06:54.424 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:06:54.424 -08 000000020 INF: ===================Camera #0 Frame #73===================
17-02-28 20:06:54.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:54.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 20 of 30 seconds left===================
17-02-28 20:06:54.436 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:06:54.436 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:06:54.436 -08 000000050 INF: ===================Camera #2 Frame #74===================
17-02-28 20:06:54.465 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:54.592 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:54.594 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:06:54.594 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:06:54.594 -08 000000020 INF: ===================Camera #0 Frame #79===================
17-02-28 20:06:54.610 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:06:54.610 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:06:54.610 -08 000000050 INF: ===================Camera #2 Frame #80===================
17-02-28 20:06:54.728 -08 000000023 INF: Y Motor: Unshifted Position: 4471725
17-02-28 20:06:54.764 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:06:54.764 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:06:54.764 -08 000000020 INF: ===================Camera #0 Frame #86===================
17-02-28 20:06:54.778 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:54.782 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:06:54.782 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:06:54.782 -08 000000050 INF: ===================Camera #2 Frame #86===================
17-02-28 20:06:54.902 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:54.937 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:06:54.937 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:06:54.937 -08 000000020 INF: ===================Camera #0 Frame #92===================
17-02-28 20:06:54.953 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:06:54.953 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:06:54.953 -08 000000050 INF: ===================Camera #2 Frame #93===================
17-02-28 20:06:55.041 -08 000000023 INF: Y Motor: Unshifted Position: 4268061
17-02-28 20:06:55.091 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:55.107 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:06:55.107 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:06:55.107 -08 000000020 INF: ===================Camera #0 Frame #98===================
17-02-28 20:06:55.127 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:06:55.127 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:06:55.127 -08 000000050 INF: ===================Camera #2 Frame #99===================
17-02-28 20:06:55.217 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:55.277 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:06:55.277 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:06:55.277 -08 000000020 INF: ===================Camera #0 Frame #105===================
17-02-28 20:06:55.298 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:06:55.298 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:06:55.298 -08 000000050 INF: ===================Camera #2 Frame #105===================
17-02-28 20:06:55.352 -08 000000023 INF: Y Motor: Unshifted Position: 4066549
17-02-28 20:06:55.402 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:55.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:55.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 19 of 30 seconds left===================
17-02-28 20:06:55.451 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:06:55.451 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:06:55.451 -08 000000020 INF: ===================Camera #0 Frame #111===================
17-02-28 20:06:55.469 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:06:55.469 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:06:55.469 -08 000000050 INF: ===================Camera #2 Frame #112===================
17-02-28 20:06:55.526 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:55.621 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:06:55.621 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:06:55.621 -08 000000020 INF: ===================Camera #0 Frame #117===================
17-02-28 20:06:55.643 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:06:55.643 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:06:55.643 -08 000000050 INF: ===================Camera #2 Frame #118===================
17-02-28 20:06:55.665 -08 000000023 INF: Y Motor: Unshifted Position: 3862239
17-02-28 20:06:55.715 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:55.791 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:06:55.791 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:06:55.791 -08 000000020 INF: ===================Camera #0 Frame #123===================
17-02-28 20:06:55.814 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:06:55.814 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:06:55.814 -08 000000050 INF: ===================Camera #2 Frame #124===================
17-02-28 20:06:55.839 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:55.961 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:06:55.961 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:06:55.961 -08 000000020 INF: ===================Camera #0 Frame #130===================
17-02-28 20:06:55.975 -08 000000023 INF: Y Motor: Unshifted Position: 3660732
17-02-28 20:06:55.985 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:06:55.985 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:06:55.985 -08 000000050 INF: ===================Camera #2 Frame #131===================
17-02-28 20:06:56.025 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:56.134 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:06:56.134 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:06:56.134 -08 000000020 INF: ===================Camera #0 Frame #136===================
17-02-28 20:06:56.148 -08 000000094 INF: RunCopyService queue size at 2/28/2017 8:06:56 PM is 2
17-02-28 20:06:56.152 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:56.159 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:06:56.159 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:06:56.159 -08 000000050 INF: ===================Camera #2 Frame #137===================
17-02-28 20:06:56.290 -08 000000023 INF: Y Motor: Unshifted Position: 3456421
17-02-28 20:06:56.305 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:06:56.305 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:06:56.305 -08 000000020 INF: ===================Camera #0 Frame #142===================
17-02-28 20:06:56.329 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:06:56.329 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:06:56.329 -08 000000050 INF: ===================Camera #2 Frame #143===================
17-02-28 20:06:56.340 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:56.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:56.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 18 of 30 seconds left===================
17-02-28 20:06:56.465 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:56.475 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:06:56.475 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:06:56.475 -08 000000020 INF: ===================Camera #0 Frame #149===================
17-02-28 20:06:56.500 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:06:56.500 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:06:56.500 -08 000000050 INF: ===================Camera #2 Frame #150===================
17-02-28 20:06:56.603 -08 000000023 INF: Y Motor: Unshifted Position: 3254275
17-02-28 20:06:56.648 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:06:56.648 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:06:56.648 -08 000000020 INF: ===================Camera #0 Frame #155===================
17-02-28 20:06:56.653 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:56.674 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:06:56.674 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:06:56.674 -08 000000050 INF: ===================Camera #2 Frame #156===================
17-02-28 20:06:56.775 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:56.818 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:06:56.818 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:06:56.818 -08 000000020 INF: ===================Camera #0 Frame #161===================
17-02-28 20:06:56.845 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:06:56.845 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:06:56.845 -08 000000050 INF: ===================Camera #2 Frame #162===================
17-02-28 20:06:56.914 -08 000000023 INF: Y Motor: Unshifted Position: 3050606
17-02-28 20:06:56.964 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:56.988 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:06:56.988 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:06:56.988 -08 000000020 INF: ===================Camera #0 Frame #167===================
17-02-28 20:06:57.016 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:06:57.016 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:06:57.016 -08 000000050 INF: ===================Camera #2 Frame #169===================
17-02-28 20:06:57.088 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:57.158 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:06:57.158 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:06:57.158 -08 000000020 INF: ===================Camera #0 Frame #174===================
17-02-28 20:06:57.190 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:06:57.190 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:06:57.190 -08 000000050 INF: ===================Camera #2 Frame #175===================
17-02-28 20:06:57.224 -08 000000023 INF: Y Motor: Unshifted Position: 2848900
17-02-28 20:06:57.274 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:57.331 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:06:57.331 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:06:57.331 -08 000000020 INF: ===================Camera #0 Frame #180===================
17-02-28 20:06:57.361 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:06:57.361 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:06:57.361 -08 000000050 INF: ===================Camera #2 Frame #181===================
17-02-28 20:06:57.401 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:57.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:57.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 17 of 30 seconds left===================
17-02-28 20:06:57.501 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:06:57.501 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:06:57.501 -08 000000020 INF: ===================Camera #0 Frame #186===================
17-02-28 20:06:57.532 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:06:57.532 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:06:57.532 -08 000000050 INF: ===================Camera #2 Frame #188===================
17-02-28 20:06:57.538 -08 000000023 INF: Y Motor: Unshifted Position: 2644802
17-02-28 20:06:57.588 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:57.671 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:06:57.671 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:06:57.671 -08 000000020 INF: ===================Camera #0 Frame #193===================
17-02-28 20:06:57.706 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:06:57.706 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:06:57.706 -08 000000050 INF: ===================Camera #2 Frame #194===================
17-02-28 20:06:57.712 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:57.844 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:06:57.844 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:06:57.844 -08 000000020 INF: ===================Camera #0 Frame #199===================
17-02-28 20:06:57.848 -08 000000023 INF: Y Motor: Unshifted Position: 2443300
17-02-28 20:06:57.876 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:06:57.876 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:06:57.876 -08 000000050 INF: ===================Camera #2 Frame #200===================
17-02-28 20:06:57.898 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:58.013 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:06:58.013 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:06:58.013 -08 000000020 INF: ===================Camera #0 Frame #205===================
17-02-28 20:06:58.025 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:58.047 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:06:58.047 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:06:58.047 -08 000000050 INF: ===================Camera #2 Frame #206===================
17-02-28 20:06:58.161 -08 000000023 INF: Y Motor: Unshifted Position: 2239631
17-02-28 20:06:58.183 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:06:58.183 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:06:58.183 -08 000000020 INF: ===================Camera #0 Frame #211===================
17-02-28 20:06:58.211 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:58.218 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:06:58.218 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:06:58.218 -08 000000050 INF: ===================Camera #2 Frame #213===================
17-02-28 20:06:58.335 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:58.353 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:06:58.353 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:06:58.353 -08 000000020 INF: ===================Camera #0 Frame #218===================
17-02-28 20:06:58.392 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:06:58.392 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:06:58.392 -08 000000050 INF: ===================Camera #2 Frame #219===================
17-02-28 20:06:58.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:58.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 16 of 30 seconds left===================
17-02-28 20:06:58.474 -08 000000023 INF: Y Motor: Unshifted Position: 2036186
17-02-28 20:06:58.524 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:58.526 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:06:58.526 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:06:58.526 -08 000000020 INF: ===================Camera #0 Frame #224===================
17-02-28 20:06:58.563 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:06:58.563 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:06:58.563 -08 000000050 INF: ===================Camera #2 Frame #225===================
17-02-28 20:06:58.650 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:58.696 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:06:58.696 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:06:58.696 -08 000000020 INF: ===================Camera #0 Frame #230===================
17-02-28 20:06:58.734 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:06:58.734 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:06:58.734 -08 000000050 INF: ===================Camera #2 Frame #232===================
17-02-28 20:06:58.784 -08 000000023 INF: Y Motor: Unshifted Position: 1834469
17-02-28 20:06:58.834 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:58.866 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:06:58.866 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:06:58.866 -08 000000020 INF: ===================Camera #0 Frame #237===================
17-02-28 20:06:58.908 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:06:58.908 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:06:58.908 -08 000000050 INF: ===================Camera #2 Frame #238===================
17-02-28 20:06:58.961 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:59.039 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:06:59.039 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:06:59.039 -08 000000020 INF: ===================Camera #0 Frame #243===================
17-02-28 20:06:59.080 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:06:59.080 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:06:59.080 -08 000000050 INF: ===================Camera #2 Frame #245===================
17-02-28 20:06:59.097 -08 000000023 INF: Y Motor: Unshifted Position: 1630793
17-02-28 20:06:59.147 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:59.209 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:06:59.209 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:06:59.209 -08 000000020 INF: ===================Camera #0 Frame #249===================
17-02-28 20:06:59.253 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:06:59.253 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:06:59.253 -08 000000050 INF: ===================Camera #2 Frame #251===================
17-02-28 20:06:59.271 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:59.379 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:06:59.379 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:06:59.379 -08 000000020 INF: ===================Camera #0 Frame #256===================
17-02-28 20:06:59.408 -08 000000023 INF: Y Motor: Unshifted Position: 1427343
17-02-28 20:06:59.424 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:06:59.424 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:06:59.424 -08 000000050 INF: ===================Camera #2 Frame #257===================
17-02-28 20:06:59.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:06:59.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 15 of 30 seconds left===================
17-02-28 20:06:59.458 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:59.552 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:06:59.552 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:06:59.552 -08 000000020 INF: ===================Camera #0 Frame #262===================
17-02-28 20:06:59.585 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:59.595 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:06:59.595 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:06:59.595 -08 000000050 INF: ===================Camera #2 Frame #263===================
17-02-28 20:06:59.721 -08 000000023 INF: Y Motor: Unshifted Position: 1224969
17-02-28 20:06:59.722 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:06:59.722 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:06:59.722 -08 000000020 INF: ===================Camera #0 Frame #268===================
17-02-28 20:06:59.766 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:06:59.766 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:06:59.766 -08 000000050 INF: ===================Camera #2 Frame #270===================
17-02-28 20:06:59.771 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:59.843 -08 000000086 INF: FPGA: Recv TDIYWAIT
17-02-28 20:06:59.843 -08 000000097 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:06:59.845 -08 000000097 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:06:59.846 -08 000000004 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:06:59.846 -08 000000055 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:06:59.846 -08 000000004 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:06:59.846 -08 000000004 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:06:59.846 -08 000000004 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:06:59.846 -08 000000055 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:06:59.846 -08 000000004 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:06:59.846 -08 000000055 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:06:59.846 -08 000000055 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:06:59.847 -08 000000055 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:06:59.891 -08 000000020 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:06:59.891 -08 000000020 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:06:59.891 -08 000000020 INF: ===================Camera #0 Frame #272===================
17-02-28 20:06:59.895 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:06:59.904 -08 000000020 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:06:59.905 -08 000000020 INF: ===================CameraTDI Cleanup===================
17-02-28 20:07:00.034 -08 000000023 INF: Y Motor: Unshifted Position: 1020874
17-02-28 20:07:00.038 -08 000000020 INF: Camera #0 ReleaseBuffer
17-02-28 20:07:00.038 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:07:00.038 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:07:00.038 -08 000000020 INF: ===================Camera TDI===================
17-02-28 20:07:00.038 -08 000000050 INF: ===================Camera #2 Frame #272===================
17-02-28 20:07:00.045 -08 000000050 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:07:00.046 -08 000000050 INF: ===================CameraTDI Cleanup===================
17-02-28 20:07:00.069 -08 000000020 INF: ======================================
17-02-28 20:07:00.084 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:00.215 -08 000000050 INF: Camera #2 ReleaseBuffer
17-02-28 20:07:00.215 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:07:00.218 -08 000000102 INF: FPGA: Recv EX2MV
17-02-28 20:07:00.218 -08 000000102 INF: FPGA: Recv EX1MV
17-02-28 20:07:00.218 -08 000000055 INF: Excitation Filter 1: Moved 107 steps in 371.5045 ms
17-02-28 20:07:00.218 -08 000000004 INF: Excitation Filter 2: Moved 107 steps in 371.7104 ms
17-02-28 20:07:00.218 -08 000000055 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.6789 ms
17-02-28 20:07:00.218 -08 000000004 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8132 ms
17-02-28 20:07:00.218 -08 000000004 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.0222 ms
17-02-28 20:07:00.218 -08 000000055 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.823 ms
17-02-28 20:07:00.218 -08 000000004 INF: ======================================
17-02-28 20:07:00.219 -08 000000055 INF: ======================================
17-02-28 20:07:00.220 -08 000000023 INF: Y Motor: Unshifted Position: 990303
17-02-28 20:07:00.220 -08 000000023 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:07:00.220 -08 000000023 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:00.220 -08 000000097 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:00.221 -08 000000097 INF: ======================================
17-02-28 20:07:00.249 -08 000000050 INF: ======================================
17-02-28 20:07:00.250 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:07:00.251 -08 000000089 INF: ======================================
17-02-28 20:07:00.282 -08 000000023 INF: Y Motor: Recv v 0\r
17-02-28 20:07:00.282 -08 000000023 INF: Y Motor: Moved to 14.9030 after 7863 ms
17-02-28 20:07:00.282 -08 000000023 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:07:00.346 -08 000000023 INF: Y Motor: Recv v 4097\r
17-02-28 20:07:00.346 -08 000000023 INF: Y Motor: Status After move finished OK:
17-02-28 20:07:00.346 -08 000000023 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:00.406 -08 000000023 INF: Y Motor: Recv v 0\r
17-02-28 20:07:00.406 -08 000000023 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:00.406 -08 000000023 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:07:00.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:00.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 14 of 30 seconds left===================
17-02-28 20:07:00.471 -08 000000023 INF: Y Motor: Recv v 134217728\r
17-02-28 20:07:00.471 -08 000000023 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:07:00.471 -08 000000023 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:07:00.471 -08 000000023 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:07:00.533 -08 000000023 INF: Y Motor: Recv v 0\r
17-02-28 20:07:00.533 -08 000000023 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:07:00.533 -08 000000023 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:07:00.533 -08 000000023 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:00.595 -08 000000023 INF: Y Motor: Recv ok\r
17-02-28 20:07:00.595 -08 000000023 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:07:00.595 -08 000000023 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:00.657 -08 000000023 INF: Y Motor: Recv ok\r
17-02-28 20:07:00.657 -08 000000023 INF: ======================================
17-02-28 20:07:00.658 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:00.659 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:00.660 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:00.660 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:07:00.717 -08 000000010 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:07:00.717 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:07:00.779 -08 000000096 INF: FPGA: Recv TDIYERD 1490304
17-02-28 20:07:00.779 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:07:00.841 -08 000000040 INF: FPGA: Recv ZADCR 36173
17-02-28 20:07:00.841 -08 000000042 INF: At scan end Y pos = 14.903 and Z pos = -0.138. Y moved -48.539 mm
17-02-28 20:07:00.841 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:07:00.903 -08 000000053 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:07:00.903 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:07:00.903 -08 000000042 INF: TDIScan finished after 12636.1788 ms
17-02-28 20:07:00.903 -08 000000042 INF: Image[0]: Y should trigger at 63.442 mm, 2nd row was at 64.351 mm (error = 0.909 mm)
17-02-28 20:07:00.903 -08 000000042 INF: Image[2]: Y should trigger at 63.442 mm, 2nd row was at 64.351 mm (error = 0.909 mm)
17-02-28 20:07:00.905 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:00.939 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.635 um
17-02-28 20:07:00.939 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:00.940 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:07:00.969 -08 000000081 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:07:00.969 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:00.970 -08 000000101 INF: ===================Dither Clean Up Command===================
17-02-28 20:07:00.970 -08 000000054 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:07:00.970 -08 000000068 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:07:00.970 -08 000000086 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:07:00.970 -08 000000086 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:07:00.971 -08 000000054 INF: ======================================
17-02-28 20:07:00.971 -08 000000086 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:07:00.971 -08 000000068 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:07:00.971 -08 000000068 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:07:00.971 -08 000000059 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:07:00.971 -08 000000027 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:07:00.971 -08 000000027 INF: ======================================
17-02-28 20:07:00.972 -08 000000059 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:07:01.028 -08 000000036 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:01.028 -08 000000036 INF: FPGA: Recv ZSEL 
17-02-28 20:07:01.028 -08 000000059 INF: FPGA: Xmit ZDACW 41433\n
17-02-28 20:07:01.028 -08 000000086 INF: ======================================
17-02-28 20:07:01.030 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:07:01.030 -08 000000068 INF: ======================================
17-02-28 20:07:01.093 -08 000000032 INF: FPGA: Recv ZDACW 
17-02-28 20:07:01.093 -08 000000059 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:07:01.093 -08 000000059 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:07:01.155 -08 000000035 INF: FPGA: Recv TDIBB
17-02-28 20:07:01.155 -08 000000059 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:07:01.156 -08 000000059 INF: ======================================
17-02-28 20:07:01.157 -08 000000101 INF: ======================================
17-02-28 20:07:01.158 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:01.159 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:07:01.159 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:01.159 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:07:01.159 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:01.159 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:07:01.160 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:01.160 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:07:01.160 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:01.160 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308===================
17-02-28 20:07:01.160 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308===================
17-02-28 20:07:01.161 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 14 of 30 seconds left, Waiting for image analysis===================
17-02-28 20:07:01.161 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 14 of 30 seconds left===================
17-02-28 20:07:01.161 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:07:01.161 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308===================
17-02-28 20:07:01.184 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:07:01.184 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:07:01.184 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:01.185 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:07:01.185 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:07:01.185 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 7===================
17-02-28 20:07:01.186 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface===================
17-02-28 20:07:01.202 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:01.203 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:01.203 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:07:01.203 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:07:01.270 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1201 Request: {"Cycle":2,"Lane":7,"Tile":1201,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF216","HCSMMF194","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.273 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:07:01.274 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:01.275 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:07:01.275 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:07:01.437 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:01.437 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 13 of 30 seconds left===================
17-02-28 20:07:01.437 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1203 Request: {"Cycle":2,"Lane":7,"Tile":1203,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF218","HCSMMF287","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.439 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1207 Request: {"Cycle":2,"Lane":7,"Tile":1207,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF202","HCSMMF279","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.441 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1205 Request: {"Cycle":2,"Lane":7,"Tile":1205,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF189","HCSMMF265","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.444 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1209 Request: {"Cycle":2,"Lane":7,"Tile":1209,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF274","HCSMMF214","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.446 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1211 Request: {"Cycle":2,"Lane":7,"Tile":1211,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF217","HCSMMF258","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.449 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1204 Request: {"Cycle":2,"Lane":7,"Tile":1204,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF223","HCSMMF280","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.454 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1202 Request: {"Cycle":2,"Lane":7,"Tile":1202,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF284","HCSMMF188","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.457 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1210 Request: {"Cycle":2,"Lane":7,"Tile":1210,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF206","HCSMMF229","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.458 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1217 Request: {"Cycle":2,"Lane":7,"Tile":1217,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF272","HCSMMF271","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.459 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1212 Request: {"Cycle":2,"Lane":7,"Tile":1212,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF270","HCSMMF221","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.460 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1216 Request: {"Cycle":2,"Lane":7,"Tile":1216,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF281","HCSMMF263","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.462 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1213 Request: {"Cycle":2,"Lane":7,"Tile":1213,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF264","HCSMMF232","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.463 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1214 Request: {"Cycle":2,"Lane":7,"Tile":1214,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF273","HCSMMF200","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.464 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1208 Request: {"Cycle":2,"Lane":7,"Tile":1208,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF220","HCSMMF257","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.466 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1215 Request: {"Cycle":2,"Lane":7,"Tile":1215,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF185","HCSMMF198","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.467 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1218 Request: {"Cycle":2,"Lane":7,"Tile":1218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF240","HCSMMF201","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.468 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1220 Request: {"Cycle":2,"Lane":7,"Tile":1220,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF259","HCSMMF256","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.470 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1226 Request: {"Cycle":2,"Lane":7,"Tile":1226,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF234","HCSMMF276","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.470 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1224 Request: {"Cycle":2,"Lane":7,"Tile":1224,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF251","HCSMMF285","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.471 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1222 Request: {"Cycle":2,"Lane":7,"Tile":1222,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF192","HCSMMF181","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.473 -08 000000004 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1223 Request: {"Cycle":2,"Lane":7,"Tile":1223,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF191","HCSMMF243","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.474 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1225 Request: {"Cycle":2,"Lane":7,"Tile":1225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF260","HCSMMF211","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.475 -08 000000009 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1219 Request: {"Cycle":2,"Lane":7,"Tile":1219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF178","HCSMMF242","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.477 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1221 Request: {"Cycle":2,"Lane":7,"Tile":1221,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF275","HCSMMF241","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.478 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1228 Request: {"Cycle":2,"Lane":7,"Tile":1228,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF245","HCSMMF278","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.480 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1206 Request: {"Cycle":2,"Lane":7,"Tile":1206,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF235","HCSMMF193","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.483 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 1227 Request: {"Cycle":2,"Lane":7,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF187","HCSMMF239","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:01.486 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:01.492 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:07:01.576 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:01.576 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:07:01.612 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:01.618 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:07:01.669 -08 000000090 INF: FPGA: Recv MIOCOMPR
17-02-28 20:07:01.669 -08 000000042 INF: Compensator: Moved OutOfPath in 394 ms
17-02-28 20:07:01.670 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:01.670 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:01.671 -08 000000004 INF: ===================Move Tilt Motor 1===================
17-02-28 20:07:01.671 -08 000000020 INF: ===================Move Tilt Motor 3===================
17-02-28 20:07:01.671 -08 000000076 INF: ===================Move Tilt Motor 2===================
17-02-28 20:07:01.672 -08 000000020 INF: Tilt Motor 3: Moving to 5.4815 mm, started at 5.3393 mm, delta = 0.1422 mm
17-02-28 20:07:01.672 -08 000000020 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:01.672 -08 000000076 INF: Tilt Motor 2: Moving to 5.5351 mm, started at 5.3939 mm, delta = 0.1412 mm
17-02-28 20:07:01.672 -08 000000004 INF: Tilt Motor 1: Moving to 4.9501 mm, started at 5.0005 mm, delta = -0.0504 mm
17-02-28 20:07:01.673 -08 000000076 INF: FPGA: Xmit T2RD\n
17-02-28 20:07:01.680 -08 000000004 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:01.705 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:01.711 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:07:01.731 -08 000000023 INF: FPGA: Recv T3RD 21019
17-02-28 20:07:01.731 -08 000000023 INF: FPGA: Recv T2RD 21236
17-02-28 20:07:01.731 -08 000000023 INF: FPGA: Recv T1RD 19687
17-02-28 20:07:01.731 -08 000000004 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:07:01.731 -08 000000076 INF: Tilt Motor 2: Encoder: at motor step 3539 + 2/6
17-02-28 20:07:01.731 -08 000000076 INF: Tilt Motor 2: Moving to 21792 encoder counts
17-02-28 20:07:01.731 -08 000000076 INF: FPGA: Xmit T2MOVETO 21792\n
17-02-28 20:07:01.731 -08 000000020 INF: Tilt Motor 3: Encoder: at motor step 3503 + 1/6
17-02-28 20:07:01.731 -08 000000020 INF: Tilt Motor 3: Moving to 21581 encoder counts
17-02-28 20:07:01.732 -08 000000020 INF: FPGA: Xmit T3MOVETO 21581\n
17-02-28 20:07:01.732 -08 000000004 INF: Tilt Motor 1: Moving to 19489 encoder counts
17-02-28 20:07:01.733 -08 000000004 INF: FPGA: Xmit T1MOVETO 19489\n
17-02-28 20:07:01.793 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:01.799 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:07:01.855 -08 000000058 INF: FPGA: Recv T1MOVETO 32
17-02-28 20:07:01.855 -08 000000004 INF: Tilt Motor 1: To move from 5.000 to 4.950 (-0.050 mm) should take 33 steps, but required 32 steps (0.049 mm). Slippage = -0.002 mm (0.03%)
17-02-28 20:07:01.855 -08 000000004 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:01.917 -08 000000054 INF: FPGA: Recv T1RD 19495
17-02-28 20:07:01.917 -08 000000004 INF: Tilt Motor 1: Encoder: at motor step 3249 + 1/6
17-02-28 20:07:01.917 -08 000000004 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:01.974 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:01.983 -08 000000092 INF: FPGA: Recv T1RD 19495
17-02-28 20:07:01.983 -08 000000092 INF: FPGA: Recv T2MOVETO 92
17-02-28 20:07:01.983 -08 000000092 INF: FPGA: Recv T3MOVETO 93
17-02-28 20:07:01.983 -08 000000004 INF: Tilt Motor 1: Encoder: at motor step 3249 + 1/6
17-02-28 20:07:01.983 -08 000000020 INF: Tilt Motor 3: To move from 5.339 to 5.482 (0.142 mm) should take 94 steps, but required 93 steps (0.142 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:07:01.983 -08 000000004 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:01.983 -08 000000076 INF: Tilt Motor 2: To move from 5.394 to 5.535 (0.141 mm) should take 93 steps, but required 92 steps (0.140 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:07:01.984 -08 000000020 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:01.986 -08 000000076 INF: FPGA: Xmit T2RD\n
17-02-28 20:07:02.042 -08 000000090 INF: FPGA: Recv T1RD 19495
17-02-28 20:07:02.042 -08 000000090 INF: FPGA: Recv T3RD 21578
17-02-28 20:07:02.042 -08 000000090 INF: FPGA: Recv T2RD 21787
17-02-28 20:07:02.042 -08 000000004 INF: Tilt Motor 1: Encoder: at motor step 3249 + 1/6
17-02-28 20:07:02.042 -08 000000076 INF: Tilt Motor 2: Encoder: at motor step 3631 + 1/6
17-02-28 20:07:02.042 -08 000000020 INF: Tilt Motor 3: Encoder: at motor step 3596 + 2/6
17-02-28 20:07:02.042 -08 000000076 INF: FPGA: Xmit T2RD\n
17-02-28 20:07:02.042 -08 000000004 INF: Tilt Motor 1: After move to 4.9501, error = 0.0016, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:02.042 -08 000000004 INF: Tilt Motor 1: Moved to 4.9517 after 371.0509 ms
17-02-28 20:07:02.043 -08 000000004 INF: ======================================
17-02-28 20:07:02.043 -08 000000020 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:02.107 -08 000000009 INF: FPGA: Recv T2RD 21787
17-02-28 20:07:02.107 -08 000000009 INF: FPGA: Recv T3RD 21578
17-02-28 20:07:02.107 -08 000000020 INF: Tilt Motor 3: Encoder: at motor step 3596 + 2/6
17-02-28 20:07:02.107 -08 000000076 INF: Tilt Motor 2: Encoder: at motor step 3631 + 1/6
17-02-28 20:07:02.107 -08 000000020 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:02.108 -08 000000076 INF: FPGA: Xmit T2RD\n
17-02-28 20:07:02.169 -08 000000095 INF: FPGA: Recv T3RD 21578
17-02-28 20:07:02.169 -08 000000095 INF: FPGA: Recv T2RD 21787
17-02-28 20:07:02.169 -08 000000020 INF: Tilt Motor 3: Encoder: at motor step 3596 + 2/6
17-02-28 20:07:02.169 -08 000000076 INF: Tilt Motor 2: Encoder: at motor step 3631 + 1/6
17-02-28 20:07:02.169 -08 000000076 INF: Tilt Motor 2: After move to 5.5351, error = -0.0012, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:02.169 -08 000000076 INF: Tilt Motor 2: Moved to 5.5339 after 497.5987 ms
17-02-28 20:07:02.169 -08 000000020 INF: Tilt Motor 3: After move to 5.4815, error = -0.0007, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:02.169 -08 000000020 INF: Tilt Motor 3: Moved to 5.4808 after 497.918 ms
17-02-28 20:07:02.170 -08 000000076 INF: ======================================
17-02-28 20:07:02.170 -08 000000020 INF: ======================================
17-02-28 20:07:02.171 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:02.172 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:02.172 -08 000000042 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=4.95011748575228, m2=5.53513410548349, m3=5.48154010548349
17-02-28 20:07:02.178 -08 000000042 INF: Transformed XStagePosition from 88.54063 mm to 88.5406341552734 mm.
17-02-28 20:07:02.187 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:07:02.187 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:07:02.187 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:07:02.187 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:07:02.187 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:07:02.191 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:07:02.191 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:07:02.191 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:07:02.231 -08 000000053 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:02.231 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:07:02.232 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:07:02.232 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1581 mm
17-02-28 20:07:02.232 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:07:02.260 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:07:02.293 -08 000000068 INF: FPGA: Recv ZTRG 
17-02-28 20:07:02.293 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:07:02.355 -08 000000056 INF: FPGA: Recv ZYT 
17-02-28 20:07:02.355 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:07:02.355 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:07:02.417 -08 000000004 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:07:02.417 -08 000000004 INF: FPGA: Recv ZMV 
17-02-28 20:07:02.417 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:07:02.417 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.0648 ms
17-02-28 20:07:02.417 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:07:02.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:02.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 12 of 30 seconds left===================
17-02-28 20:07:02.479 -08 000000057 INF: FPGA: Recv ZDACR 60292
17-02-28 20:07:02.479 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.3973 ms w/comms
17-02-28 20:07:02.479 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:02.479 -08 000000042 INF: Z Motor: MoveAbsStepped took 247.5877 ms
17-02-28 20:07:02.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:07:02.480 -08 000000042 INF: Transformed XStagePosition from 88.54063 mm to 88.5406341552734 mm.
17-02-28 20:07:02.488 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:07:02.489 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:07:02.489 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:07:02.489 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:07:02.489 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:07:02.541 -08 000000094 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:02.552 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:07:02.552 -08 000000042 INF: Transformed XStagePosition from 88.54063 mm to 88.5406341552734 mm.
17-02-28 20:07:02.561 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:07:02.561 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:07:02.561 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:07:02.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:02.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:07:02.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:02.564 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = H_1
17-02-28 20:07:02.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:02.565 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:02.565 -08 000000085 INF: ===================MoveEmissionFilters===================
17-02-28 20:07:02.566 -08 000000033 INF: ===================Move X,Y===================
17-02-28 20:07:02.566 -08 000000059 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:07:02.566 -08 000000035 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:07:02.567 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:07:02.567 -08 000000040 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:07:02.567 -08 000000033 INF: ===================Move X,Y, Parallel===================
17-02-28 20:07:02.567 -08 000000059 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:07:02.567 -08 000000035 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:07:02.568 -08 000000040 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:07:02.568 -08 000000100 INF: ===================Move X Motor without settling===================
17-02-28 20:07:02.568 -08 000000081 INF: ===================Move Y Motor without settling===================
17-02-28 20:07:02.568 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:07:02.568 -08 000000100 INF: X Motor: Xmit PR VM\n
17-02-28 20:07:02.568 -08 000000081 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9030 mm
17-02-28 20:07:02.568 -08 000000081 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:07:02.568 -08 000000081 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:02.568 -08 000000058 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:07:02.568 -08 000000074 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:07:02.568 -08 000000089 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:07:02.568 -08 000000073 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:07:02.568 -08 000000054 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:07:02.568 -08 000000074 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:07:02.569 -08 000000010 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:07:02.569 -08 000000103 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:07:02.569 -08 000000054 INF: ======================================
17-02-28 20:07:02.569 -08 000000073 INF: ======================================
17-02-28 20:07:02.569 -08 000000077 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:07:02.569 -08 000000103 INF: ======================================
17-02-28 20:07:02.570 -08 000000077 INF: ======================================
17-02-28 20:07:02.570 -08 000000074 INF: ======================================
17-02-28 20:07:02.570 -08 000000010 INF: ======================================
17-02-28 20:07:02.570 -08 000000040 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:07:02.571 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:07:02.571 -08 000000058 INF: ======================================
17-02-28 20:07:02.572 -08 000000089 INF: ======================================
17-02-28 20:07:02.572 -08 000000040 INF: ======================================
17-02-28 20:07:02.572 -08 000000025 INF: ======================================
17-02-28 20:07:02.573 -08 000000059 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:07:02.573 -08 000000035 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:07:02.574 -08 000000059 INF: ======================================
17-02-28 20:07:02.574 -08 000000035 INF: ======================================
17-02-28 20:07:02.575 -08 000000085 INF: ======================================
17-02-28 20:07:02.609 -08 000000100 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:07:02.609 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:07:02.609 -08 000000081 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:07:02.609 -08 000000081 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:02.609 -08 000000100 INF: X Motor: Xmit PR VI\n
17-02-28 20:07:02.668 -08 000000100 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:07:02.668 -08 000000100 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:07:02.668 -08 000000100 INF: X Motor: Moving to 88.5406 mm @15.000 mm/sec, started at 86.3071 mm
17-02-28 20:07:02.668 -08 000000100 INF: X Motor: Xmit MA 12100\n
17-02-28 20:07:02.669 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:07:02.669 -08 000000081 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:02.733 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:07:02.733 -08 000000081 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:02.733 -08 000000081 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:07:02.733 -08 000000081 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:07:02.735 -08 000000100 INF: X Motor: Recv MA 12100\r\n>
17-02-28 20:07:02.735 -08 000000100 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:07:02.795 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:07:02.795 -08 000000081 INF: Y Motor: Start the move command
17-02-28 20:07:02.795 -08 000000081 INF: Y Motor: Xmit t 1\r
17-02-28 20:07:02.857 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:07:02.857 -08 000000081 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:07:02.857 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:02.983 -08 000000081 INF: Y Motor: Unshifted Position: 1071855
17-02-28 20:07:03.033 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:03.155 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:03.295 -08 000000081 INF: Y Motor: Unshifted Position: 1781961
17-02-28 20:07:03.345 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:03.357 -08 000000100 INF: X Motor: Xmit PR ER\n
17-02-28 20:07:03.421 -08 000000100 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:07:03.421 -08 000000100 INF: X Motor: Moved to 88.5410 after 686 ms
17-02-28 20:07:03.421 -08 000000100 INF: ======================================
17-02-28 20:07:03.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:03.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 11 of 30 seconds left===================
17-02-28 20:07:03.469 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:03.604 -08 000000081 INF: Y Motor: Unshifted Position: 2562828
17-02-28 20:07:03.654 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:03.781 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:03.919 -08 000000081 INF: Y Motor: Unshifted Position: 3338606
17-02-28 20:07:03.969 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:04.091 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:04.228 -08 000000081 INF: Y Motor: Unshifted Position: 4123662
17-02-28 20:07:04.278 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:04.404 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:04.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:04.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 10 of 30 seconds left===================
17-02-28 20:07:04.540 -08 000000081 INF: Y Motor: Unshifted Position: 4896939
17-02-28 20:07:04.590 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:04.717 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:04.853 -08 000000081 INF: Y Motor: Unshifted Position: 5678072
17-02-28 20:07:04.903 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:05.027 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:05.166 -08 000000081 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:07:05.166 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:07:05.166 -08 000000081 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:05.228 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:07:05.228 -08 000000081 INF: Y Motor: Moved to 64.5335 after 2371 ms
17-02-28 20:07:05.228 -08 000000081 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:07:05.290 -08 000000081 INF: Y Motor: Recv v 4096\r
17-02-28 20:07:05.290 -08 000000081 INF: Y Motor: Status After move finished OK:
17-02-28 20:07:05.290 -08 000000081 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:05.352 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:07:05.352 -08 000000081 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:05.352 -08 000000081 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:07:05.416 -08 000000081 INF: Y Motor: Recv v 402653184\r
17-02-28 20:07:05.416 -08 000000081 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:07:05.416 -08 000000081 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:07:05.416 -08 000000081 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:07:05.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:05.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 9 of 30 seconds left===================
17-02-28 20:07:05.476 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:07:05.476 -08 000000081 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:07:05.476 -08 000000081 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:07:05.476 -08 000000081 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:05.540 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:07:05.540 -08 000000081 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:07:05.540 -08 000000081 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:05.603 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:07:05.603 -08 000000081 INF: ======================================
17-02-28 20:07:05.604 -08 000000033 INF: ===================Move X,Y===================
17-02-28 20:07:05.605 -08 000000033 INF: ======================================
17-02-28 20:07:05.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:05.608 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:05.608 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:07:05.608 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:07:05.667 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:07:05.667 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:07:05.725 -08 000000097 INF: FPGA: Recv ZFREQCL
17-02-28 20:07:05.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:07:05.726 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:05.726 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:07:05.787 -08 000000099 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:07:05.787 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:07:05.787 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:05.788 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:05.789 -08 000000004 INF: ===================TDI Scan Setup===================
17-02-28 20:07:05.789 -08 000000076 INF: ===================Set YMotor gains for scans===================
17-02-28 20:07:05.789 -08 000000076 INF: ======================================
17-02-28 20:07:05.789 -08 000000004 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:07:05.790 -08 000000004 INF: ===================TDI Scan Setup===================
17-02-28 20:07:05.791 -08 000000004 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:07:05.792 -08 000000004 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:07:05.792 -08 000000004 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:07:05.850 -08 000000035 INF: FPGA: Recv TDIYPOS
17-02-28 20:07:05.850 -08 000000004 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:07:05.852 -08 000000004 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:07:05.852 -08 000000004 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:07:05.913 -08 000000054 INF: FPGA: Recv TDIYARM2
17-02-28 20:07:05.914 -08 000000004 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:07:05.915 -08 000000004 INF: ===================TDI Scan Setup===================
17-02-28 20:07:05.917 -08 000000004 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:07:05.917 -08 000000004 INF: ===================TDI Scan Setup===================
17-02-28 20:07:05.918 -08 000000004 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:07:05.919 -08 000000004 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:07:05.920 -08 000000004 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:07:06.287 -08 000000004 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:07:06.287 -08 000000004 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:07:06.287 -08 000000004 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:07:06.302 -08 000000004 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:07:06.304 -08 000000004 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:07:06.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:06.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 8 of 30 seconds left===================
17-02-28 20:07:06.683 -08 000000004 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:07:06.683 -08 000000004 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:07:06.683 -08 000000004 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:07:06.698 -08 000000004 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:07:06.700 -08 000000004 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:07:06.701 -08 000000004 INF: ===================TDI Scan Setup===================
17-02-28 20:07:06.702 -08 000000004 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:06.703 -08 000000004 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:07:06.703 -08 000000004 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:06.705 -08 000000004 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:07:06.705 -08 000000004 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:07:06.705 -08 000000004 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:07:06.705 -08 000000004 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:07:06.725 -08 000000074 INF: FPGA: Recv ZYT 
17-02-28 20:07:06.725 -08 000000004 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:07:06.726 -08 000000004 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:07:06.785 -08 000000091 INF: FPGA: Recv ZARM
17-02-28 20:07:06.785 -08 000000004 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.2865 ms
17-02-28 20:07:06.785 -08 000000004 INF: Z Motor: ArmAbsStepped took 80.0292 ms
17-02-28 20:07:06.785 -08 000000004 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:06.786 -08 000000004 INF: ===================TDI Scan Setup===================
17-02-28 20:07:06.787 -08 000000004 INF: ======================================
17-02-28 20:07:06.789 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:06.789 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:06.790 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:06.790 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:06.791 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:06.792 -08 000000076 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:07:06.792 -08 000000076 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:07:06.792 -08 000000076 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:07:06.792 -08 000000076 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:07:06.792 -08 000000076 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:07:06.792 -08 000000066 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:07:06.792 -08 000000066 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:07:06.792 -08 000000066 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:07:06.792 -08 000000066 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:07:06.796 -08 000000066 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:07:07.160 -08 000000070 INF: FPGA: Recv EX2MV
17-02-28 20:07:07.160 -08 000000076 INF: Excitation Filter 2: Moved -107 steps in 368.0639 ms
17-02-28 20:07:07.160 -08 000000076 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.1658 ms
17-02-28 20:07:07.160 -08 000000076 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.2327 ms
17-02-28 20:07:07.160 -08 000000076 INF: ======================================
17-02-28 20:07:07.222 -08 000000040 INF: FPGA: Recv EX1MV
17-02-28 20:07:07.222 -08 000000066 INF: Excitation Filter 1: Moved -107 steps in 429.5972 ms
17-02-28 20:07:07.222 -08 000000066 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 429.6915 ms
17-02-28 20:07:07.222 -08 000000066 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 429.7595 ms
17-02-28 20:07:07.222 -08 000000066 INF: ======================================
17-02-28 20:07:07.224 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:07.225 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:07.226 -08 000000045 INF: ===================Serial===================
17-02-28 20:07:07.226 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:07:07.226 -08 000000035 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:07.226 -08 000000101 INF: ===================Move Y Motor without settling===================
17-02-28 20:07:07.226 -08 000000101 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:07:07.226 -08 000000101 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:07:07.226 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:07.227 -08 000000045 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:07:07.227 -08 000000045 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:07:07.227 -08 000000057 INF: ===================Camera TDI, Parallel===================
17-02-28 20:07:07.228 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:07:07.228 -08 000000055 INF: ===================Camera TDI===================
17-02-28 20:07:07.228 -08 000000035 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:07:07.228 -08 000000035 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:07:07.228 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:07.229 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:07.229 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:07.229 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:07.290 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:07:07.290 -08 000000101 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:07:07.290 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:07.349 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:07:07.349 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:07.379 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:07.379 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:07.379 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:07.379 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:07.411 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:07:07.411 -08 000000101 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:07.411 -08 000000101 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:07:07.411 -08 000000101 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:07:07.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:07.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 7 of 30 seconds left===================
17-02-28 20:07:07.476 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:07:07.476 -08 000000101 INF: Y Motor: Start the move command
17-02-28 20:07:07.476 -08 000000101 INF: Y Motor: Xmit t 1\r
17-02-28 20:07:07.529 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:07.529 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:07.529 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:07.529 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:07.536 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:07:07.536 -08 000000101 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:07:07.536 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:07.663 -08 000000101 INF: Y Motor: Unshifted Position: 5935030
17-02-28 20:07:07.679 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:07.679 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:07.679 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:07.679 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:07.713 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:07.829 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:07:07.829 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:07:07.829 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:07:07.829 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:07:07.829 -08 000000091 INF: ===================Camera #0 Frame #1===================
17-02-28 20:07:07.829 -08 000000055 INF: ===================Camera #2 Frame #1===================
17-02-28 20:07:07.838 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:07.974 -08 000000101 INF: Y Motor: Unshifted Position: 5888477
17-02-28 20:07:07.982 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:07:07.982 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2
17-02-28 20:07:07.982 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:07:07.982 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2
17-02-28 20:07:07.982 -08 000000055 INF: ===================Camera #2 Frame #2===================
17-02-28 20:07:07.982 -08 000000091 INF: ===================Camera #0 Frame #2===================
17-02-28 20:07:08.024 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:08.135 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:07:08.135 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:07:08.135 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:07:08.135 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:07:08.135 -08 000000055 INF: ===================Camera #2 Frame #4===================
17-02-28 20:07:08.135 -08 000000091 INF: ===================Camera #0 Frame #4===================
17-02-28 20:07:08.148 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:08.287 -08 000000101 INF: Y Motor: Unshifted Position: 5841972
17-02-28 20:07:08.291 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:07:08.291 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:07:08.291 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:07:08.291 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:07:08.291 -08 000000055 INF: ===================Camera #2 Frame #5===================
17-02-28 20:07:08.291 -08 000000091 INF: ===================Camera #0 Frame #5===================
17-02-28 20:07:08.337 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:08.347 -08 000000077 INF: FPGA: Recv ZWAIT 
17-02-28 20:07:08.347 -08 000000045 INF: ===================Serial===================
17-02-28 20:07:08.349 -08 000000045 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:07:08.349 -08 000000045 INF: ===================Serial===================
17-02-28 20:07:08.350 -08 000000045 INF: ======================================
17-02-28 20:07:08.409 -08 000000094 INF: FPGA: Recv TDIYWAIT
17-02-28 20:07:08.409 -08 000000035 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:08.411 -08 000000035 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:07:08.411 -08 000000032 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:07:08.412 -08 000000053 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:07:08.412 -08 000000032 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:07:08.412 -08 000000032 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:07:08.412 -08 000000032 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:07:08.412 -08 000000032 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:07:08.412 -08 000000053 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:07:08.412 -08 000000053 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:07:08.412 -08 000000053 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:07:08.413 -08 000000053 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:07:08.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:08.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 6 of 30 seconds left===================
17-02-28 20:07:08.444 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:07:08.444 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:07:08.444 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:07:08.444 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:07:08.444 -08 000000055 INF: ===================Camera #2 Frame #6===================
17-02-28 20:07:08.444 -08 000000091 INF: ===================Camera #0 Frame #6===================
17-02-28 20:07:08.447 -08 000000091 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:07:08.447 -08 000000055 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:07:08.448 -08 000000055 INF: ===================CameraTDI Cleanup===================
17-02-28 20:07:08.449 -08 000000091 INF: ===================CameraTDI Cleanup===================
17-02-28 20:07:08.461 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:08.472 -08 000000055 INF: Camera #2 ReleaseBuffer
17-02-28 20:07:08.472 -08 000000055 INF: ===================Camera TDI===================
17-02-28 20:07:08.473 -08 000000055 INF: ======================================
17-02-28 20:07:08.496 -08 000000091 INF: Camera #0 ReleaseBuffer
17-02-28 20:07:08.496 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:07:08.497 -08 000000091 INF: ======================================
17-02-28 20:07:08.498 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:07:08.500 -08 000000057 INF: ======================================
17-02-28 20:07:08.597 -08 000000101 INF: Y Motor: Unshifted Position: 5797060
17-02-28 20:07:08.647 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:08.784 -08 000000074 INF: FPGA: Recv EX1MV
17-02-28 20:07:08.784 -08 000000032 INF: Excitation Filter 1: Moved 107 steps in 372.08 ms
17-02-28 20:07:08.784 -08 000000032 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.1841 ms
17-02-28 20:07:08.784 -08 000000032 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.2549 ms
17-02-28 20:07:08.784 -08 000000032 INF: ======================================
17-02-28 20:07:08.786 -08 000000101 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:07:08.786 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:07:08.786 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:08.846 -08 000000089 INF: FPGA: Recv EX2MV
17-02-28 20:07:08.846 -08 000000053 INF: Excitation Filter 2: Moved 107 steps in 433.8863 ms
17-02-28 20:07:08.846 -08 000000053 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 433.9859 ms
17-02-28 20:07:08.846 -08 000000053 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 434.1098 ms
17-02-28 20:07:08.846 -08 000000053 INF: ======================================
17-02-28 20:07:08.847 -08 000000035 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:08.848 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:07:08.848 -08 000000101 INF: Y Motor: Moved to 62.9704 after 1312 ms
17-02-28 20:07:08.848 -08 000000101 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:07:08.849 -08 000000035 INF: ======================================
17-02-28 20:07:08.910 -08 000000101 INF: Y Motor: Recv v 4097\r
17-02-28 20:07:08.910 -08 000000101 INF: Y Motor: Status After move finished OK:
17-02-28 20:07:08.910 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:08.972 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:07:08.972 -08 000000101 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:08.972 -08 000000101 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:07:09.034 -08 000000101 INF: Y Motor: Recv v 134217728\r
17-02-28 20:07:09.034 -08 000000101 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:07:09.034 -08 000000101 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:07:09.034 -08 000000101 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:07:09.096 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:07:09.096 -08 000000101 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:07:09.096 -08 000000101 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:07:09.096 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:09.158 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:07:09.158 -08 000000101 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:07:09.158 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:09.223 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:07:09.223 -08 000000101 INF: ======================================
17-02-28 20:07:09.224 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:09.225 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:09.226 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:09.226 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:07:09.283 -08 000000065 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:07:09.283 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:07:09.345 -08 000000056 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:07:09.345 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:07:09.407 -08 000000098 INF: FPGA: Recv ZADCR 2426
17-02-28 20:07:09.407 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:07:09.407 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:07:09.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:09.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 5 of 30 seconds left===================
17-02-28 20:07:09.469 -08 000000099 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:07:09.469 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:07:09.469 -08 000000042 INF: TDIScan finished after 6916.0555 ms
17-02-28 20:07:09.469 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:07:09.469 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:07:09.469 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:07:09.531 -08 000000092 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:07:09.531 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:09.532 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:09.533 -08 000000095 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:07:09.533 -08 000000047 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:07:09.533 -08 000000098 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:07:09.533 -08 000000095 INF: ======================================
17-02-28 20:07:09.533 -08 000000098 INF: ======================================
17-02-28 20:07:09.533 -08 000000047 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:07:09.533 -08 000000047 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:07:09.595 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:07:09.595 -08 000000047 INF: ======================================
17-02-28 20:07:09.596 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:09.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:09.598 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:07:09.636 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:09.636 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:07:09.664 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:09.664 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:07:09.695 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:09.695 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:07:09.724 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:09.724 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:07:09.724 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:07:09.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:07:09.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:07:09.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:07:09.734 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:07:10.419 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:07:10.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:10.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 4 of 30 seconds left===================
17-02-28 20:07:10.442 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0897690689244341Best Z position at top surface = -0.162819082866486Best Z position at top surface + compensator offset = -0.140119082866486 C:2,L:8,T
17-02-28 20:07:10.444 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.162819082866486
17-02-28 20:07:10.444 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.99039
17-02-28 20:07:10.444 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0897690689244341
17-02-28 20:07:10.444 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.63884
17-02-28 20:07:10.444 -08 000000042 INF: Z-height at LaneTopSurface is -0.162819082866486.
17-02-28 20:07:10.444 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:07:10.579 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:07:10.579 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:07:10.654 -08 000000065 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:10.654 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:07:10.656 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:10.656 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:10.657 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:10.657 -08 000000023 INF: ===================Move Tilt Motor 1===================
17-02-28 20:07:10.657 -08 000000078 INF: ===================Move Tilt Motor 2===================
17-02-28 20:07:10.657 -08 000000099 INF: ===================Move Tilt Motor 3===================
17-02-28 20:07:10.658 -08 000000023 INF: Tilt Motor 1: Moving to 4.9414 mm, started at 4.9517 mm, delta = -0.0103 mm
17-02-28 20:07:10.658 -08 000000023 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:10.658 -08 000000078 INF: Tilt Motor 2: Moving to 5.5602 mm, started at 5.5339 mm, delta = 0.0263 mm
17-02-28 20:07:10.658 -08 000000099 INF: Tilt Motor 3: Moving to 5.5066 mm, started at 5.4808 mm, delta = 0.0258 mm
17-02-28 20:07:10.659 -08 000000078 INF: FPGA: Xmit T2RD\n
17-02-28 20:07:10.661 -08 000000099 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:10.716 -08 000000094 INF: FPGA: Recv T1RD 19495
17-02-28 20:07:10.716 -08 000000094 INF: FPGA: Recv T2RD 21787
17-02-28 20:07:10.716 -08 000000094 INF: FPGA: Recv T3RD 21577
17-02-28 20:07:10.716 -08 000000099 INF: Tilt Motor 3: Encoder: at motor step 3596 + 1/6
17-02-28 20:07:10.716 -08 000000078 INF: Tilt Motor 2: Encoder: at motor step 3631 + 1/6
17-02-28 20:07:10.716 -08 000000099 INF: Tilt Motor 3: Moving to 21680 encoder counts
17-02-28 20:07:10.716 -08 000000023 INF: Tilt Motor 1: Encoder: at motor step 3249 + 1/6
17-02-28 20:07:10.716 -08 000000023 INF: Tilt Motor 1: Moving to 19454 encoder counts
17-02-28 20:07:10.716 -08 000000078 INF: Tilt Motor 2: Moving to 21891 encoder counts
17-02-28 20:07:10.716 -08 000000099 INF: FPGA: Xmit T3MOVETO 21680\n
17-02-28 20:07:10.719 -08 000000023 INF: FPGA: Xmit T1MOVETO 19454\n
17-02-28 20:07:10.720 -08 000000078 INF: FPGA: Xmit T2MOVETO 21891\n
17-02-28 20:07:10.843 -08 000000091 INF: FPGA: Recv T1MOVETO 6
17-02-28 20:07:10.843 -08 000000091 INF: FPGA: Recv T3MOVETO 16
17-02-28 20:07:10.843 -08 000000091 INF: FPGA: Recv T2MOVETO 17
17-02-28 20:07:10.843 -08 000000078 INF: Tilt Motor 2: To move from 5.534 to 5.560 (0.026 mm) should take 17 steps, but required 17 steps (0.026 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:07:10.843 -08 000000023 INF: Tilt Motor 1: To move from 4.952 to 4.941 (-0.010 mm) should take 7 steps, but required 6 steps (0.009 mm). Slippage = -0.002 mm (0.15%)
17-02-28 20:07:10.843 -08 000000078 INF: FPGA: Xmit T2RD\n
17-02-28 20:07:10.843 -08 000000099 INF: Tilt Motor 3: To move from 5.481 to 5.507 (0.026 mm) should take 17 steps, but required 16 steps (0.024 mm). Slippage = -0.002 mm (-0.06%)
17-02-28 20:07:10.844 -08 000000023 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:10.846 -08 000000099 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:10.905 -08 000000065 INF: FPGA: Recv T2RD 21889
17-02-28 20:07:10.905 -08 000000065 INF: FPGA: Recv T1RD 19459
17-02-28 20:07:10.905 -08 000000065 INF: FPGA: Recv T3RD 21674
17-02-28 20:07:10.905 -08 000000099 INF: Tilt Motor 3: Encoder: at motor step 3612 + 2/6
17-02-28 20:07:10.905 -08 000000078 INF: Tilt Motor 2: Encoder: at motor step 3648 + 1/6
17-02-28 20:07:10.905 -08 000000023 INF: Tilt Motor 1: Encoder: at motor step 3243 + 1/6
17-02-28 20:07:10.905 -08 000000099 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:10.906 -08 000000078 INF: FPGA: Xmit T2RD\n
17-02-28 20:07:10.908 -08 000000023 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:10.967 -08 000000073 INF: FPGA: Recv T3RD 21674
17-02-28 20:07:10.967 -08 000000073 INF: FPGA: Recv T2RD 21889
17-02-28 20:07:10.967 -08 000000073 INF: FPGA: Recv T1RD 19459
17-02-28 20:07:10.967 -08 000000023 INF: Tilt Motor 1: Encoder: at motor step 3243 + 1/6
17-02-28 20:07:10.967 -08 000000078 INF: Tilt Motor 2: Encoder: at motor step 3648 + 1/6
17-02-28 20:07:10.967 -08 000000023 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:10.967 -08 000000099 INF: Tilt Motor 3: Encoder: at motor step 3612 + 2/6
17-02-28 20:07:10.968 -08 000000099 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:10.970 -08 000000078 INF: FPGA: Xmit T2RD\n
17-02-28 20:07:11.029 -08 000000077 INF: FPGA: Recv T1RD 19459
17-02-28 20:07:11.029 -08 000000077 INF: FPGA: Recv T3RD 21674
17-02-28 20:07:11.029 -08 000000077 INF: FPGA: Recv T2RD 21889
17-02-28 20:07:11.029 -08 000000078 INF: Tilt Motor 2: Encoder: at motor step 3648 + 1/6
17-02-28 20:07:11.029 -08 000000023 INF: Tilt Motor 1: Encoder: at motor step 3243 + 1/6
17-02-28 20:07:11.029 -08 000000099 INF: Tilt Motor 3: Encoder: at motor step 3612 + 2/6
17-02-28 20:07:11.029 -08 000000099 INF: Tilt Motor 3: After move to 5.5066, error = -0.0014, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:11.029 -08 000000078 INF: Tilt Motor 2: After move to 5.5602, error = -0.0004, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:11.029 -08 000000023 INF: Tilt Motor 1: After move to 4.9414, error = 0.0011, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:11.029 -08 000000099 INF: Tilt Motor 3: Moved to 5.5052 after 371.2675 ms
17-02-28 20:07:11.029 -08 000000023 INF: Tilt Motor 1: Moved to 4.9426 after 371.5664 ms
17-02-28 20:07:11.029 -08 000000078 INF: Tilt Motor 2: Moved to 5.5598 after 371.555 ms
17-02-28 20:07:11.029 -08 000000099 INF: ======================================
17-02-28 20:07:11.029 -08 000000078 INF: ======================================
17-02-28 20:07:11.030 -08 000000023 INF: ======================================
17-02-28 20:07:11.031 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:11.031 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:11.032 -08 000000042 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=4.9414379905051, m2=5.56021691927735, m3=5.50662291927735
17-02-28 20:07:11.032 -08 000000042 INF: ETF Best Z: -0.1401191 mm (36731 DAC)
17-02-28 20:07:11.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:11.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:11.033 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:07:11.033 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:07:11.468 -08 000000085 INF: FPGA: Recv MIOCOMPF
17-02-28 20:07:11.469 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:11.469 -08 000000042 INF: Compensator: Moved IntoPath in 435 ms
17-02-28 20:07:11.469 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 3 of 30 seconds left===================
17-02-28 20:07:11.469 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:11.470 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:11.476 -08 000000042 INF: Swath 1 position calculated to be: {X=87.98663, Y=39.76308} from estimated center X= 88.50199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:07:11.476 -08 000000042 INF: Swath 2 position calculated to be: {X=89.09464, Y=39.76308} from estimated center X= 88.50199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:07:11.482 -08 000000042 INF: Swath 0: Converted transform from (31.53782, -18.33523) pixels to (0.01104, -0.00621) mm.
17-02-28 20:07:11.487 -08 000000042 INF: Swath 1: Converted transform from (6.856063, -12.89513) pixels to (0.002415, -0.004485) mm.
17-02-28 20:07:11.488 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308===================
17-02-28 20:07:11.488 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308===================
17-02-28 20:07:11.488 -08 000000042 INF: Transformed XStagePosition from 87.98663 mm to 87.9976733010262 mm.
17-02-28 20:07:11.500 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5468793556802 mm.
17-02-28 20:07:11.500 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3468793556802 mm.
17-02-28 20:07:11.500 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4376293556802 mm.
17-02-28 20:07:11.502 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:11.502 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:07:11.502 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:11.502 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = H_1
17-02-28 20:07:11.511 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:11.511 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:11.512 -08 000000059 INF: ===================MoveEmissionFilters===================
17-02-28 20:07:11.512 -08 000000025 INF: ===================Move X,Y===================
17-02-28 20:07:11.512 -08 000000103 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:07:11.513 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:07:11.513 -08 000000025 INF: ===================Move X,Y, Parallel===================
17-02-28 20:07:11.513 -08 000000081 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:07:11.513 -08 000000103 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:07:11.513 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:07:11.513 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:07:11.513 -08 000000103 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:07:11.513 -08 000000103 INF: Z Motor: Moving to -0.1601 mm, started at -0.0100 mm
17-02-28 20:07:11.513 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:07:11.513 -08 000000103 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:07:11.514 -08 000000051 INF: ===================Move X Motor without settling===================
17-02-28 20:07:11.514 -08 000000081 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:07:11.514 -08 000000056 INF: ===================Move Y Motor without settling===================
17-02-28 20:07:11.514 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:07:11.514 -08 000000051 INF: X Motor: Xmit PR VM\n
17-02-28 20:07:11.514 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:07:11.514 -08 000000032 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:07:11.514 -08 000000053 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:07:11.515 -08 000000092 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:07:11.515 -08 000000057 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:07:11.515 -08 000000102 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:07:11.515 -08 000000070 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:07:11.515 -08 000000056 INF: Y Motor: Moving to 64.5469 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:07:11.515 -08 000000032 INF: ======================================
17-02-28 20:07:11.515 -08 000000077 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:07:11.515 -08 000000064 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:07:11.515 -08 000000070 INF: ======================================
17-02-28 20:07:11.515 -08 000000077 INF: ======================================
17-02-28 20:07:11.515 -08 000000053 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:07:11.516 -08 000000064 INF: ======================================
17-02-28 20:07:11.516 -08 000000056 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:07:11.516 -08 000000056 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:11.516 -08 000000102 INF: ======================================
17-02-28 20:07:11.516 -08 000000092 INF: ======================================
17-02-28 20:07:11.517 -08 000000053 INF: ======================================
17-02-28 20:07:11.517 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:07:11.517 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:07:11.518 -08 000000057 INF: ======================================
17-02-28 20:07:11.518 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:07:11.518 -08 000000036 INF: ======================================
17-02-28 20:07:11.518 -08 000000076 INF: ======================================
17-02-28 20:07:11.519 -08 000000081 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:07:11.519 -08 000000010 INF: ======================================
17-02-28 20:07:11.520 -08 000000081 INF: ======================================
17-02-28 20:07:11.521 -08 000000059 INF: ======================================
17-02-28 20:07:11.530 -08 000000072 INF: FPGA: Recv ZTRG 
17-02-28 20:07:11.530 -08 000000103 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:07:11.592 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:07:11.593 -08 000000103 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:07:11.593 -08 000000103 INF: FPGA: Xmit ZMV 41974\n
17-02-28 20:07:11.594 -08 000000056 INF: Y Motor: Recv ok\r
17-02-28 20:07:11.594 -08 000000056 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:07:11.594 -08 000000056 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:11.594 -08 000000051 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:07:11.594 -08 000000051 INF: X Motor: Xmit PR VI\n
17-02-28 20:07:11.652 -08 000000004 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:07:11.652 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:07:11.654 -08 000000051 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:07:11.654 -08 000000056 INF: Y Motor: Recv ok\r
17-02-28 20:07:11.654 -08 000000051 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:07:11.654 -08 000000056 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:11.654 -08 000000051 INF: X Motor: Moving to 87.9977 mm @15.000 mm/sec, started at 88.5410 mm
17-02-28 20:07:11.654 -08 000000051 INF: X Motor: Xmit MA 11877\n
17-02-28 20:07:11.719 -08 000000051 INF: X Motor: Recv MA 11877\r\n>
17-02-28 20:07:11.719 -08 000000056 INF: Y Motor: Recv v 0\r
17-02-28 20:07:11.719 -08 000000056 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:11.719 -08 000000051 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:07:11.719 -08 000000056 INF: Y Motor: Set target position to 5954688 encoder counts
17-02-28 20:07:11.719 -08 000000056 INF: Y Motor: Xmit s r0xca 5954688\r
17-02-28 20:07:11.779 -08 000000064 INF: FPGA: Recv ZMV 
17-02-28 20:07:11.779 -08 000000103 INF: Z Motor: MoveAndTrigger 'ZMV' command took 186.2757 ms
17-02-28 20:07:11.779 -08 000000103 INF: FPGA: Xmit ZDACR\n
17-02-28 20:07:11.781 -08 000000056 INF: Y Motor: Recv ok\r
17-02-28 20:07:11.781 -08 000000056 INF: Y Motor: Start the move command
17-02-28 20:07:11.781 -08 000000056 INF: Y Motor: Xmit t 1\r
17-02-28 20:07:11.841 -08 000000098 INF: FPGA: Recv ZDACR 41974
17-02-28 20:07:11.841 -08 000000103 INF: Z Motor: MoveAndTrigger took 327.7891 ms w/comms
17-02-28 20:07:11.841 -08 000000103 INF: Z Motor: After move to -0.1601, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:11.841 -08 000000103 INF: Z Motor: MoveAbsStepped took 327.9385 ms
17-02-28 20:07:11.842 -08 000000103 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:07:11.843 -08 000000056 INF: Y Motor: Recv ok\r
17-02-28 20:07:11.843 -08 000000056 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:07:11.843 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:11.843 -08 000000103 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:07:11.844 -08 000000035 INF: ===================TDI Scan Setup===================
17-02-28 20:07:11.844 -08 000000085 INF: ===================Camera Arm TDI===================
17-02-28 20:07:11.845 -08 000000035 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:11.845 -08 000000085 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:07:11.845 -08 000000035 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:07:11.846 -08 000000085 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:07:11.846 -08 000000035 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:07:11.846 -08 000000035 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:07:11.903 -08 000000095 INF: FPGA: Recv ZSEL 
17-02-28 20:07:11.904 -08 000000035 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:07:11.904 -08 000000035 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:07:11.966 -08 000000092 INF: FPGA: Recv TDIBB
17-02-28 20:07:11.966 -08 000000035 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:07:11.967 -08 000000056 INF: Y Motor: Unshifted Position: 5880585
17-02-28 20:07:11.967 -08 000000035 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:07:11.968 -08 000000035 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:11.969 -08 000000035 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:07:11.969 -08 000000035 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:07:11.969 -08 000000035 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:07:12.017 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:12.027 -08 000000066 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:12.027 -08 000000035 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:12.029 -08 000000035 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:07:12.029 -08 000000035 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:12.031 -08 000000035 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:07:12.031 -08 000000035 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:07:12.031 -08 000000035 INF: Z Motor: Arming to move to -0.1201 mm
17-02-28 20:07:12.031 -08 000000035 INF: FPGA: Xmit ZYT 6434688 4\n
17-02-28 20:07:12.089 -08 000000055 INF: FPGA: Recv ZYT 
17-02-28 20:07:12.089 -08 000000035 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6380585 enc / 63.806 mm / ) = 6434688 enc / 64.347 mm
17-02-28 20:07:12.089 -08 000000035 INF: FPGA: Xmit ZARM 31488\n
17-02-28 20:07:12.141 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:12.151 -08 000000090 INF: FPGA: Recv ZARM
17-02-28 20:07:12.151 -08 000000035 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9454 ms
17-02-28 20:07:12.151 -08 000000035 INF: Z Motor: ArmAbsStepped took 119.9329 ms
17-02-28 20:07:12.151 -08 000000035 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:12.152 -08 000000035 INF: ===================TDI Scan Setup===================
17-02-28 20:07:12.153 -08 000000051 INF: X Motor: Xmit PR ER\n
17-02-28 20:07:12.154 -08 000000035 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:07:12.154 -08 000000035 INF: ===================TDI Scan Setup===================
17-02-28 20:07:12.156 -08 000000035 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:07:12.156 -08 000000035 INF: ===================TDI Scan Setup===================
17-02-28 20:07:12.157 -08 000000035 INF: ======================================
17-02-28 20:07:12.218 -08 000000051 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:07:12.218 -08 000000051 INF: X Motor: Moved to 87.9966 after 499 ms
17-02-28 20:07:12.218 -08 000000051 INF: ======================================
17-02-28 20:07:12.280 -08 000000056 INF: Y Motor: Unshifted Position: 5954689
17-02-28 20:07:12.280 -08 000000056 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:07:12.280 -08 000000056 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:12.342 -08 000000056 INF: Y Motor: Recv v 0\r
17-02-28 20:07:12.342 -08 000000056 INF: Y Motor: Moved to 64.5469 after 499 ms
17-02-28 20:07:12.342 -08 000000056 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:07:12.404 -08 000000056 INF: Y Motor: Recv v 4096\r
17-02-28 20:07:12.404 -08 000000056 INF: Y Motor: Status After move finished OK:
17-02-28 20:07:12.404 -08 000000056 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:12.466 -08 000000056 INF: Y Motor: Recv v 0\r
17-02-28 20:07:12.466 -08 000000056 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:12.466 -08 000000056 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:07:12.469 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:12.469 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 2 of 30 seconds left===================
17-02-28 20:07:12.528 -08 000000056 INF: Y Motor: Recv v 402653184\r
17-02-28 20:07:12.528 -08 000000056 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:07:12.528 -08 000000056 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:07:12.528 -08 000000056 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:07:12.591 -08 000000056 INF: Y Motor: Recv v 0\r
17-02-28 20:07:12.591 -08 000000056 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:07:12.591 -08 000000056 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:07:12.591 -08 000000056 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:12.653 -08 000000056 INF: Y Motor: Recv ok\r
17-02-28 20:07:12.653 -08 000000056 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:07:12.653 -08 000000056 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:12.715 -08 000000056 INF: Y Motor: Recv ok\r
17-02-28 20:07:12.715 -08 000000056 INF: ======================================
17-02-28 20:07:12.716 -08 000000025 INF: ===================Move X,Y===================
17-02-28 20:07:12.717 -08 000000025 INF: ======================================
17-02-28 20:07:12.780 -08 000000085 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:07:12.780 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:07:12.780 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:07:12.795 -08 000000085 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:07:12.797 -08 000000085 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:07:13.469 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:13.469 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 1 of 30 seconds left===================
17-02-28 20:07:13.763 -08 000000085 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:07:13.763 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:07:13.763 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:07:13.778 -08 000000085 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:07:13.779 -08 000000085 INF: ===================Camera Arm TDI===================
17-02-28 20:07:13.781 -08 000000085 INF: ======================================
17-02-28 20:07:13.782 -08 000000103 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:07:13.783 -08 000000103 INF: ======================================
17-02-28 20:07:13.784 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:13.785 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:13.785 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:07:13.785 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:07:13.840 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:07:13.840 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:07:13.900 -08 000000055 INF: FPGA: Recv ZFREQCL
17-02-28 20:07:13.900 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:07:13.900 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:13.900 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:07:13.962 -08 000000065 INF: FPGA: Recv TDIYERD 6454690
17-02-28 20:07:13.962 -08 000000042 INF: Before scan, Y encoder from FPGA = 6454690 counts (64.547 mm)
17-02-28 20:07:13.962 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:13.963 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:13.963 -08 000000025 INF: ===================TDI FPGA Arm===================
17-02-28 20:07:13.963 -08 000000035 INF: ===================Set YMotor gains for scans===================
17-02-28 20:07:13.964 -08 000000035 INF: ======================================
17-02-28 20:07:13.964 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:07:13.965 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:07:13.965 -08 000000025 INF: FPGA: Xmit TDIYPOS 6343763\n
17-02-28 20:07:14.024 -08 000000094 INF: FPGA: Recv TDIYPOS
17-02-28 20:07:14.024 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:07:14.025 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:07:14.026 -08 000000025 INF: FPGA: Xmit TDIYARM3 139264 6434688 1 1\n
17-02-28 20:07:14.086 -08 000000054 INF: FPGA: Recv TDIYARM3
17-02-28 20:07:14.086 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:07:14.087 -08 000000025 INF: ===================TDI FPGA Arm===================
17-02-28 20:07:14.088 -08 000000025 INF: ======================================
17-02-28 20:07:14.089 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:14.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:14.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:14.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:14.091 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:14.092 -08 000000055 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:07:14.092 -08 000000058 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:07:14.092 -08 000000055 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:07:14.092 -08 000000055 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:07:14.092 -08 000000055 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:07:14.092 -08 000000058 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:07:14.092 -08 000000058 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:07:14.092 -08 000000058 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:07:14.092 -08 000000055 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:07:14.093 -08 000000058 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:07:14.433 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:14.433 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:14.433 -08 000000018 INF: WaitCommand(30000) end
17-02-28 20:07:14.433 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:14.434 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:14.434 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:07:14.434 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:07:14.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, FC temperature to 20°===================
17-02-28 20:07:14.461 -08 000000027 INF: FPGA: Recv EX2MV
17-02-28 20:07:14.461 -08 000000027 INF: FPGA: Recv EX1MV
17-02-28 20:07:14.461 -08 000000058 INF: Excitation Filter 1: Moved -107 steps in 368.8371 ms
17-02-28 20:07:14.461 -08 000000058 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.928 ms
17-02-28 20:07:14.461 -08 000000058 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.0352 ms
17-02-28 20:07:14.461 -08 000000055 INF: Excitation Filter 2: Moved -107 steps in 369.0177 ms
17-02-28 20:07:14.461 -08 000000055 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.2121 ms
17-02-28 20:07:14.461 -08 000000055 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.2793 ms
17-02-28 20:07:14.461 -08 000000058 INF: ======================================
17-02-28 20:07:14.461 -08 000000055 INF: ======================================
17-02-28 20:07:14.462 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:14.463 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:14.464 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:07:14.464 -08 000000103 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:14.464 -08 000000004 INF: ===================FPGA Z Wait===================
17-02-28 20:07:14.464 -08 000000051 INF: ===================Move Y Motor without settling===================
17-02-28 20:07:14.464 -08 000000004 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:07:14.465 -08 000000051 INF: Y Motor: Moving to 14.8985 mm @6.500 mm/sec, started at 64.5469 mm
17-02-28 20:07:14.465 -08 000000051 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:07:14.465 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:14.465 -08 000000085 INF: ===================Camera TDI, Parallel===================
17-02-28 20:07:14.465 -08 000000103 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:07:14.466 -08 000000096 INF: ===================Camera TDI===================
17-02-28 20:07:14.466 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:07:14.467 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:14.467 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:14.468 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:14.468 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:14.471 -08 000000103 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:07:14.525 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:07:14.525 -08 000000051 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:07:14.525 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:14.587 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:07:14.587 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:14.617 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:14.617 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:14.618 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:14.618 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:14.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:07:14.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:07:14.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:07:14.648 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:07:14.648 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:14.648 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:14.649 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:14.649 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:14.650 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:07:14.650 -08 000000051 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:14.650 -08 000000051 INF: Y Motor: Set target position to 989854 encoder counts
17-02-28 20:07:14.650 -08 000000051 INF: Y Motor: Xmit s r0xca 989854\r
17-02-28 20:07:14.711 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:07:14.711 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Selecting Reagent HB2 (8)===================
17-02-28 20:07:14.711 -08 000000018 INF: Valve A1: Go to position 8
17-02-28 20:07:14.711 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:07:14.713 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:07:14.713 -08 000000051 INF: Y Motor: Start the move command
17-02-28 20:07:14.713 -08 000000051 INF: Y Motor: Xmit t 1\r
17-02-28 20:07:14.767 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:14.767 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:14.768 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:14.768 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:14.773 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 1\r
17-02-28 20:07:14.773 -08 000000018 INF: Valve A1: 111.084 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:07:14.773 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 1 to 8
17-02-28 20:07:14.773 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC8\r
17-02-28 20:07:14.773 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:07:14.773 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:07:14.774 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:07:14.774 -08 000000051 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:07:14.774 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:14.837 -08 000000092 INF: FPGA: Recv ZWAIT 
17-02-28 20:07:14.837 -08 000000004 INF: ======================================
17-02-28 20:07:14.901 -08 000000051 INF: Y Motor: Unshifted Position: 5891533
17-02-28 20:07:14.917 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:07:14.917 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:07:14.917 -08 000000096 INF: ===================Camera #0 Frame #4===================
17-02-28 20:07:14.918 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:07:14.918 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:07:14.918 -08 000000100 INF: ===================Camera #2 Frame #5===================
17-02-28 20:07:14.951 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:15.075 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:15.080 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:07:15.080 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:07:15.080 -08 000000096 INF: ===================Camera #0 Frame #10===================
17-02-28 20:07:15.085 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:07:15.085 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:07:15.085 -08 000000100 INF: ===================Camera #2 Frame #11===================
17-02-28 20:07:15.212 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 8\r
17-02-28 20:07:15.212 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:15.212 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:07:15.213 -08 000000051 INF: Y Motor: Unshifted Position: 5690038
17-02-28 20:07:15.249 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:07:15.249 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:07:15.249 -08 000000096 INF: ===================Camera #0 Frame #17===================
17-02-28 20:07:15.254 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:07:15.254 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:07:15.254 -08 000000100 INF: ===================Camera #2 Frame #17===================
17-02-28 20:07:15.263 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:15.388 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:15.420 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:07:15.420 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:07:15.420 -08 000000096 INF: ===================Camera #0 Frame #23===================
17-02-28 20:07:15.423 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:07:15.423 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:07:15.423 -08 000000100 INF: ===================Camera #2 Frame #23===================
17-02-28 20:07:15.524 -08 000000051 INF: Y Motor: Unshifted Position: 5485293
17-02-28 20:07:15.574 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:15.588 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:07:15.588 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:07:15.588 -08 000000096 INF: ===================Camera #0 Frame #29===================
17-02-28 20:07:15.592 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:07:15.592 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:07:15.592 -08 000000100 INF: ===================Camera #2 Frame #29===================
17-02-28 20:07:15.698 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:15.707 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:15.708 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:07:15.708 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:15.756 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:07:15.756 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:07:15.756 -08 000000096 INF: ===================Camera #0 Frame #35===================
17-02-28 20:07:15.761 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:07:15.761 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:07:15.761 -08 000000100 INF: ===================Camera #2 Frame #36===================
17-02-28 20:07:15.774 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:07:15.782 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 60, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:07:15.837 -08 000000051 INF: Y Motor: Unshifted Position: 5282922
17-02-28 20:07:15.874 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:07:15.887 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:15.925 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:07:15.925 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:07:15.925 -08 000000096 INF: ===================Camera #0 Frame #42===================
17-02-28 20:07:15.933 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:07:15.933 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:07:15.933 -08 000000100 INF: ===================Camera #2 Frame #42===================
17-02-28 20:07:15.960 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:07:15.960 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:07:16.011 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:16.060 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:07:16.097 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:07:16.097 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:07:16.097 -08 000000096 INF: ===================Camera #0 Frame #48===================
17-02-28 20:07:16.102 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:07:16.102 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:07:16.102 -08 000000100 INF: ===================Camera #2 Frame #48===================
17-02-28 20:07:16.146 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:16.147 -08 000000051 INF: Y Motor: Unshifted Position: 5081199
17-02-28 20:07:16.198 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:16.247 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:16.267 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:07:16.267 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:07:16.267 -08 000000096 INF: ===================Camera #0 Frame #54===================
17-02-28 20:07:16.272 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:07:16.272 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:07:16.272 -08 000000100 INF: ===================Camera #2 Frame #54===================
17-02-28 20:07:16.274 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:16.325 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:16.436 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:07:16.436 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:07:16.436 -08 000000096 INF: ===================Camera #0 Frame #60===================
17-02-28 20:07:16.441 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:07:16.441 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:07:16.441 -08 000000100 INF: ===================Camera #2 Frame #61===================
17-02-28 20:07:16.463 -08 000000051 INF: Y Motor: Unshifted Position: 4877747
17-02-28 20:07:16.513 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:16.524 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:16.585 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:07:16.605 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:07:16.605 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:07:16.605 -08 000000096 INF: ===================Camera #0 Frame #67===================
17-02-28 20:07:16.613 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:07:16.613 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:07:16.613 -08 000000100 INF: ===================Camera #2 Frame #67===================
17-02-28 20:07:16.636 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:16.685 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:07:16.773 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:16.774 -08 000000051 INF: Y Motor: Unshifted Position: 4676032
17-02-28 20:07:16.777 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:07:16.777 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:07:16.777 -08 000000096 INF: ===================Camera #0 Frame #73===================
17-02-28 20:07:16.782 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:07:16.782 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:07:16.782 -08 000000100 INF: ===================Camera #2 Frame #73===================
17-02-28 20:07:16.824 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:16.873 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:16.897 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:07:16.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:07:16.945 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:07:16.945 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:07:16.945 -08 000000096 INF: ===================Camera #0 Frame #79===================
17-02-28 20:07:16.948 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:16.951 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:07:16.951 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:07:16.951 -08 000000100 INF: ===================Camera #2 Frame #79===================
17-02-28 20:07:16.997 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP11520R\r
17-02-28 20:07:17.085 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:17.086 -08 000000051 INF: Y Motor: Unshifted Position: 4473223
17-02-28 20:07:17.114 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:07:17.114 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:07:17.114 -08 000000096 INF: ===================Camera #0 Frame #85===================
17-02-28 20:07:17.120 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:07:17.120 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:07:17.120 -08 000000100 INF: ===================Camera #2 Frame #86===================
17-02-28 20:07:17.136 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:17.185 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:17.261 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:17.271 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:17.282 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:07:17.282 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:07:17.282 -08 000000096 INF: ===================Camera #0 Frame #92===================
17-02-28 20:07:17.293 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:07:17.293 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:07:17.293 -08 000000100 INF: ===================Camera #2 Frame #92===================
17-02-28 20:07:17.396 -08 000000051 INF: Y Motor: Unshifted Position: 4268912
17-02-28 20:07:17.446 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:17.454 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:07:17.454 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:07:17.454 -08 000000096 INF: ===================Camera #0 Frame #98===================
17-02-28 20:07:17.462 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:07:17.462 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:07:17.462 -08 000000100 INF: ===================Camera #2 Frame #98===================
17-02-28 20:07:17.521 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:17.572 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:17.584 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:17.623 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:07:17.623 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:07:17.623 -08 000000096 INF: ===================Camera #0 Frame #104===================
17-02-28 20:07:17.631 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:07:17.631 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:07:17.631 -08 000000100 INF: ===================Camera #2 Frame #104===================
17-02-28 20:07:17.710 -08 000000051 INF: Y Motor: Unshifted Position: 4067406
17-02-28 20:07:17.760 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:17.792 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:07:17.792 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:07:17.792 -08 000000096 INF: ===================Camera #0 Frame #110===================
17-02-28 20:07:17.800 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:07:17.800 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:07:17.800 -08 000000100 INF: ===================Camera #2 Frame #111===================
17-02-28 20:07:17.834 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:17.884 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:17.896 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:17.961 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:07:17.961 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:07:17.961 -08 000000096 INF: ===================Camera #0 Frame #117===================
17-02-28 20:07:17.973 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:07:17.973 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:07:17.973 -08 000000100 INF: ===================Camera #2 Frame #117===================
17-02-28 20:07:18.020 -08 000000051 INF: Y Motor: Unshifted Position: 3864388
17-02-28 20:07:18.070 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:18.133 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:07:18.133 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:07:18.133 -08 000000096 INF: ===================Camera #0 Frame #123===================
17-02-28 20:07:18.142 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:07:18.142 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:07:18.142 -08 000000100 INF: ===================Camera #2 Frame #123===================
17-02-28 20:07:18.146 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:18.196 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:18.207 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:18.302 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:07:18.302 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:07:18.302 -08 000000096 INF: ===================Camera #0 Frame #129===================
17-02-28 20:07:18.311 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:07:18.311 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:07:18.311 -08 000000100 INF: ===================Camera #2 Frame #129===================
17-02-28 20:07:18.335 -08 000000051 INF: Y Motor: Unshifted Position: 3660935
17-02-28 20:07:18.385 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:18.457 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:18.471 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:07:18.471 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:07:18.471 -08 000000096 INF: ===================Camera #0 Frame #135===================
17-02-28 20:07:18.481 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:07:18.481 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:07:18.481 -08 000000100 INF: ===================Camera #2 Frame #136===================
17-02-28 20:07:18.508 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:18.519 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:18.640 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:07:18.640 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:07:18.640 -08 000000096 INF: ===================Camera #0 Frame #142===================
17-02-28 20:07:18.647 -08 000000051 INF: Y Motor: Unshifted Position: 3457923
17-02-28 20:07:18.654 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:07:18.654 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:07:18.654 -08 000000100 INF: ===================Camera #2 Frame #142===================
17-02-28 20:07:18.697 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:18.769 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:18.811 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:07:18.811 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:07:18.811 -08 000000096 INF: ===================Camera #0 Frame #148===================
17-02-28 20:07:18.820 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:18.823 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:07:18.823 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:07:18.823 -08 000000100 INF: ===================Camera #2 Frame #148===================
17-02-28 20:07:18.831 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:18.956 -08 000000051 INF: Y Motor: Unshifted Position: 3255126
17-02-28 20:07:18.980 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:07:18.980 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:07:18.980 -08 000000096 INF: ===================Camera #0 Frame #154===================
17-02-28 20:07:18.992 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:07:18.992 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:07:18.992 -08 000000100 INF: ===================Camera #2 Frame #154===================
17-02-28 20:07:19.006 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:19.081 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:19.132 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:19.143 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:19.149 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:07:19.149 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:07:19.149 -08 000000096 INF: ===================Camera #0 Frame #160===================
17-02-28 20:07:19.162 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:07:19.162 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:07:19.162 -08 000000100 INF: ===================Camera #2 Frame #161===================
17-02-28 20:07:19.271 -08 000000051 INF: Y Motor: Unshifted Position: 3052112
17-02-28 20:07:19.318 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 165, frameCount = 166.
17-02-28 20:07:19.318 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 166
17-02-28 20:07:19.318 -08 000000096 INF: ===================Camera #0 Frame #166===================
17-02-28 20:07:19.321 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:19.335 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:07:19.335 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:07:19.335 -08 000000100 INF: ===================Camera #2 Frame #167===================
17-02-28 20:07:19.393 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:19.445 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:19.456 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:19.488 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:07:19.488 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:07:19.488 -08 000000096 INF: ===================Camera #0 Frame #173===================
17-02-28 20:07:19.505 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:07:19.505 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:07:19.505 -08 000000100 INF: ===================Camera #2 Frame #173===================
17-02-28 20:07:19.582 -08 000000051 INF: Y Motor: Unshifted Position: 2848669
17-02-28 20:07:19.632 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:19.661 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:07:19.661 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:07:19.661 -08 000000096 INF: ===================Camera #0 Frame #179===================
17-02-28 20:07:19.675 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:07:19.675 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:07:19.675 -08 000000100 INF: ===================Camera #2 Frame #180===================
17-02-28 20:07:19.706 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:19.757 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:19.766 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:19.831 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 184, frameCount = 185.
17-02-28 20:07:19.831 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 185
17-02-28 20:07:19.831 -08 000000096 INF: ===================Camera #0 Frame #185===================
17-02-28 20:07:19.848 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:07:19.848 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:07:19.848 -08 000000100 INF: ===================Camera #2 Frame #186===================
17-02-28 20:07:19.894 -08 000000051 INF: Y Motor: Unshifted Position: 2646303
17-02-28 20:07:19.944 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:20.001 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:07:20.001 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:07:20.001 -08 000000096 INF: ===================Camera #0 Frame #192===================
17-02-28 20:07:20.016 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:20.018 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:07:20.018 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:07:20.018 -08 000000100 INF: ===================Camera #2 Frame #192===================
17-02-28 20:07:20.068 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:20.078 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:20.173 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:07:20.173 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:07:20.173 -08 000000096 INF: ===================Camera #0 Frame #198===================
17-02-28 20:07:20.188 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:07:20.188 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:07:20.188 -08 000000100 INF: ===================Camera #2 Frame #199===================
17-02-28 20:07:20.204 -08 000000051 INF: Y Motor: Unshifted Position: 2444156
17-02-28 20:07:20.254 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:20.328 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:20.342 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-02-28 20:07:20.342 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-02-28 20:07:20.342 -08 000000096 INF: ===================Camera #0 Frame #204===================
17-02-28 20:07:20.362 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:07:20.362 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:07:20.362 -08 000000100 INF: ===================Camera #2 Frame #205===================
17-02-28 20:07:20.380 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:20.391 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:20.512 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210.
17-02-28 20:07:20.512 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210
17-02-28 20:07:20.512 -08 000000096 INF: ===================Camera #0 Frame #210===================
17-02-28 20:07:20.519 -08 000000051 INF: Y Motor: Unshifted Position: 2240488
17-02-28 20:07:20.533 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:07:20.533 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:07:20.533 -08 000000100 INF: ===================Camera #2 Frame #211===================
17-02-28 20:07:20.569 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:20.641 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:20.681 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:07:20.681 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:07:20.681 -08 000000096 INF: ===================Camera #0 Frame #217===================
17-02-28 20:07:20.692 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:20.704 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:20.705 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:07:20.705 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:07:20.705 -08 000000100 INF: ===================Camera #2 Frame #218===================
17-02-28 20:07:20.831 -08 000000051 INF: Y Motor: Unshifted Position: 2038123
17-02-28 20:07:20.854 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:07:20.854 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:07:20.854 -08 000000096 INF: ===================Camera #0 Frame #223===================
17-02-28 20:07:20.879 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:07:20.879 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:07:20.879 -08 000000100 INF: ===================Camera #2 Frame #224===================
17-02-28 20:07:20.881 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:20.954 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:21.002 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:21.016 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:21.024 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 228, frameCount = 229.
17-02-28 20:07:21.024 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 229
17-02-28 20:07:21.024 -08 000000096 INF: ===================Camera #0 Frame #229===================
17-02-28 20:07:21.050 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:07:21.050 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:07:21.050 -08 000000100 INF: ===================Camera #2 Frame #230===================
17-02-28 20:07:21.141 -08 000000051 INF: Y Motor: Unshifted Position: 1833371
17-02-28 20:07:21.191 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:21.194 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:07:21.194 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:07:21.194 -08 000000096 INF: ===================Camera #0 Frame #236===================
17-02-28 20:07:21.220 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:07:21.220 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:07:21.220 -08 000000100 INF: ===================Camera #2 Frame #237===================
17-02-28 20:07:21.266 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:21.316 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:21.328 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:21.367 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:07:21.367 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:07:21.367 -08 000000096 INF: ===================Camera #0 Frame #242===================
17-02-28 20:07:21.394 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:07:21.394 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:07:21.394 -08 000000100 INF: ===================Camera #2 Frame #243===================
17-02-28 20:07:21.455 -08 000000051 INF: Y Motor: Unshifted Position: 1632301
17-02-28 20:07:21.505 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:21.537 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:07:21.537 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:07:21.537 -08 000000096 INF: ===================Camera #0 Frame #248===================
17-02-28 20:07:21.565 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:07:21.565 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:07:21.565 -08 000000100 INF: ===================Camera #2 Frame #249===================
17-02-28 20:07:21.578 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:21.628 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:21.640 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:21.707 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 253, frameCount = 254.
17-02-28 20:07:21.707 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 254
17-02-28 20:07:21.707 -08 000000096 INF: ===================Camera #0 Frame #254===================
17-02-28 20:07:21.735 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:07:21.735 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:07:21.735 -08 000000100 INF: ===================Camera #2 Frame #255===================
17-02-28 20:07:21.764 -08 000000051 INF: Y Motor: Unshifted Position: 1428200
17-02-28 20:07:21.814 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:21.877 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:07:21.877 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:07:21.877 -08 000000096 INF: ===================Camera #0 Frame #261===================
17-02-28 20:07:21.890 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:21.906 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:07:21.906 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:07:21.906 -08 000000100 INF: ===================Camera #2 Frame #262===================
17-02-28 20:07:21.940 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:21.950 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:22.050 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:07:22.050 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:07:22.050 -08 000000096 INF: ===================Camera #0 Frame #267===================
17-02-28 20:07:22.078 -08 000000051 INF: Y Motor: Unshifted Position: 1226684
17-02-28 20:07:22.080 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:07:22.080 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:07:22.080 -08 000000100 INF: ===================Camera #2 Frame #268===================
17-02-28 20:07:22.128 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:22.200 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:22.200 -08 000000077 INF: FPGA: Recv TDIYWAIT
17-02-28 20:07:22.200 -08 000000103 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:22.202 -08 000000103 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:07:22.203 -08 000000081 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:07:22.203 -08 000000065 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:07:22.203 -08 000000081 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:07:22.203 -08 000000081 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:07:22.203 -08 000000081 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:07:22.203 -08 000000081 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:07:22.203 -08 000000065 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:07:22.203 -08 000000065 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:07:22.203 -08 000000065 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:07:22.204 -08 000000065 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:07:22.220 -08 000000096 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:07:22.220 -08 000000096 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:07:22.220 -08 000000096 INF: ===================Camera #0 Frame #272===================
17-02-28 20:07:22.237 -08 000000096 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:07:22.238 -08 000000096 INF: ===================CameraTDI Cleanup===================
17-02-28 20:07:22.253 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:22.262 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:22.388 -08 000000051 INF: Y Motor: Unshifted Position: 1023671
17-02-28 20:07:22.401 -08 000000096 INF: Camera #0 ReleaseBuffer
17-02-28 20:07:22.401 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:07:22.401 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:07:22.401 -08 000000100 INF: ===================Camera #2 Frame #272===================
17-02-28 20:07:22.401 -08 000000096 INF: ===================Camera TDI===================
17-02-28 20:07:22.413 -08 000000100 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:07:22.414 -08 000000100 INF: ===================CameraTDI Cleanup===================
17-02-28 20:07:22.430 -08 000000096 INF: ======================================
17-02-28 20:07:22.438 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:22.512 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:22.574 -08 000000077 INF: FPGA: Recv EX1MV
17-02-28 20:07:22.574 -08 000000077 INF: FPGA: Recv EX2MV
17-02-28 20:07:22.574 -08 000000065 INF: Excitation Filter 2: Moved 107 steps in 370.7612 ms
17-02-28 20:07:22.574 -08 000000081 INF: Excitation Filter 1: Moved 107 steps in 370.9756 ms
17-02-28 20:07:22.574 -08 000000081 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.1144 ms
17-02-28 20:07:22.574 -08 000000081 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.1862 ms
17-02-28 20:07:22.574 -08 000000065 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.8954 ms
17-02-28 20:07:22.574 -08 000000065 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.2698 ms
17-02-28 20:07:22.575 -08 000000081 INF: ======================================
17-02-28 20:07:22.575 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:22.575 -08 000000065 INF: ======================================
17-02-28 20:07:22.576 -08 000000051 INF: Y Motor: Unshifted Position: 989854
17-02-28 20:07:22.576 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:07:22.576 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:22.576 -08 000000103 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:22.577 -08 000000103 INF: ======================================
17-02-28 20:07:22.612 -08 000000100 INF: Camera #2 ReleaseBuffer
17-02-28 20:07:22.612 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:07:22.638 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:07:22.638 -08 000000051 INF: Y Motor: Moved to 14.8985 after 7864 ms
17-02-28 20:07:22.638 -08 000000051 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:07:22.647 -08 000000100 INF: ======================================
17-02-28 20:07:22.648 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:07:22.649 -08 000000085 INF: ======================================
17-02-28 20:07:22.703 -08 000000051 INF: Y Motor: Recv v 4097\r
17-02-28 20:07:22.703 -08 000000051 INF: Y Motor: Status After move finished OK:
17-02-28 20:07:22.703 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:22.764 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:07:22.764 -08 000000051 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:22.764 -08 000000051 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:07:22.825 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:22.827 -08 000000051 INF: Y Motor: Recv v 134217728\r
17-02-28 20:07:22.827 -08 000000051 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:07:22.827 -08 000000051 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:07:22.827 -08 000000051 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:07:22.886 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:22.887 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:07:22.887 -08 000000051 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:07:22.887 -08 000000051 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:07:22.887 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:22.951 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:07:22.951 -08 000000051 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:07:22.951 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:23.013 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:07:23.013 -08 000000051 INF: ======================================
17-02-28 20:07:23.014 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:23.015 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:23.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:23.016 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:07:23.075 -08 000000100 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:07:23.075 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:07:23.135 -08 000000023 INF: FPGA: Recv TDIYERD 1489855
17-02-28 20:07:23.135 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:07:23.136 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:23.198 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:23.198 -08 000000068 INF: FPGA: Recv ZADCR 34998
17-02-28 20:07:23.198 -08 000000042 INF: At scan end Y pos = 14.899 and Z pos = -0.134. Y moved -48.539 mm
17-02-28 20:07:23.198 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:07:23.259 -08 000000078 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:07:23.259 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:07:23.259 -08 000000042 INF: TDIScan finished after 11770.2275 ms
17-02-28 20:07:23.259 -08 000000042 INF: Image[0]: Y should trigger at 63.438 mm, 2nd row was at 64.347 mm (error = 0.909 mm)
17-02-28 20:07:23.259 -08 000000042 INF: Image[2]: Y should trigger at 63.438 mm, 2nd row was at 64.347 mm (error = 0.909 mm)
17-02-28 20:07:23.261 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:23.295 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.639 um
17-02-28 20:07:23.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:23.296 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:07:23.325 -08 000000055 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:07:23.325 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:23.326 -08 000000091 INF: ===================Dither Clean Up Command===================
17-02-28 20:07:23.326 -08 000000100 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:07:23.326 -08 000000036 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:07:23.326 -08 000000096 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:07:23.326 -08 000000036 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:07:23.327 -08 000000036 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:07:23.327 -08 000000096 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:07:23.327 -08 000000096 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:07:23.327 -08 000000051 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:07:23.327 -08 000000100 INF: ======================================
17-02-28 20:07:23.327 -08 000000009 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:07:23.327 -08 000000009 INF: ======================================
17-02-28 20:07:23.328 -08 000000051 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:07:23.386 -08 000000094 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:23.386 -08 000000094 INF: FPGA: Recv ZSEL 
17-02-28 20:07:23.386 -08 000000051 INF: FPGA: Xmit ZDACW 41974\n
17-02-28 20:07:23.386 -08 000000096 INF: ======================================
17-02-28 20:07:23.388 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:07:23.388 -08 000000036 INF: ======================================
17-02-28 20:07:23.448 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:23.451 -08 000000103 INF: FPGA: Recv ZDACW 
17-02-28 20:07:23.451 -08 000000051 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:07:23.451 -08 000000051 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:07:23.510 -08 000000073 INF: FPGA: Recv TDIBB
17-02-28 20:07:23.510 -08 000000051 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:07:23.511 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:23.511 -08 000000051 INF: ======================================
17-02-28 20:07:23.512 -08 000000091 INF: ======================================
17-02-28 20:07:23.513 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:23.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:07:23.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:23.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:07:23.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:23.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:07:23.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:23.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:07:23.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:23.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308===================
17-02-28 20:07:23.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308===================
17-02-28 20:07:23.516 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:07:23.516 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:07:23.516 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:07:23.517 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308===================
17-02-28 20:07:23.539 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:07:23.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:23.540 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308===================
17-02-28 20:07:23.540 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:23.540 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308===================
17-02-28 20:07:23.540 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:07:23.540 -08 000000042 INF: Transformed XStagePosition from 89.09464 mm to 89.097050009761 mm.
17-02-28 20:07:23.552 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5486043555439 mm.
17-02-28 20:07:23.552 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3486043555439 mm.
17-02-28 20:07:23.552 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4393543555438 mm.
17-02-28 20:07:23.554 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:23.555 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:07:23.555 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:23.555 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -160.1 um, section = H_1
17-02-28 20:07:23.556 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:23.557 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:23.558 -08 000000089 INF: ===================MoveEmissionFilters===================
17-02-28 20:07:23.559 -08 000000094 INF: ===================Move X,Y===================
17-02-28 20:07:23.560 -08 000000094 INF: ===================Move X,Y, Parallel===================
17-02-28 20:07:23.561 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:07:23.562 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:07:23.674 -08 000000095 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:07:23.675 -08 000000095 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:07:23.676 -08 000000057 INF: ===================Move X Motor without settling===================
17-02-28 20:07:23.677 -08 000000057 INF: X Motor: Xmit PR VM\n
17-02-28 20:07:23.677 -08 000000046 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:07:23.678 -08 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:07:23.678 -08 000000046 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:07:23.680 -08 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:07:23.681 -08 000000045 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:07:23.681 -08 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:07:23.683 -08 000000009 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1102 Request: {"Cycle":2,"Lane":8,"Tile":1102,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF215","HCSMMF278","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.686 -08 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:07:23.690 -08 000000023 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:07:23.691 -08 000000054 INF: ===================Move Y Motor without settling===================
17-02-28 20:07:23.691 -08 000000054 INF: Y Motor: Moving to 64.5486 mm @25.000 mm/sec, started at 14.8985 mm
17-02-28 20:07:23.691 -08 000000098 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:07:23.691 -08 000000023 INF: ======================================
17-02-28 20:07:23.692 -08 000000054 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:07:23.692 -08 000000054 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:23.692 -08 000000098 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:07:23.693 -08 000000098 INF: ======================================
17-02-28 20:07:23.694 -08 000000037 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:07:23.694 -08 000000037 INF: ======================================
17-02-28 20:07:23.705 -08 000000023 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:07:23.713 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:07:23.714 -08 000000027 INF: ===================TDI Scan Setup===================
17-02-28 20:07:23.714 -08 000000023 INF: ======================================
17-02-28 20:07:23.715 -08 000000062 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:07:23.715 -08 000000091 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:07:23.716 -08 000000091 INF: ======================================
17-02-28 20:07:23.716 -08 000000051 INF: ======================================
17-02-28 20:07:23.716 -08 000000027 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:23.717 -08 000000062 INF: ======================================
17-02-28 20:07:23.719 -08 000000027 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:07:23.720 -08 000000027 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:07:23.721 -08 000000027 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:07:23.721 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:07:23.723 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:07:23.724 -08 000000067 INF: ===================Camera Arm TDI===================
17-02-28 20:07:23.725 -08 000000095 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:07:23.726 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:07:23.727 -08 000000064 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:07:23.727 -08 000000086 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:07:23.727 -08 000000095 INF: ======================================
17-02-28 20:07:23.728 -08 000000086 INF: ======================================
17-02-28 20:07:23.728 -08 000000064 INF: ======================================
17-02-28 20:07:23.729 -08 000000067 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:07:23.732 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:07:23.734 -08 000000055 INF: ======================================
17-02-28 20:07:23.740 -08 000000046 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:07:23.742 -08 000000046 INF: ======================================
17-02-28 20:07:23.744 -08 000000089 INF: ======================================
17-02-28 20:07:23.752 -08 000000070 INF: FPGA: Recv ZSEL 
17-02-28 20:07:23.753 -08 000000057 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:07:23.753 -08 000000057 INF: X Motor: Xmit PR VI\n
17-02-28 20:07:23.754 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:07:23.754 -08 000000054 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:07:23.754 -08 000000054 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:23.761 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:23.786 -08 000000027 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:07:23.786 -08 000000027 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:07:23.789 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1105 Request: {"Cycle":2,"Lane":8,"Tile":1105,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF239","HCSMMF207","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.792 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1111 Request: {"Cycle":2,"Lane":8,"Tile":1111,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF213","HCSMMF230","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.804 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1109 Request: {"Cycle":2,"Lane":8,"Tile":1109,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF260","HCSMMF194","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.806 -08 000000031 INF: FPGA: Recv TDIBB
17-02-28 20:07:23.807 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:23.807 -08 000000027 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:07:23.808 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:07:23.808 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:23.809 -08 000000057 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:07:23.809 -08 000000057 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:07:23.809 -08 000000057 INF: X Motor: Moving to 89.0971 mm @15.000 mm/sec, started at 87.9966 mm
17-02-28 20:07:23.809 -08 000000057 INF: X Motor: Xmit MA 12328\n
17-02-28 20:07:23.809 -08 000000027 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:07:23.810 -08 000000027 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:23.810 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1106 Request: {"Cycle":2,"Lane":8,"Tile":1106,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF201","HCSMMF214","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.812 -08 000000027 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:07:23.812 -08 000000027 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:07:23.813 -08 000000027 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:07:23.814 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1103 Request: {"Cycle":2,"Lane":8,"Tile":1103,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF187","HCSMMF216","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.821 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1110 Request: {"Cycle":2,"Lane":8,"Tile":1110,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF220","HCSMMF233","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.822 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1101 Request: {"Cycle":2,"Lane":8,"Tile":1101,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF179","HCSMMF245","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.823 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1107 Request: {"Cycle":2,"Lane":8,"Tile":1107,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF235","HCSMMF262","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.825 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1104 Request: {"Cycle":2,"Lane":8,"Tile":1104,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF197","HCSMMF241","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.825 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1117 Request: {"Cycle":2,"Lane":8,"Tile":1117,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF281","HCSMMF269","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.826 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1114 Request: {"Cycle":2,"Lane":8,"Tile":1114,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF223","HCSMMF234","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.827 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1112 Request: {"Cycle":2,"Lane":8,"Tile":1112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF177","HCSMMF212","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.827 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1115 Request: {"Cycle":2,"Lane":8,"Tile":1115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF242","HCSMMF248","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.828 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1108 Request: {"Cycle":2,"Lane":8,"Tile":1108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF189","HCSMMF253","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.829 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1116 Request: {"Cycle":2,"Lane":8,"Tile":1116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF178","HCSMMF280","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.829 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1118 Request: {"Cycle":2,"Lane":8,"Tile":1118,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF203","HCSMMF229","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.830 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1126 Request: {"Cycle":2,"Lane":8,"Tile":1126,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF283","HCSMMF219","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.831 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1113 Request: {"Cycle":2,"Lane":8,"Tile":1113,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF277","HCSMMF186","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.831 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1119 Request: {"Cycle":2,"Lane":8,"Tile":1119,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF180","HCSMMF185","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.832 -08 000000004 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1121 Request: {"Cycle":2,"Lane":8,"Tile":1121,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF181","HCSMMF243","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.833 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1128 Request: {"Cycle":2,"Lane":8,"Tile":1128,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF225","HCSMMF176","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.834 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1122 Request: {"Cycle":2,"Lane":8,"Tile":1122,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF188","HCSMMF237","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.835 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1124 Request: {"Cycle":2,"Lane":8,"Tile":1124,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF279","HCSMMF184","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.836 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1123 Request: {"Cycle":2,"Lane":8,"Tile":1123,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF284","HCSMMF205","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.837 -08 000000103 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1125 Request: {"Cycle":2,"Lane":8,"Tile":1125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF272","HCSMMF190","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.839 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1120 Request: {"Cycle":2,"Lane":8,"Tile":1120,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF270","HCSMMF227","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.841 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1127 Request: {"Cycle":2,"Lane":8,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF271","HCSMMF218","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:23.843 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:23.849 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:07:23.867 -08 000000078 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:23.867 -08 000000027 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:23.869 -08 000000057 INF: X Motor: Recv MA 12328\r\n>
17-02-28 20:07:23.869 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:07:23.869 -08 000000054 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:23.869 -08 000000027 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:07:23.869 -08 000000054 INF: Y Motor: Set target position to 5954860 encoder counts
17-02-28 20:07:23.869 -08 000000054 INF: Y Motor: Xmit s r0xca 5954860\r
17-02-28 20:07:23.869 -08 000000027 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:23.870 -08 000000057 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:07:23.871 -08 000000027 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:07:23.871 -08 000000027 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:07:23.871 -08 000000027 INF: Z Motor: Arming to move to -0.1201 mm
17-02-28 20:07:23.871 -08 000000027 INF: FPGA: Xmit ZYT 6434860 4\n
17-02-28 20:07:23.931 -08 000000053 INF: FPGA: Recv ZYT 
17-02-28 20:07:23.931 -08 000000027 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1489854 enc / 14.899 mm / ) = 6434860 enc / 64.349 mm
17-02-28 20:07:23.931 -08 000000027 INF: FPGA: Xmit ZARM 31488\n
17-02-28 20:07:23.933 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:07:23.933 -08 000000054 INF: Y Motor: Start the move command
17-02-28 20:07:23.933 -08 000000054 INF: Y Motor: Xmit t 1\r
17-02-28 20:07:23.937 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:23.937 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:07:23.975 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:23.981 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:07:23.992 -08 000000036 INF: FPGA: Recv ZARM
17-02-28 20:07:23.992 -08 000000027 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.7745 ms
17-02-28 20:07:23.992 -08 000000027 INF: Z Motor: ArmAbsStepped took 120.8107 ms
17-02-28 20:07:23.992 -08 000000027 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:23.993 -08 000000027 INF: ===================TDI Scan Setup===================
17-02-28 20:07:23.994 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:07:23.994 -08 000000054 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:07:23.994 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:23.995 -08 000000027 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:07:23.995 -08 000000027 INF: ===================TDI Scan Setup===================
17-02-28 20:07:23.997 -08 000000027 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:07:23.997 -08 000000027 INF: ===================TDI Scan Setup===================
17-02-28 20:07:23.998 -08 000000027 INF: ======================================
17-02-28 20:07:24.057 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:24.067 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:24.073 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:07:24.118 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:24.119 -08 000000054 INF: Y Motor: Unshifted Position: 1076428
17-02-28 20:07:24.169 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:24.295 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:24.313 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:24.319 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:07:24.325 -08 000000067 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:07:24.325 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:07:24.325 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:07:24.340 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:07:24.342 -08 000000067 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:07:24.368 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:24.415 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:24.432 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:24.433 -08 000000054 INF: Y Motor: Unshifted Position: 1781511
17-02-28 20:07:24.483 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:24.494 -08 000000057 INF: X Motor: Xmit PR ER\n
17-02-28 20:07:24.560 -08 000000057 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:07:24.560 -08 000000057 INF: X Motor: Moved to 89.0977 after 690 ms
17-02-28 20:07:24.560 -08 000000057 INF: ======================================
17-02-28 20:07:24.608 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:24.682 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:24.696 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:07:24.743 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:24.744 -08 000000054 INF: Y Motor: Unshifted Position: 2557385
17-02-28 20:07:24.794 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:24.923 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:24.939 -08 000000067 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:07:24.939 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:07:24.939 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:07:24.954 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:07:24.956 -08 000000067 INF: ===================Camera Arm TDI===================
17-02-28 20:07:24.957 -08 000000067 INF: ======================================
17-02-28 20:07:24.958 -08 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:07:24.960 -08 000000045 INF: ======================================
17-02-28 20:07:24.993 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:25.056 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:07:25.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:07:25.057 -08 000000054 INF: Y Motor: Unshifted Position: 3342312
17-02-28 20:07:25.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:07:25.057 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:07:25.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:07:25.107 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:25.230 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:25.368 -08 000000054 INF: Y Motor: Unshifted Position: 4120719
17-02-28 20:07:25.418 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:25.544 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:25.679 -08 000000054 INF: Y Motor: Unshifted Position: 4898160
17-02-28 20:07:25.729 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:25.856 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:25.992 -08 000000054 INF: Y Motor: Unshifted Position: 5677743
17-02-28 20:07:26.042 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:26.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:07:26.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:07:26.164 -08 000000057 INF: RunCopyService queue size at 2/28/2017 8:07:26 PM is 2
17-02-28 20:07:26.167 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:26.306 -08 000000054 INF: Y Motor: Unshifted Position: 5954861
17-02-28 20:07:26.306 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:07:26.306 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:26.367 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:07:26.367 -08 000000054 INF: Y Motor: Moved to 64.5486 after 2372 ms
17-02-28 20:07:26.367 -08 000000054 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:07:26.429 -08 000000054 INF: Y Motor: Recv v 4096\r
17-02-28 20:07:26.429 -08 000000054 INF: Y Motor: Status After move finished OK:
17-02-28 20:07:26.429 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:26.493 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:07:26.493 -08 000000054 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:26.493 -08 000000054 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:07:26.557 -08 000000054 INF: Y Motor: Recv v 402653184\r
17-02-28 20:07:26.557 -08 000000054 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:07:26.557 -08 000000054 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:07:26.557 -08 000000054 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:07:26.618 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:07:26.618 -08 000000054 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:07:26.618 -08 000000054 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:07:26.618 -08 000000054 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:26.693 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:07:26.693 -08 000000054 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:07:26.693 -08 000000054 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:26.743 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:07:26.743 -08 000000054 INF: ======================================
17-02-28 20:07:26.745 -08 000000094 INF: ===================Move X,Y===================
17-02-28 20:07:26.746 -08 000000094 INF: ======================================
17-02-28 20:07:26.747 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:26.747 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:26.748 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:07:26.748 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:07:26.803 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:07:26.803 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:07:26.866 -08 000000044 INF: FPGA: Recv ZFREQCL
17-02-28 20:07:26.866 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:07:26.866 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:26.867 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:07:26.927 -08 000000076 INF: FPGA: Recv TDIYERD 6454862
17-02-28 20:07:26.927 -08 000000042 INF: Before scan, Y encoder from FPGA = 6454862 counts (64.549 mm)
17-02-28 20:07:26.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:26.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:26.929 -08 000000032 INF: ===================TDI FPGA Arm===================
17-02-28 20:07:26.929 -08 000000066 INF: ===================Set YMotor gains for scans===================
17-02-28 20:07:26.929 -08 000000066 INF: ======================================
17-02-28 20:07:26.929 -08 000000032 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:07:26.930 -08 000000032 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:07:26.930 -08 000000032 INF: FPGA: Xmit TDIYPOS 6343935\n
17-02-28 20:07:26.988 -08 000000065 INF: FPGA: Recv TDIYPOS
17-02-28 20:07:26.988 -08 000000032 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:07:26.990 -08 000000032 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:07:26.990 -08 000000032 INF: FPGA: Xmit TDIYARM3 139264 6434860 1 1\n
17-02-28 20:07:27.052 -08 000000081 INF: FPGA: Recv TDIYARM3
17-02-28 20:07:27.052 -08 000000032 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:07:27.053 -08 000000032 INF: ===================TDI FPGA Arm===================
17-02-28 20:07:27.054 -08 000000032 INF: ======================================
17-02-28 20:07:27.055 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:27.056 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:27.056 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:27.057 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:27.057 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:27.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:07:27.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:07:27.058 -08 000000058 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:07:27.058 -08 000000076 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:07:27.058 -08 000000058 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:07:27.058 -08 000000058 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:07:27.058 -08 000000076 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:07:27.058 -08 000000076 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:07:27.058 -08 000000076 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:07:27.058 -08 000000058 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:07:27.058 -08 000000076 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:07:27.061 -08 000000058 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:07:27.425 -08 000000094 INF: FPGA: Recv EX1MV
17-02-28 20:07:27.425 -08 000000094 INF: FPGA: Recv EX2MV
17-02-28 20:07:27.425 -08 000000058 INF: Excitation Filter 2: Moved -107 steps in 366.7721 ms
17-02-28 20:07:27.425 -08 000000058 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.9824 ms
17-02-28 20:07:27.425 -08 000000058 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.0557 ms
17-02-28 20:07:27.425 -08 000000076 INF: Excitation Filter 1: Moved -107 steps in 366.7755 ms
17-02-28 20:07:27.425 -08 000000076 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.1797 ms
17-02-28 20:07:27.425 -08 000000076 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.2587 ms
17-02-28 20:07:27.426 -08 000000058 INF: ======================================
17-02-28 20:07:27.426 -08 000000076 INF: ======================================
17-02-28 20:07:27.427 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:27.428 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:27.429 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:07:27.429 -08 000000101 INF: ===================FPGA Z Wait===================
17-02-28 20:07:27.429 -08 000000034 INF: ===================Move Y Motor without settling===================
17-02-28 20:07:27.429 -08 000000052 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:27.429 -08 000000034 INF: Y Motor: Moving to 14.9003 mm @6.500 mm/sec, started at 64.5486 mm
17-02-28 20:07:27.429 -08 000000034 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:07:27.429 -08 000000034 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:27.429 -08 000000030 INF: ===================Camera TDI, Parallel===================
17-02-28 20:07:27.430 -08 000000052 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:07:27.430 -08 000000101 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:07:27.430 -08 000000065 INF: ===================Camera TDI===================
17-02-28 20:07:27.430 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:07:27.431 -08 000000052 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:07:27.432 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:27.432 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:27.433 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:27.433 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:27.492 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:07:27.492 -08 000000034 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:07:27.492 -08 000000034 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:27.554 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:07:27.554 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:27.582 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:27.582 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:27.583 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:27.583 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:27.614 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:07:27.614 -08 000000034 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:27.614 -08 000000034 INF: Y Motor: Set target position to 990027 encoder counts
17-02-28 20:07:27.614 -08 000000034 INF: Y Motor: Xmit s r0xca 990027\r
17-02-28 20:07:27.680 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:07:27.680 -08 000000034 INF: Y Motor: Start the move command
17-02-28 20:07:27.680 -08 000000034 INF: Y Motor: Xmit t 1\r
17-02-28 20:07:27.732 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:27.732 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:27.733 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:27.733 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:27.739 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:07:27.739 -08 000000034 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:07:27.739 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:27.800 -08 000000076 INF: FPGA: Recv ZWAIT 
17-02-28 20:07:27.800 -08 000000101 INF: ======================================
17-02-28 20:07:27.866 -08 000000034 INF: Y Motor: Unshifted Position: 5894311
17-02-28 20:07:27.882 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:07:27.882 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:07:27.882 -08 000000065 INF: ===================Camera #0 Frame #4===================
17-02-28 20:07:27.883 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:07:27.883 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:07:27.883 -08 000000077 INF: ===================Camera #2 Frame #4===================
17-02-28 20:07:27.916 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:28.041 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:28.044 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:07:28.044 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:07:28.044 -08 000000065 INF: ===================Camera #0 Frame #10===================
17-02-28 20:07:28.046 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:07:28.046 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:07:28.046 -08 000000077 INF: ===================Camera #2 Frame #10===================
17-02-28 20:07:28.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:07:28.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:07:28.179 -08 000000034 INF: Y Motor: Unshifted Position: 5690643
17-02-28 20:07:28.212 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:07:28.212 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:07:28.212 -08 000000065 INF: ===================Camera #0 Frame #17===================
17-02-28 20:07:28.215 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:07:28.215 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:07:28.215 -08 000000077 INF: ===================Camera #2 Frame #17===================
17-02-28 20:07:28.229 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:28.353 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:28.384 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:07:28.384 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:07:28.384 -08 000000065 INF: ===================Camera #0 Frame #23===================
17-02-28 20:07:28.387 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:07:28.387 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:07:28.387 -08 000000077 INF: ===================Camera #2 Frame #23===================
17-02-28 20:07:28.490 -08 000000034 INF: Y Motor: Unshifted Position: 5487199
17-02-28 20:07:28.540 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:28.552 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:07:28.552 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:07:28.552 -08 000000065 INF: ===================Camera #0 Frame #29===================
17-02-28 20:07:28.556 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:07:28.556 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:07:28.556 -08 000000077 INF: ===================Camera #2 Frame #29===================
17-02-28 20:07:28.665 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:28.720 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:07:28.720 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:07:28.720 -08 000000065 INF: ===================Camera #0 Frame #35===================
17-02-28 20:07:28.725 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:07:28.725 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:07:28.725 -08 000000077 INF: ===================Camera #2 Frame #35===================
17-02-28 20:07:28.801 -08 000000034 INF: Y Motor: Unshifted Position: 5285478
17-02-28 20:07:28.851 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:28.888 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41.
17-02-28 20:07:28.888 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41
17-02-28 20:07:28.888 -08 000000065 INF: ===================Camera #0 Frame #41===================
17-02-28 20:07:28.894 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:07:28.894 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:07:28.894 -08 000000077 INF: ===================Camera #2 Frame #42===================
17-02-28 20:07:28.976 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:29.056 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:07:29.056 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:07:29.056 -08 000000065 INF: ===================Camera #0 Frame #48===================
17-02-28 20:07:29.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:07:29.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:07:29.066 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:07:29.066 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:07:29.066 -08 000000077 INF: ===================Camera #2 Frame #48===================
17-02-28 20:07:29.113 -08 000000034 INF: Y Motor: Unshifted Position: 5082666
17-02-28 20:07:29.163 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:29.228 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:07:29.228 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:07:29.228 -08 000000065 INF: ===================Camera #0 Frame #54===================
17-02-28 20:07:29.235 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:07:29.235 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:07:29.235 -08 000000077 INF: ===================Camera #2 Frame #54===================
17-02-28 20:07:29.288 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:29.396 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:07:29.396 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:07:29.396 -08 000000065 INF: ===================Camera #0 Frame #60===================
17-02-28 20:07:29.404 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:07:29.404 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:07:29.404 -08 000000077 INF: ===================Camera #2 Frame #60===================
17-02-28 20:07:29.425 -08 000000034 INF: Y Motor: Unshifted Position: 4880311
17-02-28 20:07:29.475 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:29.564 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-02-28 20:07:29.564 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-02-28 20:07:29.564 -08 000000065 INF: ===================Camera #0 Frame #66===================
17-02-28 20:07:29.573 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:07:29.573 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:07:29.573 -08 000000077 INF: ===================Camera #2 Frame #67===================
17-02-28 20:07:29.600 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:29.733 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:07:29.733 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:07:29.733 -08 000000065 INF: ===================Camera #0 Frame #73===================
17-02-28 20:07:29.737 -08 000000034 INF: Y Motor: Unshifted Position: 4677505
17-02-28 20:07:29.746 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:07:29.746 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:07:29.746 -08 000000077 INF: ===================Camera #2 Frame #73===================
17-02-28 20:07:29.787 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:29.905 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:07:29.905 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:07:29.905 -08 000000065 INF: ===================Camera #0 Frame #79===================
17-02-28 20:07:29.914 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:29.916 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:07:29.916 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:07:29.916 -08 000000077 INF: ===================Camera #2 Frame #79===================
17-02-28 20:07:30.050 -08 000000034 INF: Y Motor: Unshifted Position: 4473832
17-02-28 20:07:30.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:07:30.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 0 of 5 seconds left===================
17-02-28 20:07:30.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:07:30.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:07:30.059 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:07:30.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:07:30.074 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:07:30.074 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:07:30.074 -08 000000065 INF: ===================Camera #0 Frame #85===================
17-02-28 20:07:30.086 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:07:30.086 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:07:30.086 -08 000000077 INF: ===================Camera #2 Frame #86===================
17-02-28 20:07:30.100 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:30.157 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:07:30.225 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:30.235 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11520 (0x03)\r\n(0xFF)
17-02-28 20:07:30.235 -08 000000018 INF: Current Position of Pump is: 11520
17-02-28 20:07:30.243 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-02-28 20:07:30.243 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-02-28 20:07:30.243 -08 000000065 INF: ===================Camera #0 Frame #91===================
17-02-28 20:07:30.259 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:07:30.259 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:07:30.259 -08 000000077 INF: ===================Camera #2 Frame #92===================
17-02-28 20:07:30.335 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:07:30.362 -08 000000034 INF: Y Motor: Unshifted Position: 4271033
17-02-28 20:07:30.412 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:30.412 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:07:30.412 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:07:30.412 -08 000000065 INF: ===================Camera #0 Frame #98===================
17-02-28 20:07:30.422 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11520 (0x03)\r\n(0xFF)
17-02-28 20:07:30.422 -08 000000018 INF: Current Position of Pump is: 11520
17-02-28 20:07:30.422 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:07:30.429 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:07:30.429 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:07:30.429 -08 000000077 INF: ===================Camera #2 Frame #98===================
17-02-28 20:07:30.522 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD11520R\r
17-02-28 20:07:30.537 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:30.585 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:07:30.585 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:07:30.585 -08 000000065 INF: ===================Camera #0 Frame #104===================
17-02-28 20:07:30.599 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:07:30.599 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:07:30.599 -08 000000077 INF: ===================Camera #2 Frame #104===================
17-02-28 20:07:30.609 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:30.674 -08 000000034 INF: Y Motor: Unshifted Position: 4068011
17-02-28 20:07:30.709 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:30.724 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:30.754 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:07:30.754 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:07:30.754 -08 000000065 INF: ===================Camera #0 Frame #110===================
17-02-28 20:07:30.769 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:07:30.769 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:07:30.769 -08 000000077 INF: ===================Camera #2 Frame #111===================
17-02-28 20:07:30.798 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:30.849 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:30.923 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 115, frameCount = 116.
17-02-28 20:07:30.923 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 116
17-02-28 20:07:30.923 -08 000000065 INF: ===================Camera #0 Frame #116===================
17-02-28 20:07:30.943 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:07:30.943 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:07:30.943 -08 000000077 INF: ===================Camera #2 Frame #117===================
17-02-28 20:07:30.985 -08 000000034 INF: Y Motor: Unshifted Position: 3865863
17-02-28 20:07:31.035 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:31.048 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:31.093 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:07:31.093 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:07:31.093 -08 000000065 INF: ===================Camera #0 Frame #123===================
17-02-28 20:07:31.109 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:31.114 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:07:31.114 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:07:31.114 -08 000000077 INF: ===================Camera #2 Frame #123===================
17-02-28 20:07:31.160 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:31.266 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:07:31.266 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:07:31.266 -08 000000065 INF: ===================Camera #0 Frame #129===================
17-02-28 20:07:31.285 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:07:31.285 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:07:31.285 -08 000000077 INF: ===================Camera #2 Frame #130===================
17-02-28 20:07:31.297 -08 000000034 INF: Y Motor: Unshifted Position: 3662842
17-02-28 20:07:31.347 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:31.359 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:31.421 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:31.436 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:07:31.436 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:07:31.436 -08 000000065 INF: ===================Camera #0 Frame #135===================
17-02-28 20:07:31.458 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:07:31.458 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:07:31.458 -08 000000077 INF: ===================Camera #2 Frame #136===================
17-02-28 20:07:31.472 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:31.606 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:07:31.606 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:07:31.606 -08 000000065 INF: ===================Camera #0 Frame #142===================
17-02-28 20:07:31.609 -08 000000034 INF: Y Motor: Unshifted Position: 3460047
17-02-28 20:07:31.629 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:07:31.629 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:07:31.629 -08 000000077 INF: ===================Camera #2 Frame #142===================
17-02-28 20:07:31.659 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:31.671 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:31.733 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:31.779 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:07:31.779 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:07:31.779 -08 000000065 INF: ===================Camera #0 Frame #148===================
17-02-28 20:07:31.784 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:31.800 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:07:31.800 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:07:31.800 -08 000000077 INF: ===================Camera #2 Frame #149===================
17-02-28 20:07:31.921 -08 000000034 INF: Y Motor: Unshifted Position: 3257033
17-02-28 20:07:31.949 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:07:31.949 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:07:31.949 -08 000000065 INF: ===================Camera #0 Frame #154===================
17-02-28 20:07:31.971 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:31.974 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:07:31.974 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:07:31.974 -08 000000077 INF: ===================Camera #2 Frame #155===================
17-02-28 20:07:31.983 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:32.045 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:32.096 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:32.119 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:07:32.119 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:07:32.119 -08 000000065 INF: ===================Camera #0 Frame #160===================
17-02-28 20:07:32.145 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:07:32.145 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:07:32.145 -08 000000077 INF: ===================Camera #2 Frame #161===================
17-02-28 20:07:32.234 -08 000000034 INF: Y Motor: Unshifted Position: 3054237
17-02-28 20:07:32.284 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:32.289 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:07:32.289 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:07:32.289 -08 000000065 INF: ===================Camera #0 Frame #167===================
17-02-28 20:07:32.295 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:32.316 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:07:32.316 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:07:32.316 -08 000000077 INF: ===================Camera #2 Frame #168===================
17-02-28 20:07:32.357 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:07:32.357 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:07:32.357 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:07:32.408 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:32.462 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:07:32.462 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:07:32.462 -08 000000065 INF: ===================Camera #0 Frame #173===================
17-02-28 20:07:32.490 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:07:32.490 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:07:32.490 -08 000000077 INF: ===================Camera #2 Frame #174===================
17-02-28 20:07:32.545 -08 000000034 INF: Y Motor: Unshifted Position: 2851224
17-02-28 20:07:32.595 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:32.632 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:07:32.632 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:07:32.632 -08 000000065 INF: ===================Camera #0 Frame #179===================
17-02-28 20:07:32.661 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:07:32.661 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:07:32.661 -08 000000077 INF: ===================Camera #2 Frame #180===================
17-02-28 20:07:32.720 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:32.802 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:07:32.802 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:07:32.802 -08 000000065 INF: ===================Camera #0 Frame #186===================
17-02-28 20:07:32.832 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:07:32.832 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:07:32.832 -08 000000077 INF: ===================Camera #2 Frame #187===================
17-02-28 20:07:32.858 -08 000000034 INF: Y Motor: Unshifted Position: 2648422
17-02-28 20:07:32.908 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:32.975 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:07:32.975 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:07:32.975 -08 000000065 INF: ===================Camera #0 Frame #192===================
17-02-28 20:07:33.006 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:07:33.006 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:07:33.006 -08 000000077 INF: ===================Camera #2 Frame #193===================
17-02-28 20:07:33.031 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:33.145 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:07:33.145 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:07:33.145 -08 000000065 INF: ===================Camera #0 Frame #198===================
17-02-28 20:07:33.168 -08 000000034 INF: Y Motor: Unshifted Position: 2444112
17-02-28 20:07:33.177 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:07:33.177 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:07:33.177 -08 000000077 INF: ===================Camera #2 Frame #199===================
17-02-28 20:07:33.218 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:33.315 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-02-28 20:07:33.315 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-02-28 20:07:33.315 -08 000000065 INF: ===================Camera #0 Frame #204===================
17-02-28 20:07:33.343 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:33.348 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:07:33.348 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:07:33.348 -08 000000077 INF: ===================Camera #2 Frame #206===================
17-02-28 20:07:33.457 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:07:33.480 -08 000000034 INF: Y Motor: Unshifted Position: 2241311
17-02-28 20:07:33.483 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:07:33.483 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:07:33.483 -08 000000065 INF: ===================Camera #0 Frame #211===================
17-02-28 20:07:33.522 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:07:33.522 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:07:33.522 -08 000000077 INF: ===================Camera #2 Frame #212===================
17-02-28 20:07:33.530 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:33.543 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:33.643 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:33.655 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:33.657 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:07:33.657 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:07:33.657 -08 000000065 INF: ===================Camera #0 Frame #217===================
17-02-28 20:07:33.693 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:07:33.693 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:07:33.693 -08 000000077 INF: ===================Camera #2 Frame #218===================
17-02-28 20:07:33.730 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:07:33.792 -08 000000034 INF: Y Motor: Unshifted Position: 2038298
17-02-28 20:07:33.827 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:07:33.827 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:07:33.827 -08 000000065 INF: ===================Camera #0 Frame #223===================
17-02-28 20:07:33.842 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:33.864 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:07:33.864 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:07:33.864 -08 000000077 INF: ===================Camera #2 Frame #225===================
17-02-28 20:07:33.966 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:33.980 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:07:33.997 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:07:33.997 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:07:33.997 -08 000000065 INF: ===================Camera #0 Frame #230===================
17-02-28 20:07:34.038 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:07:34.038 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:07:34.038 -08 000000077 INF: ===================Camera #2 Frame #231===================
17-02-28 20:07:34.041 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:07:34.041 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:34.041 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:07:34.106 -08 000000034 INF: Y Motor: Unshifted Position: 1836144
17-02-28 20:07:34.156 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:34.170 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:07:34.170 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:07:34.170 -08 000000065 INF: ===================Camera #0 Frame #236===================
17-02-28 20:07:34.208 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:07:34.208 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:07:34.208 -08 000000077 INF: ===================Camera #2 Frame #237===================
17-02-28 20:07:34.279 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:34.340 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:07:34.340 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:07:34.340 -08 000000065 INF: ===================Camera #0 Frame #242===================
17-02-28 20:07:34.378 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:07:34.378 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:07:34.378 -08 000000077 INF: ===================Camera #2 Frame #244===================
17-02-28 20:07:34.418 -08 000000034 INF: Y Motor: Unshifted Position: 1633122
17-02-28 20:07:34.429 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:34.429 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:34.430 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:07:34.430 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:07:34.431 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3===================
17-02-28 20:07:34.431 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:07:34.445 -08 000000018 INF: Call to RTA to retrieve registration transforms took 13 ms.
17-02-28 20:07:34.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:07:34.468 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:34.510 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:07:34.510 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:07:34.510 -08 000000065 INF: ===================Camera #0 Frame #248===================
17-02-28 20:07:34.552 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:07:34.552 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:07:34.552 -08 000000077 INF: ===================Camera #2 Frame #250===================
17-02-28 20:07:34.590 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:34.679 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:07:34.679 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:07:34.679 -08 000000065 INF: ===================Camera #0 Frame #255===================
17-02-28 20:07:34.723 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:07:34.723 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:07:34.723 -08 000000077 INF: ===================Camera #2 Frame #256===================
17-02-28 20:07:34.731 -08 000000034 INF: Y Motor: Unshifted Position: 1430322
17-02-28 20:07:34.781 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:34.850 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:07:34.850 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:07:34.850 -08 000000065 INF: ===================Camera #0 Frame #261===================
17-02-28 20:07:34.893 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:07:34.893 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:07:34.893 -08 000000077 INF: ===================Camera #2 Frame #263===================
17-02-28 20:07:34.902 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:35.020 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:07:35.020 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:07:35.020 -08 000000065 INF: ===================Camera #0 Frame #267===================
17-02-28 20:07:35.040 -08 000000034 INF: Y Motor: Unshifted Position: 1226638
17-02-28 20:07:35.067 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:07:35.067 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:07:35.067 -08 000000077 INF: ===================Camera #2 Frame #269===================
17-02-28 20:07:35.090 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:35.163 -08 000000097 INF: FPGA: Recv TDIYWAIT
17-02-28 20:07:35.163 -08 000000052 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:35.165 -08 000000052 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:07:35.166 -08 000000074 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:07:35.166 -08 000000094 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:07:35.166 -08 000000074 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:07:35.166 -08 000000074 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:07:35.166 -08 000000074 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:07:35.166 -08 000000094 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:07:35.166 -08 000000074 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:07:35.166 -08 000000094 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:07:35.166 -08 000000094 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:07:35.167 -08 000000094 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:07:35.190 -08 000000065 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:07:35.190 -08 000000065 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:07:35.190 -08 000000065 INF: ===================Camera #0 Frame #272===================
17-02-28 20:07:35.206 -08 000000065 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:07:35.207 -08 000000065 INF: ===================CameraTDI Cleanup===================
17-02-28 20:07:35.215 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:35.338 -08 000000065 INF: Camera #0 ReleaseBuffer
17-02-28 20:07:35.338 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:07:35.338 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:07:35.338 -08 000000077 INF: ===================Camera #2 Frame #272===================
17-02-28 20:07:35.338 -08 000000065 INF: ===================Camera TDI===================
17-02-28 20:07:35.347 -08 000000077 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:07:35.348 -08 000000077 INF: ===================CameraTDI Cleanup===================
17-02-28 20:07:35.352 -08 000000034 INF: Y Motor: Unshifted Position: 1023849
17-02-28 20:07:35.368 -08 000000065 INF: ======================================
17-02-28 20:07:35.402 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:35.515 -08 000000077 INF: Camera #2 ReleaseBuffer
17-02-28 20:07:35.515 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:07:35.539 -08 000000065 INF: FPGA: Recv EX1MV
17-02-28 20:07:35.539 -08 000000065 INF: FPGA: Recv EX2MV
17-02-28 20:07:35.539 -08 000000074 INF: Excitation Filter 1: Moved 107 steps in 372.7905 ms
17-02-28 20:07:35.539 -08 000000094 INF: Excitation Filter 2: Moved 107 steps in 372.6783 ms
17-02-28 20:07:35.539 -08 000000074 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.8992 ms
17-02-28 20:07:35.539 -08 000000074 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.0083 ms
17-02-28 20:07:35.539 -08 000000094 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.8491 ms
17-02-28 20:07:35.539 -08 000000094 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.019 ms
17-02-28 20:07:35.539 -08 000000074 INF: ======================================
17-02-28 20:07:35.539 -08 000000094 INF: ======================================
17-02-28 20:07:35.541 -08 000000052 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:35.542 -08 000000034 INF: Y Motor: Unshifted Position: 990025
17-02-28 20:07:35.542 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:07:35.542 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:35.542 -08 000000052 INF: ======================================
17-02-28 20:07:35.549 -08 000000077 INF: ======================================
17-02-28 20:07:35.550 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:07:35.551 -08 000000030 INF: ======================================
17-02-28 20:07:35.603 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:07:35.603 -08 000000034 INF: Y Motor: Moved to 14.9003 after 7864 ms
17-02-28 20:07:35.603 -08 000000034 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:07:35.664 -08 000000034 INF: Y Motor: Recv v 4097\r
17-02-28 20:07:35.664 -08 000000034 INF: Y Motor: Status After move finished OK:
17-02-28 20:07:35.664 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:35.728 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:07:35.728 -08 000000034 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:35.728 -08 000000034 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:07:35.789 -08 000000034 INF: Y Motor: Recv v 134217728\r
17-02-28 20:07:35.789 -08 000000034 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:07:35.789 -08 000000034 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:07:35.789 -08 000000034 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:07:35.853 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:07:35.853 -08 000000034 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:07:35.853 -08 000000034 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:07:35.853 -08 000000034 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:35.913 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:07:35.913 -08 000000034 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:07:35.913 -08 000000034 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:35.977 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:07:35.977 -08 000000034 INF: ======================================
17-02-28 20:07:35.978 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:35.979 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:07:35.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:35.980 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:07:36.036 -08 000000065 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:07:36.036 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:07:36.100 -08 000000086 INF: FPGA: Recv TDIYERD 1490029
17-02-28 20:07:36.100 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:07:36.161 -08 000000036 INF: FPGA: Recv ZADCR 34895
17-02-28 20:07:36.161 -08 000000042 INF: At scan end Y pos = 14.900 and Z pos = -0.133. Y moved -48.539 mm
17-02-28 20:07:36.161 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:07:36.224 -08 000000063 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:07:36.224 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:07:36.224 -08 000000042 INF: TDIScan finished after 12681.9762 ms
17-02-28 20:07:36.224 -08 000000042 INF: Image[0]: Y should trigger at 63.439 mm, 2nd row was at 64.348 mm (error = 0.909 mm)
17-02-28 20:07:36.224 -08 000000042 INF: Image[2]: Y should trigger at 63.439 mm, 2nd row was at 64.348 mm (error = 0.909 mm)
17-02-28 20:07:36.226 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:36.259 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.799 um
17-02-28 20:07:36.259 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:36.260 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:07:36.288 -08 000000086 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:07:36.288 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:36.289 -08 000000077 INF: ===================Dither Clean Up Command===================
17-02-28 20:07:36.289 -08 000000094 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:07:36.289 -08 000000076 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:07:36.289 -08 000000051 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:07:36.289 -08 000000076 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:07:36.289 -08 000000076 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:07:36.289 -08 000000051 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:07:36.289 -08 000000051 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:07:36.290 -08 000000094 INF: ======================================
17-02-28 20:07:36.290 -08 000000044 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:07:36.290 -08 000000034 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:07:36.290 -08 000000044 INF: ======================================
17-02-28 20:07:36.291 -08 000000034 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:07:36.349 -08 000000078 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:36.349 -08 000000078 INF: FPGA: Recv ZSEL 
17-02-28 20:07:36.349 -08 000000034 INF: FPGA: Xmit ZDACW 41974\n
17-02-28 20:07:36.349 -08 000000051 INF: ======================================
17-02-28 20:07:36.351 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:07:36.351 -08 000000076 INF: ======================================
17-02-28 20:07:36.413 -08 000000032 INF: FPGA: Recv ZDACW 
17-02-28 20:07:36.413 -08 000000034 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:07:36.413 -08 000000034 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:07:36.474 -08 000000089 INF: FPGA: Recv TDIBB
17-02-28 20:07:36.474 -08 000000034 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:07:36.475 -08 000000034 INF: ======================================
17-02-28 20:07:36.476 -08 000000077 INF: ======================================
17-02-28 20:07:36.477 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:36.478 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:07:36.478 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:36.478 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:07:36.478 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:36.478 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:07:36.479 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:36.479 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:07:36.479 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:07:36.479 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308===================
17-02-28 20:07:36.479 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308===================
17-02-28 20:07:36.480 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:07:36.480 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:07:36.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:07:36.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308===================
17-02-28 20:07:36.503 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:07:36.503 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:36.503 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:36.503 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:07:36.503 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:36.504 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 8===================
17-02-28 20:07:36.504 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface===================
17-02-28 20:07:36.504 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging===================
17-02-28 20:07:36.505 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface===================
17-02-28 20:07:36.505 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface===================
17-02-28 20:07:36.505 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:07:36.505 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:07:36.598 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1203 Request: {"Cycle":2,"Lane":8,"Tile":1203,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF224","HCSMMF255","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.710 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1207 Request: {"Cycle":2,"Lane":8,"Tile":1207,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF236","HCSMMF189","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.719 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1202 Request: {"Cycle":2,"Lane":8,"Tile":1202,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF284","HCSMMF259","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.726 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1201 Request: {"Cycle":2,"Lane":8,"Tile":1201,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF205","HCSMMF272","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.729 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1209 Request: {"Cycle":2,"Lane":8,"Tile":1209,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF257","HCSMMF179","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.730 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1204 Request: {"Cycle":2,"Lane":8,"Tile":1204,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF281","HCSMMF202","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.732 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1213 Request: {"Cycle":2,"Lane":8,"Tile":1213,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF250","HCSMMF279","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.733 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1214 Request: {"Cycle":2,"Lane":8,"Tile":1214,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF243","HCSMMF212","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.733 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1208 Request: {"Cycle":2,"Lane":8,"Tile":1208,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF286","HCSMMF182","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.734 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1206 Request: {"Cycle":2,"Lane":8,"Tile":1206,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF251","HCSMMF285","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.735 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1219 Request: {"Cycle":2,"Lane":8,"Tile":1219,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF199","HCSMMF282","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.736 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1210 Request: {"Cycle":2,"Lane":8,"Tile":1210,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF211","HCSMMF204","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.737 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1205 Request: {"Cycle":2,"Lane":8,"Tile":1205,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF241","HCSMMF276","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.737 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1223 Request: {"Cycle":2,"Lane":8,"Tile":1223,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF216","HCSMMF221","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.738 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1218 Request: {"Cycle":2,"Lane":8,"Tile":1218,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF274","HCSMMF256","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.739 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1211 Request: {"Cycle":2,"Lane":8,"Tile":1211,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF210","HCSMMF186","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.739 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1222 Request: {"Cycle":2,"Lane":8,"Tile":1222,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF219","HCSMMF280","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.740 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1215 Request: {"Cycle":2,"Lane":8,"Tile":1215,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF206","HCSMMF261","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.741 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1226 Request: {"Cycle":2,"Lane":8,"Tile":1226,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF231","HCSMMF268","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.742 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1227 Request: {"Cycle":2,"Lane":8,"Tile":1227,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF213","HCSMMF208","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.743 -08 000000004 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1221 Request: {"Cycle":2,"Lane":8,"Tile":1221,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF217","HCSMMF178","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.743 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1220 Request: {"Cycle":2,"Lane":8,"Tile":1220,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF267","HCSMMF232","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.744 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1212 Request: {"Cycle":2,"Lane":8,"Tile":1212,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF225","HCSMMF188","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.746 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1224 Request: {"Cycle":2,"Lane":8,"Tile":1224,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF194","HCSMMF239","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.747 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1217 Request: {"Cycle":2,"Lane":8,"Tile":1217,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF198","HCSMMF242","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.748 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1216 Request: {"Cycle":2,"Lane":8,"Tile":1216,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF185","HCSMMF184","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.749 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1225 Request: {"Cycle":2,"Lane":8,"Tile":1225,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF222","HCSMMF187","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.750 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 1228 Request: {"Cycle":2,"Lane":8,"Tile":1228,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF230","HCSMMF238","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:36.752 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:36.758 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:07:36.850 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:36.850 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:07:36.887 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:36.893 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:07:36.929 -08 000000100 INF: FPGA: Recv MIOCOMPR
17-02-28 20:07:36.929 -08 000000042 INF: Compensator: Moved OutOfPath in 424 ms
17-02-28 20:07:36.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface===================
17-02-28 20:07:36.944 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:36.945 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:36.945 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:07:36.945 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:07:36.976 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:36.982 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:07:36.994 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:07:36.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:36.994 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:07:36.995 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:36.995 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:36.996 -08 000000055 INF: ===================Move Tilt Motor 1===================
17-02-28 20:07:36.996 -08 000000062 INF: ===================Move Tilt Motor 3===================
17-02-28 20:07:36.996 -08 000000055 INF: Tilt Motor 1: Moving to 5.0228 mm, started at 4.9426 mm, delta = 0.0802 mm
17-02-28 20:07:36.996 -08 000000055 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:36.996 -08 000000062 INF: Tilt Motor 3: Moving to 5.3020 mm, started at 5.5052 mm, delta = -0.2032 mm
17-02-28 20:07:36.996 -08 000000088 INF: ===================Move Tilt Motor 2===================
17-02-28 20:07:36.997 -08 000000088 INF: Tilt Motor 2: Moving to 5.3551 mm, started at 5.5598 mm, delta = -0.2047 mm
17-02-28 20:07:37.000 -08 000000088 INF: FPGA: Xmit T2RD\n
17-02-28 20:07:37.002 -08 000000062 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:37.090 -08 000000036 INF: FPGA: Recv T1RD 19457
17-02-28 20:07:37.090 -08 000000036 INF: FPGA: Recv T2RD 21889
17-02-28 20:07:37.090 -08 000000036 INF: FPGA: Recv T3RD 21673
17-02-28 20:07:37.090 -08 000000062 INF: Tilt Motor 3: Encoder: at motor step 3612 + 1/6
17-02-28 20:07:37.090 -08 000000062 INF: Tilt Motor 3: Moving to 20874 encoder counts
17-02-28 20:07:37.090 -08 000000088 INF: Tilt Motor 2: Encoder: at motor step 3648 + 1/6
17-02-28 20:07:37.090 -08 000000088 INF: Tilt Motor 2: Moving to 21083 encoder counts
17-02-28 20:07:37.090 -08 000000062 INF: FPGA: Xmit T3MOVETO 20874\n
17-02-28 20:07:37.091 -08 000000055 INF: Tilt Motor 1: Encoder: at motor step 3242 + 5/6
17-02-28 20:07:37.091 -08 000000055 INF: Tilt Motor 1: Moving to 19775 encoder counts
17-02-28 20:07:37.092 -08 000000055 INF: FPGA: Xmit T1MOVETO 19775\n
17-02-28 20:07:37.093 -08 000000088 INF: FPGA: Xmit T2MOVETO 21083\n
17-02-28 20:07:37.164 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:37.170 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:07:37.261 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:37.270 -08 000000023 INF: FPGA: Recv T1MOVETO 52
17-02-28 20:07:37.270 -08 000000055 INF: Tilt Motor 1: To move from 4.942 to 5.023 (0.080 mm) should take 53 steps, but required 52 steps (0.079 mm). Slippage = -0.002 mm (-0.02%)
17-02-28 20:07:37.270 -08 000000055 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:37.332 -08 000000076 INF: FPGA: Recv T1RD 19770
17-02-28 20:07:37.332 -08 000000055 INF: Tilt Motor 1: Encoder: at motor step 3295 + 0/6
17-02-28 20:07:37.332 -08 000000055 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:37.394 -08 000000036 INF: FPGA: Recv T1RD 19770
17-02-28 20:07:37.394 -08 000000036 INF: FPGA: Recv T3MOVETO 133
17-02-28 20:07:37.394 -08 000000036 INF: FPGA: Recv T2MOVETO 134
17-02-28 20:07:37.394 -08 000000055 INF: Tilt Motor 1: Encoder: at motor step 3295 + 0/6
17-02-28 20:07:37.394 -08 000000062 INF: Tilt Motor 3: To move from 5.505 to 5.302 (-0.203 mm) should take 133 steps, but required 133 steps (0.203 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:07:37.394 -08 000000055 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:37.394 -08 000000088 INF: Tilt Motor 2: To move from 5.560 to 5.355 (-0.205 mm) should take 134 steps, but required 134 steps (0.204 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:07:37.397 -08 000000062 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:37.398 -08 000000088 INF: FPGA: Xmit T2RD\n
17-02-28 20:07:37.456 -08 000000083 INF: FPGA: Recv T1RD 19770
17-02-28 20:07:37.456 -08 000000083 INF: FPGA: Recv T3RD 20878
17-02-28 20:07:37.456 -08 000000083 INF: FPGA: Recv T2RD 21086
17-02-28 20:07:37.456 -08 000000055 INF: Tilt Motor 1: Encoder: at motor step 3295 + 0/6
17-02-28 20:07:37.456 -08 000000088 INF: Tilt Motor 2: Encoder: at motor step 3514 + 2/6
17-02-28 20:07:37.456 -08 000000055 INF: Tilt Motor 1: After move to 5.0228, error = -0.0012, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:37.456 -08 000000088 INF: FPGA: Xmit T2RD\n
17-02-28 20:07:37.456 -08 000000062 INF: Tilt Motor 3: Encoder: at motor step 3479 + 4/6
17-02-28 20:07:37.456 -08 000000055 INF: Tilt Motor 1: Moved to 5.0216 after 459.9946 ms
17-02-28 20:07:37.457 -08 000000062 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:37.457 -08 000000055 INF: ======================================
17-02-28 20:07:37.522 -08 000000066 INF: FPGA: Recv T2RD 21086
17-02-28 20:07:37.522 -08 000000066 INF: FPGA: Recv T3RD 20878
17-02-28 20:07:37.522 -08 000000088 INF: Tilt Motor 2: Encoder: at motor step 3514 + 2/6
17-02-28 20:07:37.522 -08 000000088 INF: FPGA: Xmit T2RD\n
17-02-28 20:07:37.523 -08 000000062 INF: Tilt Motor 3: Encoder: at motor step 3479 + 4/6
17-02-28 20:07:37.524 -08 000000062 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:37.560 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:07:37.581 -08 000000077 INF: FPGA: Recv T2RD 21086
17-02-28 20:07:37.581 -08 000000077 INF: FPGA: Recv T3RD 20878
17-02-28 20:07:37.581 -08 000000088 INF: Tilt Motor 2: Encoder: at motor step 3514 + 2/6
17-02-28 20:07:37.581 -08 000000062 INF: Tilt Motor 3: Encoder: at motor step 3479 + 4/6
17-02-28 20:07:37.581 -08 000000062 INF: Tilt Motor 3: After move to 5.3020, error = 0.0010, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:37.581 -08 000000088 INF: Tilt Motor 2: After move to 5.3551, error = 0.0007, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:37.581 -08 000000088 INF: Tilt Motor 2: Moved to 5.3558 after 584.8654 ms
17-02-28 20:07:37.581 -08 000000062 INF: Tilt Motor 3: Moved to 5.3030 after 585.1467 ms
17-02-28 20:07:37.582 -08 000000088 INF: ======================================
17-02-28 20:07:37.582 -08 000000062 INF: ======================================
17-02-28 20:07:37.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:37.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:37.584 -08 000000042 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.02278966876241, m2=5.35509691590693, m3=5.30201091590694
17-02-28 20:07:37.590 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm.
17-02-28 20:07:37.599 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:07:37.599 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:07:37.599 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:07:37.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:07:37.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:07:37.603 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:07:37.603 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:07:37.603 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:07:37.647 -08 000000055 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:37.647 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:07:37.648 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:07:37.648 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1601 mm
17-02-28 20:07:37.648 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:07:37.708 -08 000000047 INF: FPGA: Recv ZTRG 
17-02-28 20:07:37.708 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:07:37.770 -08 000000094 INF: FPGA: Recv ZYT 
17-02-28 20:07:37.770 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:07:37.770 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:07:37.832 -08 000000025 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:07:37.832 -08 000000025 INF: FPGA: Recv ZMV 
17-02-28 20:07:37.832 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:07:37.832 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.8606 ms
17-02-28 20:07:37.832 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:07:37.894 -08 000000032 INF: FPGA: Recv ZDACR 60292
17-02-28 20:07:37.894 -08 000000042 INF: Z Motor: MoveAndTrigger took 246.4324 ms w/comms
17-02-28 20:07:37.894 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:37.894 -08 000000042 INF: Z Motor: MoveAbsStepped took 246.7745 ms
17-02-28 20:07:37.895 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:07:37.895 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm.
17-02-28 20:07:37.904 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:07:37.904 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:07:37.904 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:07:37.904 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:07:37.904 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:07:37.957 -08 000000070 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:37.967 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:07:37.968 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm.
17-02-28 20:07:37.976 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:07:37.976 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:07:37.976 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:07:37.979 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:37.979 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:07:37.979 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:37.979 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = A_1
17-02-28 20:07:37.979 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:37.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:37.981 -08 000000090 INF: ===================Move X,Y===================
17-02-28 20:07:37.981 -08 000000044 INF: ===================MoveEmissionFilters===================
17-02-28 20:07:37.982 -08 000000090 INF: ===================Move X,Y, Parallel===================
17-02-28 20:07:37.983 -08 000000040 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:07:37.983 -08 000000083 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:07:37.983 -08 000000072 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:07:37.983 -08 000000034 INF: ===================Move Y Motor without settling===================
17-02-28 20:07:37.983 -08 000000054 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:07:37.983 -08 000000025 INF: ===================Move X Motor without settling===================
17-02-28 20:07:37.983 -08 000000025 INF: X Motor: Xmit PR VM\n
17-02-28 20:07:37.984 -08 000000040 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:07:37.984 -08 000000072 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:07:37.984 -08 000000054 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:07:37.984 -08 000000083 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:07:37.985 -08 000000067 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:07:37.985 -08 000000067 INF: ======================================
17-02-28 20:07:37.985 -08 000000010 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:07:37.985 -08 000000064 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:07:37.985 -08 000000010 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:07:37.986 -08 000000069 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:07:37.986 -08 000000076 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:07:37.986 -08 000000080 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:07:37.986 -08 000000034 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9003 mm
17-02-28 20:07:37.986 -08 000000034 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:07:37.986 -08 000000034 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:37.986 -08 000000076 INF: ======================================
17-02-28 20:07:37.987 -08 000000010 INF: ======================================
17-02-28 20:07:37.987 -08 000000069 INF: ======================================
17-02-28 20:07:37.987 -08 000000062 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:07:37.987 -08 000000080 INF: ======================================
17-02-28 20:07:37.987 -08 000000062 INF: ======================================
17-02-28 20:07:37.988 -08 000000083 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:07:37.989 -08 000000040 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:07:37.989 -08 000000055 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:07:37.989 -08 000000064 INF: ======================================
17-02-28 20:07:37.989 -08 000000055 INF: ======================================
17-02-28 20:07:37.990 -08 000000083 INF: ======================================
17-02-28 20:07:37.990 -08 000000040 INF: ======================================
17-02-28 20:07:37.991 -08 000000054 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:07:37.991 -08 000000072 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:07:37.993 -08 000000054 INF: ======================================
17-02-28 20:07:37.993 -08 000000072 INF: ======================================
17-02-28 20:07:37.995 -08 000000044 INF: ======================================
17-02-28 20:07:38.021 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:07:38.021 -08 000000034 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:07:38.021 -08 000000034 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:38.021 -08 000000025 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:07:38.021 -08 000000025 INF: X Motor: Xmit PR VI\n
17-02-28 20:07:38.083 -08 000000025 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:07:38.083 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:07:38.083 -08 000000025 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:07:38.083 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:38.083 -08 000000025 INF: X Motor: Moving to 69.1856 mm @15.000 mm/sec, started at 89.0977 mm
17-02-28 20:07:38.083 -08 000000025 INF: X Motor: Xmit MA 4172\n
17-02-28 20:07:38.145 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:07:38.145 -08 000000034 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:38.145 -08 000000025 INF: X Motor: Recv MA 4172\r\n>
17-02-28 20:07:38.145 -08 000000034 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:07:38.145 -08 000000034 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:07:38.145 -08 000000025 INF: X Motor: WaitUntilStopped 61327
17-02-28 20:07:38.208 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:07:38.208 -08 000000034 INF: Y Motor: Start the move command
17-02-28 20:07:38.208 -08 000000034 INF: Y Motor: Xmit t 1\r
17-02-28 20:07:38.272 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:07:38.272 -08 000000034 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:07:38.272 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:38.396 -08 000000034 INF: Y Motor: Unshifted Position: 1085268
17-02-28 20:07:38.446 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:38.570 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:38.707 -08 000000034 INF: Y Motor: Unshifted Position: 1779219
17-02-28 20:07:38.757 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:38.881 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:39.018 -08 000000034 INF: Y Motor: Unshifted Position: 2557531
17-02-28 20:07:39.068 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:39.195 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:39.332 -08 000000034 INF: Y Motor: Unshifted Position: 3342491
17-02-28 20:07:39.382 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:39.506 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:39.643 -08 000000034 INF: Y Motor: Unshifted Position: 4120045
17-02-28 20:07:39.693 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:39.817 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:39.955 -08 000000034 INF: Y Motor: Unshifted Position: 4903341
17-02-28 20:07:40.005 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:40.017 -08 000000025 INF: X Motor: Xmit PR ER\n
17-02-28 20:07:40.079 -08 000000025 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:07:40.079 -08 000000025 INF: X Motor: Moved to 69.1855 after 1933 ms
17-02-28 20:07:40.079 -08 000000025 INF: ======================================
17-02-28 20:07:40.129 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:40.268 -08 000000034 INF: Y Motor: Unshifted Position: 5684004
17-02-28 20:07:40.318 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:40.442 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:40.580 -08 000000034 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:07:40.580 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:07:40.580 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:40.642 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:07:40.642 -08 000000034 INF: Y Motor: Moved to 64.5335 after 2370 ms
17-02-28 20:07:40.642 -08 000000034 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:07:40.704 -08 000000034 INF: Y Motor: Recv v 4096\r
17-02-28 20:07:40.704 -08 000000034 INF: Y Motor: Status After move finished OK:
17-02-28 20:07:40.704 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:40.766 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:07:40.766 -08 000000034 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:40.766 -08 000000034 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:07:40.828 -08 000000034 INF: Y Motor: Recv v 402653184\r
17-02-28 20:07:40.828 -08 000000034 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:07:40.828 -08 000000034 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:07:40.828 -08 000000034 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:07:40.890 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:07:40.890 -08 000000034 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:07:40.890 -08 000000034 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:07:40.890 -08 000000034 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:40.956 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:07:40.956 -08 000000034 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:07:40.956 -08 000000034 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:41.017 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:07:41.017 -08 000000034 INF: ======================================
17-02-28 20:07:41.018 -08 000000090 INF: ===================Move X,Y===================
17-02-28 20:07:41.020 -08 000000090 INF: ======================================
17-02-28 20:07:41.021 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:41.022 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:41.022 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:07:41.022 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:07:41.079 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:07:41.079 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:07:41.139 -08 000000097 INF: FPGA: Recv ZFREQCL
17-02-28 20:07:41.139 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:07:41.140 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:41.140 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:07:41.201 -08 000000033 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:07:41.201 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:07:41.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:41.202 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:41.203 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:07:41.203 -08 000000030 INF: ===================Set YMotor gains for scans===================
17-02-28 20:07:41.203 -08 000000030 INF: ======================================
17-02-28 20:07:41.203 -08 000000070 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:07:41.204 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:07:41.205 -08 000000070 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:07:41.206 -08 000000070 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:07:41.206 -08 000000070 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:07:41.263 -08 000000102 INF: FPGA: Recv TDIYPOS
17-02-28 20:07:41.263 -08 000000070 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:07:41.265 -08 000000070 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:07:41.265 -08 000000070 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:07:41.325 -08 000000069 INF: FPGA: Recv TDIYARM2
17-02-28 20:07:41.325 -08 000000070 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:07:41.327 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:07:41.328 -08 000000070 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:07:41.328 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:07:41.330 -08 000000070 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:07:41.331 -08 000000070 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:07:41.331 -08 000000070 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:07:41.697 -08 000000070 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:07:41.697 -08 000000070 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:07:41.697 -08 000000070 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:07:41.712 -08 000000070 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:07:41.714 -08 000000070 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:07:42.094 -08 000000070 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:07:42.094 -08 000000070 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:07:42.094 -08 000000070 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:07:42.110 -08 000000070 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:07:42.112 -08 000000070 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:07:42.113 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:07:42.114 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:42.115 -08 000000070 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:07:42.115 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:42.117 -08 000000070 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:07:42.117 -08 000000070 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:07:42.117 -08 000000070 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:07:42.117 -08 000000070 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:07:42.140 -08 000000027 INF: FPGA: Recv ZYT 
17-02-28 20:07:42.141 -08 000000070 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:07:42.141 -08 000000070 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:07:42.200 -08 000000091 INF: FPGA: Recv ZARM
17-02-28 20:07:42.200 -08 000000070 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.3774 ms
17-02-28 20:07:42.200 -08 000000070 INF: Z Motor: ArmAbsStepped took 83.1446 ms
17-02-28 20:07:42.200 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:42.201 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:07:42.203 -08 000000070 INF: ======================================
17-02-28 20:07:42.204 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:42.205 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:42.205 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:42.205 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:42.206 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:42.207 -08 000000092 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:07:42.207 -08 000000045 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:07:42.207 -08 000000092 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:07:42.207 -08 000000092 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:07:42.207 -08 000000092 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:07:42.207 -08 000000092 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:07:42.207 -08 000000045 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:07:42.207 -08 000000045 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:07:42.207 -08 000000045 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:07:42.211 -08 000000045 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:07:42.573 -08 000000035 INF: FPGA: Recv EX1MV
17-02-28 20:07:42.573 -08 000000035 INF: FPGA: Recv EX2MV
17-02-28 20:07:42.573 -08 000000045 INF: Excitation Filter 2: Moved -107 steps in 365.6837 ms
17-02-28 20:07:42.573 -08 000000045 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.784 ms
17-02-28 20:07:42.573 -08 000000045 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.8688 ms
17-02-28 20:07:42.573 -08 000000092 INF: Excitation Filter 1: Moved -107 steps in 365.9255 ms
17-02-28 20:07:42.573 -08 000000092 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.1266 ms
17-02-28 20:07:42.573 -08 000000092 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.2076 ms
17-02-28 20:07:42.573 -08 000000045 INF: ======================================
17-02-28 20:07:42.573 -08 000000092 INF: ======================================
17-02-28 20:07:42.574 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:42.576 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:42.576 -08 000000104 INF: ===================Serial===================
17-02-28 20:07:42.576 -08 000000025 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:42.577 -08 000000067 INF: ===================Move Y Motor without settling===================
17-02-28 20:07:42.577 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:07:42.577 -08 000000067 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:07:42.577 -08 000000067 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:07:42.577 -08 000000067 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:42.577 -08 000000104 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:07:42.577 -08 000000025 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:07:42.577 -08 000000104 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:07:42.577 -08 000000030 INF: ===================Camera TDI, Parallel===================
17-02-28 20:07:42.578 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:07:42.578 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:07:42.579 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:42.579 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:42.580 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:42.580 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:42.580 -08 000000025 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:07:42.637 -08 000000067 INF: Y Motor: Recv ok\r
17-02-28 20:07:42.637 -08 000000067 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:07:42.637 -08 000000067 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:42.702 -08 000000067 INF: Y Motor: Recv ok\r
17-02-28 20:07:42.702 -08 000000067 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:42.729 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:42.729 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:42.730 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:42.730 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:42.764 -08 000000067 INF: Y Motor: Recv v 0\r
17-02-28 20:07:42.764 -08 000000067 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:42.764 -08 000000067 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:07:42.764 -08 000000067 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:07:42.826 -08 000000067 INF: Y Motor: Recv ok\r
17-02-28 20:07:42.826 -08 000000067 INF: Y Motor: Start the move command
17-02-28 20:07:42.826 -08 000000067 INF: Y Motor: Xmit t 1\r
17-02-28 20:07:42.879 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:42.879 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:42.880 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:42.880 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:42.889 -08 000000067 INF: Y Motor: Recv ok\r
17-02-28 20:07:42.889 -08 000000067 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:07:42.889 -08 000000067 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:43.012 -08 000000067 INF: Y Motor: Unshifted Position: 5935330
17-02-28 20:07:43.029 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:43.029 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:43.030 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:43.030 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:43.062 -08 000000067 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:43.179 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:07:43.179 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:07:43.179 -08 000000053 INF: ===================Camera #0 Frame #1===================
17-02-28 20:07:43.180 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:07:43.180 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:07:43.180 -08 000000089 INF: ===================Camera #2 Frame #1===================
17-02-28 20:07:43.190 -08 000000067 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:43.326 -08 000000067 INF: Y Motor: Unshifted Position: 5888331
17-02-28 20:07:43.332 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:07:43.332 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2
17-02-28 20:07:43.332 -08 000000053 INF: ===================Camera #0 Frame #2===================
17-02-28 20:07:43.333 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:07:43.333 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:07:43.333 -08 000000089 INF: ===================Camera #2 Frame #3===================
17-02-28 20:07:43.376 -08 000000067 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:43.485 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:07:43.485 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:07:43.486 -08 000000053 INF: ===================Camera #0 Frame #4===================
17-02-28 20:07:43.490 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:07:43.490 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:07:43.490 -08 000000089 INF: ===================Camera #2 Frame #4===================
17-02-28 20:07:43.500 -08 000000067 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:43.637 -08 000000067 INF: Y Motor: Unshifted Position: 5841669
17-02-28 20:07:43.642 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:07:43.642 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:07:43.642 -08 000000053 INF: ===================Camera #0 Frame #5===================
17-02-28 20:07:43.643 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:07:43.643 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:07:43.643 -08 000000089 INF: ===================Camera #2 Frame #5===================
17-02-28 20:07:43.687 -08 000000067 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:43.696 -08 000000078 INF: FPGA: Recv ZWAIT 
17-02-28 20:07:43.696 -08 000000078 INF: FPGA: Recv TDIYWAIT
17-02-28 20:07:43.696 -08 000000025 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:43.697 -08 000000104 INF: ===================Serial===================
17-02-28 20:07:43.698 -08 000000025 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:07:43.698 -08 000000104 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:07:43.699 -08 000000104 INF: ===================Serial===================
17-02-28 20:07:43.699 -08 000000103 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:07:43.699 -08 000000036 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:07:43.699 -08 000000103 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:07:43.699 -08 000000103 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:07:43.699 -08 000000103 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:07:43.699 -08 000000036 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:07:43.699 -08 000000036 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:07:43.699 -08 000000036 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:07:43.699 -08 000000103 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:07:43.700 -08 000000104 INF: ======================================
17-02-28 20:07:43.702 -08 000000036 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:07:43.795 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:07:43.795 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:07:43.795 -08 000000053 INF: ===================Camera #0 Frame #6===================
17-02-28 20:07:43.796 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:07:43.796 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:07:43.796 -08 000000089 INF: ===================Camera #2 Frame #6===================
17-02-28 20:07:43.798 -08 000000053 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:07:43.799 -08 000000053 INF: ===================CameraTDI Cleanup===================
17-02-28 20:07:43.799 -08 000000089 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:07:43.800 -08 000000089 INF: ===================CameraTDI Cleanup===================
17-02-28 20:07:43.810 -08 000000067 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:43.824 -08 000000053 INF: Camera #0 ReleaseBuffer
17-02-28 20:07:43.824 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:07:43.825 -08 000000053 INF: ======================================
17-02-28 20:07:43.849 -08 000000089 INF: Camera #2 ReleaseBuffer
17-02-28 20:07:43.849 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:07:43.850 -08 000000089 INF: ======================================
17-02-28 20:07:43.852 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:07:43.853 -08 000000030 INF: ======================================
17-02-28 20:07:43.949 -08 000000067 INF: Y Motor: Unshifted Position: 5797055
17-02-28 20:07:43.999 -08 000000067 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:44.070 -08 000000094 INF: FPGA: Recv EX1MV
17-02-28 20:07:44.070 -08 000000103 INF: Excitation Filter 1: Moved 107 steps in 370.6764 ms
17-02-28 20:07:44.070 -08 000000103 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.7844 ms
17-02-28 20:07:44.070 -08 000000103 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.8821 ms
17-02-28 20:07:44.070 -08 000000103 INF: ======================================
17-02-28 20:07:44.135 -08 000000077 INF: FPGA: Recv EX2MV
17-02-28 20:07:44.135 -08 000000036 INF: Excitation Filter 2: Moved 107 steps in 435.5902 ms
17-02-28 20:07:44.135 -08 000000036 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 435.686 ms
17-02-28 20:07:44.135 -08 000000036 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 435.7517 ms
17-02-28 20:07:44.135 -08 000000036 INF: ======================================
17-02-28 20:07:44.136 -08 000000025 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:44.137 -08 000000067 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:07:44.137 -08 000000067 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:07:44.137 -08 000000067 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:44.138 -08 000000025 INF: ======================================
17-02-28 20:07:44.199 -08 000000067 INF: Y Motor: Recv v 0\r
17-02-28 20:07:44.199 -08 000000067 INF: Y Motor: Moved to 62.9704 after 1310 ms
17-02-28 20:07:44.199 -08 000000067 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:07:44.261 -08 000000067 INF: Y Motor: Recv v 4097\r
17-02-28 20:07:44.261 -08 000000067 INF: Y Motor: Status After move finished OK:
17-02-28 20:07:44.261 -08 000000067 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:44.323 -08 000000067 INF: Y Motor: Recv v 0\r
17-02-28 20:07:44.323 -08 000000067 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:44.323 -08 000000067 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:07:44.385 -08 000000067 INF: Y Motor: Recv v 134217728\r
17-02-28 20:07:44.385 -08 000000067 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:07:44.385 -08 000000067 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:07:44.385 -08 000000067 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:07:44.447 -08 000000067 INF: Y Motor: Recv v 0\r
17-02-28 20:07:44.447 -08 000000067 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:07:44.447 -08 000000067 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:07:44.447 -08 000000067 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:44.509 -08 000000067 INF: Y Motor: Recv ok\r
17-02-28 20:07:44.509 -08 000000067 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:07:44.509 -08 000000067 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:44.574 -08 000000067 INF: Y Motor: Recv ok\r
17-02-28 20:07:44.574 -08 000000067 INF: ======================================
17-02-28 20:07:44.575 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:44.576 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:07:44.577 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:44.577 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:07:44.634 -08 000000097 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:07:44.634 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:07:44.696 -08 000000010 INF: FPGA: Recv TDIYERD 6297044
17-02-28 20:07:44.696 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:07:44.758 -08 000000092 INF: FPGA: Recv ZADCR 2429
17-02-28 20:07:44.758 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:07:44.758 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:07:44.820 -08 000000039 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:07:44.820 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:07:44.820 -08 000000042 INF: TDIScan finished after 6852.5214 ms
17-02-28 20:07:44.820 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:07:44.820 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:07:44.820 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:07:44.882 -08 000000010 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:07:44.883 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:44.883 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:44.884 -08 000000067 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:07:44.884 -08 000000044 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:07:44.884 -08 000000076 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:07:44.884 -08 000000067 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:07:44.884 -08 000000067 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:07:44.884 -08 000000044 INF: ======================================
17-02-28 20:07:44.885 -08 000000076 INF: ======================================
17-02-28 20:07:44.946 -08 000000067 INF: Y Motor: Recv ok\r
17-02-28 20:07:44.946 -08 000000067 INF: ======================================
17-02-28 20:07:44.947 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:44.948 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:44.949 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:07:44.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:44.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:07:45.023 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:45.023 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:07:45.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:45.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:07:45.147 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:07:45.147 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:07:45.147 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:07:45.148 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:07:45.156 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:07:45.156 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-02-28 20:07:45.156 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:07:45.848 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-02-28 20:07:45.872 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0843304012775989Best Z position at top surface = -0.157666861010419Best Z position at top surface + compensator offset = -0.134966861010419 C:2,L:1,B
17-02-28 20:07:45.872 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.157666861010419
17-02-28 20:07:45.872 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.96555
17-02-28 20:07:45.872 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0843304012775989
17-02-28 20:07:45.872 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.61262
17-02-28 20:07:45.872 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0843304012775989.
17-02-28 20:07:45.873 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:07:46.009 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:07:46.009 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:07:46.067 -08 000000085 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:46.067 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:07:46.068 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:46.069 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:46.070 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:46.070 -08 000000092 INF: ===================Move Tilt Motor 1===================
17-02-28 20:07:46.070 -08 000000068 INF: ===================Move Tilt Motor 3===================
17-02-28 20:07:46.070 -08 000000092 INF: Tilt Motor 1: Moving to 5.0228 mm, started at 5.0216 mm, delta = 0.0012 mm
17-02-28 20:07:46.070 -08 000000092 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:46.071 -08 000000068 INF: Tilt Motor 3: Moving to 5.3020 mm, started at 5.3030 mm, delta = -0.0010 mm
17-02-28 20:07:46.071 -08 000000044 INF: ===================Move Tilt Motor 2===================
17-02-28 20:07:46.071 -08 000000044 INF: ======================================
17-02-28 20:07:46.073 -08 000000068 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:46.132 -08 000000101 INF: FPGA: Recv T1RD 19770
17-02-28 20:07:46.132 -08 000000101 INF: FPGA: Recv T3RD 20877
17-02-28 20:07:46.132 -08 000000092 INF: Tilt Motor 1: Encoder: at motor step 3295 + 0/6
17-02-28 20:07:46.132 -08 000000092 INF: Tilt Motor 1: Moving to 19775 encoder counts
17-02-28 20:07:46.132 -08 000000092 INF: FPGA: Xmit T1MOVETO 19775\n
17-02-28 20:07:46.132 -08 000000068 INF: Tilt Motor 3: Encoder: at motor step 3479 + 3/6
17-02-28 20:07:46.132 -08 000000068 INF: Tilt Motor 3: Moving to 20874 encoder counts
17-02-28 20:07:46.133 -08 000000068 INF: FPGA: Xmit T3MOVETO 20874\n
17-02-28 20:07:46.257 -08 000000047 INF: FPGA: Recv T3MOVETO 0
17-02-28 20:07:46.257 -08 000000047 INF: FPGA: Recv T1MOVETO 1
17-02-28 20:07:46.257 -08 000000068 INF: Tilt Motor 3: To move from 5.303 to 5.302 (-0.001 mm) should take 0 steps, but required 0 steps (0.000 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:07:46.257 -08 000000092 INF: Tilt Motor 1: To move from 5.022 to 5.023 (0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:07:46.257 -08 000000068 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:46.258 -08 000000092 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:46.319 -08 000000102 INF: FPGA: Recv T3RD 20877
17-02-28 20:07:46.319 -08 000000102 INF: FPGA: Recv T1RD 19776
17-02-28 20:07:46.319 -08 000000068 INF: Tilt Motor 3: Encoder: at motor step 3479 + 3/6
17-02-28 20:07:46.319 -08 000000092 INF: Tilt Motor 1: Encoder: at motor step 3296 + 0/6
17-02-28 20:07:46.319 -08 000000068 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:46.320 -08 000000092 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:46.381 -08 000000065 INF: FPGA: Recv T3RD 20877
17-02-28 20:07:46.381 -08 000000065 INF: FPGA: Recv T1RD 19776
17-02-28 20:07:46.381 -08 000000092 INF: Tilt Motor 1: Encoder: at motor step 3296 + 0/6
17-02-28 20:07:46.381 -08 000000092 INF: FPGA: Xmit T1RD\n
17-02-28 20:07:46.381 -08 000000068 INF: Tilt Motor 3: Encoder: at motor step 3479 + 3/6
17-02-28 20:07:46.382 -08 000000068 INF: FPGA: Xmit T3RD\n
17-02-28 20:07:46.443 -08 000000103 INF: FPGA: Recv T1RD 19776
17-02-28 20:07:46.443 -08 000000103 INF: FPGA: Recv T3RD 20877
17-02-28 20:07:46.443 -08 000000068 INF: Tilt Motor 3: Encoder: at motor step 3479 + 3/6
17-02-28 20:07:46.443 -08 000000068 INF: Tilt Motor 3: After move to 5.3020, error = 0.0007, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:46.443 -08 000000092 INF: Tilt Motor 1: Encoder: at motor step 3296 + 0/6
17-02-28 20:07:46.443 -08 000000068 INF: Tilt Motor 3: Moved to 5.3028 after 371.655 ms
17-02-28 20:07:46.443 -08 000000092 INF: Tilt Motor 1: After move to 5.0228, error = 0.0003, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:46.443 -08 000000092 INF: Tilt Motor 1: Moved to 5.0231 after 371.8911 ms
17-02-28 20:07:46.443 -08 000000068 INF: ======================================
17-02-28 20:07:46.444 -08 000000092 INF: ======================================
17-02-28 20:07:46.445 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:46.445 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:46.446 -08 000000042 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.02278966876241, m2=5.35509691590693, m3=5.30201091590694
17-02-28 20:07:46.446 -08 000000042 INF: ETF Best Z: -0.0843304 mm (22106 DAC)
17-02-28 20:07:46.446 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:46.447 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:46.447 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:07:46.447 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:46.448 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:46.905 -08 000000042 INF: Swath 1 position calculated to be: {X=68.62818, Y=39.78827} from estimated center X= 69.147, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:07:46.905 -08 000000042 INF: Swath 2 position calculated to be: {X=69.73618, Y=39.78827} from estimated center X= 69.147, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:07:46.911 -08 000000042 INF: Swath 0: Converted transform from (-59.70655, 3.705361) pixels to (-0.0207, 0.00138) mm.
17-02-28 20:07:46.917 -08 000000042 INF: Swath 1: Converted transform from (-88.86094, 1.042864) pixels to (-0.030705, 0.000345) mm.
17-02-28 20:07:46.918 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827===================
17-02-28 20:07:46.919 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827===================
17-02-28 20:07:46.919 -08 000000042 INF: Transformed XStagePosition from 68.62818 mm to 68.607481457293 mm.
17-02-28 20:07:46.931 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5796578015443 mm.
17-02-28 20:07:46.931 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3796578015443 mm.
17-02-28 20:07:46.931 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4704078015443 mm.
17-02-28 20:07:46.933 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:46.933 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:07:46.933 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:46.933 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = A_1
17-02-28 20:07:46.942 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:46.942 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:46.943 -08 000000085 INF: ===================MoveEmissionFilters===================
17-02-28 20:07:46.943 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:07:46.943 -08 000000080 INF: ===================Move X,Y===================
17-02-28 20:07:46.944 -08 000000094 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:07:46.944 -08 000000101 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:07:46.944 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:07:46.944 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:07:46.944 -08 000000080 INF: ===================Move X,Y, Parallel===================
17-02-28 20:07:46.944 -08 000000089 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:07:46.944 -08 000000078 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:07:46.944 -08 000000078 INF: Z Motor: Moving to -0.1043 mm, started at -0.0100 mm
17-02-28 20:07:46.944 -08 000000094 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:07:46.944 -08 000000078 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:07:46.945 -08 000000101 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:07:46.945 -08 000000033 INF: ===================Move X Motor without settling===================
17-02-28 20:07:46.945 -08 000000100 INF: ===================Move Y Motor without settling===================
17-02-28 20:07:46.945 -08 000000089 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:07:46.945 -08 000000100 INF: Y Motor: Moving to 64.5797 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:07:46.945 -08 000000033 INF: X Motor: Xmit PR VM\n
17-02-28 20:07:46.945 -08 000000072 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:07:46.945 -08 000000010 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:07:46.945 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:07:46.945 -08 000000062 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:07:46.946 -08 000000066 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:07:46.946 -08 000000072 INF: ======================================
17-02-28 20:07:46.946 -08 000000104 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:07:46.946 -08 000000027 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:07:46.946 -08 000000062 INF: ======================================
17-02-28 20:07:46.946 -08 000000103 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:07:46.946 -08 000000066 INF: ======================================
17-02-28 20:07:46.946 -08 000000068 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:07:46.947 -08 000000027 INF: ======================================
17-02-28 20:07:46.947 -08 000000068 INF: ======================================
17-02-28 20:07:46.947 -08 000000104 INF: ======================================
17-02-28 20:07:46.948 -08 000000103 INF: ======================================
17-02-28 20:07:46.948 -08 000000101 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:07:46.948 -08 000000100 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:07:46.948 -08 000000100 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:46.948 -08 000000010 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:07:46.948 -08 000000089 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:07:46.949 -08 000000010 INF: ======================================
17-02-28 20:07:46.949 -08 000000101 INF: ======================================
17-02-28 20:07:46.949 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:07:46.950 -08 000000089 INF: ======================================
17-02-28 20:07:46.950 -08 000000094 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:07:46.950 -08 000000052 INF: ======================================
17-02-28 20:07:46.951 -08 000000094 INF: ======================================
17-02-28 20:07:46.952 -08 000000085 INF: ======================================
17-02-28 20:07:46.960 -08 000000059 INF: FPGA: Recv ZTRG 
17-02-28 20:07:46.960 -08 000000078 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:07:47.022 -08 000000044 INF: FPGA: Recv ZYT 
17-02-28 20:07:47.022 -08 000000078 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:07:47.022 -08 000000078 INF: FPGA: Xmit ZMV 27349\n
17-02-28 20:07:47.024 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:07:47.024 -08 000000100 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:07:47.024 -08 000000100 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:47.026 -08 000000033 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:07:47.026 -08 000000033 INF: X Motor: Xmit PR VI\n
17-02-28 20:07:47.082 -08 000000102 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:07:47.082 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:07:47.084 -08 000000033 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:07:47.084 -08 000000033 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:07:47.084 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:07:47.084 -08 000000033 INF: X Motor: Moving to 68.6075 mm @15.000 mm/sec, started at 69.1855 mm
17-02-28 20:07:47.084 -08 000000100 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:47.084 -08 000000033 INF: X Motor: Xmit MA 3935\n
17-02-28 20:07:47.147 -08 000000085 INF: FPGA: Recv ZMV 
17-02-28 20:07:47.147 -08 000000078 INF: Z Motor: MoveAndTrigger 'ZMV' command took 125.0123 ms
17-02-28 20:07:47.147 -08 000000078 INF: FPGA: Xmit ZDACR\n
17-02-28 20:07:47.149 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:07:47.149 -08 000000100 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:47.149 -08 000000033 INF: X Motor: Recv MA 3935\r\n>
17-02-28 20:07:47.149 -08 000000100 INF: Y Motor: Set target position to 5957966 encoder counts
17-02-28 20:07:47.149 -08 000000100 INF: Y Motor: Xmit s r0xca 5957966\r
17-02-28 20:07:47.149 -08 000000033 INF: X Motor: WaitUntilStopped 60039
17-02-28 20:07:47.209 -08 000000081 INF: FPGA: Recv ZDACR 27349
17-02-28 20:07:47.209 -08 000000078 INF: Z Motor: MoveAndTrigger took 264.6086 ms w/comms
17-02-28 20:07:47.209 -08 000000078 INF: Z Motor: After move to -0.1043, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:07:47.209 -08 000000078 INF: Z Motor: MoveAbsStepped took 264.7477 ms
17-02-28 20:07:47.209 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:07:47.211 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:07:47.211 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:07:47.211 -08 000000100 INF: Y Motor: Start the move command
17-02-28 20:07:47.211 -08 000000100 INF: Y Motor: Xmit t 1\r
17-02-28 20:07:47.212 -08 000000055 INF: ===================TDI Scan Setup===================
17-02-28 20:07:47.212 -08 000000072 INF: ===================Camera Arm TDI===================
17-02-28 20:07:47.212 -08 000000055 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:47.213 -08 000000072 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:07:47.213 -08 000000055 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:07:47.213 -08 000000072 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:07:47.213 -08 000000055 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:07:47.214 -08 000000055 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:07:47.271 -08 000000091 INF: FPGA: Recv ZSEL 
17-02-28 20:07:47.271 -08 000000055 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:07:47.272 -08 000000055 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:07:47.273 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:07:47.273 -08 000000100 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:07:47.273 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:47.333 -08 000000065 INF: FPGA: Recv TDIBB
17-02-28 20:07:47.333 -08 000000055 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:07:47.334 -08 000000055 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:07:47.335 -08 000000055 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:47.336 -08 000000055 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:07:47.337 -08 000000055 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:07:47.337 -08 000000055 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:07:47.396 -08 000000095 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:47.396 -08 000000055 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:47.398 -08 000000055 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:07:47.398 -08 000000055 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:47.399 -08 000000100 INF: Y Motor: Unshifted Position: 5878533
17-02-28 20:07:47.400 -08 000000055 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:07:47.400 -08 000000055 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:07:47.400 -08 000000055 INF: Z Motor: Arming to move to -0.0643 mm
17-02-28 20:07:47.400 -08 000000055 INF: FPGA: Xmit ZYT 6437966 4\n
17-02-28 20:07:47.449 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:47.457 -08 000000076 INF: FPGA: Recv ZYT 
17-02-28 20:07:47.457 -08 000000055 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6378533 enc / 63.785 mm / ) = 6437966 enc / 64.380 mm
17-02-28 20:07:47.457 -08 000000055 INF: FPGA: Xmit ZARM 16864\n
17-02-28 20:07:47.519 -08 000000036 INF: FPGA: Recv ZARM
17-02-28 20:07:47.519 -08 000000055 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0123 ms
17-02-28 20:07:47.519 -08 000000055 INF: Z Motor: ArmAbsStepped took 119.0121 ms
17-02-28 20:07:47.519 -08 000000055 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:47.520 -08 000000055 INF: ===================TDI Scan Setup===================
17-02-28 20:07:47.522 -08 000000055 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:07:47.522 -08 000000055 INF: ===================TDI Scan Setup===================
17-02-28 20:07:47.524 -08 000000055 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:07:47.524 -08 000000055 INF: ===================TDI Scan Setup===================
17-02-28 20:07:47.525 -08 000000055 INF: ======================================
17-02-28 20:07:47.571 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:47.583 -08 000000033 INF: X Motor: Xmit PR ER\n
17-02-28 20:07:47.649 -08 000000033 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:07:47.649 -08 000000033 INF: X Motor: Moved to 68.6069 after 500 ms
17-02-28 20:07:47.649 -08 000000033 INF: ======================================
17-02-28 20:07:47.710 -08 000000100 INF: Y Motor: Unshifted Position: 5957968
17-02-28 20:07:47.710 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:07:47.710 -08 000000100 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:47.772 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:07:47.772 -08 000000100 INF: Y Motor: Moved to 64.5797 after 499 ms
17-02-28 20:07:47.772 -08 000000100 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:07:47.834 -08 000000100 INF: Y Motor: Recv v 4096\r
17-02-28 20:07:47.834 -08 000000100 INF: Y Motor: Status After move finished OK:
17-02-28 20:07:47.834 -08 000000100 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:47.896 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:07:47.896 -08 000000100 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:47.896 -08 000000100 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:07:47.958 -08 000000100 INF: Y Motor: Recv v 402653184\r
17-02-28 20:07:47.958 -08 000000100 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:07:47.958 -08 000000100 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:07:47.958 -08 000000100 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:07:48.020 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:07:48.020 -08 000000100 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:07:48.020 -08 000000100 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:07:48.020 -08 000000100 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:48.082 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:07:48.082 -08 000000100 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:07:48.082 -08 000000100 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:48.147 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:07:48.147 -08 000000100 INF: ======================================
17-02-28 20:07:48.148 -08 000000080 INF: ===================Move X,Y===================
17-02-28 20:07:48.149 -08 000000080 INF: ======================================
17-02-28 20:07:48.152 -08 000000072 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:07:48.152 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:07:48.152 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:07:48.167 -08 000000072 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:07:48.169 -08 000000072 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:07:49.145 -08 000000072 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:07:49.145 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:07:49.145 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:07:49.160 -08 000000072 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:07:49.162 -08 000000072 INF: ===================Camera Arm TDI===================
17-02-28 20:07:49.163 -08 000000072 INF: ======================================
17-02-28 20:07:49.164 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:07:49.165 -08 000000078 INF: ======================================
17-02-28 20:07:49.166 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:49.167 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:49.167 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:07:49.167 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:07:49.208 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:07:49.208 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:07:49.269 -08 000000036 INF: FPGA: Recv ZFREQCL
17-02-28 20:07:49.269 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:07:49.269 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:49.269 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:07:49.330 -08 000000069 INF: FPGA: Recv TDIYERD 6457967
17-02-28 20:07:49.330 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457967 counts (64.580 mm)
17-02-28 20:07:49.330 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:49.331 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:49.331 -08 000000076 INF: ===================TDI FPGA Arm===================
17-02-28 20:07:49.331 -08 000000104 INF: ===================Set YMotor gains for scans===================
17-02-28 20:07:49.332 -08 000000104 INF: ======================================
17-02-28 20:07:49.332 -08 000000076 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:07:49.333 -08 000000076 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:07:49.333 -08 000000076 INF: FPGA: Xmit TDIYPOS 6347041\n
17-02-28 20:07:49.392 -08 000000094 INF: FPGA: Recv TDIYPOS
17-02-28 20:07:49.392 -08 000000076 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:07:49.393 -08 000000076 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:07:49.394 -08 000000076 INF: FPGA: Xmit TDIYARM3 139264 6437966 1 1\n
17-02-28 20:07:49.454 -08 000000065 INF: FPGA: Recv TDIYARM3
17-02-28 20:07:49.454 -08 000000076 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:07:49.455 -08 000000076 INF: ===================TDI FPGA Arm===================
17-02-28 20:07:49.456 -08 000000076 INF: ======================================
17-02-28 20:07:49.457 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:07:49.458 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:49.458 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:07:49.458 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:07:49.459 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:07:49.460 -08 000000104 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:07:49.460 -08 000000047 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:07:49.460 -08 000000104 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:07:49.460 -08 000000104 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:07:49.460 -08 000000104 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:07:49.460 -08 000000047 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:07:49.460 -08 000000047 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:07:49.460 -08 000000047 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:07:49.460 -08 000000104 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:07:49.461 -08 000000047 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:07:49.829 -08 000000102 INF: FPGA: Recv EX2MV
17-02-28 20:07:49.829 -08 000000102 INF: FPGA: Recv EX1MV
17-02-28 20:07:49.829 -08 000000047 INF: Excitation Filter 1: Moved -107 steps in 368.8041 ms
17-02-28 20:07:49.829 -08 000000104 INF: Excitation Filter 2: Moved -107 steps in 368.9041 ms
17-02-28 20:07:49.829 -08 000000047 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.8915 ms
17-02-28 20:07:49.829 -08 000000047 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.9999 ms
17-02-28 20:07:49.829 -08 000000104 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.0413 ms
17-02-28 20:07:49.829 -08 000000104 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.2139 ms
17-02-28 20:07:49.829 -08 000000047 INF: ======================================
17-02-28 20:07:49.829 -08 000000104 INF: ======================================
17-02-28 20:07:49.830 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:07:49.831 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:07:49.832 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:07:49.832 -08 000000036 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:49.832 -08 000000069 INF: ===================FPGA Z Wait===================
17-02-28 20:07:49.832 -08 000000096 INF: ===================Move Y Motor without settling===================
17-02-28 20:07:49.833 -08 000000069 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:07:49.833 -08 000000096 INF: Y Motor: Moving to 14.9313 mm @6.500 mm/sec, started at 64.5797 mm
17-02-28 20:07:49.833 -08 000000096 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:07:49.833 -08 000000096 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:49.833 -08 000000068 INF: ===================Camera TDI, Parallel===================
17-02-28 20:07:49.833 -08 000000036 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:07:49.834 -08 000000103 INF: ===================Camera TDI===================
17-02-28 20:07:49.834 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:07:49.834 -08 000000036 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:07:49.836 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:49.836 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:49.838 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:49.838 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:49.894 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:07:49.894 -08 000000096 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:07:49.894 -08 000000096 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:49.955 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:07:49.955 -08 000000096 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:49.986 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:49.986 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:49.988 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:49.988 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:50.017 -08 000000096 INF: Y Motor: Recv v 0\r
17-02-28 20:07:50.017 -08 000000096 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:50.017 -08 000000096 INF: Y Motor: Set target position to 993132 encoder counts
17-02-28 20:07:50.017 -08 000000096 INF: Y Motor: Xmit s r0xca 993132\r
17-02-28 20:07:50.079 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:07:50.079 -08 000000096 INF: Y Motor: Start the move command
17-02-28 20:07:50.079 -08 000000096 INF: Y Motor: Xmit t 1\r
17-02-28 20:07:50.136 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:50.136 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:50.138 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:07:50.138 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:07:50.144 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:07:50.144 -08 000000096 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:07:50.144 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:50.204 -08 000000067 INF: FPGA: Recv ZWAIT 
17-02-28 20:07:50.204 -08 000000069 INF: ======================================
17-02-28 20:07:50.270 -08 000000096 INF: Y Motor: Unshifted Position: 5894164
17-02-28 20:07:50.286 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:07:50.286 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:07:50.286 -08 000000103 INF: ===================Camera #0 Frame #5===================
17-02-28 20:07:50.288 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:07:50.288 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:07:50.288 -08 000000100 INF: ===================Camera #2 Frame #5===================
17-02-28 20:07:50.320 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:50.442 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:50.453 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:07:50.453 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:07:50.453 -08 000000103 INF: ===================Camera #0 Frame #11===================
17-02-28 20:07:50.455 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:07:50.455 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:07:50.455 -08 000000100 INF: ===================Camera #2 Frame #11===================
17-02-28 20:07:50.578 -08 000000096 INF: Y Motor: Unshifted Position: 5692663
17-02-28 20:07:50.623 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:07:50.623 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:07:50.623 -08 000000103 INF: ===================Camera #0 Frame #17===================
17-02-28 20:07:50.626 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:07:50.626 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:07:50.626 -08 000000100 INF: ===================Camera #2 Frame #17===================
17-02-28 20:07:50.628 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:50.755 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:50.793 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:07:50.793 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:07:50.793 -08 000000103 INF: ===================Camera #0 Frame #23===================
17-02-28 20:07:50.796 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:07:50.796 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:07:50.796 -08 000000100 INF: ===================Camera #2 Frame #23===================
17-02-28 20:07:50.891 -08 000000096 INF: Y Motor: Unshifted Position: 5489004
17-02-28 20:07:50.941 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:50.963 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:07:50.963 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:07:50.963 -08 000000103 INF: ===================Camera #0 Frame #30===================
17-02-28 20:07:50.967 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:07:50.967 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:07:50.967 -08 000000100 INF: ===================Camera #2 Frame #30===================
17-02-28 20:07:51.065 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:51.136 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:07:51.136 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:07:51.136 -08 000000103 INF: ===================Camera #0 Frame #36===================
17-02-28 20:07:51.141 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:07:51.142 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:07:51.142 -08 000000100 INF: ===================Camera #2 Frame #36===================
17-02-28 20:07:51.202 -08 000000096 INF: Y Motor: Unshifted Position: 5286854
17-02-28 20:07:51.252 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:51.306 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:07:51.306 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:07:51.306 -08 000000103 INF: ===================Camera #0 Frame #42===================
17-02-28 20:07:51.313 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:07:51.313 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:07:51.313 -08 000000100 INF: ===================Camera #2 Frame #42===================
17-02-28 20:07:51.379 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:51.476 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:07:51.476 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:07:51.476 -08 000000103 INF: ===================Camera #0 Frame #48===================
17-02-28 20:07:51.483 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:07:51.483 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:07:51.483 -08 000000100 INF: ===================Camera #2 Frame #49===================
17-02-28 20:07:51.515 -08 000000096 INF: Y Motor: Unshifted Position: 5083179
17-02-28 20:07:51.565 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:51.646 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:07:51.646 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:07:51.646 -08 000000103 INF: ===================Camera #0 Frame #55===================
17-02-28 20:07:51.657 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:07:51.657 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:07:51.657 -08 000000100 INF: ===================Camera #2 Frame #55===================
17-02-28 20:07:51.689 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:51.819 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:07:51.819 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:07:51.819 -08 000000103 INF: ===================Camera #0 Frame #61===================
17-02-28 20:07:51.826 -08 000000096 INF: Y Motor: Unshifted Position: 4878215
17-02-28 20:07:51.828 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:07:51.828 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:07:51.828 -08 000000100 INF: ===================Camera #2 Frame #61===================
17-02-28 20:07:51.876 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:51.988 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:07:51.988 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:07:51.988 -08 000000103 INF: ===================Camera #0 Frame #67===================
17-02-28 20:07:51.998 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:07:51.998 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:07:51.998 -08 000000100 INF: ===================Camera #2 Frame #68===================
17-02-28 20:07:52.003 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:52.141 -08 000000096 INF: Y Motor: Unshifted Position: 4677362
17-02-28 20:07:52.158 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:07:52.158 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:07:52.158 -08 000000103 INF: ===================Camera #0 Frame #74===================
17-02-28 20:07:52.173 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:07:52.173 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:07:52.173 -08 000000100 INF: ===================Camera #2 Frame #74===================
17-02-28 20:07:52.191 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:52.316 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:52.331 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:07:52.331 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:07:52.331 -08 000000103 INF: ===================Camera #0 Frame #80===================
17-02-28 20:07:52.344 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:07:52.344 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:07:52.344 -08 000000100 INF: ===================Camera #2 Frame #80===================
17-02-28 20:07:52.450 -08 000000096 INF: Y Motor: Unshifted Position: 4473039
17-02-28 20:07:52.500 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:52.501 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:07:52.501 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:07:52.501 -08 000000103 INF: ===================Camera #0 Frame #86===================
17-02-28 20:07:52.515 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:07:52.515 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:07:52.515 -08 000000100 INF: ===================Camera #2 Frame #87===================
17-02-28 20:07:52.627 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:52.671 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:07:52.671 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:07:52.671 -08 000000103 INF: ===================Camera #0 Frame #92===================
17-02-28 20:07:52.689 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:07:52.689 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:07:52.689 -08 000000100 INF: ===================Camera #2 Frame #93===================
17-02-28 20:07:52.763 -08 000000096 INF: Y Motor: Unshifted Position: 4271537
17-02-28 20:07:52.813 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:52.841 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:07:52.841 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:07:52.841 -08 000000103 INF: ===================Camera #0 Frame #99===================
17-02-28 20:07:52.860 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:07:52.860 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:07:52.860 -08 000000100 INF: ===================Camera #2 Frame #99===================
17-02-28 20:07:52.937 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:53.015 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:07:53.015 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:07:53.015 -08 000000103 INF: ===================Camera #0 Frame #105===================
17-02-28 20:07:53.031 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:07:53.031 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:07:53.031 -08 000000100 INF: ===================Camera #2 Frame #106===================
17-02-28 20:07:53.074 -08 000000096 INF: Y Motor: Unshifted Position: 4067216
17-02-28 20:07:53.124 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:53.185 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:07:53.185 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:07:53.185 -08 000000103 INF: ===================Camera #0 Frame #111===================
17-02-28 20:07:53.205 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:07:53.205 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:07:53.205 -08 000000100 INF: ===================Camera #2 Frame #112===================
17-02-28 20:07:53.249 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:53.355 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:07:53.355 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:07:53.355 -08 000000103 INF: ===================Camera #0 Frame #118===================
17-02-28 20:07:53.376 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:07:53.376 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:07:53.376 -08 000000100 INF: ===================Camera #2 Frame #118===================
17-02-28 20:07:53.388 -08 000000096 INF: Y Motor: Unshifted Position: 3864419
17-02-28 20:07:53.438 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:53.528 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:07:53.528 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:07:53.528 -08 000000103 INF: ===================Camera #0 Frame #124===================
17-02-28 20:07:53.546 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:07:53.546 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:07:53.546 -08 000000100 INF: ===================Camera #2 Frame #125===================
17-02-28 20:07:53.563 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:53.697 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:07:53.697 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:07:53.697 -08 000000103 INF: ===================Camera #0 Frame #130===================
17-02-28 20:07:53.699 -08 000000096 INF: Y Motor: Unshifted Position: 3661397
17-02-28 20:07:53.720 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:07:53.720 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:07:53.720 -08 000000100 INF: ===================Camera #2 Frame #131===================
17-02-28 20:07:53.749 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:53.867 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:07:53.867 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:07:53.867 -08 000000103 INF: ===================Camera #0 Frame #136===================
17-02-28 20:07:53.873 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:53.891 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:07:53.891 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:07:53.891 -08 000000100 INF: ===================Camera #2 Frame #137===================
17-02-28 20:07:54.012 -08 000000096 INF: Y Motor: Unshifted Position: 3458603
17-02-28 20:07:54.037 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:07:54.037 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:07:54.037 -08 000000103 INF: ===================Camera #0 Frame #143===================
17-02-28 20:07:54.062 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:54.062 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:07:54.062 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:07:54.062 -08 000000100 INF: ===================Camera #2 Frame #144===================
17-02-28 20:07:54.187 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:54.211 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:07:54.211 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:07:54.211 -08 000000103 INF: ===================Camera #0 Frame #149===================
17-02-28 20:07:54.236 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:07:54.236 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:07:54.236 -08 000000100 INF: ===================Camera #2 Frame #150===================
17-02-28 20:07:54.322 -08 000000096 INF: Y Motor: Unshifted Position: 3255583
17-02-28 20:07:54.372 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:54.381 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:07:54.381 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:07:54.381 -08 000000103 INF: ===================Camera #0 Frame #155===================
17-02-28 20:07:54.407 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:07:54.407 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:07:54.407 -08 000000100 INF: ===================Camera #2 Frame #156===================
17-02-28 20:07:54.499 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:54.550 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:07:54.550 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:07:54.550 -08 000000103 INF: ===================Camera #0 Frame #162===================
17-02-28 20:07:54.578 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:07:54.578 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:07:54.578 -08 000000100 INF: ===================Camera #2 Frame #163===================
17-02-28 20:07:54.635 -08 000000096 INF: Y Motor: Unshifted Position: 3054091
17-02-28 20:07:54.685 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:54.723 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:07:54.723 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:07:54.723 -08 000000103 INF: ===================Camera #0 Frame #168===================
17-02-28 20:07:54.752 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:07:54.752 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:07:54.752 -08 000000100 INF: ===================Camera #2 Frame #169===================
17-02-28 20:07:54.809 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:54.893 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:07:54.893 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:07:54.893 -08 000000103 INF: ===================Camera #0 Frame #174===================
17-02-28 20:07:54.923 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:07:54.923 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:07:54.923 -08 000000100 INF: ===================Camera #2 Frame #175===================
17-02-28 20:07:54.946 -08 000000096 INF: Y Motor: Unshifted Position: 2849775
17-02-28 20:07:54.996 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:55.063 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:07:55.063 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:07:55.063 -08 000000103 INF: ===================Camera #0 Frame #180===================
17-02-28 20:07:55.094 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:07:55.094 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:07:55.094 -08 000000100 INF: ===================Camera #2 Frame #182===================
17-02-28 20:07:55.123 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:55.233 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:07:55.233 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:07:55.233 -08 000000103 INF: ===================Camera #0 Frame #187===================
17-02-28 20:07:55.261 -08 000000096 INF: Y Motor: Unshifted Position: 2648281
17-02-28 20:07:55.268 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:07:55.268 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:07:55.268 -08 000000100 INF: ===================Camera #2 Frame #188===================
17-02-28 20:07:55.311 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:55.407 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:07:55.407 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:07:55.407 -08 000000103 INF: ===================Camera #0 Frame #193===================
17-02-28 20:07:55.433 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:55.439 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:07:55.439 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:07:55.439 -08 000000100 INF: ===================Camera #2 Frame #194===================
17-02-28 20:07:55.570 -08 000000096 INF: Y Motor: Unshifted Position: 2443965
17-02-28 20:07:55.577 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:07:55.577 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:07:55.577 -08 000000103 INF: ===================Camera #0 Frame #199===================
17-02-28 20:07:55.610 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:07:55.610 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:07:55.610 -08 000000100 INF: ===================Camera #2 Frame #201===================
17-02-28 20:07:55.620 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:55.747 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:55.747 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:07:55.747 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:07:55.747 -08 000000103 INF: ===================Camera #0 Frame #206===================
17-02-28 20:07:55.785 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:07:55.785 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:07:55.785 -08 000000100 INF: ===================Camera #2 Frame #207===================
17-02-28 20:07:55.883 -08 000000096 INF: Y Motor: Unshifted Position: 2242467
17-02-28 20:07:55.921 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:07:55.921 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:07:55.921 -08 000000103 INF: ===================Camera #0 Frame #212===================
17-02-28 20:07:55.933 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:55.956 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:07:55.956 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:07:55.956 -08 000000100 INF: ===================Camera #2 Frame #213===================
17-02-28 20:07:56.057 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:56.091 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:07:56.091 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:07:56.091 -08 000000103 INF: ===================Camera #0 Frame #218===================
17-02-28 20:07:56.127 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:07:56.127 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:07:56.127 -08 000000100 INF: ===================Camera #2 Frame #220===================
17-02-28 20:07:56.179 -08 000000086 INF: RunCopyService queue size at 2/28/2017 8:07:56 PM is 2
17-02-28 20:07:56.197 -08 000000096 INF: Y Motor: Unshifted Position: 2038151
17-02-28 20:07:56.247 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:56.262 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:07:56.262 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:07:56.262 -08 000000103 INF: ===================Camera #0 Frame #225===================
17-02-28 20:07:56.302 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:07:56.302 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:07:56.302 -08 000000100 INF: ===================Camera #2 Frame #226===================
17-02-28 20:07:56.371 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:56.435 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:07:56.435 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:07:56.435 -08 000000103 INF: ===================Camera #0 Frame #231===================
17-02-28 20:07:56.473 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:07:56.473 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:07:56.473 -08 000000100 INF: ===================Camera #2 Frame #232===================
17-02-28 20:07:56.507 -08 000000096 INF: Y Motor: Unshifted Position: 1837298
17-02-28 20:07:56.557 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:56.605 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:07:56.605 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:07:56.605 -08 000000103 INF: ===================Camera #0 Frame #237===================
17-02-28 20:07:56.644 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:07:56.644 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:07:56.644 -08 000000100 INF: ===================Camera #2 Frame #239===================
17-02-28 20:07:56.684 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:56.775 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:07:56.775 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:07:56.775 -08 000000103 INF: ===================Camera #0 Frame #243===================
17-02-28 20:07:56.818 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:07:56.818 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:07:56.818 -08 000000100 INF: ===================Camera #2 Frame #245===================
17-02-28 20:07:56.820 -08 000000096 INF: Y Motor: Unshifted Position: 1633626
17-02-28 20:07:56.870 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:56.945 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:07:56.945 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:07:56.945 -08 000000103 INF: ===================Camera #0 Frame #250===================
17-02-28 20:07:56.988 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:07:56.988 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:07:56.988 -08 000000100 INF: ===================Camera #2 Frame #251===================
17-02-28 20:07:56.994 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:57.118 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:07:57.118 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:07:57.118 -08 000000103 INF: ===================Camera #0 Frame #256===================
17-02-28 20:07:57.134 -08 000000096 INF: Y Motor: Unshifted Position: 1429523
17-02-28 20:07:57.159 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:07:57.159 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:07:57.159 -08 000000100 INF: ===================Camera #2 Frame #258===================
17-02-28 20:07:57.184 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:57.287 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:07:57.287 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:07:57.287 -08 000000103 INF: ===================Camera #0 Frame #262===================
17-02-28 20:07:57.308 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:57.333 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:07:57.333 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:07:57.333 -08 000000100 INF: ===================Camera #2 Frame #264===================
17-02-28 20:07:57.443 -08 000000096 INF: Y Motor: Unshifted Position: 1226498
17-02-28 20:07:57.457 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:07:57.457 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:07:57.457 -08 000000103 INF: ===================Camera #0 Frame #269===================
17-02-28 20:07:57.493 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:57.504 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:07:57.504 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:07:57.504 -08 000000100 INF: ===================Camera #2 Frame #270===================
17-02-28 20:07:57.568 -08 000000058 INF: FPGA: Recv TDIYWAIT
17-02-28 20:07:57.568 -08 000000036 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:57.570 -08 000000036 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:07:57.571 -08 000000080 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:07:57.571 -08 000000080 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:07:57.571 -08 000000080 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:07:57.571 -08 000000080 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:07:57.571 -08 000000080 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:07:57.571 -08 000000033 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:07:57.571 -08 000000033 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:07:57.571 -08 000000033 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:07:57.571 -08 000000033 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:07:57.572 -08 000000033 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:07:57.620 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:57.630 -08 000000103 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:07:57.630 -08 000000103 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:07:57.630 -08 000000103 INF: ===================Camera #0 Frame #272===================
17-02-28 20:07:57.640 -08 000000103 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:07:57.641 -08 000000103 INF: ===================CameraTDI Cleanup===================
17-02-28 20:07:57.756 -08 000000096 INF: Y Motor: Unshifted Position: 1024784
17-02-28 20:07:57.806 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:57.809 -08 000000103 INF: Camera #0 ReleaseBuffer
17-02-28 20:07:57.809 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:07:57.809 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:07:57.809 -08 000000103 INF: ===================Camera TDI===================
17-02-28 20:07:57.809 -08 000000100 INF: ===================Camera #2 Frame #272===================
17-02-28 20:07:57.816 -08 000000100 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:07:57.817 -08 000000100 INF: ===================CameraTDI Cleanup===================
17-02-28 20:07:57.841 -08 000000103 INF: ======================================
17-02-28 20:07:57.940 -08 000000035 INF: FPGA: Recv EX1MV
17-02-28 20:07:57.940 -08 000000080 INF: Excitation Filter 1: Moved 107 steps in 368.8254 ms
17-02-28 20:07:57.940 -08 000000080 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 368.9542 ms
17-02-28 20:07:57.940 -08 000000080 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.0273 ms
17-02-28 20:07:57.940 -08 000000080 INF: ======================================
17-02-28 20:07:57.942 -08 000000096 INF: Y Motor: Unshifted Position: 993132
17-02-28 20:07:57.942 -08 000000096 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:07:57.942 -08 000000096 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:58.006 -08 000000089 INF: FPGA: Recv EX2MV
17-02-28 20:07:58.006 -08 000000033 INF: Excitation Filter 2: Moved 107 steps in 434.4094 ms
17-02-28 20:07:58.006 -08 000000033 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 434.5227 ms
17-02-28 20:07:58.006 -08 000000033 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 434.596 ms
17-02-28 20:07:58.006 -08 000000033 INF: ======================================
17-02-28 20:07:58.008 -08 000000096 INF: Y Motor: Recv v 0\r
17-02-28 20:07:58.008 -08 000000096 INF: Y Motor: Moved to 14.9313 after 7863 ms
17-02-28 20:07:58.008 -08 000000036 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:07:58.008 -08 000000096 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:07:58.009 -08 000000036 INF: ======================================
17-02-28 20:07:58.015 -08 000000100 INF: Camera #2 ReleaseBuffer
17-02-28 20:07:58.015 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:07:58.050 -08 000000100 INF: ======================================
17-02-28 20:07:58.051 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:07:58.052 -08 000000068 INF: ======================================
17-02-28 20:07:58.068 -08 000000096 INF: Y Motor: Recv v 4097\r
17-02-28 20:07:58.068 -08 000000096 INF: Y Motor: Status After move finished OK:
17-02-28 20:07:58.068 -08 000000096 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:58.129 -08 000000096 INF: Y Motor: Recv v 0\r
17-02-28 20:07:58.129 -08 000000096 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:58.129 -08 000000096 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:07:58.194 -08 000000096 INF: Y Motor: Recv v 134217728\r
17-02-28 20:07:58.194 -08 000000096 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:07:58.194 -08 000000096 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:07:58.194 -08 000000096 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:07:58.256 -08 000000096 INF: Y Motor: Recv v 0\r
17-02-28 20:07:58.256 -08 000000096 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:07:58.256 -08 000000096 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:07:58.256 -08 000000096 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:58.320 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:07:58.320 -08 000000096 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:07:58.320 -08 000000096 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:58.380 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:07:58.380 -08 000000096 INF: ======================================
17-02-28 20:07:58.381 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:07:58.382 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:07:58.383 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:58.383 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:07:58.439 -08 000000033 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:07:58.439 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:07:58.504 -08 000000035 INF: FPGA: Recv TDIYERD 1493133
17-02-28 20:07:58.504 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:07:58.568 -08 000000064 INF: FPGA: Recv ZADCR 20774
17-02-28 20:07:58.569 -08 000000042 INF: At scan end Y pos = 14.931 and Z pos = -0.080. Y moved -48.539 mm
17-02-28 20:07:58.569 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:07:58.628 -08 000000080 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:07:58.628 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:07:58.628 -08 000000042 INF: TDIScan finished after 11708.5783 ms
17-02-28 20:07:58.628 -08 000000042 INF: Image[0]: Y should trigger at 63.470 mm, 2nd row was at 64.379 mm (error = 0.909 mm)
17-02-28 20:07:58.628 -08 000000042 INF: Image[2]: Y should trigger at 63.470 mm, 2nd row was at 64.379 mm (error = 0.909 mm)
17-02-28 20:07:58.630 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:58.662 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.559 um
17-02-28 20:07:58.662 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:58.663 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:07:58.690 -08 000000065 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:07:58.690 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:58.691 -08 000000045 INF: ===================Dither Clean Up Command===================
17-02-28 20:07:58.691 -08 000000039 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:07:58.691 -08 000000094 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:07:58.691 -08 000000064 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:07:58.691 -08 000000094 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:07:58.691 -08 000000094 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:07:58.692 -08 000000064 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:07:58.692 -08 000000064 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:07:58.692 -08 000000092 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:07:58.692 -08 000000039 INF: ======================================
17-02-28 20:07:58.692 -08 000000070 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:07:58.692 -08 000000070 INF: ======================================
17-02-28 20:07:58.693 -08 000000092 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:07:58.752 -08 000000050 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:58.752 -08 000000050 INF: FPGA: Recv ZSEL 
17-02-28 20:07:58.752 -08 000000092 INF: FPGA: Xmit ZDACW 27349\n
17-02-28 20:07:58.752 -08 000000064 INF: ======================================
17-02-28 20:07:58.754 -08 000000094 INF: Y Motor: Recv ok\r
17-02-28 20:07:58.754 -08 000000094 INF: ======================================
17-02-28 20:07:58.815 -08 000000097 INF: FPGA: Recv ZDACW 
17-02-28 20:07:58.815 -08 000000092 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:07:58.815 -08 000000092 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:07:58.876 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:07:58.876 -08 000000092 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:07:58.877 -08 000000092 INF: ======================================
17-02-28 20:07:58.878 -08 000000045 INF: ======================================
17-02-28 20:07:58.879 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:58.880 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:07:58.880 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:58.880 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:07:58.880 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:58.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:07:58.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:58.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:07:58.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:58.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827===================
17-02-28 20:07:58.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827===================
17-02-28 20:07:58.882 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:07:58.882 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:07:58.882 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:07:58.882 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827===================
17-02-28 20:07:58.905 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:07:58.905 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:07:58.906 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827===================
17-02-28 20:07:58.906 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:58.906 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827===================
17-02-28 20:07:58.906 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:07:58.906 -08 000000042 INF: Transformed XStagePosition from 69.73618 mm to 69.7054781671613 mm.
17-02-28 20:07:58.938 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5786228015213 mm.
17-02-28 20:07:58.939 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3786228015213 mm.
17-02-28 20:07:58.939 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4693728015213 mm.
17-02-28 20:07:58.944 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:58.944 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:07:58.945 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:07:58.945 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -104.3 um, section = A_1
17-02-28 20:07:58.947 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:58.949 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:07:58.978 -08 000000045 INF: ===================MoveEmissionFilters===================
17-02-28 20:07:58.983 -08 000000067 INF: ===================Move X,Y===================
17-02-28 20:07:58.984 -08 000000067 INF: ===================Move X,Y, Parallel===================
17-02-28 20:07:58.985 -08 000000073 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:07:58.985 -08 000000073 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:07:58.986 -08 000000040 INF: ===================Move X Motor without settling===================
17-02-28 20:07:58.986 -08 000000040 INF: X Motor: Xmit PR VM\n
17-02-28 20:07:58.986 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:07:58.987 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:07:58.987 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:07:58.988 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:07:58.988 -08 000000077 INF: ===================Move Y Motor without settling===================
17-02-28 20:07:58.989 -08 000000077 INF: Y Motor: Moving to 64.5786 mm @25.000 mm/sec, started at 14.9313 mm
17-02-28 20:07:58.989 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:07:58.989 -08 000000009 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:07:58.989 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:07:58.989 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:07:58.989 -08 000000033 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:07:58.989 -08 000000009 INF: ======================================
17-02-28 20:07:58.990 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:07:58.990 -08 000000033 INF: ======================================
17-02-28 20:07:58.990 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2113 Request: {"Cycle":2,"Lane":1,"Tile":2113,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF273","HCSMMF219","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:58.991 -08 000000091 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:07:58.991 -08 000000091 INF: ======================================
17-02-28 20:07:58.991 -08 000000009 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:07:58.992 -08 000000051 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:07:58.992 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:07:58.992 -08 000000033 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:07:58.992 -08 000000009 INF: ======================================
17-02-28 20:07:58.992 -08 000000072 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:07:58.993 -08 000000051 INF: ======================================
17-02-28 20:07:58.993 -08 000000033 INF: ======================================
17-02-28 20:07:58.994 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:07:58.994 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:07:58.994 -08 000000072 INF: ======================================
17-02-28 20:07:58.994 -08 000000037 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:07:58.995 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:07:58.995 -08 000000076 INF: ======================================
17-02-28 20:07:58.997 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:07:58.998 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:07:58.999 -08 000000059 INF: ======================================
17-02-28 20:07:59.003 -08 000000052 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:07:59.004 -08 000000052 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:07:59.004 -08 000000052 INF: ======================================
17-02-28 20:07:59.009 -08 000000059 INF: ===================TDI Scan Setup===================
17-02-28 20:07:59.009 -08 000000073 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:07:59.010 -08 000000059 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:59.010 -08 000000073 INF: ======================================
17-02-28 20:07:59.010 -08 000000059 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:07:59.011 -08 000000059 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:07:59.011 -08 000000059 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:07:59.023 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:07:59.025 -08 000000073 INF: ===================Camera Arm TDI===================
17-02-28 20:07:59.026 -08 000000047 INF: ======================================
17-02-28 20:07:59.027 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:07:59.027 -08 000000073 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:07:59.028 -08 000000045 INF: ======================================
17-02-28 20:07:59.080 -08 000000031 INF: FPGA: Recv ZSEL 
17-02-28 20:07:59.082 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:07:59.082 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:07:59.082 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:07:59.082 -08 000000040 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:07:59.082 -08 000000040 INF: X Motor: Xmit PR VI\n
17-02-28 20:07:59.082 -08 000000059 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:07:59.083 -08 000000059 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:07:59.100 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2110 Request: {"Cycle":2,"Lane":1,"Tile":2110,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF218","HCSMMF262","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.114 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2106 Request: {"Cycle":2,"Lane":1,"Tile":2106,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF220","HCSMMF244","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.121 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2101 Request: {"Cycle":2,"Lane":1,"Tile":2101,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF184","HCSMMF198","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.124 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2109 Request: {"Cycle":2,"Lane":1,"Tile":2109,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF260","HCSMMF232","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.125 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2103 Request: {"Cycle":2,"Lane":1,"Tile":2103,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF192","HCSMMF265","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.125 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2104 Request: {"Cycle":2,"Lane":1,"Tile":2104,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF278","HCSMMF230","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.126 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2120 Request: {"Cycle":2,"Lane":1,"Tile":2120,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF282","HCSMMF183","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.127 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2107 Request: {"Cycle":2,"Lane":1,"Tile":2107,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF268","HCSMMF259","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.127 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2119 Request: {"Cycle":2,"Lane":1,"Tile":2119,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF201","HCSMMF246","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.128 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2102 Request: {"Cycle":2,"Lane":1,"Tile":2102,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF242","HCSMMF258","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.128 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2105 Request: {"Cycle":2,"Lane":1,"Tile":2105,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF215","HCSMMF233","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.129 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2112 Request: {"Cycle":2,"Lane":1,"Tile":2112,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF214","HCSMMF277","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.130 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2108 Request: {"Cycle":2,"Lane":1,"Tile":2108,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF231","HCSMMF208","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.131 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2117 Request: {"Cycle":2,"Lane":1,"Tile":2117,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF250","HCSMMF200","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.131 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2111 Request: {"Cycle":2,"Lane":1,"Tile":2111,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF267","HCSMMF216","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.132 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2118 Request: {"Cycle":2,"Lane":1,"Tile":2118,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF181","HCSMMF283","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.133 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2124 Request: {"Cycle":2,"Lane":1,"Tile":2124,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF202","HCSMMF196","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.133 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2116 Request: {"Cycle":2,"Lane":1,"Tile":2116,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF229","HCSMMF256","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.134 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2114 Request: {"Cycle":2,"Lane":1,"Tile":2114,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF243","HCSMMF257","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.135 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2115 Request: {"Cycle":2,"Lane":1,"Tile":2115,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF253","HCSMMF212","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.136 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2122 Request: {"Cycle":2,"Lane":1,"Tile":2122,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF237","HCSMMF274","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.136 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2126 Request: {"Cycle":2,"Lane":1,"Tile":2126,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF281","HCSMMF197","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.137 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2125 Request: {"Cycle":2,"Lane":1,"Tile":2125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF269","HCSMMF182","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.138 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2121 Request: {"Cycle":2,"Lane":1,"Tile":2121,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF275","HCSMMF176","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.139 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2128 Request: {"Cycle":2,"Lane":1,"Tile":2128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF241","HCSMMF271","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.140 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2123 Request: {"Cycle":2,"Lane":1,"Tile":2123,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF248","HCSMMF207","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.142 -08 000000103 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2127 Request: {"Cycle":2,"Lane":1,"Tile":2127,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF255","HCSMMF209","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:07:59.142 -08 000000081 INF: FPGA: Recv TDIBB
17-02-28 20:07:59.142 -08 000000059 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:07:59.143 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:59.144 -08 000000059 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:07:59.144 -08 000000040 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:07:59.144 -08 000000040 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:07:59.144 -08 000000040 INF: X Motor: Moving to 69.7055 mm @15.000 mm/sec, started at 68.6069 mm
17-02-28 20:07:59.144 -08 000000059 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:59.144 -08 000000040 INF: X Motor: Xmit MA 4385\n
17-02-28 20:07:59.144 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:07:59.144 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:07:59.145 -08 000000059 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:07:59.146 -08 000000059 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:07:59.146 -08 000000059 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:07:59.149 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:07:59.204 -08 000000074 INF: FPGA: Recv ZSTEP 
17-02-28 20:07:59.204 -08 000000059 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:59.206 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:07:59.206 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:07:59.206 -08 000000040 INF: X Motor: Recv MA 4385\r\n>
17-02-28 20:07:59.206 -08 000000077 INF: Y Motor: Set target position to 5957862 encoder counts
17-02-28 20:07:59.206 -08 000000077 INF: Y Motor: Xmit s r0xca 5957862\r
17-02-28 20:07:59.206 -08 000000059 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:07:59.206 -08 000000040 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:07:59.207 -08 000000059 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:59.208 -08 000000059 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:07:59.208 -08 000000059 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:07:59.208 -08 000000059 INF: Z Motor: Arming to move to -0.0643 mm
17-02-28 20:07:59.208 -08 000000059 INF: FPGA: Xmit ZYT 6437862 4\n
17-02-28 20:07:59.230 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:59.230 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:07:59.266 -08 000000047 INF: FPGA: Recv ZYT 
17-02-28 20:07:59.266 -08 000000059 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1493132 enc / 14.931 mm / ) = 6437862 enc / 64.379 mm
17-02-28 20:07:59.266 -08 000000059 INF: FPGA: Xmit ZARM 16864\n
17-02-28 20:07:59.268 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:07:59.268 -08 000000077 INF: Y Motor: Start the move command
17-02-28 20:07:59.268 -08 000000077 INF: Y Motor: Xmit t 1\r
17-02-28 20:07:59.268 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:59.274 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:07:59.328 -08 000000010 INF: FPGA: Recv ZARM
17-02-28 20:07:59.328 -08 000000059 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9637 ms
17-02-28 20:07:59.328 -08 000000059 INF: Z Motor: ArmAbsStepped took 119.5261 ms
17-02-28 20:07:59.328 -08 000000059 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:07:59.330 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:07:59.330 -08 000000059 INF: ===================TDI Scan Setup===================
17-02-28 20:07:59.330 -08 000000077 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:07:59.330 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:59.331 -08 000000059 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:07:59.332 -08 000000059 INF: ===================TDI Scan Setup===================
17-02-28 20:07:59.333 -08 000000059 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:07:59.333 -08 000000059 INF: ===================TDI Scan Setup===================
17-02-28 20:07:59.335 -08 000000059 INF: ======================================
17-02-28 20:07:59.364 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:59.370 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:07:59.457 -08 000000077 INF: Y Motor: Unshifted Position: 1078503
17-02-28 20:07:59.507 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:59.597 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:59.603 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:07:59.619 -08 000000073 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:07:59.619 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:07:59.619 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:07:59.631 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:59.634 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:07:59.636 -08 000000073 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:07:59.715 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:07:59.769 -08 000000077 INF: Y Motor: Unshifted Position: 1783120
17-02-28 20:07:59.819 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:07:59.832 -08 000000040 INF: X Motor: Xmit PR ER\n
17-02-28 20:07:59.896 -08 000000040 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:07:59.896 -08 000000040 INF: X Motor: Moved to 69.7056 after 689 ms
17-02-28 20:07:59.896 -08 000000040 INF: ======================================
17-02-28 20:07:59.944 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:00.023 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:08:00.080 -08 000000077 INF: Y Motor: Unshifted Position: 2565652
17-02-28 20:08:00.130 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:00.254 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:00.255 -08 000000073 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:08:00.255 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:08:00.255 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:08:00.271 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:08:00.273 -08 000000073 INF: ===================Camera Arm TDI===================
17-02-28 20:08:00.275 -08 000000073 INF: ======================================
17-02-28 20:08:00.276 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:08:00.277 -08 000000037 INF: ======================================
17-02-28 20:08:00.393 -08 000000077 INF: Y Motor: Unshifted Position: 3348923
17-02-28 20:08:00.443 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:00.567 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:00.703 -08 000000077 INF: Y Motor: Unshifted Position: 4126499
17-02-28 20:08:00.753 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:00.880 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:01.016 -08 000000077 INF: Y Motor: Unshifted Position: 4907282
17-02-28 20:08:01.066 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:01.190 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:01.329 -08 000000077 INF: Y Motor: Unshifted Position: 5687991
17-02-28 20:08:01.379 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:01.503 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:01.639 -08 000000077 INF: Y Motor: Unshifted Position: 5957865
17-02-28 20:08:01.639 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:08:01.639 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:01.704 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:08:01.704 -08 000000077 INF: Y Motor: Moved to 64.5787 after 2374 ms
17-02-28 20:08:01.704 -08 000000077 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:08:01.766 -08 000000077 INF: Y Motor: Recv v 4096\r
17-02-28 20:08:01.766 -08 000000077 INF: Y Motor: Status After move finished OK:
17-02-28 20:08:01.766 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:01.828 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:08:01.828 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:01.828 -08 000000077 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:08:01.892 -08 000000077 INF: Y Motor: Recv v 402653184\r
17-02-28 20:08:01.892 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:08:01.892 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:08:01.892 -08 000000077 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:08:01.953 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:08:01.953 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:08:01.953 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:08:01.953 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:02.016 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:08:02.016 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:08:02.016 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:02.078 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:08:02.078 -08 000000077 INF: ======================================
17-02-28 20:08:02.079 -08 000000067 INF: ===================Move X,Y===================
17-02-28 20:08:02.080 -08 000000067 INF: ======================================
17-02-28 20:08:02.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:02.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:02.082 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:08:02.082 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:08:02.140 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:08:02.140 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:08:02.201 -08 000000096 INF: FPGA: Recv ZFREQCL
17-02-28 20:08:02.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:08:02.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:02.202 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:08:02.261 -08 000000102 INF: FPGA: Recv TDIYERD 6457864
17-02-28 20:08:02.261 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457864 counts (64.579 mm)
17-02-28 20:08:02.261 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:02.262 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:02.263 -08 000000027 INF: ===================TDI FPGA Arm===================
17-02-28 20:08:02.263 -08 000000089 INF: ===================Set YMotor gains for scans===================
17-02-28 20:08:02.263 -08 000000089 INF: ======================================
17-02-28 20:08:02.263 -08 000000027 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:08:02.264 -08 000000027 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:08:02.264 -08 000000027 INF: FPGA: Xmit TDIYPOS 6346937\n
17-02-28 20:08:02.326 -08 000000040 INF: FPGA: Recv TDIYPOS
17-02-28 20:08:02.326 -08 000000027 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:08:02.328 -08 000000027 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:08:02.328 -08 000000027 INF: FPGA: Xmit TDIYARM3 139264 6437862 1 1\n
17-02-28 20:08:02.388 -08 000000085 INF: FPGA: Recv TDIYARM3
17-02-28 20:08:02.388 -08 000000027 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:08:02.389 -08 000000027 INF: ===================TDI FPGA Arm===================
17-02-28 20:08:02.390 -08 000000027 INF: ======================================
17-02-28 20:08:02.391 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:02.392 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:02.392 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:02.393 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:02.393 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:02.394 -08 000000094 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:08:02.394 -08 000000089 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:08:02.394 -08 000000094 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:08:02.394 -08 000000094 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:08:02.394 -08 000000094 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:08:02.394 -08 000000089 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:08:02.394 -08 000000094 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:08:02.394 -08 000000089 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:08:02.394 -08 000000089 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:08:02.397 -08 000000089 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:08:02.760 -08 000000058 INF: FPGA: Recv EX2MV
17-02-28 20:08:02.760 -08 000000058 INF: FPGA: Recv EX1MV
17-02-28 20:08:02.760 -08 000000089 INF: Excitation Filter 1: Moved -107 steps in 365.6594 ms
17-02-28 20:08:02.760 -08 000000089 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.8213 ms
17-02-28 20:08:02.760 -08 000000089 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.8928 ms
17-02-28 20:08:02.760 -08 000000094 INF: Excitation Filter 2: Moved -107 steps in 365.7962 ms
17-02-28 20:08:02.760 -08 000000094 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.2072 ms
17-02-28 20:08:02.760 -08 000000094 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.2778 ms
17-02-28 20:08:02.761 -08 000000089 INF: ======================================
17-02-28 20:08:02.761 -08 000000094 INF: ======================================
17-02-28 20:08:02.762 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:02.763 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:02.764 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:08:02.764 -08 000000103 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:02.764 -08 000000023 INF: ===================FPGA Z Wait===================
17-02-28 20:08:02.764 -08 000000100 INF: ===================Move Y Motor without settling===================
17-02-28 20:08:02.764 -08 000000023 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:08:02.764 -08 000000100 INF: Y Motor: Moving to 14.9303 mm @6.500 mm/sec, started at 64.5787 mm
17-02-28 20:08:02.764 -08 000000100 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:08:02.764 -08 000000100 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:02.765 -08 000000050 INF: ===================Camera TDI, Parallel===================
17-02-28 20:08:02.765 -08 000000103 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:08:02.765 -08 000000103 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:08:02.765 -08 000000040 INF: ===================Camera TDI===================
17-02-28 20:08:02.765 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:08:02.767 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:02.767 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:02.769 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:02.769 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:02.827 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:08:02.827 -08 000000100 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:08:02.827 -08 000000100 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:02.889 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:08:02.889 -08 000000100 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:02.917 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:02.917 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:02.920 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:02.920 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:02.951 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:08:02.951 -08 000000100 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:02.951 -08 000000100 INF: Y Motor: Set target position to 993029 encoder counts
17-02-28 20:08:02.951 -08 000000100 INF: Y Motor: Xmit s r0xca 993029\r
17-02-28 20:08:03.013 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:08:03.013 -08 000000100 INF: Y Motor: Start the move command
17-02-28 20:08:03.013 -08 000000100 INF: Y Motor: Xmit t 1\r
17-02-28 20:08:03.067 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:03.067 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:03.070 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:03.070 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:03.075 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:08:03.075 -08 000000100 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:08:03.075 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:03.135 -08 000000094 INF: FPGA: Recv ZWAIT 
17-02-28 20:08:03.135 -08 000000023 INF: ======================================
17-02-28 20:08:03.199 -08 000000100 INF: Y Motor: Unshifted Position: 5896232
17-02-28 20:08:03.217 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:08:03.217 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:08:03.217 -08 000000040 INF: ===================Camera #0 Frame #4===================
17-02-28 20:08:03.220 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:08:03.220 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:08:03.220 -08 000000081 INF: ===================Camera #2 Frame #5===================
17-02-28 20:08:03.249 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:03.376 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:03.379 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:08:03.379 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:08:03.379 -08 000000040 INF: ===================Camera #0 Frame #10===================
17-02-28 20:08:03.386 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:08:03.386 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:08:03.386 -08 000000081 INF: ===================Camera #2 Frame #11===================
17-02-28 20:08:03.512 -08 000000100 INF: Y Motor: Unshifted Position: 5692559
17-02-28 20:08:03.547 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:08:03.547 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:08:03.547 -08 000000040 INF: ===================Camera #0 Frame #17===================
17-02-28 20:08:03.555 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:08:03.555 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:08:03.555 -08 000000081 INF: ===================Camera #2 Frame #17===================
17-02-28 20:08:03.562 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:03.686 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:03.719 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:08:03.719 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:08:03.719 -08 000000040 INF: ===================Camera #0 Frame #23===================
17-02-28 20:08:03.725 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:08:03.725 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:08:03.725 -08 000000081 INF: ===================Camera #2 Frame #23===================
17-02-28 20:08:03.825 -08 000000100 INF: Y Motor: Unshifted Position: 5488899
17-02-28 20:08:03.875 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:03.887 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:08:03.887 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:08:03.887 -08 000000040 INF: ===================Camera #0 Frame #29===================
17-02-28 20:08:03.894 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:08:03.894 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:08:03.894 -08 000000081 INF: ===================Camera #2 Frame #29===================
17-02-28 20:08:04.001 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:04.056 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:08:04.056 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:08:04.056 -08 000000040 INF: ===================Camera #0 Frame #35===================
17-02-28 20:08:04.064 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:08:04.064 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:08:04.064 -08 000000081 INF: ===================Camera #2 Frame #36===================
17-02-28 20:08:04.135 -08 000000100 INF: Y Motor: Unshifted Position: 5287397
17-02-28 20:08:04.185 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:04.224 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:08:04.224 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:08:04.224 -08 000000040 INF: ===================Camera #0 Frame #42===================
17-02-28 20:08:04.236 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:08:04.236 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:08:04.236 -08 000000081 INF: ===================Camera #2 Frame #42===================
17-02-28 20:08:04.312 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:04.395 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:08:04.395 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:08:04.395 -08 000000040 INF: ===================Camera #0 Frame #48===================
17-02-28 20:08:04.405 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:08:04.405 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:08:04.405 -08 000000081 INF: ===================Camera #2 Frame #48===================
17-02-28 20:08:04.449 -08 000000100 INF: Y Motor: Unshifted Position: 5083289
17-02-28 20:08:04.499 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:04.565 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:08:04.565 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:08:04.565 -08 000000040 INF: ===================Camera #0 Frame #54===================
17-02-28 20:08:04.576 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:08:04.576 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:08:04.576 -08 000000081 INF: ===================Camera #2 Frame #55===================
17-02-28 20:08:04.625 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:04.734 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:08:04.734 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:08:04.734 -08 000000040 INF: ===================Camera #0 Frame #60===================
17-02-28 20:08:04.750 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:08:04.750 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:08:04.750 -08 000000081 INF: ===================Camera #2 Frame #61===================
17-02-28 20:08:04.759 -08 000000100 INF: Y Motor: Unshifted Position: 4881574
17-02-28 20:08:04.809 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:04.904 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:08:04.904 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:08:04.904 -08 000000040 INF: ===================Camera #0 Frame #67===================
17-02-28 20:08:04.920 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:08:04.920 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:08:04.920 -08 000000081 INF: ===================Camera #2 Frame #67===================
17-02-28 20:08:04.936 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:05.072 -08 000000100 INF: Y Motor: Unshifted Position: 4677908
17-02-28 20:08:05.077 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:08:05.077 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:08:05.077 -08 000000040 INF: ===================Camera #0 Frame #73===================
17-02-28 20:08:05.091 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:08:05.091 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:08:05.091 -08 000000081 INF: ===================Camera #2 Frame #73===================
17-02-28 20:08:05.122 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:05.246 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:05.247 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:08:05.247 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:08:05.247 -08 000000040 INF: ===================Camera #0 Frame #79===================
17-02-28 20:08:05.262 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:08:05.262 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:08:05.262 -08 000000081 INF: ===================Camera #2 Frame #80===================
17-02-28 20:08:05.385 -08 000000100 INF: Y Motor: Unshifted Position: 4474450
17-02-28 20:08:05.417 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:08:05.417 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:08:05.417 -08 000000040 INF: ===================Camera #0 Frame #85===================
17-02-28 20:08:05.435 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:05.437 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:08:05.437 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:08:05.437 -08 000000081 INF: ===================Camera #2 Frame #86===================
17-02-28 20:08:05.559 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:05.587 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:08:05.587 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:08:05.587 -08 000000040 INF: ===================Camera #0 Frame #92===================
17-02-28 20:08:05.608 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:08:05.608 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:08:05.608 -08 000000081 INF: ===================Camera #2 Frame #93===================
17-02-28 20:08:05.695 -08 000000100 INF: Y Motor: Unshifted Position: 4272946
17-02-28 20:08:05.745 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:05.760 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:08:05.760 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:08:05.760 -08 000000040 INF: ===================Camera #0 Frame #98===================
17-02-28 20:08:05.782 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:08:05.782 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:08:05.782 -08 000000081 INF: ===================Camera #2 Frame #99===================
17-02-28 20:08:05.875 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:05.930 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:08:05.930 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:08:05.930 -08 000000040 INF: ===================Camera #0 Frame #104===================
17-02-28 20:08:05.953 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:08:05.953 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:08:05.953 -08 000000081 INF: ===================Camera #2 Frame #105===================
17-02-28 20:08:06.008 -08 000000100 INF: Y Motor: Unshifted Position: 4069278
17-02-28 20:08:06.058 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:06.100 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:08:06.100 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:08:06.100 -08 000000040 INF: ===================Camera #0 Frame #111===================
17-02-28 20:08:06.124 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:08:06.124 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:08:06.124 -08 000000081 INF: ===================Camera #2 Frame #112===================
17-02-28 20:08:06.182 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:06.274 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:08:06.274 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:08:06.274 -08 000000040 INF: ===================Camera #0 Frame #117===================
17-02-28 20:08:06.299 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:08:06.299 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:08:06.299 -08 000000081 INF: ===================Camera #2 Frame #118===================
17-02-28 20:08:06.321 -08 000000100 INF: Y Motor: Unshifted Position: 3865614
17-02-28 20:08:06.371 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:06.444 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:08:06.444 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:08:06.444 -08 000000040 INF: ===================Camera #0 Frame #123===================
17-02-28 20:08:06.470 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:08:06.470 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:08:06.470 -08 000000081 INF: ===================Camera #2 Frame #124===================
17-02-28 20:08:06.495 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:06.614 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:08:06.614 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:08:06.614 -08 000000040 INF: ===================Camera #0 Frame #130===================
17-02-28 20:08:06.634 -08 000000100 INF: Y Motor: Unshifted Position: 3662814
17-02-28 20:08:06.641 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:08:06.641 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:08:06.641 -08 000000081 INF: ===================Camera #2 Frame #131===================
17-02-28 20:08:06.684 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:06.787 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:08:06.787 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:08:06.787 -08 000000040 INF: ===================Camera #0 Frame #136===================
17-02-28 20:08:06.808 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:06.815 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:08:06.815 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:08:06.815 -08 000000081 INF: ===================Camera #2 Frame #137===================
17-02-28 20:08:06.944 -08 000000100 INF: Y Motor: Unshifted Position: 3461317
17-02-28 20:08:06.957 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:08:06.957 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:08:06.957 -08 000000040 INF: ===================Camera #0 Frame #142===================
17-02-28 20:08:06.986 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:08:06.986 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:08:06.986 -08 000000081 INF: ===================Camera #2 Frame #143===================
17-02-28 20:08:06.994 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:07.121 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:07.127 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:08:07.127 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:08:07.127 -08 000000040 INF: ===================Camera #0 Frame #148===================
17-02-28 20:08:07.157 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:08:07.157 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:08:07.157 -08 000000081 INF: ===================Camera #2 Frame #150===================
17-02-28 20:08:07.257 -08 000000100 INF: Y Motor: Unshifted Position: 3257648
17-02-28 20:08:07.297 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:08:07.297 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:08:07.297 -08 000000040 INF: ===================Camera #0 Frame #155===================
17-02-28 20:08:07.307 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:07.331 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:08:07.331 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:08:07.331 -08 000000081 INF: ===================Camera #2 Frame #156===================
17-02-28 20:08:07.431 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:07.470 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:08:07.470 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:08:07.470 -08 000000040 INF: ===================Camera #0 Frame #161===================
17-02-28 20:08:07.502 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:08:07.502 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:08:07.502 -08 000000081 INF: ===================Camera #2 Frame #162===================
17-02-28 20:08:07.570 -08 000000100 INF: Y Motor: Unshifted Position: 3055934
17-02-28 20:08:07.620 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:07.640 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:08:07.640 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:08:07.640 -08 000000040 INF: ===================Camera #0 Frame #167===================
17-02-28 20:08:07.673 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:08:07.673 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:08:07.673 -08 000000081 INF: ===================Camera #2 Frame #169===================
17-02-28 20:08:07.744 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:07.810 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:08:07.810 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:08:07.810 -08 000000040 INF: ===================Camera #0 Frame #174===================
17-02-28 20:08:07.847 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:08:07.847 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:08:07.847 -08 000000081 INF: ===================Camera #2 Frame #175===================
17-02-28 20:08:07.880 -08 000000100 INF: Y Motor: Unshifted Position: 2852492
17-02-28 20:08:07.930 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:07.983 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:08:07.983 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:08:07.983 -08 000000040 INF: ===================Camera #0 Frame #180===================
17-02-28 20:08:08.018 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:08:08.018 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:08:08.019 -08 000000081 INF: ===================Camera #2 Frame #181===================
17-02-28 20:08:08.057 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:08.153 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:08:08.153 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:08:08.153 -08 000000040 INF: ===================Camera #0 Frame #186===================
17-02-28 20:08:08.190 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:08:08.190 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:08:08.190 -08 000000081 INF: ===================Camera #2 Frame #188===================
17-02-28 20:08:08.193 -08 000000100 INF: Y Motor: Unshifted Position: 2648821
17-02-28 20:08:08.243 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:08.323 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:08:08.323 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:08:08.323 -08 000000040 INF: ===================Camera #0 Frame #192===================
17-02-28 20:08:08.364 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:08:08.364 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:08:08.364 -08 000000081 INF: ===================Camera #2 Frame #194===================
17-02-28 20:08:08.367 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:08.493 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:08:08.493 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:08:08.493 -08 000000040 INF: ===================Camera #0 Frame #199===================
17-02-28 20:08:08.506 -08 000000100 INF: Y Motor: Unshifted Position: 2447330
17-02-28 20:08:08.535 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:08:08.535 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:08:08.535 -08 000000081 INF: ===================Camera #2 Frame #200===================
17-02-28 20:08:08.556 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:08.665 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:08:08.665 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:08:08.665 -08 000000040 INF: ===================Camera #0 Frame #205===================
17-02-28 20:08:08.682 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:08.706 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:08:08.706 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:08:08.706 -08 000000081 INF: ===================Camera #2 Frame #207===================
17-02-28 20:08:08.816 -08 000000100 INF: Y Motor: Unshifted Position: 2243662
17-02-28 20:08:08.835 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:08:08.835 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:08:08.835 -08 000000040 INF: ===================Camera #0 Frame #211===================
17-02-28 20:08:08.878 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:08.880 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:08:08.880 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:08:08.881 -08 000000081 INF: ===================Camera #2 Frame #213===================
17-02-28 20:08:08.992 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:09.005 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:08:09.005 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:08:09.005 -08 000000040 INF: ===================Camera #0 Frame #218===================
17-02-28 20:08:09.052 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:08:09.052 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:08:09.053 -08 000000081 INF: ===================Camera #2 Frame #219===================
17-02-28 20:08:09.128 -08 000000100 INF: Y Motor: Unshifted Position: 2040861
17-02-28 20:08:09.178 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:09.179 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:08:09.179 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:08:09.179 -08 000000040 INF: ===================Camera #0 Frame #224===================
17-02-28 20:08:09.223 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:08:09.223 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:08:09.223 -08 000000081 INF: ===================Camera #2 Frame #226===================
17-02-28 20:08:09.305 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:09.349 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:08:09.349 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:08:09.349 -08 000000040 INF: ===================Camera #0 Frame #230===================
17-02-28 20:08:09.397 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:08:09.397 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:08:09.397 -08 000000081 INF: ===================Camera #2 Frame #232===================
17-02-28 20:08:09.442 -08 000000100 INF: Y Motor: Unshifted Position: 1838496
17-02-28 20:08:09.492 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:09.519 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:08:09.519 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:08:09.519 -08 000000040 INF: ===================Camera #0 Frame #236===================
17-02-28 20:08:09.568 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:08:09.568 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:08:09.568 -08 000000081 INF: ===================Camera #2 Frame #238===================
17-02-28 20:08:09.616 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:09.689 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:08:09.689 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:08:09.689 -08 000000040 INF: ===================Camera #0 Frame #243===================
17-02-28 20:08:09.739 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:08:09.739 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:08:09.739 -08 000000081 INF: ===================Camera #2 Frame #245===================
17-02-28 20:08:09.752 -08 000000100 INF: Y Motor: Unshifted Position: 1635046
17-02-28 20:08:09.802 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:09.861 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:08:09.861 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:08:09.861 -08 000000040 INF: ===================Camera #0 Frame #249===================
17-02-28 20:08:09.913 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:08:09.913 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:08:09.913 -08 000000081 INF: ===================Camera #2 Frame #251===================
17-02-28 20:08:09.929 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:10.031 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:08:10.031 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:08:10.031 -08 000000040 INF: ===================Camera #0 Frame #255===================
17-02-28 20:08:10.066 -08 000000100 INF: Y Motor: Unshifted Position: 1431374
17-02-28 20:08:10.084 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:08:10.084 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:08:10.084 -08 000000081 INF: ===================Camera #2 Frame #257===================
17-02-28 20:08:10.116 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:10.201 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:08:10.201 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:08:10.201 -08 000000040 INF: ===================Camera #0 Frame #262===================
17-02-28 20:08:10.239 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:10.255 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:08:10.255 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:08:10.255 -08 000000081 INF: ===================Camera #2 Frame #264===================
17-02-28 20:08:10.374 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:08:10.374 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:08:10.374 -08 000000040 INF: ===================Camera #0 Frame #268===================
17-02-28 20:08:10.376 -08 000000100 INF: Y Motor: Unshifted Position: 1225092
17-02-28 20:08:10.426 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:10.429 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:08:10.429 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:08:10.429 -08 000000081 INF: ===================Camera #2 Frame #270===================
17-02-28 20:08:10.501 -08 000000035 INF: FPGA: Recv TDIYWAIT
17-02-28 20:08:10.501 -08 000000103 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:10.503 -08 000000103 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:08:10.504 -08 000000059 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:08:10.504 -08 000000020 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:08:10.504 -08 000000059 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:08:10.504 -08 000000059 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:08:10.504 -08 000000059 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:08:10.504 -08 000000020 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:08:10.504 -08 000000020 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:08:10.504 -08 000000020 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:08:10.504 -08 000000059 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:08:10.505 -08 000000020 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:08:10.543 -08 000000040 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:08:10.543 -08 000000040 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:08:10.543 -08 000000040 INF: ===================Camera #0 Frame #272===================
17-02-28 20:08:10.553 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:10.556 -08 000000040 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:08:10.557 -08 000000040 INF: ===================CameraTDI Cleanup===================
17-02-28 20:08:10.689 -08 000000100 INF: Y Motor: Unshifted Position: 1025550
17-02-28 20:08:10.690 -08 000000040 INF: Camera #0 ReleaseBuffer
17-02-28 20:08:10.690 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:08:10.690 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:08:10.690 -08 000000081 INF: ===================Camera #2 Frame #272===================
17-02-28 20:08:10.690 -08 000000040 INF: ===================Camera TDI===================
17-02-28 20:08:10.696 -08 000000081 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:08:10.697 -08 000000081 INF: ===================CameraTDI Cleanup===================
17-02-28 20:08:10.721 -08 000000040 INF: ======================================
17-02-28 20:08:10.739 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:10.864 -08 000000081 INF: Camera #2 ReleaseBuffer
17-02-28 20:08:10.864 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:08:10.873 -08 000000058 INF: FPGA: Recv EX1MV
17-02-28 20:08:10.873 -08 000000058 INF: FPGA: Recv EX2MV
17-02-28 20:08:10.873 -08 000000020 INF: Excitation Filter 2: Moved 107 steps in 368.8072 ms
17-02-28 20:08:10.873 -08 000000059 INF: Excitation Filter 1: Moved 107 steps in 368.9774 ms
17-02-28 20:08:10.873 -08 000000020 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 368.9117 ms
17-02-28 20:08:10.873 -08 000000020 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.0831 ms
17-02-28 20:08:10.873 -08 000000059 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.1284 ms
17-02-28 20:08:10.873 -08 000000059 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.2991 ms
17-02-28 20:08:10.873 -08 000000020 INF: ======================================
17-02-28 20:08:10.873 -08 000000059 INF: ======================================
17-02-28 20:08:10.875 -08 000000100 INF: Y Motor: Unshifted Position: 993030
17-02-28 20:08:10.875 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:08:10.875 -08 000000100 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:10.875 -08 000000103 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:10.876 -08 000000103 INF: ======================================
17-02-28 20:08:10.898 -08 000000081 INF: ======================================
17-02-28 20:08:10.899 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:08:10.900 -08 000000050 INF: ======================================
17-02-28 20:08:10.937 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:08:10.937 -08 000000100 INF: Y Motor: Moved to 14.9303 after 7861 ms
17-02-28 20:08:10.937 -08 000000100 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:08:11.002 -08 000000100 INF: Y Motor: Recv v 4097\r
17-02-28 20:08:11.002 -08 000000100 INF: Y Motor: Status After move finished OK:
17-02-28 20:08:11.002 -08 000000100 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:11.064 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:08:11.064 -08 000000100 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:11.064 -08 000000100 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:08:11.126 -08 000000100 INF: Y Motor: Recv v 134217728\r
17-02-28 20:08:11.126 -08 000000100 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:08:11.126 -08 000000100 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:08:11.126 -08 000000100 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:08:11.188 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:08:11.188 -08 000000100 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:08:11.188 -08 000000100 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:08:11.188 -08 000000100 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:11.250 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:08:11.250 -08 000000100 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:08:11.250 -08 000000100 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:11.312 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:08:11.312 -08 000000100 INF: ======================================
17-02-28 20:08:11.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:11.314 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:11.315 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:11.315 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:08:11.372 -08 000000104 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:08:11.372 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:08:11.434 -08 000000085 INF: FPGA: Recv TDIYERD 1493029
17-02-28 20:08:11.434 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:08:11.500 -08 000000051 INF: FPGA: Recv ZADCR 20510
17-02-28 20:08:11.500 -08 000000042 INF: At scan end Y pos = 14.930 and Z pos = -0.079. Y moved -48.539 mm
17-02-28 20:08:11.500 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:08:11.561 -08 000000039 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:08:11.562 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:08:11.562 -08 000000042 INF: TDIScan finished after 12654.8947 ms
17-02-28 20:08:11.562 -08 000000042 INF: Image[0]: Y should trigger at 63.469 mm, 2nd row was at 64.378 mm (error = 0.909 mm)
17-02-28 20:08:11.562 -08 000000042 INF: Image[2]: Y should trigger at 63.469 mm, 2nd row was at 64.378 mm (error = 0.909 mm)
17-02-28 20:08:11.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:11.598 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.601 um
17-02-28 20:08:11.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:11.599 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:08:11.626 -08 000000035 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:08:11.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:11.628 -08 000000080 INF: ===================Dither Clean Up Command===================
17-02-28 20:08:11.628 -08 000000020 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:08:11.628 -08 000000051 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:08:11.628 -08 000000065 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:08:11.628 -08 000000065 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:08:11.628 -08 000000065 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:08:11.628 -08 000000051 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:08:11.628 -08 000000051 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:08:11.629 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:08:11.629 -08 000000020 INF: ======================================
17-02-28 20:08:11.629 -08 000000036 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:08:11.629 -08 000000036 INF: ======================================
17-02-28 20:08:11.635 -08 000000073 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:08:11.686 -08 000000063 INF: FPGA: Recv ZSTEP 
17-02-28 20:08:11.686 -08 000000063 INF: FPGA: Recv ZSEL 
17-02-28 20:08:11.686 -08 000000073 INF: FPGA: Xmit ZDACW 27349\n
17-02-28 20:08:11.686 -08 000000065 INF: ======================================
17-02-28 20:08:11.688 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:08:11.688 -08 000000051 INF: ======================================
17-02-28 20:08:11.748 -08 000000052 INF: FPGA: Recv ZDACW 
17-02-28 20:08:11.748 -08 000000073 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:08:11.748 -08 000000073 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:08:11.810 -08 000000102 INF: FPGA: Recv TDIBB
17-02-28 20:08:11.810 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:08:11.811 -08 000000073 INF: ======================================
17-02-28 20:08:11.812 -08 000000080 INF: ======================================
17-02-28 20:08:11.813 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:11.814 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:08:11.814 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:11.814 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:08:11.814 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:11.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:08:11.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:11.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:08:11.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:11.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827===================
17-02-28 20:08:11.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827===================
17-02-28 20:08:11.816 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:08:11.816 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:08:11.816 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:08:11.816 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827===================
17-02-28 20:08:11.839 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:08:11.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:08:11.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:08:11.840 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:11.840 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:08:11.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:08:11.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface===================
17-02-28 20:08:11.890 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:11.891 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:11.891 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:08:11.891 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:08:11.950 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2204 Request: {"Cycle":2,"Lane":1,"Tile":2204,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF183","HCSMMF200","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:11.959 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:08:11.960 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:11.960 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:08:11.961 -08 000000042 INF: Lane 2, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:08:11.962 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:11.963 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:11.965 -08 000000092 INF: ===================Move Tilt Motor 1===================
17-02-28 20:08:11.965 -08 000000057 INF: ===================Move Tilt Motor 2===================
17-02-28 20:08:11.965 -08 000000092 INF: Tilt Motor 1: Moving to 5.0005 mm, started at 5.0231 mm, delta = -0.0226 mm
17-02-28 20:08:11.965 -08 000000092 INF: FPGA: Xmit T1RD\n
17-02-28 20:08:11.965 -08 000000057 INF: Tilt Motor 2: Moving to 5.3939 mm, started at 5.3558 mm, delta = 0.0381 mm
17-02-28 20:08:11.968 -08 000000057 INF: FPGA: Xmit T2RD\n
17-02-28 20:08:11.969 -08 000000020 INF: ===================Move Tilt Motor 3===================
17-02-28 20:08:11.969 -08 000000020 INF: Tilt Motor 3: Moving to 5.3391 mm, started at 5.3028 mm, delta = 0.0363 mm
17-02-28 20:08:11.970 -08 000000020 INF: FPGA: Xmit T3RD\n
17-02-28 20:08:12.047 -08 000000069 INF: FPGA: Recv T1RD 19776
17-02-28 20:08:12.047 -08 000000069 INF: FPGA: Recv T2RD 21086
17-02-28 20:08:12.047 -08 000000069 INF: FPGA: Recv T3RD 20876
17-02-28 20:08:12.066 -08 000000020 INF: Tilt Motor 3: Encoder: at motor step 3479 + 2/6
17-02-28 20:08:12.066 -08 000000020 INF: Tilt Motor 3: Moving to 21020 encoder counts
17-02-28 20:08:12.066 -08 000000020 INF: FPGA: Xmit T3MOVETO 21020\n
17-02-28 20:08:12.075 -08 000000057 INF: Tilt Motor 2: Encoder: at motor step 3514 + 2/6
17-02-28 20:08:12.075 -08 000000057 INF: Tilt Motor 2: Moving to 21236 encoder counts
17-02-28 20:08:12.078 -08 000000092 INF: Tilt Motor 1: Encoder: at motor step 3296 + 0/6
17-02-28 20:08:12.078 -08 000000092 INF: Tilt Motor 1: Moving to 19687 encoder counts
17-02-28 20:08:12.080 -08 000000057 INF: FPGA: Xmit T2MOVETO 21236\n
17-02-28 20:08:12.081 -08 000000092 INF: FPGA: Xmit T1MOVETO 19687\n
17-02-28 20:08:12.119 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2202 Request: {"Cycle":2,"Lane":1,"Tile":2202,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF271","HCSMMF275","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.120 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2201 Request: {"Cycle":2,"Lane":1,"Tile":2201,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF241","HCSMMF276","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.121 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2206 Request: {"Cycle":2,"Lane":1,"Tile":2206,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF239","HCSMMF199","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.122 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2214 Request: {"Cycle":2,"Lane":1,"Tile":2214,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF218","HCSMMF191","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.123 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2215 Request: {"Cycle":2,"Lane":1,"Tile":2215,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF240","HCSMMF256","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.124 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2212 Request: {"Cycle":2,"Lane":1,"Tile":2212,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF254","HCSMMF195","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.125 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2217 Request: {"Cycle":2,"Lane":1,"Tile":2217,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF216","HCSMMF234","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.126 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2211 Request: {"Cycle":2,"Lane":1,"Tile":2211,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF217","HCSMMF277","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.127 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2209 Request: {"Cycle":2,"Lane":1,"Tile":2209,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF210","HCSMMF206","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.128 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2203 Request: {"Cycle":2,"Lane":1,"Tile":2203,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF248","HCSMMF224","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.128 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2207 Request: {"Cycle":2,"Lane":1,"Tile":2207,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF180","HCSMMF279","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.129 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2205 Request: {"Cycle":2,"Lane":1,"Tile":2205,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF223","HCSMMF286","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.130 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2222 Request: {"Cycle":2,"Lane":1,"Tile":2222,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF246","HCSMMF178","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.131 -08 000000103 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2208 Request: {"Cycle":2,"Lane":1,"Tile":2208,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF212","HCSMMF189","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.131 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2213 Request: {"Cycle":2,"Lane":1,"Tile":2213,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF265","HCSMMF228","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.132 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2210 Request: {"Cycle":2,"Lane":1,"Tile":2210,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF278","HCSMMF230","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.133 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2224 Request: {"Cycle":2,"Lane":1,"Tile":2224,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF244","HCSMMF251","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.133 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2218 Request: {"Cycle":2,"Lane":1,"Tile":2218,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF229","HCSMMF264","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.134 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2216 Request: {"Cycle":2,"Lane":1,"Tile":2216,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF205","HCSMMF258","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.135 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2221 Request: {"Cycle":2,"Lane":1,"Tile":2221,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF233","HCSMMF272","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.135 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2220 Request: {"Cycle":2,"Lane":1,"Tile":2220,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF245","HCSMMF222","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.136 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2219 Request: {"Cycle":2,"Lane":1,"Tile":2219,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF242","HCSMMF225","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.137 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2226 Request: {"Cycle":2,"Lane":1,"Tile":2226,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF231","HCSMMF196","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.138 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2225 Request: {"Cycle":2,"Lane":1,"Tile":2225,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF220","HCSMMF273","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.139 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2228 Request: {"Cycle":2,"Lane":1,"Tile":2228,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF219","HCSMMF197","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.140 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2223 Request: {"Cycle":2,"Lane":1,"Tile":2223,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF237","HCSMMF238","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.141 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 2 Tile: 2227 Request: {"Cycle":2,"Lane":1,"Tile":2227,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF281","HCSMMF211","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:12.144 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:12.150 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:08:12.232 -08 000000032 INF: FPGA: Recv T3MOVETO 23
17-02-28 20:08:12.232 -08 000000032 INF: FPGA: Recv T1MOVETO 14
17-02-28 20:08:12.232 -08 000000032 INF: FPGA: Recv T2MOVETO 24
17-02-28 20:08:12.232 -08 000000057 INF: Tilt Motor 2: To move from 5.356 to 5.394 (0.038 mm) should take 25 steps, but required 24 steps (0.037 mm). Slippage = -0.002 mm (-0.04%)
17-02-28 20:08:12.232 -08 000000092 INF: Tilt Motor 1: To move from 5.023 to 5.000 (-0.023 mm) should take 15 steps, but required 14 steps (0.021 mm). Slippage = -0.002 mm (0.07%)
17-02-28 20:08:12.232 -08 000000057 INF: FPGA: Xmit T2RD\n
17-02-28 20:08:12.232 -08 000000020 INF: Tilt Motor 3: To move from 5.303 to 5.339 (0.036 mm) should take 24 steps, but required 23 steps (0.035 mm). Slippage = -0.002 mm (-0.04%)
17-02-28 20:08:12.233 -08 000000020 INF: FPGA: Xmit T3RD\n
17-02-28 20:08:12.235 -08 000000092 INF: FPGA: Xmit T1RD\n
17-02-28 20:08:12.237 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:12.238 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:08:12.274 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:12.280 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:08:12.294 -08 000000035 INF: FPGA: Recv T2RD 21230
17-02-28 20:08:12.294 -08 000000035 INF: FPGA: Recv T3RD 21015
17-02-28 20:08:12.294 -08 000000035 INF: FPGA: Recv T1RD 19693
17-02-28 20:08:12.294 -08 000000092 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:08:12.294 -08 000000020 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6
17-02-28 20:08:12.294 -08 000000092 INF: FPGA: Xmit T1RD\n
17-02-28 20:08:12.294 -08 000000057 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:08:12.295 -08 000000020 INF: FPGA: Xmit T3RD\n
17-02-28 20:08:12.297 -08 000000057 INF: FPGA: Xmit T2RD\n
17-02-28 20:08:12.356 -08 000000044 INF: FPGA: Recv T1RD 19693
17-02-28 20:08:12.356 -08 000000044 INF: FPGA: Recv T3RD 21015
17-02-28 20:08:12.356 -08 000000044 INF: FPGA: Recv T2RD 21230
17-02-28 20:08:12.356 -08 000000057 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:08:12.356 -08 000000092 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:08:12.356 -08 000000057 INF: FPGA: Xmit T2RD\n
17-02-28 20:08:12.356 -08 000000020 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6
17-02-28 20:08:12.357 -08 000000020 INF: FPGA: Xmit T3RD\n
17-02-28 20:08:12.359 -08 000000092 INF: FPGA: Xmit T1RD\n
17-02-28 20:08:12.371 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:12.377 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:08:12.418 -08 000000030 INF: FPGA: Recv T2RD 21230
17-02-28 20:08:12.418 -08 000000030 INF: FPGA: Recv T3RD 21015
17-02-28 20:08:12.418 -08 000000030 INF: FPGA: Recv T1RD 19693
17-02-28 20:08:12.418 -08 000000092 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:08:12.418 -08 000000020 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6
17-02-28 20:08:12.418 -08 000000092 INF: Tilt Motor 1: After move to 5.0005, error = 0.0015, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:08:12.418 -08 000000020 INF: Tilt Motor 3: After move to 5.3391, error = -0.0013, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:08:12.418 -08 000000020 INF: Tilt Motor 3: Moved to 5.3378 after 448.8876 ms
17-02-28 20:08:12.418 -08 000000057 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:08:12.418 -08 000000057 INF: Tilt Motor 2: After move to 5.3939, error = -0.0015, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:08:12.418 -08 000000057 INF: Tilt Motor 2: Moved to 5.3924 after 452.9919 ms
17-02-28 20:08:12.418 -08 000000092 INF: Tilt Motor 1: Moved to 5.0020 after 452.9083 ms
17-02-28 20:08:12.419 -08 000000020 INF: ======================================
17-02-28 20:08:12.419 -08 000000057 INF: ======================================
17-02-28 20:08:12.419 -08 000000092 INF: ======================================
17-02-28 20:08:12.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:12.421 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:12.427 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm.
17-02-28 20:08:12.436 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:08:12.436 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:08:12.436 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:08:12.436 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:08:12.437 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:08:12.440 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:08:12.440 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:08:12.440 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:08:12.466 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:12.472 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:08:12.480 -08 000000035 INF: FPGA: Recv ZSTEP 
17-02-28 20:08:12.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:08:12.481 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:08:12.481 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1043 mm
17-02-28 20:08:12.481 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:08:12.542 -08 000000078 INF: FPGA: Recv ZTRG 
17-02-28 20:08:12.542 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:08:12.557 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:12.604 -08 000000100 INF: FPGA: Recv ZYT 
17-02-28 20:08:12.604 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:08:12.604 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:08:12.670 -08 000000045 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:08:12.670 -08 000000045 INF: FPGA: Recv ZMV 
17-02-28 20:08:12.670 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:08:12.670 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 65.7235 ms
17-02-28 20:08:12.670 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:08:12.729 -08 000000030 INF: FPGA: Recv ZDACR 60292
17-02-28 20:08:12.729 -08 000000042 INF: Z Motor: MoveAndTrigger took 248.5637 ms w/comms
17-02-28 20:08:12.729 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:08:12.730 -08 000000042 INF: Z Motor: MoveAbsStepped took 248.7804 ms
17-02-28 20:08:12.730 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:08:12.731 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm.
17-02-28 20:08:12.739 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:08:12.739 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:08:12.739 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:08:12.739 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:08:12.739 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:08:12.794 -08 000000068 INF: FPGA: Recv ZSTEP 
17-02-28 20:08:12.804 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:08:12.804 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm.
17-02-28 20:08:12.813 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:08:12.813 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:08:12.813 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:08:12.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:12.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:08:12.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:12.815 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = B_1
17-02-28 20:08:12.816 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:12.816 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:12.817 -08 000000090 INF: ===================Move X,Y===================
17-02-28 20:08:12.817 -08 000000054 INF: ===================MoveEmissionFilters===================
17-02-28 20:08:12.818 -08 000000090 INF: ===================Move X,Y, Parallel===================
17-02-28 20:08:12.818 -08 000000096 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:08:12.818 -08 000000050 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:08:12.818 -08 000000045 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:08:12.818 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:08:12.819 -08 000000066 INF: ===================Move X Motor without settling===================
17-02-28 20:08:12.819 -08 000000086 INF: ===================Move Y Motor without settling===================
17-02-28 20:08:12.819 -08 000000096 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:08:12.819 -08 000000066 INF: X Motor: Xmit PR VM\n
17-02-28 20:08:12.819 -08 000000050 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:08:12.819 -08 000000086 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9303 mm
17-02-28 20:08:12.819 -08 000000045 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:08:12.819 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:08:12.819 -08 000000086 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:08:12.819 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:12.820 -08 000000051 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:08:12.820 -08 000000083 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:08:12.820 -08 000000065 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:08:12.820 -08 000000076 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:08:12.820 -08 000000010 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:08:12.820 -08 000000057 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:08:12.821 -08 000000076 INF: ======================================
17-02-28 20:08:12.821 -08 000000057 INF: ======================================
17-02-28 20:08:12.821 -08 000000035 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:08:12.821 -08 000000025 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:08:12.821 -08 000000010 INF: ======================================
17-02-28 20:08:12.821 -08 000000025 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:08:12.821 -08 000000025 INF: ======================================
17-02-28 20:08:12.821 -08 000000035 INF: ======================================
17-02-28 20:08:12.822 -08 000000065 INF: ======================================
17-02-28 20:08:12.822 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:08:12.823 -08 000000096 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:08:12.823 -08 000000083 INF: ======================================
17-02-28 20:08:12.823 -08 000000051 INF: ======================================
17-02-28 20:08:12.824 -08 000000062 INF: ======================================
17-02-28 20:08:12.824 -08 000000096 INF: ======================================
17-02-28 20:08:12.824 -08 000000045 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:08:12.825 -08 000000050 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:08:12.826 -08 000000045 INF: ======================================
17-02-28 20:08:12.826 -08 000000050 INF: ======================================
17-02-28 20:08:12.827 -08 000000054 INF: ======================================
17-02-28 20:08:12.840 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:08:12.858 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:08:12.858 -08 000000086 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:08:12.858 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:12.858 -08 000000066 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:08:12.858 -08 000000066 INF: X Motor: Xmit PR VI\n
17-02-28 20:08:12.920 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:08:12.920 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:12.920 -08 000000066 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:08:12.920 -08 000000066 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:08:12.920 -08 000000066 INF: X Motor: Moving to 71.9506 mm @15.000 mm/sec, started at 69.7056 mm
17-02-28 20:08:12.920 -08 000000066 INF: X Motor: Xmit MA 5305\n
17-02-28 20:08:12.982 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:08:12.982 -08 000000086 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:12.982 -08 000000066 INF: X Motor: Recv MA 5305\r\n>
17-02-28 20:08:12.982 -08 000000086 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:08:12.982 -08 000000086 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:08:12.982 -08 000000066 INF: X Motor: WaitUntilStopped 60150
17-02-28 20:08:13.044 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:08:13.044 -08 000000086 INF: Y Motor: Start the move command
17-02-28 20:08:13.044 -08 000000086 INF: Y Motor: Xmit t 1\r
17-02-28 20:08:13.108 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:08:13.108 -08 000000086 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:08:13.108 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:13.230 -08 000000086 INF: Y Motor: Unshifted Position: 1074077
17-02-28 20:08:13.280 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:13.412 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:13.543 -08 000000086 INF: Y Motor: Unshifted Position: 1781362
17-02-28 20:08:13.593 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:13.605 -08 000000066 INF: X Motor: Xmit PR ER\n
17-02-28 20:08:13.667 -08 000000066 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:08:13.667 -08 000000066 INF: X Motor: Moved to 71.9517 after 685 ms
17-02-28 20:08:13.667 -08 000000066 INF: ======================================
17-02-28 20:08:13.718 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:13.856 -08 000000086 INF: Y Motor: Unshifted Position: 2583058
17-02-28 20:08:13.906 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:14.032 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:14.166 -08 000000086 INF: Y Motor: Unshifted Position: 3339653
17-02-28 20:08:14.216 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:14.342 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:14.478 -08 000000086 INF: Y Motor: Unshifted Position: 4125560
17-02-28 20:08:14.528 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:14.653 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:14.792 -08 000000086 INF: Y Motor: Unshifted Position: 4906345
17-02-28 20:08:14.842 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:14.967 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:15.103 -08 000000086 INF: Y Motor: Unshifted Position: 5679830
17-02-28 20:08:15.153 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:15.279 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:15.416 -08 000000086 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:08:15.416 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:08:15.416 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:15.480 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:08:15.480 -08 000000086 INF: Y Motor: Moved to 64.5335 after 2372 ms
17-02-28 20:08:15.480 -08 000000086 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:08:15.539 -08 000000086 INF: Y Motor: Recv v 4096\r
17-02-28 20:08:15.539 -08 000000086 INF: Y Motor: Status After move finished OK:
17-02-28 20:08:15.539 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:15.601 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:08:15.601 -08 000000086 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:15.601 -08 000000086 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:08:15.666 -08 000000086 INF: Y Motor: Recv v 402653184\r
17-02-28 20:08:15.666 -08 000000086 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:08:15.666 -08 000000086 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:08:15.666 -08 000000086 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:08:15.728 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:08:15.728 -08 000000086 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:08:15.728 -08 000000086 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:08:15.728 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:15.790 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:08:15.790 -08 000000086 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:08:15.790 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:15.852 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:08:15.852 -08 000000086 INF: ======================================
17-02-28 20:08:15.853 -08 000000090 INF: ===================Move X,Y===================
17-02-28 20:08:15.854 -08 000000090 INF: ======================================
17-02-28 20:08:15.855 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:15.856 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:15.856 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:08:15.856 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:08:15.915 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:08:15.915 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:08:15.974 -08 000000092 INF: FPGA: Recv ZFREQCL
17-02-28 20:08:15.974 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:08:15.974 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:15.975 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:08:16.037 -08 000000078 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:08:16.037 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:08:16.037 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:16.038 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:16.039 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:08:16.039 -08 000000088 INF: ===================Set YMotor gains for scans===================
17-02-28 20:08:16.039 -08 000000088 INF: ======================================
17-02-28 20:08:16.039 -08 000000044 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:08:16.040 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:08:16.041 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:08:16.042 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:08:16.042 -08 000000044 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:08:16.102 -08 000000035 INF: FPGA: Recv TDIYPOS
17-02-28 20:08:16.102 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:08:16.104 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:08:16.104 -08 000000044 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:08:16.161 -08 000000101 INF: FPGA: Recv TDIYARM2
17-02-28 20:08:16.161 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:08:16.162 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:08:16.164 -08 000000044 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:08:16.164 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:08:16.165 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:08:16.166 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:08:16.167 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:08:16.533 -08 000000044 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:08:16.533 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:08:16.533 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:08:16.549 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:08:16.551 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:08:16.930 -08 000000044 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:08:16.930 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:08:16.930 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:08:16.945 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:08:16.946 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:08:16.948 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:08:16.949 -08 000000044 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:16.950 -08 000000044 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:08:16.950 -08 000000044 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:16.951 -08 000000044 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:08:16.952 -08 000000044 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:08:16.952 -08 000000044 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:08:16.952 -08 000000044 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:08:16.975 -08 000000020 INF: FPGA: Recv ZYT 
17-02-28 20:08:16.975 -08 000000044 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:08:16.975 -08 000000044 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:08:17.037 -08 000000101 INF: FPGA: Recv ZARM
17-02-28 20:08:17.037 -08 000000044 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.1648 ms
17-02-28 20:08:17.037 -08 000000044 INF: Z Motor: ArmAbsStepped took 85.5423 ms
17-02-28 20:08:17.037 -08 000000044 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:17.039 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:08:17.040 -08 000000044 INF: ======================================
17-02-28 20:08:17.041 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:17.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:17.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:17.043 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:17.043 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:17.044 -08 000000090 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:08:17.044 -08 000000035 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:08:17.044 -08 000000090 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:08:17.044 -08 000000090 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:08:17.044 -08 000000090 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:08:17.044 -08 000000035 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:08:17.044 -08 000000035 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:08:17.044 -08 000000035 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:08:17.045 -08 000000090 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:08:17.047 -08 000000035 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:08:17.410 -08 000000092 INF: FPGA: Recv EX2MV
17-02-28 20:08:17.410 -08 000000092 INF: FPGA: Recv EX1MV
17-02-28 20:08:17.410 -08 000000090 INF: Excitation Filter 2: Moved -107 steps in 365.6632 ms
17-02-28 20:08:17.410 -08 000000035 INF: Excitation Filter 1: Moved -107 steps in 365.5631 ms
17-02-28 20:08:17.410 -08 000000035 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.7465 ms
17-02-28 20:08:17.410 -08 000000035 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.8228 ms
17-02-28 20:08:17.410 -08 000000090 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.7658 ms
17-02-28 20:08:17.410 -08 000000090 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.1445 ms
17-02-28 20:08:17.410 -08 000000035 INF: ======================================
17-02-28 20:08:17.411 -08 000000090 INF: ======================================
17-02-28 20:08:17.412 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:17.413 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:17.414 -08 000000064 INF: ===================Serial===================
17-02-28 20:08:17.414 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:08:17.414 -08 000000051 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:17.414 -08 000000066 INF: ===================Move Y Motor without settling===================
17-02-28 20:08:17.414 -08 000000066 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:08:17.414 -08 000000066 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:08:17.414 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:17.415 -08 000000064 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:08:17.415 -08 000000033 INF: ===================Camera TDI, Parallel===================
17-02-28 20:08:17.415 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:08:17.416 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:08:17.416 -08 000000051 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:08:17.416 -08 000000097 INF: ===================Camera TDI===================
17-02-28 20:08:17.416 -08 000000051 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:08:17.417 -08 000000097 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:17.417 -08 000000097 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:17.417 -08 000000045 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:17.417 -08 000000045 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:17.475 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:08:17.475 -08 000000066 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:08:17.475 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:17.537 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:08:17.537 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:17.567 -08 000000097 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:17.567 -08 000000045 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:17.567 -08 000000045 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:17.567 -08 000000097 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:17.599 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:08:17.599 -08 000000066 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:17.599 -08 000000066 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:08:17.599 -08 000000066 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:08:17.665 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:08:17.665 -08 000000066 INF: Y Motor: Start the move command
17-02-28 20:08:17.665 -08 000000066 INF: Y Motor: Xmit t 1\r
17-02-28 20:08:17.717 -08 000000097 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:17.717 -08 000000097 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:17.717 -08 000000045 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:17.717 -08 000000045 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:17.724 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:08:17.724 -08 000000066 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:08:17.724 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:17.851 -08 000000066 INF: Y Motor: Unshifted Position: 5935726
17-02-28 20:08:17.867 -08 000000097 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:17.867 -08 000000045 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:17.867 -08 000000045 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:17.867 -08 000000097 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:17.901 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:18.017 -08 000000097 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:08:18.017 -08 000000045 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:08:18.017 -08 000000045 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:08:18.017 -08 000000097 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:08:18.017 -08 000000045 INF: ===================Camera #0 Frame #1===================
17-02-28 20:08:18.017 -08 000000097 INF: ===================Camera #2 Frame #1===================
17-02-28 20:08:18.025 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:18.161 -08 000000066 INF: Y Motor: Unshifted Position: 5888578
17-02-28 20:08:18.170 -08 000000097 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:08:18.170 -08 000000045 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:08:18.170 -08 000000045 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2
17-02-28 20:08:18.170 -08 000000097 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2
17-02-28 20:08:18.170 -08 000000045 INF: ===================Camera #0 Frame #2===================
17-02-28 20:08:18.170 -08 000000097 INF: ===================Camera #2 Frame #2===================
17-02-28 20:08:18.211 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:18.323 -08 000000045 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:08:18.323 -08 000000097 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:08:18.323 -08 000000097 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:08:18.323 -08 000000045 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:08:18.323 -08 000000097 INF: ===================Camera #2 Frame #4===================
17-02-28 20:08:18.323 -08 000000045 INF: ===================Camera #0 Frame #4===================
17-02-28 20:08:18.339 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:18.475 -08 000000066 INF: Y Motor: Unshifted Position: 5842071
17-02-28 20:08:18.479 -08 000000097 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:08:18.479 -08 000000045 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:08:18.479 -08 000000045 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:08:18.479 -08 000000097 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:08:18.479 -08 000000045 INF: ===================Camera #0 Frame #5===================
17-02-28 20:08:18.479 -08 000000097 INF: ===================Camera #2 Frame #5===================
17-02-28 20:08:18.525 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:18.533 -08 000000074 INF: FPGA: Recv ZWAIT 
17-02-28 20:08:18.533 -08 000000074 INF: FPGA: Recv TDIYWAIT
17-02-28 20:08:18.533 -08 000000051 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:18.533 -08 000000064 INF: ===================Serial===================
17-02-28 20:08:18.535 -08 000000051 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:08:18.535 -08 000000064 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:08:18.535 -08 000000064 INF: ===================Serial===================
17-02-28 20:08:18.536 -08 000000032 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:08:18.536 -08 000000073 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:08:18.536 -08 000000032 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:08:18.536 -08 000000032 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:08:18.536 -08 000000032 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:08:18.536 -08 000000073 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:08:18.536 -08 000000073 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:08:18.536 -08 000000073 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:08:18.536 -08 000000032 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:08:18.536 -08 000000064 INF: ======================================
17-02-28 20:08:18.537 -08 000000073 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:08:18.632 -08 000000097 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:08:18.632 -08 000000045 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:08:18.632 -08 000000097 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:08:18.632 -08 000000045 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:08:18.633 -08 000000097 INF: ===================Camera #2 Frame #6===================
17-02-28 20:08:18.633 -08 000000045 INF: ===================Camera #0 Frame #6===================
17-02-28 20:08:18.636 -08 000000097 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:08:18.636 -08 000000045 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:08:18.637 -08 000000097 INF: ===================CameraTDI Cleanup===================
17-02-28 20:08:18.638 -08 000000045 INF: ===================CameraTDI Cleanup===================
17-02-28 20:08:18.651 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:18.661 -08 000000097 INF: Camera #2 ReleaseBuffer
17-02-28 20:08:18.661 -08 000000097 INF: ===================Camera TDI===================
17-02-28 20:08:18.662 -08 000000097 INF: ======================================
17-02-28 20:08:18.685 -08 000000045 INF: Camera #0 ReleaseBuffer
17-02-28 20:08:18.685 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:08:18.686 -08 000000045 INF: ======================================
17-02-28 20:08:18.687 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:08:18.689 -08 000000033 INF: ======================================
17-02-28 20:08:18.787 -08 000000066 INF: Y Motor: Unshifted Position: 5797057
17-02-28 20:08:18.837 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:18.909 -08 000000044 INF: FPGA: Recv EX1MV
17-02-28 20:08:18.909 -08 000000044 INF: FPGA: Recv EX2MV
17-02-28 20:08:18.909 -08 000000032 INF: Excitation Filter 1: Moved 107 steps in 373.1083 ms
17-02-28 20:08:18.909 -08 000000073 INF: Excitation Filter 2: Moved 107 steps in 373.0088 ms
17-02-28 20:08:18.909 -08 000000032 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.2414 ms
17-02-28 20:08:18.909 -08 000000073 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.1407 ms
17-02-28 20:08:18.909 -08 000000032 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.3509 ms
17-02-28 20:08:18.909 -08 000000073 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.2539 ms
17-02-28 20:08:18.910 -08 000000032 INF: ======================================
17-02-28 20:08:18.910 -08 000000073 INF: ======================================
17-02-28 20:08:18.911 -08 000000051 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:18.912 -08 000000051 INF: ======================================
17-02-28 20:08:18.973 -08 000000066 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:08:18.973 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:08:18.973 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:19.035 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:08:19.035 -08 000000066 INF: Y Motor: Moved to 62.9704 after 1311 ms
17-02-28 20:08:19.035 -08 000000066 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:08:19.097 -08 000000066 INF: Y Motor: Recv v 4097\r
17-02-28 20:08:19.097 -08 000000066 INF: Y Motor: Status After move finished OK:
17-02-28 20:08:19.097 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:19.159 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:08:19.159 -08 000000066 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:19.159 -08 000000066 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:08:19.221 -08 000000066 INF: Y Motor: Recv v 134217728\r
17-02-28 20:08:19.221 -08 000000066 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:08:19.221 -08 000000066 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:08:19.221 -08 000000066 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:08:19.286 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:08:19.286 -08 000000066 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:08:19.286 -08 000000066 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:08:19.286 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:19.348 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:08:19.348 -08 000000066 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:08:19.348 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:19.410 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:08:19.410 -08 000000066 INF: ======================================
17-02-28 20:08:19.411 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:19.412 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:19.413 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:19.413 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:08:19.470 -08 000000058 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:08:19.470 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:08:19.532 -08 000000088 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:08:19.532 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:08:19.594 -08 000000052 INF: FPGA: Recv ZADCR 2425
17-02-28 20:08:19.594 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:08:19.594 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:08:19.656 -08 000000053 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:08:19.656 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:08:19.656 -08 000000042 INF: TDIScan finished after 6850.9357 ms
17-02-28 20:08:19.656 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:08:19.656 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:08:19.656 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:08:19.721 -08 000000083 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:08:19.722 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:19.722 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:19.723 -08 000000033 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:08:19.723 -08 000000103 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:08:19.723 -08 000000073 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:08:19.723 -08 000000103 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:08:19.723 -08 000000103 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:08:19.724 -08 000000073 INF: ======================================
17-02-28 20:08:19.724 -08 000000033 INF: ======================================
17-02-28 20:08:19.785 -08 000000103 INF: Y Motor: Recv ok\r
17-02-28 20:08:19.785 -08 000000103 INF: ======================================
17-02-28 20:08:19.786 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:19.787 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:19.788 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:08:19.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:19.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:08:19.866 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:19.866 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:08:19.892 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:19.892 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:08:19.916 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:19.917 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:08:19.917 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:08:19.918 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:08:19.925 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:08:19.926 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:08:19.926 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:08:20.611 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:08:20.634 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0826979137620725Best Z position at top surface = -0.153799842835053Best Z position at top surface + compensator offset = -0.131099842835053 C:2,L:2,B
17-02-28 20:08:20.636 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.153799842835053
17-02-28 20:08:20.636 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94691
17-02-28 20:08:20.636 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0826979137620725
17-02-28 20:08:20.636 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.60467
17-02-28 20:08:20.636 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0826979137620725.
17-02-28 20:08:20.636 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:08:20.771 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:08:20.771 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:08:20.781 -08 000000094 INF: FPGA: Recv ZSTEP 
17-02-28 20:08:20.781 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:08:20.782 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:20.783 -08 000000042 INF: Lane 2, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:08:20.783 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:20.784 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:20.784 -08 000000097 INF: ===================Move Tilt Motor 1===================
17-02-28 20:08:20.784 -08 000000050 INF: ===================Move Tilt Motor 2===================
17-02-28 20:08:20.784 -08 000000097 INF: Tilt Motor 1: Moving to 5.0005 mm, started at 5.0020 mm, delta = -0.0015 mm
17-02-28 20:08:20.784 -08 000000097 INF: FPGA: Xmit T1RD\n
17-02-28 20:08:20.784 -08 000000050 INF: Tilt Motor 2: Moving to 5.3939 mm, started at 5.3924 mm, delta = 0.0015 mm
17-02-28 20:08:20.785 -08 000000058 INF: ===================Move Tilt Motor 3===================
17-02-28 20:08:20.785 -08 000000058 INF: Tilt Motor 3: Moving to 5.3391 mm, started at 5.3378 mm, delta = 0.0013 mm
17-02-28 20:08:20.786 -08 000000058 INF: FPGA: Xmit T3RD\n
17-02-28 20:08:20.787 -08 000000050 INF: FPGA: Xmit T2RD\n
17-02-28 20:08:20.843 -08 000000086 INF: FPGA: Recv T1RD 19693
17-02-28 20:08:20.843 -08 000000086 INF: FPGA: Recv T3RD 21014
17-02-28 20:08:20.843 -08 000000086 INF: FPGA: Recv T2RD 21230
17-02-28 20:08:20.843 -08 000000050 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:08:20.843 -08 000000050 INF: Tilt Motor 2: Moving to 21236 encoder counts
17-02-28 20:08:20.843 -08 000000050 INF: FPGA: Xmit T2MOVETO 21236\n
17-02-28 20:08:20.843 -08 000000058 INF: Tilt Motor 3: Encoder: at motor step 3502 + 2/6
17-02-28 20:08:20.843 -08 000000058 INF: Tilt Motor 3: Moving to 21020 encoder counts
17-02-28 20:08:20.843 -08 000000097 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:08:20.843 -08 000000097 INF: Tilt Motor 1: Moving to 19687 encoder counts
17-02-28 20:08:20.844 -08 000000097 INF: FPGA: Xmit T1MOVETO 19687\n
17-02-28 20:08:20.846 -08 000000058 INF: FPGA: Xmit T3MOVETO 21020\n
17-02-28 20:08:20.967 -08 000000025 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:08:20.967 -08 000000025 INF: FPGA: Recv T1MOVETO 1
17-02-28 20:08:20.967 -08 000000025 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:08:20.967 -08 000000097 INF: Tilt Motor 1: To move from 5.002 to 5.000 (-0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:08:20.967 -08 000000058 INF: Tilt Motor 3: To move from 5.338 to 5.339 (0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:08:20.967 -08 000000097 INF: FPGA: Xmit T1RD\n
17-02-28 20:08:20.967 -08 000000050 INF: Tilt Motor 2: To move from 5.392 to 5.394 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:08:20.968 -08 000000058 INF: FPGA: Xmit T3RD\n
17-02-28 20:08:20.970 -08 000000050 INF: FPGA: Xmit T2RD\n
17-02-28 20:08:21.029 -08 000000062 INF: FPGA: Recv T1RD 19687
17-02-28 20:08:21.029 -08 000000062 INF: FPGA: Recv T3RD 21021
17-02-28 20:08:21.029 -08 000000062 INF: FPGA: Recv T2RD 21236
17-02-28 20:08:21.029 -08 000000050 INF: Tilt Motor 2: Encoder: at motor step 3539 + 2/6
17-02-28 20:08:21.029 -08 000000097 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:08:21.029 -08 000000058 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:08:21.029 -08 000000050 INF: FPGA: Xmit T2RD\n
17-02-28 20:08:21.030 -08 000000097 INF: FPGA: Xmit T1RD\n
17-02-28 20:08:21.032 -08 000000058 INF: FPGA: Xmit T3RD\n
17-02-28 20:08:21.091 -08 000000067 INF: FPGA: Recv T2RD 21236
17-02-28 20:08:21.091 -08 000000067 INF: FPGA: Recv T1RD 19687
17-02-28 20:08:21.091 -08 000000067 INF: FPGA: Recv T3RD 21021
17-02-28 20:08:21.091 -08 000000058 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:08:21.091 -08 000000097 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:08:21.091 -08 000000050 INF: Tilt Motor 2: Encoder: at motor step 3539 + 2/6
17-02-28 20:08:21.091 -08 000000058 INF: FPGA: Xmit T3RD\n
17-02-28 20:08:21.092 -08 000000097 INF: FPGA: Xmit T1RD\n
17-02-28 20:08:21.094 -08 000000050 INF: FPGA: Xmit T2RD\n
17-02-28 20:08:21.156 -08 000000039 INF: FPGA: Recv T3RD 21021
17-02-28 20:08:21.156 -08 000000039 INF: FPGA: Recv T1RD 19687
17-02-28 20:08:21.156 -08 000000039 INF: FPGA: Recv T2RD 21236
17-02-28 20:08:21.156 -08 000000050 INF: Tilt Motor 2: Encoder: at motor step 3539 + 2/6
17-02-28 20:08:21.156 -08 000000058 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:08:21.156 -08 000000097 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:08:21.156 -08 000000058 INF: Tilt Motor 3: After move to 5.3391, error = 0.0003, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:08:21.156 -08 000000050 INF: Tilt Motor 2: After move to 5.3939, error = 0.0000, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:08:21.156 -08 000000058 INF: Tilt Motor 3: Moved to 5.3393 after 371.3478 ms
17-02-28 20:08:21.156 -08 000000050 INF: Tilt Motor 2: Moved to 5.3939 after 371.5797 ms
17-02-28 20:08:21.156 -08 000000097 INF: Tilt Motor 1: After move to 5.0005, error = 0.0000, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:08:21.156 -08 000000058 INF: ======================================
17-02-28 20:08:21.156 -08 000000097 INF: Tilt Motor 1: Moved to 5.0005 after 371.9257 ms
17-02-28 20:08:21.156 -08 000000050 INF: ======================================
17-02-28 20:08:21.157 -08 000000097 INF: ======================================
17-02-28 20:08:21.158 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:21.158 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:21.159 -08 000000042 INF: ETF Best Z: -0.08269791 mm (21678 DAC)
17-02-28 20:08:21.159 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:21.160 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:21.160 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:08:21.160 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:21.161 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:21.561 -08 000000042 INF: Swath 1 position calculated to be: {X=71.39318, Y=39.78827} from estimated center X= 71.91199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:08:21.561 -08 000000042 INF: Swath 2 position calculated to be: {X=72.50118, Y=39.78827} from estimated center X= 71.91199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:08:21.566 -08 000000042 INF: Swath 0: Converted transform from (-46.79005, -1.122072) pixels to (-0.016215, -0.000345) mm.
17-02-28 20:08:21.572 -08 000000042 INF: Swath 1: Converted transform from (-65.6412, -0.9061241) pixels to (-0.02277, -0.000345) mm.
17-02-28 20:08:21.573 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827===================
17-02-28 20:08:21.574 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827===================
17-02-28 20:08:21.574 -08 000000042 INF: Transformed XStagePosition from 71.39318 mm to 71.3769658468664 mm.
17-02-28 20:08:21.585 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.577932801506 mm.
17-02-28 20:08:21.585 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.377932801506 mm.
17-02-28 20:08:21.585 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.468682801506 mm.
17-02-28 20:08:21.588 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:21.588 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:08:21.588 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:21.588 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = B_1
17-02-28 20:08:21.596 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:21.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:21.597 -08 000000044 INF: ===================MoveEmissionFilters===================
17-02-28 20:08:21.598 -08 000000070 INF: ===================Move X,Y===================
17-02-28 20:08:21.598 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:08:21.598 -08 000000035 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:08:21.598 -08 000000072 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:08:21.598 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:08:21.598 -08 000000070 INF: ===================Move X,Y, Parallel===================
17-02-28 20:08:21.598 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:08:21.598 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:08:21.599 -08 000000085 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:08:21.599 -08 000000035 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:08:21.599 -08 000000085 INF: Z Motor: Moving to -0.1027 mm, started at -0.0100 mm
17-02-28 20:08:21.599 -08 000000072 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:08:21.599 -08 000000085 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:08:21.599 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:08:21.599 -08 000000101 INF: ===================Move X Motor without settling===================
17-02-28 20:08:21.599 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:08:21.599 -08 000000047 INF: ===================Move Y Motor without settling===================
17-02-28 20:08:21.599 -08 000000101 INF: X Motor: Xmit PR VM\n
17-02-28 20:08:21.599 -08 000000047 INF: Y Motor: Moving to 64.5779 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:08:21.600 -08 000000047 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:08:21.600 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:21.600 -08 000000020 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:08:21.600 -08 000000037 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:08:21.600 -08 000000094 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:08:21.600 -08 000000010 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:08:21.600 -08 000000045 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:08:21.600 -08 000000039 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:08:21.600 -08 000000037 INF: ======================================
17-02-28 20:08:21.601 -08 000000039 INF: ======================================
17-02-28 20:08:21.601 -08 000000045 INF: ======================================
17-02-28 20:08:21.601 -08 000000020 INF: ======================================
17-02-28 20:08:21.601 -08 000000010 INF: ======================================
17-02-28 20:08:21.602 -08 000000072 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:08:21.602 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:08:21.603 -08 000000020 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:08:21.603 -08 000000050 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:08:21.603 -08 000000094 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:08:21.603 -08 000000072 INF: ======================================
17-02-28 20:08:21.603 -08 000000050 INF: ======================================
17-02-28 20:08:21.603 -08 000000069 INF: ======================================
17-02-28 20:08:21.604 -08 000000020 INF: ======================================
17-02-28 20:08:21.604 -08 000000094 INF: ======================================
17-02-28 20:08:21.605 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:08:21.605 -08 000000035 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:08:21.606 -08 000000066 INF: ======================================
17-02-28 20:08:21.607 -08 000000035 INF: ======================================
17-02-28 20:08:21.608 -08 000000044 INF: ======================================
17-02-28 20:08:21.670 -08 000000034 INF: FPGA: Recv ZTRG 
17-02-28 20:08:21.670 -08 000000085 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:08:21.687 -08 000000101 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:08:21.687 -08 000000101 INF: X Motor: Xmit PR VI\n
17-02-28 20:08:21.687 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:08:21.687 -08 000000047 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:08:21.687 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:21.731 -08 000000102 INF: FPGA: Recv ZYT 
17-02-28 20:08:21.731 -08 000000085 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:08:21.731 -08 000000085 INF: FPGA: Xmit ZMV 26921\n
17-02-28 20:08:21.751 -08 000000101 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:08:21.751 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:08:21.751 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:21.751 -08 000000101 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:08:21.751 -08 000000101 INF: X Motor: Moving to 71.3770 mm @15.000 mm/sec, started at 71.9517 mm
17-02-28 20:08:21.751 -08 000000101 INF: X Motor: Xmit MA 5070\n
17-02-28 20:08:21.793 -08 000000030 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:08:21.793 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:08:21.813 -08 000000101 INF: X Motor: Recv MA 5070\r\n>
17-02-28 20:08:21.813 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:08:21.813 -08 000000047 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:21.813 -08 000000101 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:08:21.813 -08 000000047 INF: Y Motor: Set target position to 5957793 encoder counts
17-02-28 20:08:21.813 -08 000000047 INF: Y Motor: Xmit s r0xca 5957793\r
17-02-28 20:08:21.857 -08 000000051 INF: FPGA: Recv ZMV 
17-02-28 20:08:21.857 -08 000000085 INF: Z Motor: MoveAndTrigger 'ZMV' command took 126.0053 ms
17-02-28 20:08:21.857 -08 000000085 INF: FPGA: Xmit ZDACR\n
17-02-28 20:08:21.874 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:08:21.874 -08 000000047 INF: Y Motor: Start the move command
17-02-28 20:08:21.874 -08 000000047 INF: Y Motor: Xmit t 1\r
17-02-28 20:08:21.919 -08 000000052 INF: FPGA: Recv ZDACR 26921
17-02-28 20:08:21.919 -08 000000085 INF: Z Motor: MoveAndTrigger took 319.9026 ms w/comms
17-02-28 20:08:21.919 -08 000000085 INF: Z Motor: After move to -0.1027, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:08:21.919 -08 000000085 INF: Z Motor: MoveAbsStepped took 320.1246 ms
17-02-28 20:08:21.919 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:08:21.921 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:08:21.921 -08 000000072 INF: ===================Camera Arm TDI===================
17-02-28 20:08:21.921 -08 000000030 INF: ===================TDI Scan Setup===================
17-02-28 20:08:21.922 -08 000000072 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:08:21.922 -08 000000030 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:21.923 -08 000000072 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:08:21.923 -08 000000030 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:08:21.924 -08 000000030 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:08:21.924 -08 000000030 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:08:21.936 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:08:21.936 -08 000000047 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:08:21.936 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:21.983 -08 000000100 INF: FPGA: Recv ZSEL 
17-02-28 20:08:21.984 -08 000000030 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:08:21.984 -08 000000030 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:08:22.045 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:08:22.045 -08 000000030 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:08:22.046 -08 000000030 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:08:22.047 -08 000000030 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:22.048 -08 000000030 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:08:22.048 -08 000000030 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:08:22.048 -08 000000030 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:08:22.062 -08 000000047 INF: Y Motor: Unshifted Position: 5882320
17-02-28 20:08:22.107 -08 000000033 INF: FPGA: Recv ZSTEP 
17-02-28 20:08:22.107 -08 000000030 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:22.109 -08 000000030 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:08:22.109 -08 000000030 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:22.111 -08 000000030 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:08:22.111 -08 000000030 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:08:22.111 -08 000000030 INF: Z Motor: Arming to move to -0.0627 mm
17-02-28 20:08:22.111 -08 000000030 INF: FPGA: Xmit ZYT 6437793 4\n
17-02-28 20:08:22.112 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:22.168 -08 000000062 INF: FPGA: Recv ZYT 
17-02-28 20:08:22.168 -08 000000030 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6382320 enc / 63.823 mm / ) = 6437793 enc / 64.378 mm
17-02-28 20:08:22.168 -08 000000030 INF: FPGA: Xmit ZARM 16436\n
17-02-28 20:08:22.230 -08 000000073 INF: FPGA: Recv ZARM
17-02-28 20:08:22.230 -08 000000030 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9652 ms
17-02-28 20:08:22.230 -08 000000030 INF: Z Motor: ArmAbsStepped took 119.0129 ms
17-02-28 20:08:22.230 -08 000000030 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:22.231 -08 000000030 INF: ===================TDI Scan Setup===================
17-02-28 20:08:22.233 -08 000000030 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:08:22.233 -08 000000030 INF: ===================TDI Scan Setup===================
17-02-28 20:08:22.235 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:22.235 -08 000000030 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:08:22.235 -08 000000030 INF: ===================TDI Scan Setup===================
17-02-28 20:08:22.236 -08 000000030 INF: ======================================
17-02-28 20:08:22.250 -08 000000101 INF: X Motor: Xmit PR ER\n
17-02-28 20:08:22.312 -08 000000101 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:08:22.312 -08 000000101 INF: X Motor: Moved to 71.3779 after 499 ms
17-02-28 20:08:22.312 -08 000000101 INF: ======================================
17-02-28 20:08:22.373 -08 000000047 INF: Y Motor: Unshifted Position: 5957794
17-02-28 20:08:22.373 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:08:22.373 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:22.435 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:08:22.435 -08 000000047 INF: Y Motor: Moved to 64.5779 after 499 ms
17-02-28 20:08:22.435 -08 000000047 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:08:22.499 -08 000000047 INF: Y Motor: Recv v 4096\r
17-02-28 20:08:22.499 -08 000000047 INF: Y Motor: Status After move finished OK:
17-02-28 20:08:22.499 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:22.560 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:08:22.560 -08 000000047 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:22.560 -08 000000047 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:08:22.625 -08 000000047 INF: Y Motor: Recv v 402653184\r
17-02-28 20:08:22.625 -08 000000047 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:08:22.625 -08 000000047 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:08:22.625 -08 000000047 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:08:22.686 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:08:22.686 -08 000000047 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:08:22.686 -08 000000047 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:08:22.686 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:22.748 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:08:22.748 -08 000000047 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:08:22.748 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:22.809 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:08:22.809 -08 000000047 INF: ======================================
17-02-28 20:08:22.810 -08 000000070 INF: ===================Move X,Y===================
17-02-28 20:08:22.811 -08 000000070 INF: ======================================
17-02-28 20:08:22.880 -08 000000072 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:08:22.881 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:08:22.881 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:08:22.896 -08 000000072 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:08:22.898 -08 000000072 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:08:23.907 -08 000000072 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:08:23.907 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:08:23.907 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:08:23.923 -08 000000072 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:08:23.924 -08 000000072 INF: ===================Camera Arm TDI===================
17-02-28 20:08:23.926 -08 000000072 INF: ======================================
17-02-28 20:08:23.927 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:08:23.928 -08 000000085 INF: ======================================
17-02-28 20:08:23.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:23.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:23.930 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:08:23.930 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:08:23.995 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:08:23.995 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:08:24.042 -08 000000104 INF: FPGA: Recv ZFREQCL
17-02-28 20:08:24.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:08:24.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:24.042 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:08:24.104 -08 000000033 INF: FPGA: Recv TDIYERD 6457795
17-02-28 20:08:24.104 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457795 counts (64.578 mm)
17-02-28 20:08:24.104 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:24.105 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:24.105 -08 000000100 INF: ===================TDI FPGA Arm===================
17-02-28 20:08:24.105 -08 000000045 INF: ===================Set YMotor gains for scans===================
17-02-28 20:08:24.106 -08 000000045 INF: ======================================
17-02-28 20:08:24.106 -08 000000100 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:08:24.107 -08 000000100 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:08:24.107 -08 000000100 INF: FPGA: Xmit TDIYPOS 6346868\n
17-02-28 20:08:24.165 -08 000000092 INF: FPGA: Recv TDIYPOS
17-02-28 20:08:24.165 -08 000000100 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:08:24.166 -08 000000100 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:08:24.166 -08 000000100 INF: FPGA: Xmit TDIYARM3 139264 6437793 1 1\n
17-02-28 20:08:24.227 -08 000000081 INF: FPGA: Recv TDIYARM3
17-02-28 20:08:24.227 -08 000000100 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:08:24.228 -08 000000100 INF: ===================TDI FPGA Arm===================
17-02-28 20:08:24.229 -08 000000100 INF: ======================================
17-02-28 20:08:24.230 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:24.231 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:24.231 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:24.231 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:24.232 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:24.233 -08 000000033 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:08:24.233 -08 000000099 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:08:24.233 -08 000000033 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:08:24.233 -08 000000033 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:08:24.233 -08 000000033 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:08:24.233 -08 000000099 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:08:24.233 -08 000000099 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:08:24.233 -08 000000099 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:08:24.233 -08 000000033 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:08:24.234 -08 000000099 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:08:24.601 -08 000000040 INF: FPGA: Recv EX2MV
17-02-28 20:08:24.601 -08 000000040 INF: FPGA: Recv EX1MV
17-02-28 20:08:24.601 -08 000000099 INF: Excitation Filter 1: Moved -107 steps in 367.9263 ms
17-02-28 20:08:24.601 -08 000000099 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.027 ms
17-02-28 20:08:24.601 -08 000000099 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.1106 ms
17-02-28 20:08:24.601 -08 000000033 INF: Excitation Filter 2: Moved -107 steps in 368.0902 ms
17-02-28 20:08:24.601 -08 000000033 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.2939 ms
17-02-28 20:08:24.601 -08 000000033 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.3639 ms
17-02-28 20:08:24.601 -08 000000099 INF: ======================================
17-02-28 20:08:24.602 -08 000000033 INF: ======================================
17-02-28 20:08:24.603 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:24.604 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:24.605 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:08:24.605 -08 000000045 INF: ===================FPGA Z Wait===================
17-02-28 20:08:24.605 -08 000000102 INF: ===================Move Y Motor without settling===================
17-02-28 20:08:24.605 -08 000000045 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:08:24.605 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:24.605 -08 000000102 INF: Y Motor: Moving to 14.9296 mm @6.500 mm/sec, started at 64.5779 mm
17-02-28 20:08:24.605 -08 000000102 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:08:24.605 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:24.606 -08 000000032 INF: ===================Camera TDI, Parallel===================
17-02-28 20:08:24.606 -08 000000064 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:08:24.606 -08 000000064 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:08:24.606 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:08:24.606 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:08:24.608 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:24.609 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:24.609 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:24.609 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:24.682 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:08:24.682 -08 000000102 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:08:24.682 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:24.744 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:08:24.744 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:24.759 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:24.759 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:24.759 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:24.759 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:24.806 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:08:24.806 -08 000000102 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:24.806 -08 000000102 INF: Y Motor: Set target position to 992960 encoder counts
17-02-28 20:08:24.806 -08 000000102 INF: Y Motor: Xmit s r0xca 992960\r
17-02-28 20:08:24.870 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:08:24.870 -08 000000102 INF: Y Motor: Start the move command
17-02-28 20:08:24.870 -08 000000102 INF: Y Motor: Xmit t 1\r
17-02-28 20:08:24.909 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:24.909 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:24.909 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:24.909 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:24.932 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:08:24.932 -08 000000102 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:08:24.932 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:25.038 -08 000000096 INF: FPGA: Recv ZWAIT 
17-02-28 20:08:25.038 -08 000000045 INF: ======================================
17-02-28 20:08:25.058 -08 000000102 INF: Y Motor: Unshifted Position: 5896592
17-02-28 20:08:25.059 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:08:25.059 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:08:25.059 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:08:25.059 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:08:25.059 -08 000000039 INF: ===================Camera #2 Frame #4===================
17-02-28 20:08:25.059 -08 000000058 INF: ===================Camera #0 Frame #4===================
17-02-28 20:08:25.108 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:25.222 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:08:25.222 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:08:25.222 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:08:25.222 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:08:25.222 -08 000000058 INF: ===================Camera #0 Frame #10===================
17-02-28 20:08:25.222 -08 000000039 INF: ===================Camera #2 Frame #10===================
17-02-28 20:08:25.231 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:25.369 -08 000000102 INF: Y Motor: Unshifted Position: 5692274
17-02-28 20:08:25.391 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 15, frameCount = 16.
17-02-28 20:08:25.391 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 16
17-02-28 20:08:25.391 -08 000000058 INF: ===================Camera #0 Frame #16===================
17-02-28 20:08:25.392 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 15, frameCount = 16.
17-02-28 20:08:25.392 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 16
17-02-28 20:08:25.392 -08 000000039 INF: ===================Camera #2 Frame #16===================
17-02-28 20:08:25.419 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:25.542 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:25.561 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 21, frameCount = 22.
17-02-28 20:08:25.561 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 22
17-02-28 20:08:25.562 -08 000000058 INF: ===================Camera #0 Frame #22===================
17-02-28 20:08:25.563 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 21, frameCount = 22.
17-02-28 20:08:25.563 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 22
17-02-28 20:08:25.563 -08 000000039 INF: ===================Camera #2 Frame #22===================
17-02-28 20:08:25.682 -08 000000102 INF: Y Motor: Unshifted Position: 5490564
17-02-28 20:08:25.732 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:25.732 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:08:25.732 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:08:25.732 -08 000000058 INF: ===================Camera #0 Frame #29===================
17-02-28 20:08:25.734 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:08:25.734 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:08:25.734 -08 000000039 INF: ===================Camera #2 Frame #29===================
17-02-28 20:08:25.855 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:25.906 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:08:25.906 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:08:25.906 -08 000000058 INF: ===================Camera #0 Frame #35===================
17-02-28 20:08:25.908 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:08:25.908 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:08:25.908 -08 000000039 INF: ===================Camera #2 Frame #35===================
17-02-28 20:08:25.993 -08 000000102 INF: Y Motor: Unshifted Position: 5286462
17-02-28 20:08:26.043 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:26.074 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41.
17-02-28 20:08:26.074 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41
17-02-28 20:08:26.074 -08 000000058 INF: ===================Camera #0 Frame #41===================
17-02-28 20:08:26.077 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41.
17-02-28 20:08:26.077 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41
17-02-28 20:08:26.077 -08 000000039 INF: ===================Camera #2 Frame #41===================
17-02-28 20:08:26.166 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:26.196 -08 000000036 INF: RunCopyService queue size at 2/28/2017 8:08:26 PM is 2
17-02-28 20:08:26.243 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 46, frameCount = 47.
17-02-28 20:08:26.243 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 47
17-02-28 20:08:26.243 -08 000000058 INF: ===================Camera #0 Frame #47===================
17-02-28 20:08:26.247 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:08:26.247 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:08:26.247 -08 000000039 INF: ===================Camera #2 Frame #48===================
17-02-28 20:08:26.306 -08 000000102 INF: Y Motor: Unshifted Position: 5083441
17-02-28 20:08:26.356 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:26.411 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:08:26.411 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:08:26.411 -08 000000058 INF: ===================Camera #0 Frame #54===================
17-02-28 20:08:26.420 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:08:26.420 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:08:26.420 -08 000000039 INF: ===================Camera #2 Frame #54===================
17-02-28 20:08:26.479 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:26.583 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:08:26.583 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:08:26.583 -08 000000058 INF: ===================Camera #0 Frame #60===================
17-02-28 20:08:26.589 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:08:26.589 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:08:26.589 -08 000000039 INF: ===================Camera #2 Frame #60===================
17-02-28 20:08:26.618 -08 000000102 INF: Y Motor: Unshifted Position: 4880641
17-02-28 20:08:26.668 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:26.753 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-02-28 20:08:26.753 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-02-28 20:08:26.753 -08 000000058 INF: ===================Camera #0 Frame #66===================
17-02-28 20:08:26.760 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:08:26.760 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:08:26.760 -08 000000039 INF: ===================Camera #2 Frame #67===================
17-02-28 20:08:26.791 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:26.923 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:08:26.923 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:08:26.923 -08 000000058 INF: ===================Camera #0 Frame #73===================
17-02-28 20:08:26.929 -08 000000102 INF: Y Motor: Unshifted Position: 4678489
17-02-28 20:08:26.934 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:08:26.934 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:08:26.934 -08 000000039 INF: ===================Camera #2 Frame #73===================
17-02-28 20:08:26.979 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:27.096 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:08:27.096 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:08:27.096 -08 000000058 INF: ===================Camera #0 Frame #79===================
17-02-28 20:08:27.105 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:27.105 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:08:27.105 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:08:27.105 -08 000000039 INF: ===================Camera #2 Frame #79===================
17-02-28 20:08:27.240 -08 000000102 INF: Y Motor: Unshifted Position: 4476109
17-02-28 20:08:27.265 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:08:27.265 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:08:27.265 -08 000000058 INF: ===================Camera #0 Frame #85===================
17-02-28 20:08:27.274 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:08:27.274 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:08:27.274 -08 000000039 INF: ===================Camera #2 Frame #85===================
17-02-28 20:08:27.290 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:27.416 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:27.435 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-02-28 20:08:27.435 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-02-28 20:08:27.435 -08 000000058 INF: ===================Camera #0 Frame #91===================
17-02-28 20:08:27.445 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:08:27.445 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:08:27.445 -08 000000039 INF: ===================Camera #2 Frame #92===================
17-02-28 20:08:27.554 -08 000000102 INF: Y Motor: Unshifted Position: 4271796
17-02-28 20:08:27.604 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:27.605 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:08:27.605 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:08:27.605 -08 000000058 INF: ===================Camera #0 Frame #98===================
17-02-28 20:08:27.619 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:08:27.619 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:08:27.619 -08 000000039 INF: ===================Camera #2 Frame #98===================
17-02-28 20:08:27.728 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:27.778 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:08:27.778 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:08:27.778 -08 000000058 INF: ===================Camera #0 Frame #104===================
17-02-28 20:08:27.790 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:08:27.790 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:08:27.790 -08 000000039 INF: ===================Camera #2 Frame #104===================
17-02-28 20:08:27.867 -08 000000102 INF: Y Motor: Unshifted Position: 4068992
17-02-28 20:08:27.917 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:27.948 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:08:27.948 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:08:27.948 -08 000000058 INF: ===================Camera #0 Frame #110===================
17-02-28 20:08:27.961 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:08:27.961 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:08:27.961 -08 000000039 INF: ===================Camera #2 Frame #111===================
17-02-28 20:08:28.039 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:28.118 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:08:28.118 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:08:28.118 -08 000000058 INF: ===================Camera #0 Frame #117===================
17-02-28 20:08:28.135 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:08:28.135 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:08:28.135 -08 000000039 INF: ===================Camera #2 Frame #117===================
17-02-28 20:08:28.177 -08 000000102 INF: Y Motor: Unshifted Position: 3866847
17-02-28 20:08:28.227 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:28.291 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:08:28.291 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:08:28.291 -08 000000058 INF: ===================Camera #0 Frame #123===================
17-02-28 20:08:28.306 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:08:28.306 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:08:28.306 -08 000000039 INF: ===================Camera #2 Frame #123===================
17-02-28 20:08:28.353 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:28.461 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:08:28.461 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:08:28.461 -08 000000058 INF: ===================Camera #0 Frame #129===================
17-02-28 20:08:28.476 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:08:28.476 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:08:28.476 -08 000000039 INF: ===================Camera #2 Frame #130===================
17-02-28 20:08:28.489 -08 000000102 INF: Y Motor: Unshifted Position: 3664474
17-02-28 20:08:28.539 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:28.631 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:08:28.631 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:08:28.631 -08 000000058 INF: ===================Camera #0 Frame #135===================
17-02-28 20:08:28.649 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:08:28.649 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:08:28.649 -08 000000039 INF: ===================Camera #2 Frame #136===================
17-02-28 20:08:28.664 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:28.801 -08 000000102 INF: Y Motor: Unshifted Position: 3461464
17-02-28 20:08:28.801 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:08:28.801 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:08:28.801 -08 000000058 INF: ===================Camera #0 Frame #142===================
17-02-28 20:08:28.820 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:08:28.820 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:08:28.820 -08 000000039 INF: ===================Camera #2 Frame #142===================
17-02-28 20:08:28.851 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:28.974 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:08:28.974 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:08:28.974 -08 000000058 INF: ===================Camera #0 Frame #148===================
17-02-28 20:08:28.976 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:28.990 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:08:28.990 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:08:28.990 -08 000000039 INF: ===================Camera #2 Frame #149===================
17-02-28 20:08:29.114 -08 000000102 INF: Y Motor: Unshifted Position: 3257363
17-02-28 20:08:29.144 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:08:29.144 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:08:29.144 -08 000000058 INF: ===================Camera #0 Frame #154===================
17-02-28 20:08:29.164 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:29.164 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:08:29.164 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:08:29.164 -08 000000039 INF: ===================Camera #2 Frame #155===================
17-02-28 20:08:29.287 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:29.313 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:08:29.313 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:08:29.313 -08 000000058 INF: ===================Camera #0 Frame #161===================
17-02-28 20:08:29.334 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:08:29.334 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:08:29.334 -08 000000039 INF: ===================Camera #2 Frame #161===================
17-02-28 20:08:29.425 -08 000000102 INF: Y Motor: Unshifted Position: 3055002
17-02-28 20:08:29.475 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:29.486 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:08:29.486 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:08:29.486 -08 000000058 INF: ===================Camera #0 Frame #167===================
17-02-28 20:08:29.504 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:08:29.504 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:08:29.504 -08 000000039 INF: ===================Camera #2 Frame #168===================
17-02-28 20:08:29.601 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:29.656 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:08:29.656 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:08:29.656 -08 000000058 INF: ===================Camera #0 Frame #173===================
17-02-28 20:08:29.678 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:08:29.678 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:08:29.678 -08 000000039 INF: ===================Camera #2 Frame #174===================
17-02-28 20:08:29.738 -08 000000102 INF: Y Motor: Unshifted Position: 2851555
17-02-28 20:08:29.788 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:29.825 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:08:29.825 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:08:29.825 -08 000000058 INF: ===================Camera #0 Frame #179===================
17-02-28 20:08:29.849 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:08:29.849 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:08:29.849 -08 000000039 INF: ===================Camera #2 Frame #180===================
17-02-28 20:08:29.911 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:29.995 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:08:29.995 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:08:29.995 -08 000000058 INF: ===================Camera #0 Frame #186===================
17-02-28 20:08:30.020 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:08:30.020 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:08:30.020 -08 000000039 INF: ===================Camera #2 Frame #187===================
17-02-28 20:08:30.049 -08 000000102 INF: Y Motor: Unshifted Position: 2649188
17-02-28 20:08:30.099 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:30.168 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:08:30.168 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:08:30.168 -08 000000058 INF: ===================Camera #0 Frame #192===================
17-02-28 20:08:30.194 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:08:30.194 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:08:30.194 -08 000000039 INF: ===================Camera #2 Frame #193===================
17-02-28 20:08:30.225 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:30.338 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:08:30.338 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:08:30.338 -08 000000058 INF: ===================Camera #0 Frame #198===================
17-02-28 20:08:30.360 -08 000000102 INF: Y Motor: Unshifted Position: 2447044
17-02-28 20:08:30.365 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:08:30.365 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:08:30.365 -08 000000039 INF: ===================Camera #2 Frame #199===================
17-02-28 20:08:30.410 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:30.508 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:08:30.508 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:08:30.508 -08 000000058 INF: ===================Camera #0 Frame #205===================
17-02-28 20:08:30.536 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:30.536 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:08:30.536 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:08:30.536 -08 000000039 INF: ===================Camera #2 Frame #206===================
17-02-28 20:08:30.673 -08 000000102 INF: Y Motor: Unshifted Position: 2242725
17-02-28 20:08:30.681 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:08:30.681 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:08:30.681 -08 000000058 INF: ===================Camera #0 Frame #211===================
17-02-28 20:08:30.710 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:08:30.710 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:08:30.710 -08 000000039 INF: ===================Camera #2 Frame #212===================
17-02-28 20:08:30.723 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:30.849 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:30.851 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:08:30.851 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:08:30.851 -08 000000058 INF: ===================Camera #0 Frame #217===================
17-02-28 20:08:30.881 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:08:30.881 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:08:30.881 -08 000000039 INF: ===================Camera #2 Frame #218===================
17-02-28 20:08:30.984 -08 000000102 INF: Y Motor: Unshifted Position: 2041229
17-02-28 20:08:31.021 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:08:31.021 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:08:31.021 -08 000000058 INF: ===================Camera #0 Frame #223===================
17-02-28 20:08:31.034 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:31.052 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:08:31.052 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:08:31.052 -08 000000039 INF: ===================Camera #2 Frame #225===================
17-02-28 20:08:31.160 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:31.191 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:08:31.191 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:08:31.191 -08 000000058 INF: ===================Camera #0 Frame #230===================
17-02-28 20:08:31.226 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:08:31.226 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:08:31.226 -08 000000039 INF: ===================Camera #2 Frame #231===================
17-02-28 20:08:31.298 -08 000000102 INF: Y Motor: Unshifted Position: 1836912
17-02-28 20:08:31.348 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:31.365 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:08:31.365 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:08:31.365 -08 000000058 INF: ===================Camera #0 Frame #236===================
17-02-28 20:08:31.397 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:08:31.397 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:08:31.397 -08 000000039 INF: ===================Camera #2 Frame #237===================
17-02-28 20:08:31.473 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:31.535 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:08:31.535 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:08:31.535 -08 000000058 INF: ===================Camera #0 Frame #242===================
17-02-28 20:08:31.568 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:08:31.568 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:08:31.568 -08 000000039 INF: ===================Camera #2 Frame #244===================
17-02-28 20:08:31.609 -08 000000102 INF: Y Motor: Unshifted Position: 1634538
17-02-28 20:08:31.659 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:31.705 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:08:31.705 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:08:31.705 -08 000000058 INF: ===================Camera #0 Frame #249===================
17-02-28 20:08:31.742 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:08:31.742 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:08:31.742 -08 000000039 INF: ===================Camera #2 Frame #250===================
17-02-28 20:08:31.785 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:31.879 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:08:31.879 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:08:31.879 -08 000000058 INF: ===================Camera #0 Frame #255===================
17-02-28 20:08:31.913 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:08:31.913 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:08:31.913 -08 000000039 INF: ===================Camera #2 Frame #256===================
17-02-28 20:08:31.920 -08 000000102 INF: Y Motor: Unshifted Position: 1432392
17-02-28 20:08:31.970 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:32.049 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:08:32.049 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:08:32.049 -08 000000058 INF: ===================Camera #0 Frame #261===================
17-02-28 20:08:32.084 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:08:32.084 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:08:32.084 -08 000000039 INF: ===================Camera #2 Frame #263===================
17-02-28 20:08:32.096 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:32.219 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:08:32.219 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:08:32.219 -08 000000058 INF: ===================Camera #0 Frame #268===================
17-02-28 20:08:32.234 -08 000000102 INF: Y Motor: Unshifted Position: 1228273
17-02-28 20:08:32.258 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:08:32.258 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:08:32.258 -08 000000039 INF: ===================Camera #2 Frame #269===================
17-02-28 20:08:32.284 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:32.340 -08 000000104 INF: FPGA: Recv TDIYWAIT
17-02-28 20:08:32.340 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:32.342 -08 000000064 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:08:32.343 -08 000000030 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:08:32.343 -08 000000092 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:08:32.343 -08 000000030 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:08:32.343 -08 000000030 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:08:32.343 -08 000000030 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:08:32.343 -08 000000092 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:08:32.343 -08 000000092 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:08:32.343 -08 000000092 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:08:32.343 -08 000000030 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:08:32.344 -08 000000092 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:08:32.392 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:08:32.392 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:08:32.392 -08 000000058 INF: ===================Camera #0 Frame #272===================
17-02-28 20:08:32.405 -08 000000058 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:08:32.406 -08 000000058 INF: ===================CameraTDI Cleanup===================
17-02-28 20:08:32.407 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:32.545 -08 000000102 INF: Y Motor: Unshifted Position: 1025913
17-02-28 20:08:32.571 -08 000000058 INF: Camera #0 ReleaseBuffer
17-02-28 20:08:32.571 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:08:32.571 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:08:32.571 -08 000000039 INF: ===================Camera #2 Frame #272===================
17-02-28 20:08:32.571 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:08:32.580 -08 000000039 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:08:32.581 -08 000000039 INF: ===================CameraTDI Cleanup===================
17-02-28 20:08:32.595 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:32.601 -08 000000058 INF: ======================================
17-02-28 20:08:32.714 -08 000000052 INF: FPGA: Recv EX1MV
17-02-28 20:08:32.714 -08 000000052 INF: FPGA: Recv EX2MV
17-02-28 20:08:32.714 -08 000000092 INF: Excitation Filter 2: Moved 107 steps in 370.6274 ms
17-02-28 20:08:32.714 -08 000000092 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.7357 ms
17-02-28 20:08:32.714 -08 000000092 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.808 ms
17-02-28 20:08:32.714 -08 000000030 INF: Excitation Filter 1: Moved 107 steps in 370.8042 ms
17-02-28 20:08:32.714 -08 000000030 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.2106 ms
17-02-28 20:08:32.714 -08 000000030 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.2843 ms
17-02-28 20:08:32.714 -08 000000092 INF: ======================================
17-02-28 20:08:32.715 -08 000000030 INF: ======================================
17-02-28 20:08:32.716 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:32.717 -08 000000064 INF: ======================================
17-02-28 20:08:32.731 -08 000000102 INF: Y Motor: Unshifted Position: 992959
17-02-28 20:08:32.731 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:08:32.731 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:32.772 -08 000000039 INF: Camera #2 ReleaseBuffer
17-02-28 20:08:32.772 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:08:32.795 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:08:32.795 -08 000000102 INF: Y Motor: Moved to 14.9296 after 7862 ms
17-02-28 20:08:32.795 -08 000000102 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:08:32.803 -08 000000039 INF: ======================================
17-02-28 20:08:32.804 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:08:32.805 -08 000000032 INF: ======================================
17-02-28 20:08:32.857 -08 000000102 INF: Y Motor: Recv v 4097\r
17-02-28 20:08:32.857 -08 000000102 INF: Y Motor: Status After move finished OK:
17-02-28 20:08:32.857 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:32.919 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:08:32.919 -08 000000102 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:32.919 -08 000000102 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:08:32.983 -08 000000102 INF: Y Motor: Recv v 134217728\r
17-02-28 20:08:32.983 -08 000000102 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:08:32.983 -08 000000102 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:08:32.983 -08 000000102 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:08:33.045 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:08:33.045 -08 000000102 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:08:33.045 -08 000000102 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:08:33.045 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:33.106 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:08:33.106 -08 000000102 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:08:33.106 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:33.168 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:08:33.168 -08 000000102 INF: ======================================
17-02-28 20:08:33.169 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:33.170 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:33.171 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:33.171 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:08:33.215 -08 000000074 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:08:33.215 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:08:33.278 -08 000000085 INF: FPGA: Recv TDIYERD 1492961
17-02-28 20:08:33.278 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:08:33.339 -08 000000102 INF: FPGA: Recv ZADCR 20831
17-02-28 20:08:33.339 -08 000000042 INF: At scan end Y pos = 14.930 and Z pos = -0.080. Y moved -48.539 mm
17-02-28 20:08:33.339 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:08:33.400 -08 000000095 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:08:33.400 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:08:33.400 -08 000000042 INF: TDIScan finished after 11825.7813 ms
17-02-28 20:08:33.400 -08 000000042 INF: Image[0]: Y should trigger at 63.469 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:08:33.400 -08 000000042 INF: Image[2]: Y should trigger at 63.469 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:08:33.402 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:33.437 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.555 um
17-02-28 20:08:33.437 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:33.438 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:08:33.465 -08 000000067 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:08:33.466 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:33.466 -08 000000092 INF: ===================Dither Clean Up Command===================
17-02-28 20:08:33.466 -08 000000068 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:08:33.466 -08 000000072 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:08:33.467 -08 000000102 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:08:33.467 -08 000000072 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:08:33.467 -08 000000072 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:08:33.467 -08 000000068 INF: ======================================
17-02-28 20:08:33.467 -08 000000102 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:08:33.467 -08 000000102 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:08:33.467 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:08:33.467 -08 000000044 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:08:33.467 -08 000000044 INF: ======================================
17-02-28 20:08:33.470 -08 000000058 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:08:33.526 -08 000000045 INF: FPGA: Recv ZSTEP 
17-02-28 20:08:33.526 -08 000000045 INF: FPGA: Recv ZSEL 
17-02-28 20:08:33.526 -08 000000058 INF: FPGA: Xmit ZDACW 26921\n
17-02-28 20:08:33.526 -08 000000102 INF: ======================================
17-02-28 20:08:33.544 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:08:33.544 -08 000000072 INF: ======================================
17-02-28 20:08:33.588 -08 000000069 INF: FPGA: Recv ZDACW 
17-02-28 20:08:33.588 -08 000000058 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:08:33.589 -08 000000058 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:08:33.650 -08 000000097 INF: FPGA: Recv TDIBB
17-02-28 20:08:33.651 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:08:33.652 -08 000000058 INF: ======================================
17-02-28 20:08:33.653 -08 000000092 INF: ======================================
17-02-28 20:08:33.654 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:33.655 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:08:33.655 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:33.655 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:08:33.656 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:33.656 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:08:33.656 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:33.656 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:08:33.656 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:33.656 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827===================
17-02-28 20:08:33.656 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827===================
17-02-28 20:08:33.657 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:08:33.657 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:08:33.658 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:08:33.658 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827===================
17-02-28 20:08:33.681 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:08:33.681 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:33.681 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827===================
17-02-28 20:08:33.681 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:33.681 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827===================
17-02-28 20:08:33.682 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:08:33.682 -08 000000042 INF: Transformed XStagePosition from 72.50118 mm to 72.4784125555307 mm.
17-02-28 20:08:33.789 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2110 Request: {"Cycle":2,"Lane":2,"Tile":2110,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF199","HCSMMF241","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.807 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.577932801506 mm.
17-02-28 20:08:33.807 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.377932801506 mm.
17-02-28 20:08:33.807 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.468682801506 mm.
17-02-28 20:08:33.810 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:33.810 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:08:33.810 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:33.810 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -102.7 um, section = B_1
17-02-28 20:08:33.812 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:33.812 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:33.827 -08 000000051 INF: ===================Move X,Y===================
17-02-28 20:08:33.827 -08 000000051 INF: ===================Move X,Y, Parallel===================
17-02-28 20:08:33.828 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:08:33.830 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:08:33.830 -08 000000050 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:08:33.830 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:08:33.833 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:08:33.836 -08 000000032 INF: ===================Move X Motor without settling===================
17-02-28 20:08:33.836 -08 000000032 INF: X Motor: Xmit PR VM\n
17-02-28 20:08:33.840 -08 000000099 INF: ===================Camera Arm TDI===================
17-02-28 20:08:33.841 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:08:33.842 -08 000000100 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:33.843 -08 000000081 INF: ===================MoveEmissionFilters===================
17-02-28 20:08:33.843 -08 000000100 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:08:33.843 -08 000000100 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:08:33.844 -08 000000100 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:08:33.845 -08 000000099 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:08:33.846 -08 000000099 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:08:33.848 -08 000000020 INF: ===================Move Y Motor without settling===================
17-02-28 20:08:33.848 -08 000000020 INF: Y Motor: Moving to 64.5779 mm @25.000 mm/sec, started at 14.9296 mm
17-02-28 20:08:33.849 -08 000000020 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:08:33.849 -08 000000020 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:33.852 -08 000000044 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:08:33.853 -08 000000044 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:08:33.853 -08 000000095 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:08:33.854 -08 000000095 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:08:33.858 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:08:33.859 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:08:33.860 -08 000000088 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:08:33.860 -08 000000088 INF: ======================================
17-02-28 20:08:33.863 -08 000000104 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:08:33.864 -08 000000104 INF: ======================================
17-02-28 20:08:33.865 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2113 Request: {"Cycle":2,"Lane":2,"Tile":2113,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF282","HCSMMF205","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.875 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2101 Request: {"Cycle":2,"Lane":2,"Tile":2101,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF220","HCSMMF221","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.876 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:08:33.876 -08 000000085 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:08:33.877 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2115 Request: {"Cycle":2,"Lane":2,"Tile":2115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF283","HCSMMF176","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.877 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:08:33.877 -08 000000085 INF: ======================================
17-02-28 20:08:33.878 -08 000000088 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:08:33.878 -08 000000102 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:08:33.878 -08 000000104 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:08:33.878 -08 000000088 INF: ======================================
17-02-28 20:08:33.878 -08 000000104 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:08:33.878 -08 000000078 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:08:33.879 -08 000000067 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:08:33.879 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2107 Request: {"Cycle":2,"Lane":2,"Tile":2107,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF276","HCSMMF209","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.879 -08 000000104 INF: ======================================
17-02-28 20:08:33.879 -08 000000067 INF: ======================================
17-02-28 20:08:33.879 -08 000000044 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:08:33.879 -08 000000078 INF: ======================================
17-02-28 20:08:33.880 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2102 Request: {"Cycle":2,"Lane":2,"Tile":2102,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF237","HCSMMF219","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.880 -08 000000095 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:08:33.880 -08 000000044 INF: ======================================
17-02-28 20:08:33.881 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2109 Request: {"Cycle":2,"Lane":2,"Tile":2109,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF204","HCSMMF235","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.881 -08 000000102 INF: ======================================
17-02-28 20:08:33.881 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:08:33.882 -08 000000095 INF: ======================================
17-02-28 20:08:33.882 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:08:33.883 -08 000000101 INF: ======================================
17-02-28 20:08:33.884 -08 000000086 INF: ======================================
17-02-28 20:08:33.885 -08 000000081 INF: ======================================
17-02-28 20:08:33.888 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2124 Request: {"Cycle":2,"Lane":2,"Tile":2124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF243","HCSMMF202","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.894 -08 000000103 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2120 Request: {"Cycle":2,"Lane":2,"Tile":2120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF217","HCSMMF263","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.897 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2103 Request: {"Cycle":2,"Lane":2,"Tile":2103,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF197","HCSMMF214","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.898 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2108 Request: {"Cycle":2,"Lane":2,"Tile":2108,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF287","HCSMMF218","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.899 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2121 Request: {"Cycle":2,"Lane":2,"Tile":2121,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF225","HCSMMF245","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.905 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2119 Request: {"Cycle":2,"Lane":2,"Tile":2119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF189","HCSMMF212","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.907 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2118 Request: {"Cycle":2,"Lane":2,"Tile":2118,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF277","HCSMMF192","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.907 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2104 Request: {"Cycle":2,"Lane":2,"Tile":2104,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF256","HCSMMF270","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.908 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2128 Request: {"Cycle":2,"Lane":2,"Tile":2128,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF208","HCSMMF246","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.909 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2111 Request: {"Cycle":2,"Lane":2,"Tile":2111,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF239","HCSMMF193","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.910 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2105 Request: {"Cycle":2,"Lane":2,"Tile":2105,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF213","HCSMMF180","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.910 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2106 Request: {"Cycle":2,"Lane":2,"Tile":2106,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF240","HCSMMF281","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.911 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2125 Request: {"Cycle":2,"Lane":2,"Tile":2125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF188","HCSMMF196","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.912 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2122 Request: {"Cycle":2,"Lane":2,"Tile":2122,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF265","HCSMMF186","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.913 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2126 Request: {"Cycle":2,"Lane":2,"Tile":2126,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF230","HCSMMF203","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.913 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2114 Request: {"Cycle":2,"Lane":2,"Tile":2114,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF179","HCSMMF285","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.914 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2117 Request: {"Cycle":2,"Lane":2,"Tile":2117,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF226","HCSMMF254","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.915 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2116 Request: {"Cycle":2,"Lane":2,"Tile":2116,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF234","HCSMMF271","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.916 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2127 Request: {"Cycle":2,"Lane":2,"Tile":2127,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF206","HCSMMF269","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.917 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2123 Request: {"Cycle":2,"Lane":2,"Tile":2123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF181","HCSMMF259","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.918 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2112 Request: {"Cycle":2,"Lane":2,"Tile":2112,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF177","HCSMMF258","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:33.920 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:33.927 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:08:33.932 -08 000000039 INF: FPGA: Recv ZSEL 
17-02-28 20:08:33.933 -08 000000100 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:08:33.933 -08 000000100 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:08:33.934 -08 000000020 INF: Y Motor: Recv ok\r
17-02-28 20:08:33.934 -08 000000020 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:08:33.934 -08 000000020 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:33.934 -08 000000032 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:08:33.934 -08 000000032 INF: X Motor: Xmit PR VI\n
17-02-28 20:08:33.993 -08 000000094 INF: FPGA: Recv TDIBB
17-02-28 20:08:33.993 -08 000000100 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:08:33.995 -08 000000020 INF: Y Motor: Recv ok\r
17-02-28 20:08:33.995 -08 000000100 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:08:33.995 -08 000000020 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:33.995 -08 000000032 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:08:33.995 -08 000000100 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:33.995 -08 000000032 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:08:33.995 -08 000000032 INF: X Motor: Moving to 72.4784 mm @15.000 mm/sec, started at 71.3779 mm
17-02-28 20:08:33.995 -08 000000032 INF: X Motor: Xmit MA 5521\n
17-02-28 20:08:33.997 -08 000000100 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:08:33.997 -08 000000100 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:08:33.997 -08 000000100 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:08:34.008 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:34.008 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:08:34.046 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:34.052 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:08:34.055 -08 000000023 INF: FPGA: Recv ZSTEP 
17-02-28 20:08:34.055 -08 000000100 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:34.057 -08 000000032 INF: X Motor: Recv MA 5521\r\n>
17-02-28 20:08:34.057 -08 000000032 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:08:34.057 -08 000000100 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:08:34.057 -08 000000100 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:34.058 -08 000000020 INF: Y Motor: Recv v 0\r
17-02-28 20:08:34.058 -08 000000020 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:34.058 -08 000000020 INF: Y Motor: Set target position to 5957793 encoder counts
17-02-28 20:08:34.058 -08 000000020 INF: Y Motor: Xmit s r0xca 5957793\r
17-02-28 20:08:34.059 -08 000000100 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:08:34.059 -08 000000100 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:08:34.059 -08 000000100 INF: Z Motor: Arming to move to -0.0627 mm
17-02-28 20:08:34.059 -08 000000100 INF: FPGA: Xmit ZYT 6437793 4\n
17-02-28 20:08:34.120 -08 000000086 INF: FPGA: Recv ZYT 
17-02-28 20:08:34.120 -08 000000100 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492959 enc / 14.930 mm / ) = 6437793 enc / 64.378 mm
17-02-28 20:08:34.120 -08 000000100 INF: FPGA: Xmit ZARM 16436\n
17-02-28 20:08:34.122 -08 000000020 INF: Y Motor: Recv ok\r
17-02-28 20:08:34.122 -08 000000020 INF: Y Motor: Start the move command
17-02-28 20:08:34.122 -08 000000020 INF: Y Motor: Xmit t 1\r
17-02-28 20:08:34.162 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:34.168 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:08:34.181 -08 000000062 INF: FPGA: Recv ZARM
17-02-28 20:08:34.181 -08 000000100 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.8487 ms
17-02-28 20:08:34.181 -08 000000100 INF: Z Motor: ArmAbsStepped took 121.6615 ms
17-02-28 20:08:34.181 -08 000000100 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:34.183 -08 000000020 INF: Y Motor: Recv ok\r
17-02-28 20:08:34.183 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:08:34.183 -08 000000020 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:08:34.183 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:34.184 -08 000000100 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:08:34.185 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:08:34.186 -08 000000100 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:08:34.186 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:08:34.188 -08 000000100 INF: ======================================
17-02-28 20:08:34.267 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:34.273 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:08:34.309 -08 000000020 INF: Y Motor: Unshifted Position: 1075716
17-02-28 20:08:34.359 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:34.379 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:34.435 -08 000000099 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:08:34.435 -08 000000099 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:08:34.436 -08 000000099 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:08:34.450 -08 000000099 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:08:34.452 -08 000000099 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:08:34.483 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:34.620 -08 000000020 INF: Y Motor: Unshifted Position: 1782126
17-02-28 20:08:34.666 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:08:34.670 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:34.682 -08 000000032 INF: X Motor: Xmit PR ER\n
17-02-28 20:08:34.744 -08 000000032 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:08:34.744 -08 000000032 INF: X Motor: Moved to 72.4790 after 687 ms
17-02-28 20:08:34.744 -08 000000032 INF: ======================================
17-02-28 20:08:34.794 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:34.932 -08 000000020 INF: Y Motor: Unshifted Position: 2562980
17-02-28 20:08:34.982 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:35.052 -08 000000099 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:08:35.052 -08 000000099 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:08:35.052 -08 000000099 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:08:35.067 -08 000000099 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:08:35.069 -08 000000099 INF: ===================Camera Arm TDI===================
17-02-28 20:08:35.070 -08 000000099 INF: ======================================
17-02-28 20:08:35.071 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:08:35.072 -08 000000050 INF: ======================================
17-02-28 20:08:35.106 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:35.243 -08 000000020 INF: Y Motor: Unshifted Position: 3340421
17-02-28 20:08:35.293 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:35.420 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:35.557 -08 000000020 INF: Y Motor: Unshifted Position: 4118829
17-02-28 20:08:35.607 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:35.731 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:35.867 -08 000000020 INF: Y Motor: Unshifted Position: 4903760
17-02-28 20:08:35.917 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:36.044 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:36.181 -08 000000020 INF: Y Motor: Unshifted Position: 5683177
17-02-28 20:08:36.232 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:36.356 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:36.493 -08 000000020 INF: Y Motor: Unshifted Position: 5957795
17-02-28 20:08:36.493 -08 000000020 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:08:36.493 -08 000000020 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:36.555 -08 000000020 INF: Y Motor: Recv v 0\r
17-02-28 20:08:36.555 -08 000000020 INF: Y Motor: Moved to 64.5780 after 2371 ms
17-02-28 20:08:36.555 -08 000000020 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:08:36.617 -08 000000020 INF: Y Motor: Recv v 4096\r
17-02-28 20:08:36.617 -08 000000020 INF: Y Motor: Status After move finished OK:
17-02-28 20:08:36.617 -08 000000020 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:36.684 -08 000000020 INF: Y Motor: Recv v 0\r
17-02-28 20:08:36.684 -08 000000020 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:36.684 -08 000000020 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:08:36.743 -08 000000020 INF: Y Motor: Recv v 402653184\r
17-02-28 20:08:36.743 -08 000000020 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:08:36.743 -08 000000020 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:08:36.743 -08 000000020 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:08:36.804 -08 000000020 INF: Y Motor: Recv v 0\r
17-02-28 20:08:36.804 -08 000000020 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:08:36.804 -08 000000020 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:08:36.804 -08 000000020 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:36.866 -08 000000020 INF: Y Motor: Recv ok\r
17-02-28 20:08:36.866 -08 000000020 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:08:36.866 -08 000000020 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:36.931 -08 000000020 INF: Y Motor: Recv ok\r
17-02-28 20:08:36.931 -08 000000020 INF: ======================================
17-02-28 20:08:36.932 -08 000000051 INF: ===================Move X,Y===================
17-02-28 20:08:36.933 -08 000000051 INF: ======================================
17-02-28 20:08:36.934 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:36.935 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:36.935 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:08:36.935 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:08:36.992 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:08:36.992 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:08:37.052 -08 000000040 INF: FPGA: Recv ZFREQCL
17-02-28 20:08:37.052 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:08:37.052 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:37.053 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:08:37.116 -08 000000037 INF: FPGA: Recv TDIYERD 6457794
17-02-28 20:08:37.116 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457794 counts (64.578 mm)
17-02-28 20:08:37.116 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:37.117 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:37.118 -08 000000058 INF: ===================TDI FPGA Arm===================
17-02-28 20:08:37.118 -08 000000035 INF: ===================Set YMotor gains for scans===================
17-02-28 20:08:37.118 -08 000000035 INF: ======================================
17-02-28 20:08:37.118 -08 000000058 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:08:37.119 -08 000000058 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:08:37.119 -08 000000058 INF: FPGA: Xmit TDIYPOS 6346868\n
17-02-28 20:08:37.178 -08 000000085 INF: FPGA: Recv TDIYPOS
17-02-28 20:08:37.178 -08 000000058 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:08:37.180 -08 000000058 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:08:37.180 -08 000000058 INF: FPGA: Xmit TDIYARM3 139264 6437793 1 1\n
17-02-28 20:08:37.241 -08 000000083 INF: FPGA: Recv TDIYARM3
17-02-28 20:08:37.241 -08 000000058 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:08:37.242 -08 000000058 INF: ===================TDI FPGA Arm===================
17-02-28 20:08:37.243 -08 000000058 INF: ======================================
17-02-28 20:08:37.244 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:37.245 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:37.245 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:37.246 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:37.246 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:37.247 -08 000000020 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:08:37.247 -08 000000077 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:08:37.247 -08 000000020 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:08:37.247 -08 000000020 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:08:37.247 -08 000000020 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:08:37.247 -08 000000020 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:08:37.247 -08 000000077 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:08:37.247 -08 000000077 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:08:37.247 -08 000000077 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:08:37.250 -08 000000077 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:08:37.616 -08 000000032 INF: FPGA: Recv EX2MV
17-02-28 20:08:37.616 -08 000000032 INF: FPGA: Recv EX1MV
17-02-28 20:08:37.616 -08 000000020 INF: Excitation Filter 2: Moved -107 steps in 368.5117 ms
17-02-28 20:08:37.616 -08 000000077 INF: Excitation Filter 1: Moved -107 steps in 368.3753 ms
17-02-28 20:08:37.616 -08 000000077 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.5695 ms
17-02-28 20:08:37.616 -08 000000077 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.6554 ms
17-02-28 20:08:37.616 -08 000000020 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.6406 ms
17-02-28 20:08:37.616 -08 000000020 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.025 ms
17-02-28 20:08:37.617 -08 000000077 INF: ======================================
17-02-28 20:08:37.617 -08 000000020 INF: ======================================
17-02-28 20:08:37.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:37.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:37.620 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:08:37.620 -08 000000088 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:37.620 -08 000000083 INF: ===================FPGA Z Wait===================
17-02-28 20:08:37.620 -08 000000059 INF: ===================Move Y Motor without settling===================
17-02-28 20:08:37.620 -08 000000059 INF: Y Motor: Moving to 14.9296 mm @6.500 mm/sec, started at 64.5780 mm
17-02-28 20:08:37.620 -08 000000059 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:08:37.620 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:37.620 -08 000000045 INF: ===================Camera TDI, Parallel===================
17-02-28 20:08:37.621 -08 000000088 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:08:37.621 -08 000000088 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:08:37.621 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:08:37.621 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:08:37.622 -08 000000083 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:08:37.623 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:37.623 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:37.624 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:37.624 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:37.679 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:08:37.679 -08 000000059 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:08:37.679 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:37.740 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:08:37.740 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:37.773 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:37.773 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:37.774 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:37.774 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:37.802 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:08:37.802 -08 000000059 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:37.802 -08 000000059 INF: Y Motor: Set target position to 992960 encoder counts
17-02-28 20:08:37.802 -08 000000059 INF: Y Motor: Xmit s r0xca 992960\r
17-02-28 20:08:37.867 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:08:37.867 -08 000000059 INF: Y Motor: Start the move command
17-02-28 20:08:37.867 -08 000000059 INF: Y Motor: Xmit t 1\r
17-02-28 20:08:37.923 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:37.923 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:37.924 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:37.924 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:37.929 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:08:37.929 -08 000000059 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:08:37.929 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:37.989 -08 000000054 INF: FPGA: Recv ZWAIT 
17-02-28 20:08:37.989 -08 000000083 INF: ======================================
17-02-28 20:08:38.052 -08 000000059 INF: Y Motor: Unshifted Position: 5895944
17-02-28 20:08:38.073 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:08:38.073 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:08:38.073 -08 000000050 INF: ===================Camera #2 Frame #5===================
17-02-28 20:08:38.074 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:08:38.074 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:08:38.074 -08 000000081 INF: ===================Camera #0 Frame #5===================
17-02-28 20:08:38.102 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:38.229 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:38.239 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:08:38.239 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:08:38.239 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:08:38.239 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:08:38.239 -08 000000050 INF: ===================Camera #2 Frame #11===================
17-02-28 20:08:38.239 -08 000000081 INF: ===================Camera #0 Frame #11===================
17-02-28 20:08:38.366 -08 000000059 INF: Y Motor: Unshifted Position: 5693140
17-02-28 20:08:38.407 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:08:38.407 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:08:38.407 -08 000000081 INF: ===================Camera #0 Frame #17===================
17-02-28 20:08:38.408 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:08:38.408 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:08:38.408 -08 000000050 INF: ===================Camera #2 Frame #17===================
17-02-28 20:08:38.416 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:38.542 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:38.576 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:08:38.576 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:08:38.576 -08 000000081 INF: ===================Camera #0 Frame #23===================
17-02-28 20:08:38.577 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:08:38.577 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:08:38.577 -08 000000050 INF: ===================Camera #2 Frame #23===================
17-02-28 20:08:38.677 -08 000000059 INF: Y Motor: Unshifted Position: 5489477
17-02-28 20:08:38.727 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:38.744 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:08:38.744 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:08:38.744 -08 000000081 INF: ===================Camera #0 Frame #29===================
17-02-28 20:08:38.746 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:08:38.746 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:08:38.746 -08 000000050 INF: ===================Camera #2 Frame #29===================
17-02-28 20:08:38.851 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:38.913 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:08:38.913 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:08:38.913 -08 000000081 INF: ===================Camera #0 Frame #35===================
17-02-28 20:08:38.915 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:08:38.915 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:08:38.915 -08 000000050 INF: ===================Camera #2 Frame #36===================
17-02-28 20:08:38.989 -08 000000059 INF: Y Motor: Unshifted Position: 5288626
17-02-28 20:08:39.039 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:39.081 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:08:39.081 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:08:39.081 -08 000000081 INF: ===================Camera #0 Frame #42===================
17-02-28 20:08:39.087 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:08:39.087 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:08:39.087 -08 000000050 INF: ===================Camera #2 Frame #42===================
17-02-28 20:08:39.163 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:39.255 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:08:39.255 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:08:39.255 -08 000000081 INF: ===================Camera #0 Frame #48===================
17-02-28 20:08:39.258 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:08:39.258 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:08:39.258 -08 000000050 INF: ===================Camera #2 Frame #48===================
17-02-28 20:08:39.300 -08 000000059 INF: Y Motor: Unshifted Position: 5084309
17-02-28 20:08:39.350 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:39.425 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:08:39.425 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:08:39.425 -08 000000081 INF: ===================Camera #0 Frame #54===================
17-02-28 20:08:39.428 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:08:39.428 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:08:39.428 -08 000000050 INF: ===================Camera #2 Frame #54===================
17-02-28 20:08:39.474 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:39.593 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:08:39.593 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:08:39.593 -08 000000081 INF: ===================Camera #0 Frame #61===================
17-02-28 20:08:39.597 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:08:39.597 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:08:39.597 -08 000000050 INF: ===================Camera #2 Frame #61===================
17-02-28 20:08:39.614 -08 000000059 INF: Y Motor: Unshifted Position: 4882157
17-02-28 20:08:39.664 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:39.766 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:08:39.766 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:08:39.766 -08 000000081 INF: ===================Camera #0 Frame #67===================
17-02-28 20:08:39.770 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:08:39.770 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:08:39.770 -08 000000050 INF: ===================Camera #2 Frame #67===================
17-02-28 20:08:39.788 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:39.926 -08 000000059 INF: Y Motor: Unshifted Position: 4679788
17-02-28 20:08:39.936 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:08:39.936 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:08:39.936 -08 000000081 INF: ===================Camera #0 Frame #73===================
17-02-28 20:08:39.940 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:08:39.940 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:08:39.940 -08 000000050 INF: ===================Camera #2 Frame #73===================
17-02-28 20:08:39.976 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:40.100 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:40.104 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:08:40.104 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:08:40.104 -08 000000081 INF: ===================Camera #0 Frame #79===================
17-02-28 20:08:40.109 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:08:40.109 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:08:40.109 -08 000000050 INF: ===================Camera #2 Frame #80===================
17-02-28 20:08:40.237 -08 000000059 INF: Y Motor: Unshifted Position: 4476979
17-02-28 20:08:40.272 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:08:40.272 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:08:40.272 -08 000000081 INF: ===================Camera #0 Frame #86===================
17-02-28 20:08:40.282 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:08:40.282 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:08:40.282 -08 000000050 INF: ===================Camera #2 Frame #86===================
17-02-28 20:08:40.287 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:40.411 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:40.445 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:08:40.445 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:08:40.445 -08 000000081 INF: ===================Camera #0 Frame #92===================
17-02-28 20:08:40.452 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:08:40.452 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:08:40.452 -08 000000050 INF: ===================Camera #2 Frame #92===================
17-02-28 20:08:40.548 -08 000000059 INF: Y Motor: Unshifted Position: 4272664
17-02-28 20:08:40.598 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:40.615 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:08:40.615 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:08:40.615 -08 000000081 INF: ===================Camera #0 Frame #98===================
17-02-28 20:08:40.622 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:08:40.622 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:08:40.622 -08 000000050 INF: ===================Camera #2 Frame #98===================
17-02-28 20:08:40.722 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:40.785 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:08:40.785 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:08:40.785 -08 000000081 INF: ===================Camera #0 Frame #104===================
17-02-28 20:08:40.793 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:08:40.793 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:08:40.793 -08 000000050 INF: ===================Camera #2 Frame #105===================
17-02-28 20:08:40.862 -08 000000059 INF: Y Motor: Unshifted Position: 4070295
17-02-28 20:08:40.912 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:40.955 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:08:40.955 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:08:40.955 -08 000000081 INF: ===================Camera #0 Frame #111===================
17-02-28 20:08:40.967 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:08:40.967 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:08:40.967 -08 000000050 INF: ===================Camera #2 Frame #111===================
17-02-28 20:08:41.034 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:41.128 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:08:41.128 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:08:41.128 -08 000000081 INF: ===================Camera #0 Frame #117===================
17-02-28 20:08:41.137 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:08:41.137 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:08:41.137 -08 000000050 INF: ===================Camera #2 Frame #117===================
17-02-28 20:08:41.174 -08 000000059 INF: Y Motor: Unshifted Position: 3867493
17-02-28 20:08:41.224 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:41.298 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:08:41.298 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:08:41.298 -08 000000081 INF: ===================Camera #0 Frame #123===================
17-02-28 20:08:41.307 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:08:41.307 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:08:41.307 -08 000000050 INF: ===================Camera #2 Frame #124===================
17-02-28 20:08:41.348 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:41.468 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:08:41.468 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:08:41.468 -08 000000081 INF: ===================Camera #0 Frame #130===================
17-02-28 20:08:41.481 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:08:41.481 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:08:41.481 -08 000000050 INF: ===================Camera #2 Frame #130===================
17-02-28 20:08:41.485 -08 000000059 INF: Y Motor: Unshifted Position: 3665123
17-02-28 20:08:41.535 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:41.641 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:08:41.641 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:08:41.641 -08 000000081 INF: ===================Camera #0 Frame #136===================
17-02-28 20:08:41.651 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:08:41.651 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:08:41.651 -08 000000050 INF: ===================Camera #2 Frame #136===================
17-02-28 20:08:41.659 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:41.796 -08 000000059 INF: Y Motor: Unshifted Position: 3461031
17-02-28 20:08:41.811 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:08:41.811 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:08:41.811 -08 000000081 INF: ===================Camera #0 Frame #142===================
17-02-28 20:08:41.822 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:08:41.822 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:08:41.822 -08 000000050 INF: ===================Camera #2 Frame #143===================
17-02-28 20:08:41.846 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:41.971 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:41.981 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:08:41.981 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:08:41.981 -08 000000081 INF: ===================Camera #0 Frame #148===================
17-02-28 20:08:41.996 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:08:41.996 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:08:41.996 -08 000000050 INF: ===================Camera #2 Frame #149===================
17-02-28 20:08:42.108 -08 000000059 INF: Y Motor: Unshifted Position: 3258013
17-02-28 20:08:42.151 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:08:42.151 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:08:42.151 -08 000000081 INF: ===================Camera #0 Frame #155===================
17-02-28 20:08:42.158 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:42.167 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:08:42.167 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:08:42.167 -08 000000050 INF: ===================Camera #2 Frame #155===================
17-02-28 20:08:42.282 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:42.324 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:08:42.324 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:08:42.324 -08 000000081 INF: ===================Camera #0 Frame #161===================
17-02-28 20:08:42.338 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:08:42.338 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:08:42.338 -08 000000050 INF: ===================Camera #2 Frame #162===================
17-02-28 20:08:42.422 -08 000000059 INF: Y Motor: Unshifted Position: 3055868
17-02-28 20:08:42.472 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:42.494 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:08:42.494 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:08:42.494 -08 000000081 INF: ===================Camera #0 Frame #167===================
17-02-28 20:08:42.512 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:08:42.512 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:08:42.512 -08 000000050 INF: ===================Camera #2 Frame #168===================
17-02-28 20:08:42.596 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:42.664 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:08:42.664 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:08:42.664 -08 000000081 INF: ===================Camera #0 Frame #174===================
17-02-28 20:08:42.682 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:08:42.682 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:08:42.682 -08 000000050 INF: ===================Camera #2 Frame #174===================
17-02-28 20:08:42.733 -08 000000059 INF: Y Motor: Unshifted Position: 2853504
17-02-28 20:08:42.783 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:42.837 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:08:42.837 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:08:42.837 -08 000000081 INF: ===================Camera #0 Frame #180===================
17-02-28 20:08:42.852 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:08:42.852 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:08:42.852 -08 000000050 INF: ===================Camera #2 Frame #181===================
17-02-28 20:08:42.907 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:43.007 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:08:43.007 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:08:43.007 -08 000000081 INF: ===================Camera #0 Frame #186===================
17-02-28 20:08:43.026 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:08:43.026 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:08:43.026 -08 000000050 INF: ===================Camera #2 Frame #187===================
17-02-28 20:08:43.045 -08 000000059 INF: Y Motor: Unshifted Position: 2650708
17-02-28 20:08:43.095 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:43.177 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:08:43.177 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:08:43.177 -08 000000081 INF: ===================Camera #0 Frame #192===================
17-02-28 20:08:43.196 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:08:43.196 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:08:43.196 -08 000000050 INF: ===================Camera #2 Frame #193===================
17-02-28 20:08:43.219 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:43.346 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:08:43.346 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:08:43.346 -08 000000081 INF: ===================Camera #0 Frame #199===================
17-02-28 20:08:43.356 -08 000000059 INF: Y Motor: Unshifted Position: 2446393
17-02-28 20:08:43.365 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:08:43.365 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:08:43.365 -08 000000050 INF: ===================Camera #2 Frame #199===================
17-02-28 20:08:43.406 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:43.517 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:08:43.517 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:08:43.517 -08 000000081 INF: ===================Camera #0 Frame #205===================
17-02-28 20:08:43.530 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:43.534 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:08:43.534 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:08:43.534 -08 000000050 INF: ===================Camera #2 Frame #206===================
17-02-28 20:08:43.667 -08 000000059 INF: Y Motor: Unshifted Position: 2244245
17-02-28 20:08:43.687 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:08:43.687 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:08:43.687 -08 000000081 INF: ===================Camera #0 Frame #211===================
17-02-28 20:08:43.708 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:08:43.708 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:08:43.708 -08 000000050 INF: ===================Camera #2 Frame #212===================
17-02-28 20:08:43.717 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:43.844 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:43.857 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:08:43.857 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:08:43.857 -08 000000081 INF: ===================Camera #0 Frame #218===================
17-02-28 20:08:43.879 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:08:43.879 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:08:43.879 -08 000000050 INF: ===================Camera #2 Frame #218===================
17-02-28 20:08:43.979 -08 000000059 INF: Y Motor: Unshifted Position: 2041875
17-02-28 20:08:44.029 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:44.030 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:08:44.030 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:08:44.030 -08 000000081 INF: ===================Camera #0 Frame #224===================
17-02-28 20:08:44.050 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:08:44.050 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:08:44.050 -08 000000050 INF: ===================Camera #2 Frame #225===================
17-02-28 20:08:44.156 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:44.200 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:08:44.200 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:08:44.200 -08 000000081 INF: ===================Camera #0 Frame #230===================
17-02-28 20:08:44.224 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:08:44.224 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:08:44.224 -08 000000050 INF: ===================Camera #2 Frame #231===================
17-02-28 20:08:44.293 -08 000000059 INF: Y Motor: Unshifted Position: 1839077
17-02-28 20:08:44.343 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:44.370 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:08:44.370 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:08:44.370 -08 000000081 INF: ===================Camera #0 Frame #236===================
17-02-28 20:08:44.394 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:08:44.394 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:08:44.394 -08 000000050 INF: ===================Camera #2 Frame #237===================
17-02-28 20:08:44.467 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:44.540 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:08:44.540 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:08:44.541 -08 000000081 INF: ===================Camera #0 Frame #243===================
17-02-28 20:08:44.564 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:08:44.564 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:08:44.564 -08 000000050 INF: ===================Camera #2 Frame #244===================
17-02-28 20:08:44.604 -08 000000059 INF: Y Motor: Unshifted Position: 1634759
17-02-28 20:08:44.654 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:44.714 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:08:44.714 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:08:44.714 -08 000000081 INF: ===================Camera #0 Frame #249===================
17-02-28 20:08:44.738 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:08:44.738 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:08:44.738 -08 000000050 INF: ===================Camera #2 Frame #250===================
17-02-28 20:08:44.778 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:44.884 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:08:44.884 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:08:44.884 -08 000000081 INF: ===================Camera #0 Frame #255===================
17-02-28 20:08:44.909 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:08:44.909 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:08:44.909 -08 000000050 INF: ===================Camera #2 Frame #256===================
17-02-28 20:08:44.915 -08 000000059 INF: Y Motor: Unshifted Position: 1432602
17-02-28 20:08:44.965 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:45.054 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:08:45.054 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:08:45.054 -08 000000081 INF: ===================Camera #0 Frame #262===================
17-02-28 20:08:45.079 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:08:45.079 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:08:45.079 -08 000000050 INF: ===================Camera #2 Frame #263===================
17-02-28 20:08:45.092 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:45.227 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:08:45.227 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:08:45.227 -08 000000081 INF: ===================Camera #0 Frame #268===================
17-02-28 20:08:45.229 -08 000000059 INF: Y Motor: Unshifted Position: 1230222
17-02-28 20:08:45.253 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:08:45.253 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:08:45.253 -08 000000050 INF: ===================Camera #2 Frame #269===================
17-02-28 20:08:45.279 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:45.351 -08 000000052 INF: FPGA: Recv TDIYWAIT
17-02-28 20:08:45.351 -08 000000088 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:45.353 -08 000000088 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:08:45.354 -08 000000078 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:08:45.354 -08 000000086 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:08:45.354 -08 000000078 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:08:45.354 -08 000000078 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:08:45.354 -08 000000078 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:08:45.354 -08 000000078 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:08:45.354 -08 000000086 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:08:45.354 -08 000000086 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:08:45.354 -08 000000086 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:08:45.355 -08 000000086 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:08:45.396 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:08:45.396 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:08:45.396 -08 000000081 INF: ===================Camera #0 Frame #272===================
17-02-28 20:08:45.403 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:45.409 -08 000000081 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:08:45.410 -08 000000081 INF: ===================CameraTDI Cleanup===================
17-02-28 20:08:45.540 -08 000000059 INF: Y Motor: Unshifted Position: 1026136
17-02-28 20:08:45.542 -08 000000081 INF: Camera #0 ReleaseBuffer
17-02-28 20:08:45.542 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:08:45.542 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:08:45.542 -08 000000050 INF: ===================Camera #2 Frame #272===================
17-02-28 20:08:45.543 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:08:45.552 -08 000000050 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:08:45.553 -08 000000050 INF: ===================CameraTDI Cleanup===================
17-02-28 20:08:45.572 -08 000000081 INF: ======================================
17-02-28 20:08:45.590 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:45.726 -08 000000050 INF: Camera #2 ReleaseBuffer
17-02-28 20:08:45.726 -08 000000057 INF: FPGA: Recv EX2MV
17-02-28 20:08:45.726 -08 000000057 INF: FPGA: Recv EX1MV
17-02-28 20:08:45.726 -08 000000086 INF: Excitation Filter 1: Moved 107 steps in 372.0504 ms
17-02-28 20:08:45.726 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:08:45.726 -08 000000078 INF: Excitation Filter 2: Moved 107 steps in 372.2799 ms
17-02-28 20:08:45.726 -08 000000078 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.394 ms
17-02-28 20:08:45.726 -08 000000078 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.478 ms
17-02-28 20:08:45.726 -08 000000086 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.1466 ms
17-02-28 20:08:45.726 -08 000000086 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.5582 ms
17-02-28 20:08:45.727 -08 000000078 INF: ======================================
17-02-28 20:08:45.727 -08 000000086 INF: ======================================
17-02-28 20:08:45.728 -08 000000059 INF: Y Motor: Unshifted Position: 992960
17-02-28 20:08:45.728 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:08:45.728 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:45.728 -08 000000088 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:45.729 -08 000000088 INF: ======================================
17-02-28 20:08:45.760 -08 000000050 INF: ======================================
17-02-28 20:08:45.761 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:08:45.762 -08 000000045 INF: ======================================
17-02-28 20:08:45.790 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:08:45.790 -08 000000059 INF: Y Motor: Moved to 14.9296 after 7861 ms
17-02-28 20:08:45.790 -08 000000059 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:08:45.851 -08 000000059 INF: Y Motor: Recv v 4097\r
17-02-28 20:08:45.851 -08 000000059 INF: Y Motor: Status After move finished OK:
17-02-28 20:08:45.851 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:45.916 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:08:45.916 -08 000000059 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:45.916 -08 000000059 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:08:45.976 -08 000000059 INF: Y Motor: Recv v 134217728\r
17-02-28 20:08:45.976 -08 000000059 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:08:45.976 -08 000000059 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:08:45.976 -08 000000059 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:08:46.040 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:08:46.040 -08 000000059 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:08:46.040 -08 000000059 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:08:46.040 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:46.102 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:08:46.102 -08 000000059 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:08:46.102 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:46.163 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:08:46.163 -08 000000059 INF: ======================================
17-02-28 20:08:46.164 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:46.165 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:46.166 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:46.166 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:08:46.227 -08 000000035 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:08:46.227 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:08:46.289 -08 000000066 INF: FPGA: Recv TDIYERD 1492961
17-02-28 20:08:46.289 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:08:46.350 -08 000000074 INF: FPGA: Recv ZADCR 20863
17-02-28 20:08:46.350 -08 000000042 INF: At scan end Y pos = 14.930 and Z pos = -0.080. Y moved -48.539 mm
17-02-28 20:08:46.350 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:08:46.412 -08 000000020 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:08:46.412 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:08:46.412 -08 000000042 INF: TDIScan finished after 12728.9754 ms
17-02-28 20:08:46.412 -08 000000042 INF: Image[0]: Y should trigger at 63.469 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:08:46.412 -08 000000042 INF: Image[2]: Y should trigger at 63.469 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:08:46.415 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:46.452 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.540 um
17-02-28 20:08:46.452 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:46.453 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:08:46.476 -08 000000066 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:08:46.476 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:46.477 -08 000000069 INF: ===================Dither Clean Up Command===================
17-02-28 20:08:46.477 -08 000000059 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:08:46.477 -08 000000096 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:08:46.477 -08 000000074 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:08:46.477 -08 000000096 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:08:46.477 -08 000000096 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:08:46.477 -08 000000074 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:08:46.478 -08 000000074 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:08:46.478 -08 000000059 INF: ======================================
17-02-28 20:08:46.478 -08 000000010 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:08:46.478 -08 000000054 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:08:46.478 -08 000000054 INF: ======================================
17-02-28 20:08:46.479 -08 000000010 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:08:46.538 -08 000000102 INF: FPGA: Recv ZSTEP 
17-02-28 20:08:46.538 -08 000000102 INF: FPGA: Recv ZSEL 
17-02-28 20:08:46.538 -08 000000010 INF: FPGA: Xmit ZDACW 26921\n
17-02-28 20:08:46.538 -08 000000074 INF: ======================================
17-02-28 20:08:46.540 -08 000000096 INF: Y Motor: Recv ok\r
17-02-28 20:08:46.540 -08 000000096 INF: ======================================
17-02-28 20:08:46.600 -08 000000100 INF: FPGA: Recv ZDACW 
17-02-28 20:08:46.600 -08 000000010 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:08:46.601 -08 000000010 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:08:46.661 -08 000000086 INF: FPGA: Recv TDIBB
17-02-28 20:08:46.661 -08 000000010 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:08:46.662 -08 000000010 INF: ======================================
17-02-28 20:08:46.663 -08 000000069 INF: ======================================
17-02-28 20:08:46.664 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:46.665 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:08:46.665 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:46.665 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:08:46.666 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:46.666 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:08:46.666 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:46.666 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:08:46.666 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:46.666 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827===================
17-02-28 20:08:46.667 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827===================
17-02-28 20:08:46.667 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:08:46.667 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:08:46.667 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:08:46.668 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827===================
17-02-28 20:08:46.690 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:08:46.691 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:46.691 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:46.691 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:46.691 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:08:46.691 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:08:46.692 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface===================
17-02-28 20:08:46.712 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:46.714 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:46.714 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:08:46.714 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:08:46.762 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2202 Request: {"Cycle":2,"Lane":2,"Tile":2202,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF262","HCSMMF268","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:46.879 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:08:46.880 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:46.880 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:08:46.880 -08 000000042 INF: Lane 3, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:08:46.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:46.882 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:46.884 -08 000000045 INF: ===================Move Tilt Motor 1===================
17-02-28 20:08:46.884 -08 000000067 INF: ===================Move Tilt Motor 2===================
17-02-28 20:08:46.884 -08 000000045 INF: ======================================
17-02-28 20:08:46.884 -08 000000105 INF: ===================Move Tilt Motor 3===================
17-02-28 20:08:46.884 -08 000000067 INF: ======================================
17-02-28 20:08:46.885 -08 000000105 INF: ======================================
17-02-28 20:08:46.886 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:46.887 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:46.893 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2206 Request: {"Cycle":2,"Lane":2,"Tile":2206,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF180","HCSMMF256","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:46.896 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2214 Request: {"Cycle":2,"Lane":2,"Tile":2214,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF244","HCSMMF266","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:46.896 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:08:46.897 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2212 Request: {"Cycle":2,"Lane":2,"Tile":2212,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF275","HCSMMF202","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:46.994 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2204 Request: {"Cycle":2,"Lane":2,"Tile":2204,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF182","HCSMMF287","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:46.996 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2207 Request: {"Cycle":2,"Lane":2,"Tile":2207,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF218","HCSMMF215","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:46.997 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2209 Request: {"Cycle":2,"Lane":2,"Tile":2209,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF211","HCSMMF230","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:46.999 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2205 Request: {"Cycle":2,"Lane":2,"Tile":2205,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF264","HCSMMF258","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:46.999 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2215 Request: {"Cycle":2,"Lane":2,"Tile":2215,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF203","HCSMMF284","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.000 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2201 Request: {"Cycle":2,"Lane":2,"Tile":2201,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF234","HCSMMF187","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.001 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2203 Request: {"Cycle":2,"Lane":2,"Tile":2203,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF259","HCSMMF216","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.002 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2211 Request: {"Cycle":2,"Lane":2,"Tile":2211,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF197","HCSMMF242","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.002 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2219 Request: {"Cycle":2,"Lane":2,"Tile":2219,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF205","HCSMMF204","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.002 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:08:47.002 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:08:47.002 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:08:47.003 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2213 Request: {"Cycle":2,"Lane":2,"Tile":2213,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF241","HCSMMF199","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.003 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:08:47.004 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2221 Request: {"Cycle":2,"Lane":2,"Tile":2221,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF281","HCSMMF279","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:08:47.005 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2216 Request: {"Cycle":2,"Lane":2,"Tile":2216,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF246","HCSMMF286","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.006 -08 000000020 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2227 Request: {"Cycle":2,"Lane":2,"Tile":2227,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF276","HCSMMF277","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.007 -08 000000111 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2220 Request: {"Cycle":2,"Lane":2,"Tile":2220,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF247","HCSMMF191","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.007 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:08:47.007 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2225 Request: {"Cycle":2,"Lane":2,"Tile":2225,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF257","HCSMMF273","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.007 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:08:47.008 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:08:47.008 -08 000000107 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2210 Request: {"Cycle":2,"Lane":2,"Tile":2210,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF219","HCSMMF183","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.009 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2222 Request: {"Cycle":2,"Lane":2,"Tile":2222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF193","HCSMMF239","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.010 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2218 Request: {"Cycle":2,"Lane":2,"Tile":2218,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF237","HCSMMF210","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.010 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2208 Request: {"Cycle":2,"Lane":2,"Tile":2208,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF253","HCSMMF254","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.012 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2228 Request: {"Cycle":2,"Lane":2,"Tile":2228,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF224","HCSMMF192","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.013 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2224 Request: {"Cycle":2,"Lane":2,"Tile":2224,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF227","HCSMMF220","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.014 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2217 Request: {"Cycle":2,"Lane":2,"Tile":2217,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF223","HCSMMF217","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.015 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2226 Request: {"Cycle":2,"Lane":2,"Tile":2226,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF209","HCSMMF188","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.016 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 2223 Request: {"Cycle":2,"Lane":2,"Tile":2223,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF235","HCSMMF265","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:08:47.017 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:47.024 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:08:47.053 -08 000000088 INF: FPGA: Recv ZSTEP 
17-02-28 20:08:47.053 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:08:47.054 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:08:47.054 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1027 mm
17-02-28 20:08:47.054 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:08:47.115 -08 000000078 INF: FPGA: Recv ZTRG 
17-02-28 20:08:47.115 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:08:47.139 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:47.139 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:08:47.176 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:47.177 -08 000000053 INF: FPGA: Recv ZYT 
17-02-28 20:08:47.177 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:08:47.177 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:08:47.182 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:08:47.240 -08 000000025 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:08:47.240 -08 000000025 INF: FPGA: Recv ZMV 
17-02-28 20:08:47.240 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:08:47.240 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.6879 ms
17-02-28 20:08:47.240 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:08:47.274 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:47.280 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:08:47.301 -08 000000010 INF: FPGA: Recv ZDACR 60292
17-02-28 20:08:47.301 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.5121 ms w/comms
17-02-28 20:08:47.301 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:08:47.301 -08 000000042 INF: Z Motor: MoveAbsStepped took 247.6813 ms
17-02-28 20:08:47.302 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:08:47.302 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:08:47.311 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:08:47.311 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:08:47.311 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:08:47.311 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:08:47.311 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:08:47.363 -08 000000057 INF: FPGA: Recv ZSTEP 
17-02-28 20:08:47.370 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:47.374 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:08:47.375 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:08:47.375 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:08:47.384 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:08:47.384 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:08:47.384 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:08:47.387 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:47.387 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:08:47.387 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:47.387 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = C_1
17-02-28 20:08:47.387 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:47.388 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:47.389 -08 000000097 INF: ===================MoveEmissionFilters===================
17-02-28 20:08:47.389 -08 000000047 INF: ===================Move X,Y===================
17-02-28 20:08:47.390 -08 000000096 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:08:47.390 -08 000000059 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:08:47.390 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:08:47.390 -08 000000047 INF: ===================Move X,Y, Parallel===================
17-02-28 20:08:47.390 -08 000000044 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:08:47.390 -08 000000096 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:08:47.390 -08 000000059 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:08:47.391 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:08:47.391 -08 000000044 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:08:47.391 -08 000000030 INF: ===================Move X Motor without settling===================
17-02-28 20:08:47.391 -08 000000070 INF: ===================Move Y Motor without settling===================
17-02-28 20:08:47.391 -08 000000030 INF: X Motor: Xmit PR VM\n
17-02-28 20:08:47.391 -08 000000070 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9296 mm
17-02-28 20:08:47.391 -08 000000088 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:08:47.391 -08 000000081 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:08:47.391 -08 000000070 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:08:47.391 -08 000000070 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:47.392 -08 000000084 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:08:47.392 -08 000000058 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:08:47.392 -08 000000033 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:08:47.392 -08 000000032 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:08:47.392 -08 000000083 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:08:47.392 -08 000000051 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:08:47.392 -08 000000081 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:08:47.392 -08 000000051 INF: ======================================
17-02-28 20:08:47.392 -08 000000033 INF: ======================================
17-02-28 20:08:47.393 -08 000000088 INF: ======================================
17-02-28 20:08:47.393 -08 000000058 INF: ======================================
17-02-28 20:08:47.393 -08 000000032 INF: ======================================
17-02-28 20:08:47.394 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:08:47.395 -08 000000084 INF: ======================================
17-02-28 20:08:47.395 -08 000000081 INF: ======================================
17-02-28 20:08:47.395 -08 000000069 INF: ======================================
17-02-28 20:08:47.395 -08 000000083 INF: ======================================
17-02-28 20:08:47.396 -08 000000059 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:08:47.396 -08 000000096 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:08:47.397 -08 000000044 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:08:47.397 -08 000000059 INF: ======================================
17-02-28 20:08:47.398 -08 000000096 INF: ======================================
17-02-28 20:08:47.398 -08 000000044 INF: ======================================
17-02-28 20:08:47.399 -08 000000097 INF: ======================================
17-02-28 20:08:47.431 -08 000000030 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:08:47.431 -08 000000030 INF: X Motor: Xmit PR VI\n
17-02-28 20:08:47.431 -08 000000070 INF: Y Motor: Recv ok\r
17-02-28 20:08:47.431 -08 000000070 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:08:47.431 -08 000000070 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:47.453 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:08:47.490 -08 000000070 INF: Y Motor: Recv ok\r
17-02-28 20:08:47.490 -08 000000070 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:47.491 -08 000000030 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:08:47.491 -08 000000030 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:08:47.491 -08 000000030 INF: X Motor: Moving to 74.7156 mm @15.000 mm/sec, started at 72.4790 mm
17-02-28 20:08:47.491 -08 000000030 INF: X Motor: Xmit MA 6437\n
17-02-28 20:08:47.555 -08 000000070 INF: Y Motor: Recv v 0\r
17-02-28 20:08:47.555 -08 000000030 INF: X Motor: Recv MA 6437\r\n>
17-02-28 20:08:47.555 -08 000000070 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:47.555 -08 000000030 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:08:47.555 -08 000000070 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:08:47.555 -08 000000070 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:08:47.617 -08 000000070 INF: Y Motor: Recv ok\r
17-02-28 20:08:47.617 -08 000000070 INF: Y Motor: Start the move command
17-02-28 20:08:47.617 -08 000000070 INF: Y Motor: Xmit t 1\r
17-02-28 20:08:47.679 -08 000000070 INF: Y Motor: Recv ok\r
17-02-28 20:08:47.679 -08 000000070 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:08:47.679 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:47.732 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:08:47.804 -08 000000070 INF: Y Motor: Unshifted Position: 1074488
17-02-28 20:08:47.854 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:47.979 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:48.116 -08 000000070 INF: Y Motor: Unshifted Position: 1777122
17-02-28 20:08:48.166 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:48.179 -08 000000030 INF: X Motor: Xmit PR ER\n
17-02-28 20:08:48.241 -08 000000030 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:08:48.241 -08 000000030 INF: X Motor: Moved to 74.7153 after 686 ms
17-02-28 20:08:48.241 -08 000000030 INF: ======================================
17-02-28 20:08:48.291 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:48.429 -08 000000070 INF: Y Motor: Unshifted Position: 2560484
17-02-28 20:08:48.479 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:48.603 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:48.740 -08 000000070 INF: Y Motor: Unshifted Position: 3346254
17-02-28 20:08:48.790 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:48.913 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:49.050 -08 000000070 INF: Y Motor: Unshifted Position: 4126330
17-02-28 20:08:49.100 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:49.227 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:49.363 -08 000000070 INF: Y Motor: Unshifted Position: 4902099
17-02-28 20:08:49.413 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:49.537 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:49.675 -08 000000070 INF: Y Motor: Unshifted Position: 5689752
17-02-28 20:08:49.725 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:49.849 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:49.986 -08 000000070 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:08:49.986 -08 000000070 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:08:49.986 -08 000000070 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:50.051 -08 000000070 INF: Y Motor: Recv v 0\r
17-02-28 20:08:50.051 -08 000000070 INF: Y Motor: Moved to 64.5335 after 2372 ms
17-02-28 20:08:50.051 -08 000000070 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:08:50.113 -08 000000070 INF: Y Motor: Recv v 4096\r
17-02-28 20:08:50.113 -08 000000070 INF: Y Motor: Status After move finished OK:
17-02-28 20:08:50.113 -08 000000070 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:50.175 -08 000000070 INF: Y Motor: Recv v 0\r
17-02-28 20:08:50.175 -08 000000070 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:50.175 -08 000000070 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:08:50.237 -08 000000070 INF: Y Motor: Recv v 402653184\r
17-02-28 20:08:50.237 -08 000000070 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:08:50.237 -08 000000070 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:08:50.237 -08 000000070 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:08:50.299 -08 000000070 INF: Y Motor: Recv v 0\r
17-02-28 20:08:50.299 -08 000000070 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:08:50.299 -08 000000070 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:08:50.299 -08 000000070 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:50.361 -08 000000070 INF: Y Motor: Recv ok\r
17-02-28 20:08:50.361 -08 000000070 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:08:50.361 -08 000000070 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:50.423 -08 000000070 INF: Y Motor: Recv ok\r
17-02-28 20:08:50.423 -08 000000070 INF: ======================================
17-02-28 20:08:50.424 -08 000000047 INF: ===================Move X,Y===================
17-02-28 20:08:50.426 -08 000000047 INF: ======================================
17-02-28 20:08:50.427 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:50.428 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:50.428 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:08:50.428 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:08:50.485 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:08:50.485 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:08:50.549 -08 000000051 INF: FPGA: Recv ZFREQCL
17-02-28 20:08:50.549 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:08:50.550 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:50.550 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:08:50.611 -08 000000086 INF: FPGA: Recv TDIYERD 6453351
17-02-28 20:08:50.611 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453351 counts (64.534 mm)
17-02-28 20:08:50.611 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:50.612 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:50.613 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:08:50.613 -08 000000101 INF: ===================Set YMotor gains for scans===================
17-02-28 20:08:50.613 -08 000000101 INF: ======================================
17-02-28 20:08:50.613 -08 000000044 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:08:50.614 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:08:50.615 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:08:50.616 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:08:50.616 -08 000000044 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:08:50.672 -08 000000036 INF: FPGA: Recv TDIYPOS
17-02-28 20:08:50.672 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:08:50.674 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:08:50.674 -08 000000044 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:08:50.737 -08 000000084 INF: FPGA: Recv TDIYARM2
17-02-28 20:08:50.737 -08 000000044 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:08:50.738 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:08:50.740 -08 000000044 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:08:50.740 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:08:50.742 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:08:50.742 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:08:50.743 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:08:51.108 -08 000000044 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:08:51.109 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:08:51.109 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:08:51.123 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:08:51.125 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:08:51.507 -08 000000044 INF: Camera #2 AttachBuffer (imageDataPtr = 53822025616 imgPtr = 53895782648 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:08:51.507 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:08:51.507 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:08:51.522 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:08:51.523 -08 000000044 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:08:51.525 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:08:51.526 -08 000000044 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:51.527 -08 000000044 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:08:51.527 -08 000000044 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:51.529 -08 000000044 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:08:51.529 -08 000000044 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:08:51.529 -08 000000044 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:08:51.529 -08 000000044 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:08:51.545 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:08:51.545 -08 000000044 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:08:51.545 -08 000000044 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:08:51.607 -08 000000037 INF: FPGA: Recv ZARM
17-02-28 20:08:51.607 -08 000000044 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0842 ms
17-02-28 20:08:51.607 -08 000000044 INF: Z Motor: ArmAbsStepped took 78.1732 ms
17-02-28 20:08:51.607 -08 000000044 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:51.609 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:08:51.610 -08 000000044 INF: ======================================
17-02-28 20:08:51.611 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:51.612 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:51.612 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:51.613 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:51.613 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:51.614 -08 000000051 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:08:51.614 -08 000000023 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:08:51.614 -08 000000051 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:08:51.614 -08 000000051 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:08:51.614 -08 000000051 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:08:51.614 -08 000000023 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:08:51.614 -08 000000023 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:08:51.614 -08 000000023 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:08:51.614 -08 000000051 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:08:51.617 -08 000000023 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:08:51.982 -08 000000032 INF: FPGA: Recv EX2MV
17-02-28 20:08:51.982 -08 000000032 INF: FPGA: Recv EX1MV
17-02-28 20:08:51.982 -08 000000023 INF: Excitation Filter 1: Moved -107 steps in 367.6685 ms
17-02-28 20:08:51.982 -08 000000051 INF: Excitation Filter 2: Moved -107 steps in 367.8526 ms
17-02-28 20:08:51.982 -08 000000051 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.0023 ms
17-02-28 20:08:51.982 -08 000000051 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.0787 ms
17-02-28 20:08:51.982 -08 000000023 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.7925 ms
17-02-28 20:08:51.982 -08 000000023 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.2053 ms
17-02-28 20:08:51.983 -08 000000051 INF: ======================================
17-02-28 20:08:51.983 -08 000000023 INF: ======================================
17-02-28 20:08:51.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:51.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:51.986 -08 000000064 INF: ===================Serial===================
17-02-28 20:08:51.986 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:08:51.986 -08 000000102 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:51.987 -08 000000064 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:08:51.987 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:08:51.987 -08 000000101 INF: ===================Camera TDI, Parallel===================
17-02-28 20:08:51.987 -08 000000059 INF: ===================Move Y Motor without settling===================
17-02-28 20:08:51.987 -08 000000102 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:08:51.987 -08 000000059 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:08:51.987 -08 000000059 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:08:51.987 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:51.988 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:08:51.988 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:08:51.988 -08 000000102 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:08:51.989 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:51.989 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:51.990 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:51.990 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:52.046 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:08:52.046 -08 000000059 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:08:52.046 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:52.108 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:08:52.108 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:52.139 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:52.139 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:52.140 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:52.140 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:52.170 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:08:52.170 -08 000000059 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:52.170 -08 000000059 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:08:52.170 -08 000000059 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:08:52.234 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:08:52.234 -08 000000059 INF: Y Motor: Start the move command
17-02-28 20:08:52.234 -08 000000059 INF: Y Motor: Xmit t 1\r
17-02-28 20:08:52.289 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:52.289 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:52.290 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:52.290 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:52.297 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:08:52.297 -08 000000059 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:08:52.297 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:52.421 -08 000000059 INF: Y Motor: Unshifted Position: 5935179
17-02-28 20:08:52.439 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:52.439 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:52.440 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:52.440 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:52.471 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:52.589 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:08:52.589 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:08:52.589 -08 000000087 INF: ===================Camera #0 Frame #1===================
17-02-28 20:08:52.590 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:08:52.590 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:08:52.591 -08 000000030 INF: ===================Camera #2 Frame #1===================
17-02-28 20:08:52.595 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:52.734 -08 000000059 INF: Y Motor: Unshifted Position: 5888677
17-02-28 20:08:52.742 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:08:52.742 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:08:52.742 -08 000000087 INF: ===================Camera #0 Frame #3===================
17-02-28 20:08:52.744 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:08:52.744 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:08:52.744 -08 000000030 INF: ===================Camera #2 Frame #3===================
17-02-28 20:08:52.784 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:52.898 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:08:52.898 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:08:52.898 -08 000000087 INF: ===================Camera #0 Frame #4===================
17-02-28 20:08:52.901 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:08:52.901 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:08:52.901 -08 000000030 INF: ===================Camera #2 Frame #4===================
17-02-28 20:08:52.908 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:53.044 -08 000000059 INF: Y Motor: Unshifted Position: 5841667
17-02-28 20:08:53.051 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:08:53.051 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:08:53.051 -08 000000087 INF: ===================Camera #0 Frame #5===================
17-02-28 20:08:53.055 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:08:53.055 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:08:53.055 -08 000000030 INF: ===================Camera #2 Frame #5===================
17-02-28 20:08:53.094 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:53.104 -08 000000010 INF: FPGA: Recv ZWAIT 
17-02-28 20:08:53.104 -08 000000010 INF: FPGA: Recv TDIYWAIT
17-02-28 20:08:53.104 -08 000000102 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:53.104 -08 000000064 INF: ===================Serial===================
17-02-28 20:08:53.106 -08 000000102 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:08:53.106 -08 000000064 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:08:53.106 -08 000000064 INF: ===================Serial===================
17-02-28 20:08:53.107 -08 000000054 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:08:53.107 -08 000000090 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:08:53.107 -08 000000054 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:08:53.107 -08 000000054 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:08:53.107 -08 000000054 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:08:53.107 -08 000000090 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:08:53.107 -08 000000090 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:08:53.107 -08 000000090 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:08:53.107 -08 000000054 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:08:53.107 -08 000000064 INF: ======================================
17-02-28 20:08:53.108 -08 000000090 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:08:53.204 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:08:53.204 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:08:53.204 -08 000000087 INF: ===================Camera #0 Frame #6===================
17-02-28 20:08:53.207 -08 000000087 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:08:53.208 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:08:53.208 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:08:53.208 -08 000000030 INF: ===================Camera #2 Frame #6===================
17-02-28 20:08:53.208 -08 000000087 INF: ===================CameraTDI Cleanup===================
17-02-28 20:08:53.211 -08 000000030 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:08:53.212 -08 000000030 INF: ===================CameraTDI Cleanup===================
17-02-28 20:08:53.218 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:53.231 -08 000000087 INF: Camera #0 ReleaseBuffer
17-02-28 20:08:53.231 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:08:53.232 -08 000000087 INF: ======================================
17-02-28 20:08:53.255 -08 000000030 INF: Camera #2 ReleaseBuffer
17-02-28 20:08:53.255 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:08:53.256 -08 000000030 INF: ======================================
17-02-28 20:08:53.258 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:08:53.259 -08 000000101 INF: ======================================
17-02-28 20:08:53.357 -08 000000059 INF: Y Motor: Unshifted Position: 5797057
17-02-28 20:08:53.407 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:53.481 -08 000000064 INF: FPGA: Recv EX2MV
17-02-28 20:08:53.482 -08 000000064 INF: FPGA: Recv EX1MV
17-02-28 20:08:53.482 -08 000000090 INF: Excitation Filter 1: Moved 107 steps in 374.5017 ms
17-02-28 20:08:53.482 -08 000000054 INF: Excitation Filter 2: Moved 107 steps in 374.6297 ms
17-02-28 20:08:53.482 -08 000000090 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 374.6522 ms
17-02-28 20:08:53.482 -08 000000090 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 374.7309 ms
17-02-28 20:08:53.482 -08 000000054 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 374.7651 ms
17-02-28 20:08:53.482 -08 000000054 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 374.9392 ms
17-02-28 20:08:53.482 -08 000000090 INF: ======================================
17-02-28 20:08:53.482 -08 000000054 INF: ======================================
17-02-28 20:08:53.483 -08 000000102 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:53.485 -08 000000102 INF: ======================================
17-02-28 20:08:53.543 -08 000000059 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:08:53.543 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:08:53.543 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:53.607 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:08:53.607 -08 000000059 INF: Y Motor: Moved to 62.9704 after 1310 ms
17-02-28 20:08:53.607 -08 000000059 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:08:53.670 -08 000000059 INF: Y Motor: Recv v 4097\r
17-02-28 20:08:53.670 -08 000000059 INF: Y Motor: Status After move finished OK:
17-02-28 20:08:53.670 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:53.734 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:08:53.734 -08 000000059 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:53.734 -08 000000059 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:08:53.794 -08 000000059 INF: Y Motor: Recv v 134217728\r
17-02-28 20:08:53.794 -08 000000059 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:08:53.794 -08 000000059 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:08:53.794 -08 000000059 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:08:53.858 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:08:53.858 -08 000000059 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:08:53.858 -08 000000059 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:08:53.858 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:53.918 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:08:53.918 -08 000000059 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:08:53.918 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:53.980 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:08:53.980 -08 000000059 INF: ======================================
17-02-28 20:08:53.981 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:53.982 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:08:53.983 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:53.983 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:08:54.040 -08 000000081 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:08:54.040 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:08:54.103 -08 000000073 INF: FPGA: Recv TDIYERD 6297044
17-02-28 20:08:54.103 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:08:54.165 -08 000000047 INF: FPGA: Recv ZADCR 2422
17-02-28 20:08:54.165 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:08:54.165 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:08:54.227 -08 000000085 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:08:54.227 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:08:54.227 -08 000000042 INF: TDIScan finished after 6852.472 ms
17-02-28 20:08:54.227 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:08:54.227 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:08:54.227 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:08:54.292 -08 000000102 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:08:54.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:54.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:54.294 -08 000000054 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:08:54.294 -08 000000047 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:08:54.294 -08 000000025 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:08:54.294 -08 000000054 INF: ======================================
17-02-28 20:08:54.294 -08 000000025 INF: ======================================
17-02-28 20:08:54.294 -08 000000047 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:08:54.294 -08 000000047 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:08:54.356 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:08:54.356 -08 000000047 INF: ======================================
17-02-28 20:08:54.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:54.358 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:54.359 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:08:54.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:54.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:08:54.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:54.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:08:54.462 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:54.462 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:08:54.490 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:08:54.490 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:08:54.490 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:08:54.491 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:08:54.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:08:54.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:08:54.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:08:55.185 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:08:55.208 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0817612613754468Best Z position at top surface = -0.153439884407716Best Z position at top surface + compensator offset = -0.130739884407716 C:2,L:3,B
17-02-28 20:08:55.210 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.153439884407716
17-02-28 20:08:55.210 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.9452
17-02-28 20:08:55.210 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0817612613754468
17-02-28 20:08:55.210 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.6002
17-02-28 20:08:55.210 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0817612613754468.
17-02-28 20:08:55.210 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:08:55.345 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:08:55.345 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:08:55.414 -08 000000062 INF: FPGA: Recv ZSTEP 
17-02-28 20:08:55.414 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:08:55.416 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:55.416 -08 000000042 INF: Lane 3, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:08:55.416 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:55.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:55.418 -08 000000023 INF: ===================Move Tilt Motor 2===================
17-02-28 20:08:55.418 -08 000000010 INF: ===================Move Tilt Motor 3===================
17-02-28 20:08:55.418 -08 000000036 INF: ===================Move Tilt Motor 1===================
17-02-28 20:08:55.418 -08 000000010 INF: ======================================
17-02-28 20:08:55.418 -08 000000023 INF: ======================================
17-02-28 20:08:55.418 -08 000000036 INF: ======================================
17-02-28 20:08:55.419 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:55.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:55.421 -08 000000042 INF: ETF Best Z: -0.08176126 mm (21433 DAC)
17-02-28 20:08:55.421 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:55.422 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:55.422 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:08:55.422 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:55.423 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:08:55.429 -08 000000042 INF: Swath 1 position calculated to be: {X=74.15818, Y=39.78827} from estimated center X= 74.67699, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:08:55.429 -08 000000042 INF: Swath 2 position calculated to be: {X=75.26618, Y=39.78827} from estimated center X= 74.67699, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:08:55.836 -08 000000042 INF: Swath 0: Converted transform from (-48.43954, -2.295634) pixels to (-0.01656, -0.00069) mm.
17-02-28 20:08:55.841 -08 000000042 INF: Swath 1: Converted transform from (-73.94557, -0.6406184) pixels to (-0.02553, -0.000345) mm.
17-02-28 20:08:55.842 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827===================
17-02-28 20:08:55.843 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827===================
17-02-28 20:08:55.843 -08 000000042 INF: Transformed XStagePosition from 74.15818 mm to 74.1416202373803 mm.
17-02-28 20:08:55.855 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5775878014984 mm.
17-02-28 20:08:55.855 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3775878014984 mm.
17-02-28 20:08:55.855 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4683378014984 mm.
17-02-28 20:08:55.857 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:55.857 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:08:55.857 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:55.857 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = C_1
17-02-28 20:08:55.862 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:55.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:55.864 -08 000000105 INF: ===================MoveEmissionFilters===================
17-02-28 20:08:55.864 -08 000000111 INF: ===================Move X,Y===================
17-02-28 20:08:55.864 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:08:55.864 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:08:55.864 -08 000000111 INF: ===================Move X,Y, Parallel===================
17-02-28 20:08:55.864 -08 000000085 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:08:55.865 -08 000000052 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:08:55.865 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:08:55.865 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:08:55.865 -08 000000069 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:08:55.865 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:08:55.865 -08 000000069 INF: Z Motor: Moving to -0.1018 mm, started at -0.0100 mm
17-02-28 20:08:55.865 -08 000000069 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:08:55.865 -08 000000085 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:08:55.865 -08 000000059 INF: ===================Move X Motor without settling===================
17-02-28 20:08:55.865 -08 000000052 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:08:55.865 -08 000000035 INF: ===================Move Y Motor without settling===================
17-02-28 20:08:55.866 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:08:55.866 -08 000000059 INF: X Motor: Xmit PR VM\n
17-02-28 20:08:55.866 -08 000000044 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:08:55.866 -08 000000106 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:08:55.866 -08 000000034 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:08:55.866 -08 000000092 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:08:55.866 -08 000000106 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:08:55.866 -08 000000074 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:08:55.866 -08 000000047 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:08:55.867 -08 000000062 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:08:55.867 -08 000000083 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:08:55.867 -08 000000034 INF: ======================================
17-02-28 20:08:55.867 -08 000000062 INF: ======================================
17-02-28 20:08:55.867 -08 000000074 INF: ======================================
17-02-28 20:08:55.867 -08 000000044 INF: ======================================
17-02-28 20:08:55.867 -08 000000106 INF: ======================================
17-02-28 20:08:55.868 -08 000000092 INF: ======================================
17-02-28 20:08:55.868 -08 000000083 INF: ======================================
17-02-28 20:08:55.868 -08 000000047 INF: ======================================
17-02-28 20:08:55.868 -08 000000085 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:08:55.868 -08 000000035 INF: Y Motor: Moving to 64.5776 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:08:55.869 -08 000000035 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:08:55.869 -08 000000035 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:55.869 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:08:55.869 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:08:55.869 -08 000000052 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:08:55.869 -08 000000085 INF: ======================================
17-02-28 20:08:55.870 -08 000000070 INF: ======================================
17-02-28 20:08:55.870 -08 000000030 INF: ======================================
17-02-28 20:08:55.871 -08 000000052 INF: ======================================
17-02-28 20:08:55.872 -08 000000105 INF: ======================================
17-02-28 20:08:55.884 -08 000000090 INF: FPGA: Recv ZTRG 
17-02-28 20:08:55.884 -08 000000069 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:08:55.945 -08 000000109 INF: FPGA: Recv ZYT 
17-02-28 20:08:55.945 -08 000000069 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:08:55.945 -08 000000069 INF: FPGA: Xmit ZMV 26676\n
17-02-28 20:08:55.947 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:08:55.947 -08 000000035 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:08:55.947 -08 000000035 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:55.947 -08 000000059 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:08:55.947 -08 000000059 INF: X Motor: Xmit PR VI\n
17-02-28 20:08:56.008 -08 000000057 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:08:56.008 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:08:56.009 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:08:56.009 -08 000000035 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:56.009 -08 000000059 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:08:56.009 -08 000000059 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:08:56.009 -08 000000059 INF: X Motor: Moving to 74.1416 mm @15.000 mm/sec, started at 74.7153 mm
17-02-28 20:08:56.009 -08 000000059 INF: X Motor: Xmit MA 6202\n
17-02-28 20:08:56.069 -08 000000047 INF: FPGA: Recv ZMV 
17-02-28 20:08:56.069 -08 000000069 INF: Z Motor: MoveAndTrigger 'ZMV' command took 124.1478 ms
17-02-28 20:08:56.069 -08 000000069 INF: FPGA: Xmit ZDACR\n
17-02-28 20:08:56.071 -08 000000035 INF: Y Motor: Recv v 0\r
17-02-28 20:08:56.071 -08 000000035 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:56.071 -08 000000059 INF: X Motor: Recv MA 6202\r\n>
17-02-28 20:08:56.071 -08 000000059 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:08:56.071 -08 000000035 INF: Y Motor: Set target position to 5957759 encoder counts
17-02-28 20:08:56.071 -08 000000035 INF: Y Motor: Xmit s r0xca 5957759\r
17-02-28 20:08:56.131 -08 000000084 INF: FPGA: Recv ZDACR 26676
17-02-28 20:08:56.131 -08 000000069 INF: Z Motor: MoveAndTrigger took 266.0763 ms w/comms
17-02-28 20:08:56.131 -08 000000069 INF: Z Motor: After move to -0.1018, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:08:56.131 -08 000000069 INF: Z Motor: MoveAbsStepped took 266.2117 ms
17-02-28 20:08:56.132 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:08:56.133 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:08:56.133 -08 000000035 INF: Y Motor: Start the move command
17-02-28 20:08:56.133 -08 000000035 INF: Y Motor: Xmit t 1\r
17-02-28 20:08:56.133 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:08:56.134 -08 000000050 INF: ===================TDI Scan Setup===================
17-02-28 20:08:56.134 -08 000000058 INF: ===================Camera Arm TDI===================
17-02-28 20:08:56.134 -08 000000050 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:56.135 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:08:56.135 -08 000000050 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:08:56.135 -08 000000058 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:08:56.135 -08 000000050 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:08:56.136 -08 000000050 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:08:56.195 -08 000000032 INF: FPGA: Recv ZSEL 
17-02-28 20:08:56.195 -08 000000050 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:08:56.195 -08 000000050 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:08:56.196 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:08:56.196 -08 000000035 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:08:56.196 -08 000000035 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:56.211 -08 000000077 INF: RunCopyService queue size at 2/28/2017 8:08:56 PM is 2
17-02-28 20:08:56.258 -08 000000087 INF: FPGA: Recv TDIBB
17-02-28 20:08:56.258 -08 000000050 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:08:56.259 -08 000000050 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:08:56.260 -08 000000050 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:56.261 -08 000000050 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:08:56.261 -08 000000050 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:08:56.261 -08 000000050 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:08:56.320 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:08:56.320 -08 000000050 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:56.322 -08 000000035 INF: Y Motor: Unshifted Position: 5880642
17-02-28 20:08:56.322 -08 000000050 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:08:56.322 -08 000000050 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:56.324 -08 000000050 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:08:56.324 -08 000000050 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:08:56.324 -08 000000050 INF: Z Motor: Arming to move to -0.0618 mm
17-02-28 20:08:56.324 -08 000000050 INF: FPGA: Xmit ZYT 6437759 4\n
17-02-28 20:08:56.372 -08 000000035 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:56.382 -08 000000083 INF: FPGA: Recv ZYT 
17-02-28 20:08:56.382 -08 000000050 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6380642 enc / 63.806 mm / ) = 6437759 enc / 64.378 mm
17-02-28 20:08:56.382 -08 000000050 INF: FPGA: Xmit ZARM 16190\n
17-02-28 20:08:56.444 -08 000000109 INF: FPGA: Recv ZARM
17-02-28 20:08:56.444 -08 000000050 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9652 ms
17-02-28 20:08:56.444 -08 000000050 INF: Z Motor: ArmAbsStepped took 119.9219 ms
17-02-28 20:08:56.444 -08 000000050 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:08:56.445 -08 000000050 INF: ===================TDI Scan Setup===================
17-02-28 20:08:56.447 -08 000000050 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:08:56.447 -08 000000050 INF: ===================TDI Scan Setup===================
17-02-28 20:08:56.449 -08 000000050 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:08:56.449 -08 000000050 INF: ===================TDI Scan Setup===================
17-02-28 20:08:56.450 -08 000000050 INF: ======================================
17-02-28 20:08:56.496 -08 000000035 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:56.508 -08 000000059 INF: X Motor: Xmit PR ER\n
17-02-28 20:08:56.570 -08 000000059 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:08:56.570 -08 000000059 INF: X Motor: Moved to 74.1416 after 498 ms
17-02-28 20:08:56.570 -08 000000059 INF: ======================================
17-02-28 20:08:56.632 -08 000000035 INF: Y Motor: Unshifted Position: 5957760
17-02-28 20:08:56.632 -08 000000035 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:08:56.632 -08 000000035 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:56.697 -08 000000035 INF: Y Motor: Recv v 0\r
17-02-28 20:08:56.697 -08 000000035 INF: Y Motor: Moved to 64.5776 after 501 ms
17-02-28 20:08:56.697 -08 000000035 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:08:56.759 -08 000000035 INF: Y Motor: Recv v 4096\r
17-02-28 20:08:56.759 -08 000000035 INF: Y Motor: Status After move finished OK:
17-02-28 20:08:56.759 -08 000000035 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:56.821 -08 000000035 INF: Y Motor: Recv v 0\r
17-02-28 20:08:56.821 -08 000000035 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:56.821 -08 000000035 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:08:56.883 -08 000000035 INF: Y Motor: Recv v 402653184\r
17-02-28 20:08:56.883 -08 000000035 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:08:56.883 -08 000000035 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:08:56.883 -08 000000035 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:08:56.945 -08 000000035 INF: Y Motor: Recv v 0\r
17-02-28 20:08:56.945 -08 000000035 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:08:56.945 -08 000000035 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:08:56.945 -08 000000035 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:57.007 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:08:57.007 -08 000000035 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:08:57.007 -08 000000035 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:57.069 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:08:57.069 -08 000000035 INF: ======================================
17-02-28 20:08:57.070 -08 000000111 INF: ===================Move X,Y===================
17-02-28 20:08:57.071 -08 000000111 INF: ======================================
17-02-28 20:08:57.114 -08 000000058 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:08:57.114 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:08:57.115 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:08:57.130 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:08:57.132 -08 000000058 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:08:58.148 -08 000000058 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:08:58.148 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:08:58.148 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:08:58.166 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:08:58.167 -08 000000058 INF: ===================Camera Arm TDI===================
17-02-28 20:08:58.168 -08 000000058 INF: ======================================
17-02-28 20:08:58.170 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:08:58.171 -08 000000069 INF: ======================================
17-02-28 20:08:58.172 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:08:58.173 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:58.173 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:08:58.173 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:08:58.255 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:08:58.255 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:08:58.315 -08 000000053 INF: FPGA: Recv ZFREQCL
17-02-28 20:08:58.315 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:08:58.315 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:58.315 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:08:58.377 -08 000000051 INF: FPGA: Recv TDIYERD 6457761
17-02-28 20:08:58.377 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457761 counts (64.578 mm)
17-02-28 20:08:58.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:58.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:58.379 -08 000000100 INF: ===================TDI FPGA Arm===================
17-02-28 20:08:58.379 -08 000000047 INF: ===================Set YMotor gains for scans===================
17-02-28 20:08:58.379 -08 000000047 INF: ======================================
17-02-28 20:08:58.379 -08 000000100 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:08:58.380 -08 000000100 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:08:58.380 -08 000000100 INF: FPGA: Xmit TDIYPOS 6346834\n
17-02-28 20:08:58.443 -08 000000109 INF: FPGA: Recv TDIYPOS
17-02-28 20:08:58.443 -08 000000100 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:08:58.444 -08 000000100 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:08:58.445 -08 000000100 INF: FPGA: Xmit TDIYARM3 139264 6437759 1 1\n
17-02-28 20:08:58.504 -08 000000078 INF: FPGA: Recv TDIYARM3
17-02-28 20:08:58.504 -08 000000100 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:08:58.505 -08 000000100 INF: ===================TDI FPGA Arm===================
17-02-28 20:08:58.506 -08 000000100 INF: ======================================
17-02-28 20:08:58.507 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:08:58.508 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:08:58.508 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:58.508 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:58.509 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:58.510 -08 000000047 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:08:58.510 -08 000000010 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:08:58.510 -08 000000047 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:08:58.510 -08 000000047 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:08:58.510 -08 000000047 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:08:58.510 -08 000000047 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:08:58.510 -08 000000010 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:08:58.510 -08 000000010 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:08:58.510 -08 000000010 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:08:58.511 -08 000000010 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:08:58.879 -08 000000062 INF: FPGA: Recv EX2MV
17-02-28 20:08:58.879 -08 000000062 INF: FPGA: Recv EX1MV
17-02-28 20:08:58.879 -08 000000010 INF: Excitation Filter 1: Moved -107 steps in 368.7159 ms
17-02-28 20:08:58.879 -08 000000010 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.8072 ms
17-02-28 20:08:58.879 -08 000000010 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.9801 ms
17-02-28 20:08:58.879 -08 000000047 INF: Excitation Filter 2: Moved -107 steps in 368.9376 ms
17-02-28 20:08:58.879 -08 000000047 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.1394 ms
17-02-28 20:08:58.879 -08 000000047 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.2539 ms
17-02-28 20:08:58.879 -08 000000010 INF: ======================================
17-02-28 20:08:58.879 -08 000000047 INF: ======================================
17-02-28 20:08:58.880 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:58.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:08:58.882 -08 000000044 INF: ===================Camera TDI===================
17-02-28 20:08:58.882 -08 000000084 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:08:58.882 -08 000000036 INF: ===================FPGA Z Wait===================
17-02-28 20:08:58.882 -08 000000109 INF: ===================Move Y Motor without settling===================
17-02-28 20:08:58.883 -08 000000036 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:08:58.883 -08 000000109 INF: Y Motor: Moving to 14.9293 mm @6.500 mm/sec, started at 64.5776 mm
17-02-28 20:08:58.883 -08 000000109 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:08:58.883 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:08:58.883 -08 000000044 INF: ===================Camera TDI, Parallel===================
17-02-28 20:08:58.883 -08 000000084 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:08:58.884 -08 000000070 INF: ===================Camera TDI===================
17-02-28 20:08:58.884 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:08:58.885 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:58.885 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:58.886 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:58.886 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:58.890 -08 000000084 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:08:58.945 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:08:58.945 -08 000000109 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:08:58.945 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:08:59.005 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:08:59.005 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:08:59.035 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:59.035 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:59.036 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:59.036 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:59.067 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:08:59.067 -08 000000109 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:08:59.067 -08 000000109 INF: Y Motor: Set target position to 992925 encoder counts
17-02-28 20:08:59.067 -08 000000109 INF: Y Motor: Xmit s r0xca 992925\r
17-02-28 20:08:59.129 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:08:59.129 -08 000000109 INF: Y Motor: Start the move command
17-02-28 20:08:59.129 -08 000000109 INF: Y Motor: Xmit t 1\r
17-02-28 20:08:59.185 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:59.185 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:59.186 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:08:59.186 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:08:59.193 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:08:59.193 -08 000000109 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:08:59.193 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:59.253 -08 000000050 INF: FPGA: Recv ZWAIT 
17-02-28 20:08:59.253 -08 000000036 INF: ======================================
17-02-28 20:08:59.318 -08 000000109 INF: Y Motor: Unshifted Position: 5894607
17-02-28 20:08:59.335 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:08:59.335 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:08:59.335 -08 000000070 INF: ===================Camera #0 Frame #5===================
17-02-28 20:08:59.336 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:08:59.336 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:08:59.336 -08 000000052 INF: ===================Camera #2 Frame #5===================
17-02-28 20:08:59.368 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:59.491 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:59.500 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:08:59.500 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:08:59.500 -08 000000070 INF: ===================Camera #0 Frame #11===================
17-02-28 20:08:59.502 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:08:59.502 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:08:59.502 -08 000000052 INF: ===================Camera #2 Frame #11===================
17-02-28 20:08:59.627 -08 000000109 INF: Y Motor: Unshifted Position: 5693107
17-02-28 20:08:59.668 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:08:59.668 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:08:59.668 -08 000000070 INF: ===================Camera #0 Frame #17===================
17-02-28 20:08:59.671 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:08:59.671 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:08:59.671 -08 000000052 INF: ===================Camera #2 Frame #17===================
17-02-28 20:08:59.677 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:59.804 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:08:59.836 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:08:59.836 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:08:59.836 -08 000000070 INF: ===================Camera #0 Frame #23===================
17-02-28 20:08:59.840 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:08:59.840 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:08:59.840 -08 000000052 INF: ===================Camera #2 Frame #23===================
17-02-28 20:08:59.940 -08 000000109 INF: Y Motor: Unshifted Position: 5488797
17-02-28 20:08:59.990 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:00.004 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:09:00.004 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:09:00.004 -08 000000070 INF: ===================Camera #0 Frame #29===================
17-02-28 20:09:00.009 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:09:00.009 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:09:00.009 -08 000000052 INF: ===================Camera #2 Frame #29===================
17-02-28 20:09:00.116 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:00.172 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:09:00.172 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:09:00.172 -08 000000070 INF: ===================Camera #0 Frame #35===================
17-02-28 20:09:00.178 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:09:00.178 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:09:00.178 -08 000000052 INF: ===================Camera #2 Frame #36===================
17-02-28 20:09:00.252 -08 000000109 INF: Y Motor: Unshifted Position: 5287077
17-02-28 20:09:00.302 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:00.340 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:09:00.340 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:09:00.340 -08 000000070 INF: ===================Camera #0 Frame #42===================
17-02-28 20:09:00.351 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:09:00.351 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:09:00.351 -08 000000052 INF: ===================Camera #2 Frame #42===================
17-02-28 20:09:00.428 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:00.512 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:09:00.512 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:09:00.512 -08 000000070 INF: ===================Camera #0 Frame #48===================
17-02-28 20:09:00.521 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:09:00.521 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:09:00.521 -08 000000052 INF: ===================Camera #2 Frame #48===================
17-02-28 20:09:00.564 -08 000000109 INF: Y Motor: Unshifted Position: 5083617
17-02-28 20:09:00.614 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:00.681 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:09:00.681 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:09:00.681 -08 000000070 INF: ===================Camera #0 Frame #54===================
17-02-28 20:09:00.691 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:09:00.691 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:09:00.691 -08 000000052 INF: ===================Camera #2 Frame #54===================
17-02-28 20:09:00.738 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:00.850 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:09:00.850 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:09:00.850 -08 000000070 INF: ===================Camera #0 Frame #60===================
17-02-28 20:09:00.860 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:09:00.860 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:09:00.860 -08 000000052 INF: ===================Camera #2 Frame #61===================
17-02-28 20:09:00.878 -08 000000109 INF: Y Motor: Unshifted Position: 4878653
17-02-28 20:09:00.928 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:01.019 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:09:01.019 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:09:01.019 -08 000000070 INF: ===================Camera #0 Frame #67===================
17-02-28 20:09:01.032 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:09:01.032 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:09:01.032 -08 000000052 INF: ===================Camera #2 Frame #67===================
17-02-28 20:09:01.051 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:01.187 -08 000000109 INF: Y Motor: Unshifted Position: 4678455
17-02-28 20:09:01.191 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:09:01.191 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:09:01.191 -08 000000070 INF: ===================Camera #0 Frame #73===================
17-02-28 20:09:01.202 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:09:01.202 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:09:01.202 -08 000000052 INF: ===================Camera #2 Frame #73===================
17-02-28 20:09:01.237 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:01.361 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:09:01.361 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:09:01.361 -08 000000070 INF: ===================Camera #0 Frame #79===================
17-02-28 20:09:01.364 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:01.372 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:09:01.372 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:09:01.372 -08 000000052 INF: ===================Camera #2 Frame #80===================
17-02-28 20:09:01.500 -08 000000109 INF: Y Motor: Unshifted Position: 4474780
17-02-28 20:09:01.530 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:09:01.530 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:09:01.530 -08 000000070 INF: ===================Camera #0 Frame #85===================
17-02-28 20:09:01.545 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:09:01.545 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:09:01.545 -08 000000052 INF: ===================Camera #2 Frame #86===================
17-02-28 20:09:01.550 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:01.674 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:01.699 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:09:01.699 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:09:01.699 -08 000000070 INF: ===================Camera #0 Frame #92===================
17-02-28 20:09:01.715 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:09:01.715 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:09:01.715 -08 000000052 INF: ===================Camera #2 Frame #92===================
17-02-28 20:09:01.813 -08 000000109 INF: Y Motor: Unshifted Position: 4271332
17-02-28 20:09:01.863 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:01.871 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:09:01.871 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:09:01.871 -08 000000070 INF: ===================Camera #0 Frame #98===================
17-02-28 20:09:01.885 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:09:01.885 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:09:01.885 -08 000000052 INF: ===================Camera #2 Frame #98===================
17-02-28 20:09:01.987 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:02.040 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:09:02.040 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:09:02.040 -08 000000070 INF: ===================Camera #0 Frame #104===================
17-02-28 20:09:02.055 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:09:02.055 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:09:02.055 -08 000000052 INF: ===================Camera #2 Frame #105===================
17-02-28 20:09:02.123 -08 000000109 INF: Y Motor: Unshifted Position: 4069605
17-02-28 20:09:02.173 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:02.209 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:09:02.209 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:09:02.209 -08 000000070 INF: ===================Camera #0 Frame #110===================
17-02-28 20:09:02.228 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:09:02.228 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:09:02.228 -08 000000052 INF: ===================Camera #2 Frame #111===================
17-02-28 20:09:02.300 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:02.378 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:09:02.378 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:09:02.378 -08 000000070 INF: ===================Camera #0 Frame #117===================
17-02-28 20:09:02.398 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:09:02.398 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:09:02.398 -08 000000052 INF: ===================Camera #2 Frame #117===================
17-02-28 20:09:02.435 -08 000000109 INF: Y Motor: Unshifted Position: 3864862
17-02-28 20:09:02.485 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:02.551 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:09:02.551 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:09:02.551 -08 000000070 INF: ===================Camera #0 Frame #123===================
17-02-28 20:09:02.568 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:09:02.568 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:09:02.568 -08 000000052 INF: ===================Camera #2 Frame #124===================
17-02-28 20:09:02.612 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:02.721 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:09:02.721 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:09:02.721 -08 000000070 INF: ===================Camera #0 Frame #129===================
17-02-28 20:09:02.742 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:09:02.742 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:09:02.742 -08 000000052 INF: ===================Camera #2 Frame #130===================
17-02-28 20:09:02.748 -08 000000109 INF: Y Motor: Unshifted Position: 3663142
17-02-28 20:09:02.798 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:02.891 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:09:02.891 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:09:02.891 -08 000000070 INF: ===================Camera #0 Frame #135===================
17-02-28 20:09:02.912 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:09:02.912 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:09:02.912 -08 000000052 INF: ===================Camera #2 Frame #136===================
17-02-28 20:09:02.922 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:03.059 -08 000000109 INF: Y Motor: Unshifted Position: 3459046
17-02-28 20:09:03.061 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:09:03.061 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:09:03.061 -08 000000070 INF: ===================Camera #0 Frame #142===================
17-02-28 20:09:03.083 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:09:03.083 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:09:03.083 -08 000000052 INF: ===================Camera #2 Frame #143===================
17-02-28 20:09:03.109 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:03.234 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:09:03.234 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:09:03.234 -08 000000070 INF: ===================Camera #0 Frame #148===================
17-02-28 20:09:03.236 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:03.257 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:09:03.257 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:09:03.257 -08 000000052 INF: ===================Camera #2 Frame #149===================
17-02-28 20:09:03.371 -08 000000109 INF: Y Motor: Unshifted Position: 3256026
17-02-28 20:09:03.404 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:09:03.404 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:09:03.404 -08 000000070 INF: ===================Camera #0 Frame #154===================
17-02-28 20:09:03.421 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:03.428 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:09:03.428 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:09:03.428 -08 000000052 INF: ===================Camera #2 Frame #155===================
17-02-28 20:09:03.548 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:03.574 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:09:03.574 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:09:03.574 -08 000000070 INF: ===================Camera #0 Frame #161===================
17-02-28 20:09:03.599 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:09:03.599 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:09:03.599 -08 000000052 INF: ===================Camera #2 Frame #162===================
17-02-28 20:09:03.684 -08 000000109 INF: Y Motor: Unshifted Position: 3054532
17-02-28 20:09:03.734 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:03.747 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:09:03.747 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:09:03.747 -08 000000070 INF: ===================Camera #0 Frame #167===================
17-02-28 20:09:03.773 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:09:03.773 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:09:03.773 -08 000000052 INF: ===================Camera #2 Frame #168===================
17-02-28 20:09:03.858 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:03.917 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:09:03.917 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:09:03.917 -08 000000070 INF: ===================Camera #0 Frame #173===================
17-02-28 20:09:03.943 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:09:03.943 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:09:03.943 -08 000000052 INF: ===================Camera #2 Frame #174===================
17-02-28 20:09:03.997 -08 000000109 INF: Y Motor: Unshifted Position: 2850222
17-02-28 20:09:04.047 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:04.087 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:09:04.087 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:09:04.087 -08 000000070 INF: ===================Camera #0 Frame #180===================
17-02-28 20:09:04.113 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:09:04.113 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:09:04.113 -08 000000052 INF: ===================Camera #2 Frame #180===================
17-02-28 20:09:04.172 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:04.260 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:09:04.260 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:09:04.260 -08 000000070 INF: ===================Camera #0 Frame #186===================
17-02-28 20:09:04.284 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:09:04.284 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:09:04.284 -08 000000052 INF: ===================Camera #2 Frame #187===================
17-02-28 20:09:04.307 -08 000000109 INF: Y Motor: Unshifted Position: 2649371
17-02-28 20:09:04.357 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:04.431 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:09:04.431 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:09:04.431 -08 000000070 INF: ===================Camera #0 Frame #192===================
17-02-28 20:09:04.457 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:09:04.457 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:09:04.457 -08 000000052 INF: ===================Camera #2 Frame #193===================
17-02-28 20:09:04.484 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:04.601 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:09:04.601 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:09:04.601 -08 000000070 INF: ===================Camera #0 Frame #198===================
17-02-28 20:09:04.620 -08 000000109 INF: Y Motor: Unshifted Position: 2445708
17-02-28 20:09:04.626 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:09:04.626 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:09:04.626 -08 000000052 INF: ===================Camera #2 Frame #199===================
17-02-28 20:09:04.670 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:04.771 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:09:04.771 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:09:04.771 -08 000000070 INF: ===================Camera #0 Frame #205===================
17-02-28 20:09:04.794 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:04.797 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:09:04.797 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:09:04.797 -08 000000052 INF: ===================Camera #2 Frame #206===================
17-02-28 20:09:04.933 -08 000000109 INF: Y Motor: Unshifted Position: 2241611
17-02-28 20:09:04.944 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:09:04.944 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:09:04.944 -08 000000070 INF: ===================Camera #0 Frame #211===================
17-02-28 20:09:04.971 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:09:04.971 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:09:04.971 -08 000000052 INF: ===================Camera #2 Frame #212===================
17-02-28 20:09:04.983 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:05.108 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:05.114 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:09:05.114 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:09:05.114 -08 000000070 INF: ===================Camera #0 Frame #217===================
17-02-28 20:09:05.142 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:09:05.142 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:09:05.142 -08 000000052 INF: ===================Camera #2 Frame #218===================
17-02-28 20:09:05.245 -08 000000109 INF: Y Motor: Unshifted Position: 2039892
17-02-28 20:09:05.284 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:09:05.284 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:09:05.284 -08 000000070 INF: ===================Camera #0 Frame #224===================
17-02-28 20:09:05.295 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:05.313 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:09:05.313 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:09:05.313 -08 000000052 INF: ===================Camera #2 Frame #225===================
17-02-28 20:09:05.422 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:05.457 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:09:05.457 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:09:05.457 -08 000000070 INF: ===================Camera #0 Frame #230===================
17-02-28 20:09:05.487 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:09:05.487 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:09:05.487 -08 000000052 INF: ===================Camera #2 Frame #231===================
17-02-28 20:09:05.556 -08 000000109 INF: Y Motor: Unshifted Position: 1835789
17-02-28 20:09:05.606 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:05.627 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:09:05.627 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:09:05.627 -08 000000070 INF: ===================Camera #0 Frame #236===================
17-02-28 20:09:05.657 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:09:05.657 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:09:05.657 -08 000000052 INF: ===================Camera #2 Frame #237===================
17-02-28 20:09:05.730 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:05.797 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:09:05.797 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:09:05.797 -08 000000070 INF: ===================Camera #0 Frame #242===================
17-02-28 20:09:05.828 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:09:05.828 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:09:05.828 -08 000000052 INF: ===================Camera #2 Frame #244===================
17-02-28 20:09:05.867 -08 000000109 INF: Y Motor: Unshifted Position: 1632769
17-02-28 20:09:05.917 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:05.967 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:09:05.967 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:09:05.967 -08 000000070 INF: ===================Camera #0 Frame #249===================
17-02-28 20:09:06.002 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:09:06.002 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:09:06.002 -08 000000052 INF: ===================Camera #2 Frame #250===================
17-02-28 20:09:06.044 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:06.140 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:09:06.140 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:09:06.140 -08 000000070 INF: ===================Camera #0 Frame #255===================
17-02-28 20:09:06.173 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:09:06.173 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:09:06.173 -08 000000052 INF: ===================Camera #2 Frame #256===================
17-02-28 20:09:06.180 -08 000000109 INF: Y Motor: Unshifted Position: 1431271
17-02-28 20:09:06.231 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:06.311 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:09:06.311 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:09:06.311 -08 000000070 INF: ===================Camera #0 Frame #261===================
17-02-28 20:09:06.344 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:09:06.344 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:09:06.344 -08 000000052 INF: ===================Camera #2 Frame #263===================
17-02-28 20:09:06.355 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:06.481 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:09:06.481 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:09:06.481 -08 000000070 INF: ===================Camera #0 Frame #268===================
17-02-28 20:09:06.492 -08 000000109 INF: Y Motor: Unshifted Position: 1226939
17-02-28 20:09:06.518 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:09:06.518 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:09:06.518 -08 000000052 INF: ===================Camera #2 Frame #269===================
17-02-28 20:09:06.542 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:06.617 -08 000000100 INF: FPGA: Recv TDIYWAIT
17-02-28 20:09:06.617 -08 000000084 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:06.619 -08 000000084 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:09:06.620 -08 000000077 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:09:06.620 -08 000000085 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:09:06.620 -08 000000077 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:09:06.620 -08 000000077 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:09:06.620 -08 000000077 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:09:06.620 -08 000000085 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:09:06.620 -08 000000085 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:09:06.620 -08 000000085 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:09:06.620 -08 000000077 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:09:06.621 -08 000000085 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:09:06.654 -08 000000070 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:09:06.654 -08 000000070 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:09:06.654 -08 000000070 INF: ===================Camera #0 Frame #272===================
17-02-28 20:09:06.667 -08 000000070 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:09:06.668 -08 000000070 INF: ===================CameraTDI Cleanup===================
17-02-28 20:09:06.669 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:06.805 -08 000000109 INF: Y Motor: Unshifted Position: 1024794
17-02-28 20:09:06.832 -08 000000070 INF: Camera #0 ReleaseBuffer
17-02-28 20:09:06.832 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:09:06.832 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:09:06.832 -08 000000052 INF: ===================Camera #2 Frame #272===================
17-02-28 20:09:06.832 -08 000000070 INF: ===================Camera TDI===================
17-02-28 20:09:06.841 -08 000000052 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:09:06.842 -08 000000052 INF: ===================CameraTDI Cleanup===================
17-02-28 20:09:06.855 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:06.864 -08 000000070 INF: ======================================
17-02-28 20:09:06.989 -08 000000058 INF: FPGA: Recv EX1MV
17-02-28 20:09:06.989 -08 000000058 INF: FPGA: Recv EX2MV
17-02-28 20:09:06.989 -08 000000085 INF: Excitation Filter 2: Moved 107 steps in 368.8114 ms
17-02-28 20:09:06.989 -08 000000077 INF: Excitation Filter 1: Moved 107 steps in 369.0458 ms
17-02-28 20:09:06.989 -08 000000085 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 368.9687 ms
17-02-28 20:09:06.989 -08 000000077 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.1759 ms
17-02-28 20:09:06.989 -08 000000077 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.3165 ms
17-02-28 20:09:06.989 -08 000000085 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.1174 ms
17-02-28 20:09:06.989 -08 000000077 INF: ======================================
17-02-28 20:09:06.990 -08 000000085 INF: ======================================
17-02-28 20:09:06.991 -08 000000109 INF: Y Motor: Unshifted Position: 992924
17-02-28 20:09:06.991 -08 000000084 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:06.991 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:09:06.991 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:06.992 -08 000000084 INF: ======================================
17-02-28 20:09:07.041 -08 000000052 INF: Camera #2 ReleaseBuffer
17-02-28 20:09:07.041 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:09:07.057 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:09:07.057 -08 000000109 INF: Y Motor: Moved to 14.9292 after 7864 ms
17-02-28 20:09:07.057 -08 000000109 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:09:07.076 -08 000000052 INF: ======================================
17-02-28 20:09:07.077 -08 000000044 INF: ===================Camera TDI===================
17-02-28 20:09:07.079 -08 000000044 INF: ======================================
17-02-28 20:09:07.118 -08 000000109 INF: Y Motor: Recv v 4097\r
17-02-28 20:09:07.118 -08 000000109 INF: Y Motor: Status After move finished OK:
17-02-28 20:09:07.118 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:07.178 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:09:07.178 -08 000000109 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:07.178 -08 000000109 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:09:07.243 -08 000000109 INF: Y Motor: Recv v 134217728\r
17-02-28 20:09:07.243 -08 000000109 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:09:07.243 -08 000000109 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:09:07.243 -08 000000109 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:09:07.303 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:09:07.303 -08 000000109 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:09:07.303 -08 000000109 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:09:07.303 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:07.369 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:09:07.369 -08 000000109 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:09:07.369 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:07.428 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:09:07.428 -08 000000109 INF: ======================================
17-02-28 20:09:07.429 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:07.430 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:07.431 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:07.431 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:09:07.488 -08 000000085 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:09:07.488 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:09:07.553 -08 000000073 INF: FPGA: Recv TDIYERD 1492925
17-02-28 20:09:07.553 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:09:07.615 -08 000000087 INF: FPGA: Recv ZADCR 20998
17-02-28 20:09:07.615 -08 000000042 INF: At scan end Y pos = 14.929 and Z pos = -0.081. Y moved -48.539 mm
17-02-28 20:09:07.615 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:09:07.677 -08 000000105 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:09:07.677 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:09:07.677 -08 000000042 INF: TDIScan finished after 11832.3547 ms
17-02-28 20:09:07.677 -08 000000042 INF: Image[0]: Y should trigger at 63.468 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:09:07.677 -08 000000042 INF: Image[2]: Y should trigger at 63.468 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:09:07.679 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:07.709 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.452 um
17-02-28 20:09:07.710 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:07.710 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:09:07.739 -08 000000110 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:09:07.739 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:07.740 -08 000000101 INF: ===================Dither Clean Up Command===================
17-02-28 20:09:07.740 -08 000000037 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:09:07.740 -08 000000072 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:09:07.740 -08 000000090 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:09:07.740 -08 000000072 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:09:07.740 -08 000000037 INF: ======================================
17-02-28 20:09:07.740 -08 000000072 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:09:07.741 -08 000000090 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:09:07.741 -08 000000090 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:09:07.741 -08 000000044 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:09:07.741 -08 000000052 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:09:07.741 -08 000000052 INF: ======================================
17-02-28 20:09:07.742 -08 000000044 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:09:07.801 -08 000000033 INF: FPGA: Recv ZSTEP 
17-02-28 20:09:07.801 -08 000000033 INF: FPGA: Recv ZSEL 
17-02-28 20:09:07.801 -08 000000044 INF: FPGA: Xmit ZDACW 26676\n
17-02-28 20:09:07.801 -08 000000090 INF: ======================================
17-02-28 20:09:07.803 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:09:07.803 -08 000000072 INF: ======================================
17-02-28 20:09:07.863 -08 000000064 INF: FPGA: Recv ZDACW 
17-02-28 20:09:07.863 -08 000000044 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:09:07.863 -08 000000044 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:09:07.925 -08 000000085 INF: FPGA: Recv TDIBB
17-02-28 20:09:07.925 -08 000000044 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:09:07.926 -08 000000044 INF: ======================================
17-02-28 20:09:07.927 -08 000000101 INF: ======================================
17-02-28 20:09:07.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:07.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:09:07.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:07.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:09:07.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:07.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:09:07.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:07.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:09:07.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:07.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827===================
17-02-28 20:09:07.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827===================
17-02-28 20:09:07.931 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:09:07.931 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:09:07.931 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:09:07.931 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827===================
17-02-28 20:09:07.954 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:09:07.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:09:07.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827===================
17-02-28 20:09:07.955 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:07.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827===================
17-02-28 20:09:07.955 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:09:07.955 -08 000000042 INF: Transformed XStagePosition from 75.26618 mm to 75.2406519465148 mm.
17-02-28 20:09:07.967 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.577932801506 mm.
17-02-28 20:09:07.967 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.377932801506 mm.
17-02-28 20:09:07.967 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.468682801506 mm.
17-02-28 20:09:07.969 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:07.970 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:09:07.970 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:07.970 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -101.8 um, section = C_1
17-02-28 20:09:07.971 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:07.972 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:07.973 -08 000000068 INF: ===================MoveEmissionFilters===================
17-02-28 20:09:07.974 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:09:07.975 -08 000000035 INF: ===================Move X,Y, Parallel===================
17-02-28 20:09:07.976 -08 000000077 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:09:07.977 -08 000000058 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:09:07.977 -08 000000077 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:09:07.978 -08 000000077 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:09:07.978 -08 000000077 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:09:07.979 -08 000000058 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:09:07.980 -08 000000077 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:09:07.981 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:09:07.982 -08 000000085 INF: ===================Move X Motor without settling===================
17-02-28 20:09:07.982 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:09:07.983 -08 000000085 INF: X Motor: Xmit PR VM\n
17-02-28 20:09:07.983 -08 000000010 INF: ===================Move Y Motor without settling===================
17-02-28 20:09:07.983 -08 000000010 INF: Y Motor: Moving to 64.5779 mm @25.000 mm/sec, started at 14.9292 mm
17-02-28 20:09:07.984 -08 000000010 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:09:07.984 -08 000000010 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:07.986 -08 000000036 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:09:07.987 -08 000000036 INF: ======================================
17-02-28 20:09:07.988 -08 000000106 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:09:07.989 -08 000000106 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:09:07.989 -08 000000106 INF: ======================================
17-02-28 20:09:07.989 -08 000000083 INF: ===================TDI Scan Setup===================
17-02-28 20:09:07.990 -08 000000058 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:09:07.991 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:09:07.991 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:09:07.992 -08 000000083 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:07.992 -08 000000058 INF: ======================================
17-02-28 20:09:07.994 -08 000000083 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:09:07.995 -08 000000039 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:09:07.995 -08 000000039 INF: ======================================
17-02-28 20:09:07.995 -08 000000083 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:09:07.995 -08 000000052 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:09:07.996 -08 000000083 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:09:07.996 -08 000000052 INF: ======================================
17-02-28 20:09:07.998 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:09:07.998 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2101 Request: {"Cycle":2,"Lane":3,"Tile":2101,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF233","HCSMMF235","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.001 -08 000000036 INF: ======================================
17-02-28 20:09:08.005 -08 000000053 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:09:08.006 -08 000000053 INF: ======================================
17-02-28 20:09:08.021 -08 000000081 INF: ===================Camera Arm TDI===================
17-02-28 20:09:08.021 -08 000000032 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:09:08.021 -08 000000066 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:09:08.022 -08 000000032 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:09:08.022 -08 000000081 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:09:08.022 -08 000000066 INF: ======================================
17-02-28 20:09:08.023 -08 000000081 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:09:08.023 -08 000000033 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:09:08.024 -08 000000066 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:09:08.024 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:09:08.024 -08 000000033 INF: ======================================
17-02-28 20:09:08.025 -08 000000066 INF: ======================================
17-02-28 20:09:08.026 -08 000000032 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:09:08.027 -08 000000030 INF: ======================================
17-02-28 20:09:08.027 -08 000000032 INF: ======================================
17-02-28 20:09:08.030 -08 000000068 INF: ======================================
17-02-28 20:09:08.051 -08 000000086 INF: FPGA: Recv ZSEL 
17-02-28 20:09:08.053 -08 000000083 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:09:08.053 -08 000000085 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:09:08.053 -08 000000083 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:09:08.053 -08 000000085 INF: X Motor: Xmit PR VI\n
17-02-28 20:09:08.057 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:09:08.057 -08 000000010 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:09:08.057 -08 000000010 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:08.119 -08 000000058 INF: FPGA: Recv TDIBB
17-02-28 20:09:08.120 -08 000000083 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:09:08.121 -08 000000083 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:09:08.122 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:09:08.122 -08 000000010 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:08.122 -08 000000083 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:08.122 -08 000000085 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:09:08.122 -08 000000085 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:09:08.122 -08 000000085 INF: X Motor: Moving to 75.2407 mm @15.000 mm/sec, started at 74.1416 mm
17-02-28 20:09:08.123 -08 000000085 INF: X Motor: Xmit MA 6652\n
17-02-28 20:09:08.123 -08 000000083 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:09:08.124 -08 000000083 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:09:08.124 -08 000000083 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:09:08.156 -08 000000111 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2102 Request: {"Cycle":2,"Lane":3,"Tile":2102,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF220","HCSMMF260","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.157 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2106 Request: {"Cycle":2,"Lane":3,"Tile":2106,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF216","HCSMMF197","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.158 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2103 Request: {"Cycle":2,"Lane":3,"Tile":2103,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF188","HCSMMF236","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.159 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2105 Request: {"Cycle":2,"Lane":3,"Tile":2105,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF272","HCSMMF201","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.160 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2110 Request: {"Cycle":2,"Lane":3,"Tile":2110,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF225","HCSMMF199","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.163 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2109 Request: {"Cycle":2,"Lane":3,"Tile":2109,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF241","HCSMMF238","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.163 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2117 Request: {"Cycle":2,"Lane":3,"Tile":2117,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF177","HCSMMF282","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.164 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2116 Request: {"Cycle":2,"Lane":3,"Tile":2116,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF270","HCSMMF180","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.165 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2104 Request: {"Cycle":2,"Lane":3,"Tile":2104,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF227","HCSMMF221","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.165 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2111 Request: {"Cycle":2,"Lane":3,"Tile":2111,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF230","HCSMMF198","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.166 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2114 Request: {"Cycle":2,"Lane":3,"Tile":2114,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF248","HCSMMF276","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.166 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2113 Request: {"Cycle":2,"Lane":3,"Tile":2113,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF187","HCSMMF239","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.167 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2112 Request: {"Cycle":2,"Lane":3,"Tile":2112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF193","HCSMMF256","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.168 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2115 Request: {"Cycle":2,"Lane":3,"Tile":2115,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF231","HCSMMF184","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.169 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2119 Request: {"Cycle":2,"Lane":3,"Tile":2119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF215","HCSMMF218","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.169 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2108 Request: {"Cycle":2,"Lane":3,"Tile":2108,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF252","HCSMMF267","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.170 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2107 Request: {"Cycle":2,"Lane":3,"Tile":2107,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF264","HCSMMF213","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.171 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2118 Request: {"Cycle":2,"Lane":3,"Tile":2118,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF176","HCSMMF285","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.172 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2122 Request: {"Cycle":2,"Lane":3,"Tile":2122,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF251","HCSMMF203","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.172 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2123 Request: {"Cycle":2,"Lane":3,"Tile":2123,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF210","HCSMMF224","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.173 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2128 Request: {"Cycle":2,"Lane":3,"Tile":2128,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF243","HCSMMF202","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.174 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2127 Request: {"Cycle":2,"Lane":3,"Tile":2127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF281","HCSMMF244","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.175 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2125 Request: {"Cycle":2,"Lane":3,"Tile":2125,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF257","HCSMMF195","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.175 -08 000000044 INF: FPGA: Recv ZSTEP 
17-02-28 20:09:08.175 -08 000000083 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:08.175 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2124 Request: {"Cycle":2,"Lane":3,"Tile":2124,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF196","HCSMMF185","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.176 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2126 Request: {"Cycle":2,"Lane":3,"Tile":2126,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF274","HCSMMF207","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.177 -08 000000010 INF: Y Motor: Recv v 0\r
17-02-28 20:09:08.177 -08 000000010 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:08.177 -08 000000085 INF: X Motor: Recv MA 6652\r\n>
17-02-28 20:09:08.177 -08 000000010 INF: Y Motor: Set target position to 5957793 encoder counts
17-02-28 20:09:08.177 -08 000000010 INF: Y Motor: Xmit s r0xca 5957793\r
17-02-28 20:09:08.177 -08 000000083 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:09:08.177 -08 000000083 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:08.177 -08 000000085 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:09:08.178 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2121 Request: {"Cycle":2,"Lane":3,"Tile":2121,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF245","HCSMMF214","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.179 -08 000000083 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:09:08.179 -08 000000083 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:09:08.179 -08 000000083 INF: Z Motor: Arming to move to -0.0618 mm
17-02-28 20:09:08.179 -08 000000083 INF: FPGA: Xmit ZYT 6437793 4\n
17-02-28 20:09:08.180 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2120 Request: {"Cycle":2,"Lane":3,"Tile":2120,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF226","HCSMMF219","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:08.181 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:08.188 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:09:08.237 -08 000000047 INF: FPGA: Recv ZYT 
17-02-28 20:09:08.237 -08 000000083 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492924 enc / 14.929 mm / ) = 6437793 enc / 64.378 mm
17-02-28 20:09:08.237 -08 000000083 INF: FPGA: Xmit ZARM 16190\n
17-02-28 20:09:08.239 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:09:08.239 -08 000000010 INF: Y Motor: Start the move command
17-02-28 20:09:08.239 -08 000000010 INF: Y Motor: Xmit t 1\r
17-02-28 20:09:08.275 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:08.276 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:09:08.300 -08 000000057 INF: FPGA: Recv ZARM
17-02-28 20:09:08.300 -08 000000083 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 63.0205 ms
17-02-28 20:09:08.300 -08 000000083 INF: Z Motor: ArmAbsStepped took 120.9004 ms
17-02-28 20:09:08.300 -08 000000083 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:08.302 -08 000000083 INF: ===================TDI Scan Setup===================
17-02-28 20:09:08.303 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:09:08.303 -08 000000010 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:09:08.303 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:08.303 -08 000000083 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:09:08.303 -08 000000083 INF: ===================TDI Scan Setup===================
17-02-28 20:09:08.305 -08 000000083 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:09:08.305 -08 000000083 INF: ===================TDI Scan Setup===================
17-02-28 20:09:08.306 -08 000000083 INF: ======================================
17-02-28 20:09:08.311 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:08.317 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:09:08.405 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:08.411 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:09:08.426 -08 000000010 INF: Y Motor: Unshifted Position: 1075704
17-02-28 20:09:08.476 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:08.505 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:08.511 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:09:08.603 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:08.610 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:08.617 -08 000000081 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:09:08.617 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:09:08.617 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:09:08.633 -08 000000081 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:09:08.635 -08 000000081 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:09:08.739 -08 000000010 INF: Y Motor: Unshifted Position: 1785417
17-02-28 20:09:08.789 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:08.803 -08 000000085 INF: X Motor: Xmit PR ER\n
17-02-28 20:09:08.863 -08 000000085 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:09:08.863 -08 000000085 INF: X Motor: Moved to 75.2402 after 686 ms
17-02-28 20:09:08.863 -08 000000085 INF: ======================================
17-02-28 20:09:08.898 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:09:08.913 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:09.050 -08 000000010 INF: Y Motor: Unshifted Position: 2569613
17-02-28 20:09:09.100 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:09.227 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:09.233 -08 000000081 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:09:09.233 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:09:09.233 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:09:09.248 -08 000000081 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:09:09.250 -08 000000081 INF: ===================Camera Arm TDI===================
17-02-28 20:09:09.251 -08 000000081 INF: ======================================
17-02-28 20:09:09.252 -08 000000077 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:09:09.253 -08 000000077 INF: ======================================
17-02-28 20:09:09.362 -08 000000010 INF: Y Motor: Unshifted Position: 3343713
17-02-28 20:09:09.412 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:09.539 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:09.675 -08 000000010 INF: Y Motor: Unshifted Position: 4126297
17-02-28 20:09:09.725 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:09.851 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:09.986 -08 000000010 INF: Y Motor: Unshifted Position: 4904565
17-02-28 20:09:10.036 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:10.163 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:10.298 -08 000000010 INF: Y Motor: Unshifted Position: 5683141
17-02-28 20:09:10.348 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:10.475 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:10.612 -08 000000010 INF: Y Motor: Unshifted Position: 5957795
17-02-28 20:09:10.612 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:09:10.612 -08 000000010 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:10.674 -08 000000010 INF: Y Motor: Recv v 0\r
17-02-28 20:09:10.674 -08 000000010 INF: Y Motor: Moved to 64.5780 after 2371 ms
17-02-28 20:09:10.674 -08 000000010 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:09:10.737 -08 000000010 INF: Y Motor: Recv v 4096\r
17-02-28 20:09:10.737 -08 000000010 INF: Y Motor: Status After move finished OK:
17-02-28 20:09:10.737 -08 000000010 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:10.798 -08 000000010 INF: Y Motor: Recv v 0\r
17-02-28 20:09:10.798 -08 000000010 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:10.798 -08 000000010 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:09:10.862 -08 000000010 INF: Y Motor: Recv v 402653184\r
17-02-28 20:09:10.862 -08 000000010 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:09:10.862 -08 000000010 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:09:10.862 -08 000000010 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:09:10.922 -08 000000010 INF: Y Motor: Recv v 0\r
17-02-28 20:09:10.922 -08 000000010 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:09:10.922 -08 000000010 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:09:10.922 -08 000000010 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:10.989 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:09:10.989 -08 000000010 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:09:10.989 -08 000000010 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:11.049 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:09:11.049 -08 000000010 INF: ======================================
17-02-28 20:09:11.050 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:09:11.051 -08 000000035 INF: ======================================
17-02-28 20:09:11.052 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:11.053 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:11.053 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:09:11.053 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:09:11.111 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:09:11.111 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:09:11.171 -08 000000102 INF: FPGA: Recv ZFREQCL
17-02-28 20:09:11.172 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:09:11.172 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:11.172 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:09:11.233 -08 000000035 INF: FPGA: Recv TDIYERD 6457794
17-02-28 20:09:11.233 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457794 counts (64.578 mm)
17-02-28 20:09:11.233 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:11.234 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:11.235 -08 000000030 INF: ===================TDI FPGA Arm===================
17-02-28 20:09:11.235 -08 000000050 INF: ===================Set YMotor gains for scans===================
17-02-28 20:09:11.235 -08 000000050 INF: ======================================
17-02-28 20:09:11.235 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:09:11.236 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:09:11.236 -08 000000030 INF: FPGA: Xmit TDIYPOS 6346868\n
17-02-28 20:09:11.295 -08 000000092 INF: FPGA: Recv TDIYPOS
17-02-28 20:09:11.295 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:09:11.297 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:09:11.297 -08 000000030 INF: FPGA: Xmit TDIYARM3 139264 6437793 1 1\n
17-02-28 20:09:11.357 -08 000000108 INF: FPGA: Recv TDIYARM3
17-02-28 20:09:11.358 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:09:11.359 -08 000000030 INF: ===================TDI FPGA Arm===================
17-02-28 20:09:11.360 -08 000000030 INF: ======================================
17-02-28 20:09:11.361 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:11.361 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:11.362 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:11.362 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:11.363 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:11.363 -08 000000102 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:09:11.363 -08 000000068 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:09:11.363 -08 000000102 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:09:11.364 -08 000000102 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:09:11.364 -08 000000102 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:09:11.364 -08 000000068 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:09:11.364 -08 000000102 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:09:11.364 -08 000000068 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:09:11.364 -08 000000068 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:09:11.365 -08 000000068 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:09:11.732 -08 000000025 INF: FPGA: Recv EX2MV
17-02-28 20:09:11.732 -08 000000025 INF: FPGA: Recv EX1MV
17-02-28 20:09:11.732 -08 000000068 INF: Excitation Filter 1: Moved -107 steps in 368.2947 ms
17-02-28 20:09:11.732 -08 000000102 INF: Excitation Filter 2: Moved -107 steps in 368.4752 ms
17-02-28 20:09:11.732 -08 000000102 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.6828 ms
17-02-28 20:09:11.732 -08 000000102 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.7543 ms
17-02-28 20:09:11.732 -08 000000068 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.5198 ms
17-02-28 20:09:11.732 -08 000000068 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.9102 ms
17-02-28 20:09:11.733 -08 000000102 INF: ======================================
17-02-28 20:09:11.733 -08 000000068 INF: ======================================
17-02-28 20:09:11.734 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:11.735 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:11.736 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:09:11.736 -08 000000033 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:11.736 -08 000000059 INF: ===================FPGA Z Wait===================
17-02-28 20:09:11.736 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:09:11.736 -08 000000059 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:09:11.736 -08 000000058 INF: Y Motor: Moving to 14.9296 mm @6.500 mm/sec, started at 64.5780 mm
17-02-28 20:09:11.736 -08 000000036 INF: ===================Camera TDI, Parallel===================
17-02-28 20:09:11.736 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:09:11.736 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:11.737 -08 000000033 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:09:11.737 -08 000000033 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:09:11.737 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:09:11.737 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:09:11.739 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:11.739 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:11.741 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:11.741 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:11.814 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:09:11.814 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:09:11.814 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:11.876 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:09:11.876 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:11.890 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:11.890 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:11.891 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:11.891 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:11.938 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:09:11.938 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:11.938 -08 000000058 INF: Y Motor: Set target position to 992960 encoder counts
17-02-28 20:09:11.938 -08 000000058 INF: Y Motor: Xmit s r0xca 992960\r
17-02-28 20:09:12.000 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:09:12.000 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:09:12.000 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:09:12.040 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:12.040 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:12.041 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:12.041 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:12.062 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:09:12.062 -08 000000058 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:09:12.062 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:12.122 -08 000000086 INF: FPGA: Recv ZWAIT 
17-02-28 20:09:12.122 -08 000000059 INF: ======================================
17-02-28 20:09:12.186 -08 000000058 INF: Y Motor: Unshifted Position: 5895944
17-02-28 20:09:12.190 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:09:12.190 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:09:12.190 -08 000000047 INF: ===================Camera #0 Frame #4===================
17-02-28 20:09:12.191 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:09:12.191 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:09:12.191 -08 000000087 INF: ===================Camera #2 Frame #4===================
17-02-28 20:09:12.236 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:12.352 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:09:12.352 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:09:12.352 -08 000000047 INF: ===================Camera #0 Frame #10===================
17-02-28 20:09:12.354 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:09:12.354 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:09:12.354 -08 000000087 INF: ===================Camera #2 Frame #10===================
17-02-28 20:09:12.363 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:12.500 -08 000000058 INF: Y Motor: Unshifted Position: 5693572
17-02-28 20:09:12.520 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 15, frameCount = 16.
17-02-28 20:09:12.520 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 16
17-02-28 20:09:12.520 -08 000000047 INF: ===================Camera #0 Frame #16===================
17-02-28 20:09:12.523 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 15, frameCount = 16.
17-02-28 20:09:12.523 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 16
17-02-28 20:09:12.523 -08 000000087 INF: ===================Camera #2 Frame #16===================
17-02-28 20:09:12.550 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:12.674 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:12.689 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 21, frameCount = 22.
17-02-28 20:09:12.689 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 22
17-02-28 20:09:12.689 -08 000000047 INF: ===================Camera #0 Frame #22===================
17-02-28 20:09:12.692 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 21, frameCount = 22.
17-02-28 20:09:12.692 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 22
17-02-28 20:09:12.692 -08 000000087 INF: ===================Camera #2 Frame #22===================
17-02-28 20:09:12.810 -08 000000058 INF: Y Motor: Unshifted Position: 5489910
17-02-28 20:09:12.857 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:09:12.857 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:09:12.857 -08 000000047 INF: ===================Camera #0 Frame #29===================
17-02-28 20:09:12.860 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:12.861 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:09:12.861 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:09:12.861 -08 000000087 INF: ===================Camera #2 Frame #29===================
17-02-28 20:09:12.987 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:13.028 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:09:13.028 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:09:13.028 -08 000000047 INF: ===================Camera #0 Frame #35===================
17-02-28 20:09:13.033 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:09:13.033 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:09:13.033 -08 000000087 INF: ===================Camera #2 Frame #35===================
17-02-28 20:09:13.123 -08 000000058 INF: Y Motor: Unshifted Position: 5286462
17-02-28 20:09:13.173 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:13.196 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41.
17-02-28 20:09:13.196 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41
17-02-28 20:09:13.196 -08 000000047 INF: ===================Camera #0 Frame #41===================
17-02-28 20:09:13.202 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41.
17-02-28 20:09:13.202 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41
17-02-28 20:09:13.202 -08 000000087 INF: ===================Camera #2 Frame #41===================
17-02-28 20:09:13.297 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:13.364 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 46, frameCount = 47.
17-02-28 20:09:13.364 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 47
17-02-28 20:09:13.364 -08 000000047 INF: ===================Camera #0 Frame #47===================
17-02-28 20:09:13.370 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 46, frameCount = 47.
17-02-28 20:09:13.370 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 47
17-02-28 20:09:13.370 -08 000000087 INF: ===================Camera #2 Frame #47===================
17-02-28 20:09:13.434 -08 000000058 INF: Y Motor: Unshifted Position: 5084088
17-02-28 20:09:13.484 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:13.534 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 52, frameCount = 53.
17-02-28 20:09:13.534 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 53
17-02-28 20:09:13.534 -08 000000047 INF: ===================Camera #0 Frame #53===================
17-02-28 20:09:13.540 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:09:13.540 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:09:13.540 -08 000000087 INF: ===================Camera #2 Frame #54===================
17-02-28 20:09:13.611 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:13.704 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:09:13.704 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:09:13.704 -08 000000047 INF: ===================Camera #0 Frame #60===================
17-02-28 20:09:13.714 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:09:13.714 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:09:13.714 -08 000000087 INF: ===================Camera #2 Frame #60===================
17-02-28 20:09:13.747 -08 000000058 INF: Y Motor: Unshifted Position: 4880642
17-02-28 20:09:13.797 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:13.877 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-02-28 20:09:13.877 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-02-28 20:09:13.877 -08 000000047 INF: ===================Camera #0 Frame #66===================
17-02-28 20:09:13.884 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-02-28 20:09:13.884 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-02-28 20:09:13.884 -08 000000087 INF: ===================Camera #2 Frame #66===================
17-02-28 20:09:13.921 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:14.047 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 71, frameCount = 72.
17-02-28 20:09:14.047 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 72
17-02-28 20:09:14.047 -08 000000047 INF: ===================Camera #0 Frame #72===================
17-02-28 20:09:14.054 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:09:14.054 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:09:14.054 -08 000000087 INF: ===================Camera #2 Frame #73===================
17-02-28 20:09:14.061 -08 000000058 INF: Y Motor: Unshifted Position: 4679141
17-02-28 20:09:14.111 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:14.216 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:09:14.216 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:09:14.216 -08 000000047 INF: ===================Camera #0 Frame #79===================
17-02-28 20:09:14.227 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:09:14.227 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:09:14.227 -08 000000087 INF: ===================Camera #2 Frame #79===================
17-02-28 20:09:14.234 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:14.370 -08 000000058 INF: Y Motor: Unshifted Position: 4475460
17-02-28 20:09:14.389 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:09:14.389 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:09:14.389 -08 000000047 INF: ===================Camera #0 Frame #85===================
17-02-28 20:09:14.397 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:09:14.397 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:09:14.397 -08 000000087 INF: ===================Camera #2 Frame #85===================
17-02-28 20:09:14.420 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:14.544 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:14.559 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-02-28 20:09:14.559 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-02-28 20:09:14.559 -08 000000047 INF: ===================Camera #0 Frame #91===================
17-02-28 20:09:14.567 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-02-28 20:09:14.567 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-02-28 20:09:14.567 -08 000000087 INF: ===================Camera #2 Frame #91===================
17-02-28 20:09:14.683 -08 000000058 INF: Y Motor: Unshifted Position: 4272015
17-02-28 20:09:14.729 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 96, frameCount = 97.
17-02-28 20:09:14.729 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 97
17-02-28 20:09:14.729 -08 000000047 INF: ===================Camera #0 Frame #97===================
17-02-28 20:09:14.733 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:14.737 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:09:14.737 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:09:14.737 -08 000000087 INF: ===================Camera #2 Frame #98===================
17-02-28 20:09:14.857 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:14.899 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:09:14.899 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:09:14.899 -08 000000047 INF: ===================Camera #0 Frame #104===================
17-02-28 20:09:14.911 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:09:14.911 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:09:14.911 -08 000000087 INF: ===================Camera #2 Frame #104===================
17-02-28 20:09:14.996 -08 000000058 INF: Y Motor: Unshifted Position: 4070297
17-02-28 20:09:15.046 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:15.070 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:09:15.070 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:09:15.070 -08 000000047 INF: ===================Camera #0 Frame #110===================
17-02-28 20:09:15.080 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:09:15.080 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:09:15.080 -08 000000087 INF: ===================Camera #2 Frame #110===================
17-02-28 20:09:15.170 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:15.238 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 115, frameCount = 116.
17-02-28 20:09:15.238 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 116
17-02-28 20:09:15.238 -08 000000047 INF: ===================Camera #0 Frame #116===================
17-02-28 20:09:15.248 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:09:15.248 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:09:15.248 -08 000000087 INF: ===================Camera #2 Frame #117===================
17-02-28 20:09:15.307 -08 000000058 INF: Y Motor: Unshifted Position: 3866846
17-02-28 20:09:15.357 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:15.408 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 121, frameCount = 122.
17-02-28 20:09:15.408 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 122
17-02-28 20:09:15.408 -08 000000047 INF: ===================Camera #0 Frame #122===================
17-02-28 20:09:15.422 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:09:15.422 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:09:15.422 -08 000000087 INF: ===================Camera #2 Frame #123===================
17-02-28 20:09:15.481 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:15.578 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:09:15.578 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:09:15.578 -08 000000047 INF: ===================Camera #0 Frame #129===================
17-02-28 20:09:15.592 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:09:15.592 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:09:15.592 -08 000000087 INF: ===================Camera #2 Frame #129===================
17-02-28 20:09:15.620 -08 000000058 INF: Y Motor: Unshifted Position: 3663172
17-02-28 20:09:15.670 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:15.751 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:09:15.751 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:09:15.751 -08 000000047 INF: ===================Camera #0 Frame #135===================
17-02-28 20:09:15.762 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:09:15.762 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:09:15.762 -08 000000087 INF: ===================Camera #2 Frame #135===================
17-02-28 20:09:15.794 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:15.921 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 140, frameCount = 141.
17-02-28 20:09:15.921 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 141
17-02-28 20:09:15.921 -08 000000047 INF: ===================Camera #0 Frame #141===================
17-02-28 20:09:15.930 -08 000000058 INF: Y Motor: Unshifted Position: 3460814
17-02-28 20:09:15.932 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:09:15.932 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:09:15.932 -08 000000087 INF: ===================Camera #2 Frame #142===================
17-02-28 20:09:15.980 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:16.091 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:09:16.091 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:09:16.091 -08 000000047 INF: ===================Camera #0 Frame #148===================
17-02-28 20:09:16.104 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:16.106 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:09:16.106 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:09:16.106 -08 000000087 INF: ===================Camera #2 Frame #148===================
17-02-28 20:09:16.244 -08 000000058 INF: Y Motor: Unshifted Position: 3257364
17-02-28 20:09:16.265 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:09:16.265 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:09:16.265 -08 000000047 INF: ===================Camera #0 Frame #154===================
17-02-28 20:09:16.277 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:09:16.277 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:09:16.277 -08 000000087 INF: ===================Camera #2 Frame #154===================
17-02-28 20:09:16.294 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:16.419 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:16.435 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:09:16.435 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:09:16.435 -08 000000047 INF: ===================Camera #0 Frame #160===================
17-02-28 20:09:16.447 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:09:16.447 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:09:16.448 -08 000000087 INF: ===================Camera #2 Frame #161===================
17-02-28 20:09:16.557 -08 000000058 INF: Y Motor: Unshifted Position: 3055649
17-02-28 20:09:16.605 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 165, frameCount = 166.
17-02-28 20:09:16.605 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 166
17-02-28 20:09:16.605 -08 000000047 INF: ===================Camera #0 Frame #166===================
17-02-28 20:09:16.607 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:16.622 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:09:16.622 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:09:16.622 -08 000000087 INF: ===================Camera #2 Frame #167===================
17-02-28 20:09:16.731 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:16.775 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:09:16.775 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:09:16.775 -08 000000047 INF: ===================Camera #0 Frame #173===================
17-02-28 20:09:16.793 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:09:16.793 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:09:16.793 -08 000000087 INF: ===================Camera #2 Frame #173===================
17-02-28 20:09:16.867 -08 000000058 INF: Y Motor: Unshifted Position: 2851556
17-02-28 20:09:16.917 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:16.948 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:09:16.948 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:09:16.948 -08 000000047 INF: ===================Camera #0 Frame #179===================
17-02-28 20:09:16.963 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:09:16.963 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:09:16.963 -08 000000087 INF: ===================Camera #2 Frame #180===================
17-02-28 20:09:17.041 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:17.118 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 184, frameCount = 185.
17-02-28 20:09:17.118 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 185
17-02-28 20:09:17.118 -08 000000047 INF: ===================Camera #0 Frame #185===================
17-02-28 20:09:17.137 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:09:17.137 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:09:17.137 -08 000000087 INF: ===================Camera #2 Frame #186===================
17-02-28 20:09:17.179 -08 000000058 INF: Y Motor: Unshifted Position: 2649405
17-02-28 20:09:17.229 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:17.288 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:09:17.288 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:09:17.288 -08 000000047 INF: ===================Camera #0 Frame #192===================
17-02-28 20:09:17.308 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:09:17.308 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:09:17.308 -08 000000087 INF: ===================Camera #2 Frame #192===================
17-02-28 20:09:17.353 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:17.461 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:09:17.461 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:09:17.461 -08 000000047 INF: ===================Camera #0 Frame #198===================
17-02-28 20:09:17.479 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:09:17.479 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:09:17.479 -08 000000087 INF: ===================Camera #2 Frame #199===================
17-02-28 20:09:17.491 -08 000000058 INF: Y Motor: Unshifted Position: 2446393
17-02-28 20:09:17.541 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:17.631 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-02-28 20:09:17.631 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-02-28 20:09:17.631 -08 000000047 INF: ===================Camera #0 Frame #204===================
17-02-28 20:09:17.653 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:09:17.653 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:09:17.653 -08 000000087 INF: ===================Camera #2 Frame #205===================
17-02-28 20:09:17.666 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:17.801 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:09:17.801 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:09:17.801 -08 000000047 INF: ===================Camera #0 Frame #211===================
17-02-28 20:09:17.804 -08 000000058 INF: Y Motor: Unshifted Position: 2242725
17-02-28 20:09:17.824 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:09:17.824 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:09:17.824 -08 000000087 INF: ===================Camera #2 Frame #211===================
17-02-28 20:09:17.854 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:17.974 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:09:17.974 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:09:17.974 -08 000000047 INF: ===================Camera #0 Frame #217===================
17-02-28 20:09:17.978 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:17.995 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:09:17.995 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:09:17.995 -08 000000087 INF: ===================Camera #2 Frame #218===================
17-02-28 20:09:18.114 -08 000000058 INF: Y Motor: Unshifted Position: 2041229
17-02-28 20:09:18.144 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:09:18.144 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:09:18.144 -08 000000047 INF: ===================Camera #0 Frame #223===================
17-02-28 20:09:18.164 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:18.169 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:09:18.169 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:09:18.169 -08 000000087 INF: ===================Camera #2 Frame #224===================
17-02-28 20:09:18.291 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:18.314 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 228, frameCount = 229.
17-02-28 20:09:18.314 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 229
17-02-28 20:09:18.314 -08 000000047 INF: ===================Camera #0 Frame #229===================
17-02-28 20:09:18.339 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:09:18.339 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:09:18.339 -08 000000087 INF: ===================Camera #2 Frame #230===================
17-02-28 20:09:18.427 -08 000000058 INF: Y Motor: Unshifted Position: 1837559
17-02-28 20:09:18.477 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:18.483 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:09:18.483 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:09:18.483 -08 000000047 INF: ===================Camera #0 Frame #236===================
17-02-28 20:09:18.510 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:09:18.510 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:09:18.510 -08 000000087 INF: ===================Camera #2 Frame #237===================
17-02-28 20:09:18.605 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:18.656 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:09:18.656 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:09:18.656 -08 000000047 INF: ===================Camera #0 Frame #242===================
17-02-28 20:09:18.684 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:09:18.684 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:09:18.684 -08 000000087 INF: ===================Camera #2 Frame #243===================
17-02-28 20:09:18.739 -08 000000058 INF: Y Motor: Unshifted Position: 1632805
17-02-28 20:09:18.789 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:18.826 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:09:18.826 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:09:18.826 -08 000000047 INF: ===================Camera #0 Frame #248===================
17-02-28 20:09:18.855 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:09:18.855 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:09:18.855 -08 000000087 INF: ===================Camera #2 Frame #249===================
17-02-28 20:09:18.913 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:18.996 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:09:18.996 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:09:18.996 -08 000000047 INF: ===================Camera #0 Frame #255===================
17-02-28 20:09:19.026 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:09:19.026 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:09:19.026 -08 000000087 INF: ===================Camera #2 Frame #256===================
17-02-28 20:09:19.052 -08 000000058 INF: Y Motor: Unshifted Position: 1431302
17-02-28 20:09:19.102 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:19.169 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:09:19.169 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:09:19.169 -08 000000047 INF: ===================Camera #0 Frame #261===================
17-02-28 20:09:19.200 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:09:19.200 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:09:19.200 -08 000000087 INF: ===================Camera #2 Frame #262===================
17-02-28 20:09:19.226 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:19.339 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:09:19.339 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:09:19.339 -08 000000047 INF: ===================Camera #0 Frame #267===================
17-02-28 20:09:19.362 -08 000000058 INF: Y Motor: Unshifted Position: 1229571
17-02-28 20:09:19.370 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:09:19.370 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:09:19.370 -08 000000087 INF: ===================Camera #2 Frame #268===================
17-02-28 20:09:19.412 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:19.485 -08 000000108 INF: FPGA: Recv TDIYWAIT
17-02-28 20:09:19.485 -08 000000033 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:19.487 -08 000000033 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:09:19.488 -08 000000050 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:09:19.488 -08 000000111 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:09:19.488 -08 000000050 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:09:19.488 -08 000000050 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:09:19.488 -08 000000050 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:09:19.488 -08 000000050 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:09:19.488 -08 000000111 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:09:19.488 -08 000000111 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:09:19.488 -08 000000111 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:09:19.489 -08 000000111 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:09:19.508 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:09:19.508 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:09:19.508 -08 000000047 INF: ===================Camera #0 Frame #272===================
17-02-28 20:09:19.524 -08 000000047 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:09:19.525 -08 000000047 INF: ===================CameraTDI Cleanup===================
17-02-28 20:09:19.538 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:19.656 -08 000000047 INF: Camera #0 ReleaseBuffer
17-02-28 20:09:19.656 -08 000000087 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:09:19.656 -08 000000087 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:09:19.656 -08 000000087 INF: ===================Camera #2 Frame #272===================
17-02-28 20:09:19.656 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:09:19.670 -08 000000087 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:09:19.671 -08 000000087 INF: ===================CameraTDI Cleanup===================
17-02-28 20:09:19.676 -08 000000058 INF: Y Motor: Unshifted Position: 1025483
17-02-28 20:09:19.686 -08 000000047 INF: ======================================
17-02-28 20:09:19.726 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:19.836 -08 000000087 INF: Camera #2 ReleaseBuffer
17-02-28 20:09:19.836 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:09:19.860 -08 000000069 INF: FPGA: Recv EX2MV
17-02-28 20:09:19.860 -08 000000069 INF: FPGA: Recv EX1MV
17-02-28 20:09:19.860 -08 000000111 INF: Excitation Filter 1: Moved 107 steps in 371.9191 ms
17-02-28 20:09:19.860 -08 000000111 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.0237 ms
17-02-28 20:09:19.860 -08 000000111 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.0974 ms
17-02-28 20:09:19.860 -08 000000050 INF: Excitation Filter 2: Moved 107 steps in 372.1515 ms
17-02-28 20:09:19.860 -08 000000050 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.3453 ms
17-02-28 20:09:19.860 -08 000000050 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.4218 ms
17-02-28 20:09:19.860 -08 000000111 INF: ======================================
17-02-28 20:09:19.860 -08 000000050 INF: ======================================
17-02-28 20:09:19.861 -08 000000033 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:19.862 -08 000000058 INF: Y Motor: Unshifted Position: 992960
17-02-28 20:09:19.862 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:09:19.862 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:19.863 -08 000000033 INF: ======================================
17-02-28 20:09:19.869 -08 000000087 INF: ======================================
17-02-28 20:09:19.870 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:09:19.871 -08 000000036 INF: ======================================
17-02-28 20:09:19.924 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:09:19.924 -08 000000058 INF: Y Motor: Moved to 14.9296 after 7861 ms
17-02-28 20:09:19.924 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:09:19.986 -08 000000058 INF: Y Motor: Recv v 4097\r
17-02-28 20:09:19.986 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:09:19.986 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:20.051 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:09:20.051 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:20.051 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:09:20.113 -08 000000058 INF: Y Motor: Recv v 134217728\r
17-02-28 20:09:20.113 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:09:20.113 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:09:20.113 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:09:20.175 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:09:20.175 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:09:20.175 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:09:20.175 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:20.237 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:09:20.237 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:09:20.237 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:20.299 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:09:20.299 -08 000000058 INF: ======================================
17-02-28 20:09:20.300 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:20.301 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:20.302 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:20.302 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:09:20.359 -08 000000106 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:09:20.359 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:09:20.421 -08 000000023 INF: FPGA: Recv TDIYERD 1492961
17-02-28 20:09:20.421 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:09:20.486 -08 000000033 INF: FPGA: Recv ZADCR 21048
17-02-28 20:09:20.486 -08 000000042 INF: At scan end Y pos = 14.930 and Z pos = -0.081. Y moved -48.539 mm
17-02-28 20:09:20.486 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:09:20.548 -08 000000077 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:09:20.548 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:09:20.548 -08 000000042 INF: TDIScan finished after 12592.1779 ms
17-02-28 20:09:20.548 -08 000000042 INF: Image[0]: Y should trigger at 63.469 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:09:20.548 -08 000000042 INF: Image[2]: Y should trigger at 63.469 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:09:20.550 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:20.584 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.479 um
17-02-28 20:09:20.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:20.585 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:09:20.610 -08 000000074 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:09:20.610 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:20.611 -08 000000092 INF: ===================Dither Clean Up Command===================
17-02-28 20:09:20.611 -08 000000110 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:09:20.611 -08 000000035 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:09:20.611 -08 000000034 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:09:20.611 -08 000000035 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:09:20.611 -08 000000035 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:09:20.611 -08 000000034 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:09:20.612 -08 000000034 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:09:20.612 -08 000000110 INF: ======================================
17-02-28 20:09:20.612 -08 000000054 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:09:20.612 -08 000000032 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:09:20.612 -08 000000032 INF: ======================================
17-02-28 20:09:20.613 -08 000000054 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:09:20.672 -08 000000052 INF: FPGA: Recv ZSTEP 
17-02-28 20:09:20.672 -08 000000052 INF: FPGA: Recv ZSEL 
17-02-28 20:09:20.672 -08 000000054 INF: FPGA: Xmit ZDACW 26676\n
17-02-28 20:09:20.672 -08 000000034 INF: ======================================
17-02-28 20:09:20.674 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:09:20.674 -08 000000035 INF: ======================================
17-02-28 20:09:20.734 -08 000000070 INF: FPGA: Recv ZDACW 
17-02-28 20:09:20.734 -08 000000054 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:09:20.734 -08 000000054 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:09:20.796 -08 000000077 INF: FPGA: Recv TDIBB
17-02-28 20:09:20.796 -08 000000054 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:09:20.797 -08 000000054 INF: ======================================
17-02-28 20:09:20.798 -08 000000092 INF: ======================================
17-02-28 20:09:20.799 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:20.800 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:09:20.800 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:20.800 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:09:20.800 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:20.801 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:09:20.801 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:20.801 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:09:20.801 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:20.801 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827===================
17-02-28 20:09:20.801 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827===================
17-02-28 20:09:20.802 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:09:20.802 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:09:20.802 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:09:20.802 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827===================
17-02-28 20:09:20.825 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:09:20.825 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:09:20.825 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:20.826 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:09:20.826 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:09:20.827 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:09:20.827 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface===================
17-02-28 20:09:20.843 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:20.844 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:20.845 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:09:20.845 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:09:20.896 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2201 Request: {"Cycle":2,"Lane":3,"Tile":2201,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF275","HCSMMF274","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:20.910 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:09:20.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:20.911 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:09:20.911 -08 000000042 INF: Lane 4, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:09:20.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:20.912 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:20.913 -08 000000089 INF: ===================Move Tilt Motor 1===================
17-02-28 20:09:20.913 -08 000000089 INF: ======================================
17-02-28 20:09:20.915 -08 000000089 INF: ===================Move Tilt Motor 2===================
17-02-28 20:09:20.915 -08 000000089 INF: ======================================
17-02-28 20:09:20.916 -08 000000089 INF: ===================Move Tilt Motor 3===================
17-02-28 20:09:20.917 -08 000000089 INF: ======================================
17-02-28 20:09:20.918 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:20.918 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:20.926 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:09:20.937 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:09:20.937 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:09:20.937 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:09:20.937 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:09:20.938 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:09:20.942 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:09:20.943 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:09:20.943 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:09:20.973 -08 000000066 INF: FPGA: Recv ZSTEP 
17-02-28 20:09:21.031 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2204 Request: {"Cycle":2,"Lane":3,"Tile":2204,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF194","HCSMMF235","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.040 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:09:21.040 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:09:21.041 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1018 mm
17-02-28 20:09:21.041 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:09:21.137 -08 000000095 INF: FPGA: Recv ZTRG 
17-02-28 20:09:21.138 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:09:21.138 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2202 Request: {"Cycle":2,"Lane":3,"Tile":2202,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF179","HCSMMF284","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.139 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2206 Request: {"Cycle":2,"Lane":3,"Tile":2206,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF224","HCSMMF198","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.139 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2207 Request: {"Cycle":2,"Lane":3,"Tile":2207,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF255","HCSMMF269","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.140 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2221 Request: {"Cycle":2,"Lane":3,"Tile":2221,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF263","HCSMMF203","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.141 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2205 Request: {"Cycle":2,"Lane":3,"Tile":2205,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF205","HCSMMF261","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.141 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2220 Request: {"Cycle":2,"Lane":3,"Tile":2220,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF253","HCSMMF193","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.142 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2208 Request: {"Cycle":2,"Lane":3,"Tile":2208,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF265","HCSMMF247","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.143 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2215 Request: {"Cycle":2,"Lane":3,"Tile":2215,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF189","HCSMMF279","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.144 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2213 Request: {"Cycle":2,"Lane":3,"Tile":2213,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF176","HCSMMF191","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.145 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2217 Request: {"Cycle":2,"Lane":3,"Tile":2217,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF259","HCSMMF281","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.145 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2218 Request: {"Cycle":2,"Lane":3,"Tile":2218,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF285","HCSMMF182","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.146 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2203 Request: {"Cycle":2,"Lane":3,"Tile":2203,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF214","HCSMMF196","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.147 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2222 Request: {"Cycle":2,"Lane":3,"Tile":2222,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF276","HCSMMF254","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.147 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2211 Request: {"Cycle":2,"Lane":3,"Tile":2211,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF278","HCSMMF232","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.148 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2209 Request: {"Cycle":2,"Lane":3,"Tile":2209,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF249","HCSMMF272","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.149 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2216 Request: {"Cycle":2,"Lane":3,"Tile":2216,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF213","HCSMMF256","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.149 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2219 Request: {"Cycle":2,"Lane":3,"Tile":2219,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF262","HCSMMF286","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.150 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2210 Request: {"Cycle":2,"Lane":3,"Tile":2210,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF280","HCSMMF215","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.151 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2214 Request: {"Cycle":2,"Lane":3,"Tile":2214,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF268","HCSMMF283","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.152 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2212 Request: {"Cycle":2,"Lane":3,"Tile":2212,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF218","HCSMMF228","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.153 -08 000000110 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2223 Request: {"Cycle":2,"Lane":3,"Tile":2223,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF238","HCSMMF271","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.153 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2227 Request: {"Cycle":2,"Lane":3,"Tile":2227,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF200","HCSMMF243","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.154 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2226 Request: {"Cycle":2,"Lane":3,"Tile":2226,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF260","HCSMMF199","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.155 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2224 Request: {"Cycle":2,"Lane":3,"Tile":2224,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF241","HCSMMF187","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.157 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2228 Request: {"Cycle":2,"Lane":3,"Tile":2228,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF192","HCSMMF236","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.157 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 2225 Request: {"Cycle":2,"Lane":3,"Tile":2225,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF220","HCSMMF188","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:21.160 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:21.166 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:09:21.187 -08 000000073 INF: FPGA: Recv ZYT 
17-02-28 20:09:21.187 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:09:21.187 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:09:21.251 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:21.251 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:09:21.251 -08 000000111 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:09:21.252 -08 000000111 INF: FPGA: Recv ZMV 
17-02-28 20:09:21.252 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:09:21.252 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 64.7568 ms
17-02-28 20:09:21.252 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:09:21.299 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:21.304 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:09:21.310 -08 000000106 INF: FPGA: Recv ZDACR 60292
17-02-28 20:09:21.310 -08 000000042 INF: Z Motor: MoveAndTrigger took 269.7165 ms w/comms
17-02-28 20:09:21.310 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:09:21.310 -08 000000042 INF: Z Motor: MoveAbsStepped took 269.8975 ms
17-02-28 20:09:21.311 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:09:21.312 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:09:21.320 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:09:21.320 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:09:21.320 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:09:21.320 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:09:21.320 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:09:21.375 -08 000000068 INF: FPGA: Recv ZSTEP 
17-02-28 20:09:21.385 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:09:21.386 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:09:21.394 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:09:21.394 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:09:21.394 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:09:21.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:21.397 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:09:21.397 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:21.397 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = D_1
17-02-28 20:09:21.397 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:21.398 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:21.399 -08 000000109 INF: ===================MoveEmissionFilters===================
17-02-28 20:09:21.399 -08 000000052 INF: ===================Move X,Y===================
17-02-28 20:09:21.399 -08 000000052 INF: ===================Move X,Y, Parallel===================
17-02-28 20:09:21.399 -08 000000104 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:09:21.399 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:09:21.400 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:09:21.400 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:09:21.400 -08 000000111 INF: ===================Move X Motor without settling===================
17-02-28 20:09:21.400 -08 000000110 INF: ===================Move Y Motor without settling===================
17-02-28 20:09:21.400 -08 000000104 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:09:21.400 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:09:21.400 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:09:21.400 -08 000000110 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9296 mm
17-02-28 20:09:21.401 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:09:21.401 -08 000000110 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:09:21.401 -08 000000110 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:21.401 -08 000000111 INF: X Motor: Xmit PR VM\n
17-02-28 20:09:21.401 -08 000000077 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:09:21.401 -08 000000062 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:09:21.401 -08 000000100 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:09:21.401 -08 000000076 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:09:21.402 -08 000000083 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:09:21.402 -08 000000091 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:09:21.402 -08 000000062 INF: ======================================
17-02-28 20:09:21.402 -08 000000091 INF: ======================================
17-02-28 20:09:21.402 -08 000000035 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:09:21.402 -08 000000051 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:09:21.402 -08 000000083 INF: ======================================
17-02-28 20:09:21.403 -08 000000035 INF: ======================================
17-02-28 20:09:21.403 -08 000000051 INF: ======================================
17-02-28 20:09:21.404 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:09:21.404 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:09:21.404 -08 000000100 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:09:21.405 -08 000000076 INF: ======================================
17-02-28 20:09:21.405 -08 000000077 INF: ======================================
17-02-28 20:09:21.405 -08 000000100 INF: ======================================
17-02-28 20:09:21.405 -08 000000032 INF: ======================================
17-02-28 20:09:21.405 -08 000000089 INF: ======================================
17-02-28 20:09:21.406 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:09:21.406 -08 000000104 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:09:21.407 -08 000000010 INF: ======================================
17-02-28 20:09:21.407 -08 000000104 INF: ======================================
17-02-28 20:09:21.409 -08 000000109 INF: ======================================
17-02-28 20:09:21.440 -08 000000111 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:09:21.440 -08 000000111 INF: X Motor: Xmit PR VI\n
17-02-28 20:09:21.441 -08 000000110 INF: Y Motor: Recv ok\r
17-02-28 20:09:21.441 -08 000000110 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:09:21.441 -08 000000110 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:21.475 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:21.480 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:09:21.502 -08 000000110 INF: Y Motor: Recv ok\r
17-02-28 20:09:21.502 -08 000000110 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:21.502 -08 000000111 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:09:21.502 -08 000000111 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:09:21.502 -08 000000111 INF: X Motor: Moving to 77.4806 mm @15.000 mm/sec, started at 75.2402 mm
17-02-28 20:09:21.502 -08 000000111 INF: X Motor: Xmit MA 7570\n
17-02-28 20:09:21.564 -08 000000110 INF: Y Motor: Recv v 0\r
17-02-28 20:09:21.564 -08 000000110 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:21.564 -08 000000111 INF: X Motor: Recv MA 7570\r\n>
17-02-28 20:09:21.564 -08 000000110 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:09:21.564 -08 000000110 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:09:21.564 -08 000000111 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:09:21.625 -08 000000110 INF: Y Motor: Recv ok\r
17-02-28 20:09:21.625 -08 000000110 INF: Y Motor: Start the move command
17-02-28 20:09:21.625 -08 000000110 INF: Y Motor: Xmit t 1\r
17-02-28 20:09:21.645 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:21.650 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:09:21.687 -08 000000110 INF: Y Motor: Recv ok\r
17-02-28 20:09:21.687 -08 000000110 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:09:21.687 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:21.736 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:21.813 -08 000000110 INF: Y Motor: Unshifted Position: 1074485
17-02-28 20:09:21.863 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:21.987 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:22.018 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:09:22.126 -08 000000110 INF: Y Motor: Unshifted Position: 1785448
17-02-28 20:09:22.176 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:22.186 -08 000000111 INF: X Motor: Xmit PR ER\n
17-02-28 20:09:22.252 -08 000000111 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:09:22.252 -08 000000111 INF: X Motor: Moved to 77.4814 after 687 ms
17-02-28 20:09:22.252 -08 000000111 INF: ======================================
17-02-28 20:09:22.300 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:22.435 -08 000000110 INF: Y Motor: Unshifted Position: 2580484
17-02-28 20:09:22.485 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:22.611 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:22.749 -08 000000110 INF: Y Motor: Unshifted Position: 3346254
17-02-28 20:09:22.799 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:22.922 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:23.060 -08 000000110 INF: Y Motor: Unshifted Position: 4123825
17-02-28 20:09:23.110 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:23.236 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:23.371 -08 000000110 INF: Y Motor: Unshifted Position: 4901264
17-02-28 20:09:23.421 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:23.547 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:23.684 -08 000000110 INF: Y Motor: Unshifted Position: 5682856
17-02-28 20:09:23.734 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:23.860 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:23.995 -08 000000110 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:09:23.995 -08 000000110 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:09:23.995 -08 000000110 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:24.060 -08 000000110 INF: Y Motor: Recv v 0\r
17-02-28 20:09:24.060 -08 000000110 INF: Y Motor: Moved to 64.5335 after 2373 ms
17-02-28 20:09:24.060 -08 000000110 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:09:24.121 -08 000000110 INF: Y Motor: Recv v 4096\r
17-02-28 20:09:24.121 -08 000000110 INF: Y Motor: Status After move finished OK:
17-02-28 20:09:24.121 -08 000000110 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:24.183 -08 000000110 INF: Y Motor: Recv v 0\r
17-02-28 20:09:24.183 -08 000000110 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:24.183 -08 000000110 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:09:24.247 -08 000000110 INF: Y Motor: Recv v 402653184\r
17-02-28 20:09:24.247 -08 000000110 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:09:24.247 -08 000000110 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:09:24.247 -08 000000110 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:09:24.309 -08 000000110 INF: Y Motor: Recv v 0\r
17-02-28 20:09:24.309 -08 000000110 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:09:24.309 -08 000000110 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:09:24.309 -08 000000110 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:24.371 -08 000000110 INF: Y Motor: Recv ok\r
17-02-28 20:09:24.371 -08 000000110 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:09:24.371 -08 000000110 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:24.432 -08 000000110 INF: Y Motor: Recv ok\r
17-02-28 20:09:24.432 -08 000000110 INF: ======================================
17-02-28 20:09:24.433 -08 000000052 INF: ===================Move X,Y===================
17-02-28 20:09:24.435 -08 000000052 INF: ======================================
17-02-28 20:09:24.436 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:24.436 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:24.437 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:09:24.437 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:09:24.497 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:09:24.497 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:09:24.555 -08 000000034 INF: FPGA: Recv ZFREQCL
17-02-28 20:09:24.556 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:09:24.556 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:24.556 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:09:24.618 -08 000000066 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:09:24.618 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:09:24.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:24.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:24.620 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:09:24.620 -08 000000076 INF: ===================Set YMotor gains for scans===================
17-02-28 20:09:24.620 -08 000000076 INF: ======================================
17-02-28 20:09:24.620 -08 000000100 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:09:24.621 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:09:24.622 -08 000000100 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:09:24.623 -08 000000100 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:09:24.623 -08 000000100 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:09:24.682 -08 000000083 INF: FPGA: Recv TDIYPOS
17-02-28 20:09:24.682 -08 000000100 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:09:24.684 -08 000000100 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:09:24.684 -08 000000100 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:09:24.743 -08 000000077 INF: FPGA: Recv TDIYARM2
17-02-28 20:09:24.743 -08 000000100 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:09:24.745 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:09:24.746 -08 000000100 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:09:24.746 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:09:24.748 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:09:24.748 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:09:24.749 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:09:25.116 -08 000000100 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:09:25.116 -08 000000100 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:09:25.116 -08 000000100 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:09:25.131 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:09:25.133 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:09:25.512 -08 000000100 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:09:25.512 -08 000000100 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:09:25.512 -08 000000100 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:09:25.527 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:09:25.529 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:09:25.530 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:09:25.531 -08 000000100 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:25.532 -08 000000100 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:09:25.532 -08 000000100 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:25.534 -08 000000100 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:09:25.534 -08 000000100 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:09:25.534 -08 000000100 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:09:25.534 -08 000000100 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:09:25.553 -08 000000111 INF: FPGA: Recv ZYT 
17-02-28 20:09:25.553 -08 000000100 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:09:25.553 -08 000000100 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:09:25.618 -08 000000062 INF: FPGA: Recv ZARM
17-02-28 20:09:25.618 -08 000000100 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.0711 ms
17-02-28 20:09:25.618 -08 000000100 INF: Z Motor: ArmAbsStepped took 83.7738 ms
17-02-28 20:09:25.618 -08 000000100 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:25.620 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:09:25.621 -08 000000100 INF: ======================================
17-02-28 20:09:25.622 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:25.623 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:25.623 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:09:25.623 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:09:25.624 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:09:25.625 -08 000000106 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:09:25.625 -08 000000095 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:09:25.625 -08 000000106 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:09:25.625 -08 000000106 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:09:25.625 -08 000000095 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:09:25.625 -08 000000106 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:09:25.625 -08 000000095 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:09:25.625 -08 000000095 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:09:25.625 -08 000000106 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:09:25.626 -08 000000095 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:09:25.990 -08 000000046 INF: FPGA: Recv EX2MV
17-02-28 20:09:25.990 -08 000000046 INF: FPGA: Recv EX1MV
17-02-28 20:09:25.990 -08 000000095 INF: Excitation Filter 1: Moved -107 steps in 364.7439 ms
17-02-28 20:09:25.990 -08 000000095 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 364.9553 ms
17-02-28 20:09:25.990 -08 000000095 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.0302 ms
17-02-28 20:09:25.990 -08 000000106 INF: Excitation Filter 2: Moved -107 steps in 364.9013 ms
17-02-28 20:09:25.990 -08 000000106 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.359 ms
17-02-28 20:09:25.990 -08 000000106 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.5279 ms
17-02-28 20:09:25.991 -08 000000095 INF: ======================================
17-02-28 20:09:25.991 -08 000000106 INF: ======================================
17-02-28 20:09:25.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:09:25.993 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:09:25.994 -08 000000098 INF: ===================Serial===================
17-02-28 20:09:25.994 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:09:25.994 -08 000000089 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:25.994 -08 000000111 INF: ===================Move Y Motor without settling===================
17-02-28 20:09:25.994 -08 000000111 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:09:25.995 -08 000000111 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:09:25.995 -08 000000111 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:25.995 -08 000000098 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:09:25.995 -08 000000098 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:09:25.995 -08 000000034 INF: ===================Camera TDI, Parallel===================
17-02-28 20:09:25.996 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:09:25.996 -08 000000089 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:09:25.996 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:09:25.996 -08 000000089 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:09:25.997 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:25.997 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:25.998 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:25.998 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:26.057 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:09:26.057 -08 000000111 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:09:26.057 -08 000000111 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:26.118 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:09:26.118 -08 000000111 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:26.147 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:26.147 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:26.148 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:26.148 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:26.180 -08 000000111 INF: Y Motor: Recv v 0\r
17-02-28 20:09:26.180 -08 000000111 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:26.180 -08 000000111 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:09:26.180 -08 000000111 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:09:26.228 -08 000000059 INF: RunCopyService queue size at 2/28/2017 8:09:26 PM is 2
17-02-28 20:09:26.245 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:09:26.245 -08 000000111 INF: Y Motor: Start the move command
17-02-28 20:09:26.245 -08 000000111 INF: Y Motor: Xmit t 1\r
17-02-28 20:09:26.298 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:26.298 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:26.299 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:26.299 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:26.306 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:09:26.306 -08 000000111 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:09:26.306 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:26.433 -08 000000111 INF: Y Motor: Unshifted Position: 5935478
17-02-28 20:09:26.448 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:26.448 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:26.449 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:26.449 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:26.483 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:26.598 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:09:26.598 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:09:26.598 -08 000000087 INF: ===================Camera #0 Frame #1===================
17-02-28 20:09:26.599 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:09:26.599 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:09:26.599 -08 000000047 INF: ===================Camera #2 Frame #1===================
17-02-28 20:09:26.607 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:26.744 -08 000000111 INF: Y Motor: Unshifted Position: 5888678
17-02-28 20:09:26.751 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:09:26.751 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2
17-02-28 20:09:26.751 -08 000000087 INF: ===================Camera #0 Frame #2===================
17-02-28 20:09:26.752 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:09:26.752 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:09:26.752 -08 000000047 INF: ===================Camera #2 Frame #3===================
17-02-28 20:09:26.794 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:26.904 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:09:26.904 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:09:26.904 -08 000000087 INF: ===================Camera #0 Frame #4===================
17-02-28 20:09:26.909 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:09:26.909 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:09:26.909 -08 000000047 INF: ===================Camera #2 Frame #4===================
17-02-28 20:09:26.918 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:27.057 -08 000000111 INF: Y Motor: Unshifted Position: 5841523
17-02-28 20:09:27.060 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:09:27.060 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:09:27.060 -08 000000087 INF: ===================Camera #0 Frame #5===================
17-02-28 20:09:27.062 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:09:27.062 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:09:27.062 -08 000000047 INF: ===================Camera #2 Frame #5===================
17-02-28 20:09:27.107 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:27.115 -08 000000039 INF: FPGA: Recv ZWAIT 
17-02-28 20:09:27.115 -08 000000098 INF: ===================Serial===================
17-02-28 20:09:27.117 -08 000000098 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:09:27.117 -08 000000098 INF: ===================Serial===================
17-02-28 20:09:27.118 -08 000000098 INF: ======================================
17-02-28 20:09:27.177 -08 000000095 INF: FPGA: Recv TDIYWAIT
17-02-28 20:09:27.177 -08 000000089 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:27.179 -08 000000089 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:09:27.180 -08 000000100 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:09:27.180 -08 000000102 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:09:27.180 -08 000000100 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:09:27.180 -08 000000100 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:09:27.180 -08 000000100 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:09:27.180 -08 000000100 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:09:27.180 -08 000000102 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:09:27.180 -08 000000102 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:09:27.180 -08 000000102 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:09:27.181 -08 000000102 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:09:27.213 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:09:27.213 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:09:27.213 -08 000000087 INF: ===================Camera #0 Frame #6===================
17-02-28 20:09:27.215 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:09:27.215 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:09:27.215 -08 000000047 INF: ===================Camera #2 Frame #6===================
17-02-28 20:09:27.216 -08 000000087 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:09:27.217 -08 000000087 INF: ===================CameraTDI Cleanup===================
17-02-28 20:09:27.218 -08 000000047 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:09:27.219 -08 000000047 INF: ===================CameraTDI Cleanup===================
17-02-28 20:09:27.229 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:27.255 -08 000000087 INF: Camera #0 ReleaseBuffer
17-02-28 20:09:27.255 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:09:27.256 -08 000000087 INF: ======================================
17-02-28 20:09:27.266 -08 000000047 INF: Camera #2 ReleaseBuffer
17-02-28 20:09:27.266 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:09:27.267 -08 000000047 INF: ======================================
17-02-28 20:09:27.269 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:09:27.270 -08 000000034 INF: ======================================
17-02-28 20:09:27.366 -08 000000111 INF: Y Motor: Unshifted Position: 5797060
17-02-28 20:09:27.416 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:27.551 -08 000000045 INF: FPGA: Recv EX1MV
17-02-28 20:09:27.551 -08 000000045 INF: FPGA: Recv EX2MV
17-02-28 20:09:27.551 -08 000000102 INF: Excitation Filter 2: Moved 107 steps in 370.8996 ms
17-02-28 20:09:27.551 -08 000000102 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.9897 ms
17-02-28 20:09:27.551 -08 000000100 INF: Excitation Filter 1: Moved 107 steps in 371.1064 ms
17-02-28 20:09:27.551 -08 000000102 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.0726 ms
17-02-28 20:09:27.551 -08 000000100 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.2272 ms
17-02-28 20:09:27.551 -08 000000100 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.3063 ms
17-02-28 20:09:27.552 -08 000000102 INF: ======================================
17-02-28 20:09:27.552 -08 000000100 INF: ======================================
17-02-28 20:09:27.553 -08 000000111 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:09:27.553 -08 000000111 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:09:27.553 -08 000000111 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:27.553 -08 000000089 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:27.554 -08 000000089 INF: ======================================
17-02-28 20:09:27.618 -08 000000111 INF: Y Motor: Recv v 0\r
17-02-28 20:09:27.618 -08 000000111 INF: Y Motor: Moved to 62.9704 after 1312 ms
17-02-28 20:09:27.618 -08 000000111 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:09:27.679 -08 000000111 INF: Y Motor: Recv v 4097\r
17-02-28 20:09:27.679 -08 000000111 INF: Y Motor: Status After move finished OK:
17-02-28 20:09:27.679 -08 000000111 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:27.741 -08 000000111 INF: Y Motor: Recv v 0\r
17-02-28 20:09:27.741 -08 000000111 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:27.741 -08 000000111 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:09:27.803 -08 000000111 INF: Y Motor: Recv v 134217728\r
17-02-28 20:09:27.803 -08 000000111 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:09:27.803 -08 000000111 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:09:27.803 -08 000000111 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:09:27.867 -08 000000111 INF: Y Motor: Recv v 0\r
17-02-28 20:09:27.867 -08 000000111 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:09:27.867 -08 000000111 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:09:27.867 -08 000000111 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:27.929 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:09:27.929 -08 000000111 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:09:27.929 -08 000000111 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:27.990 -08 000000111 INF: Y Motor: Recv ok\r
17-02-28 20:09:27.990 -08 000000111 INF: ======================================
17-02-28 20:09:27.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:09:27.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:09:27.993 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:27.993 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:09:28.050 -08 000000055 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:09:28.050 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:09:28.115 -08 000000032 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:09:28.115 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:09:28.176 -08 000000098 INF: FPGA: Recv ZADCR 2424
17-02-28 20:09:28.176 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:09:28.176 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:09:28.238 -08 000000076 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:09:28.238 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:09:28.238 -08 000000042 INF: TDIScan finished after 6851.6945 ms
17-02-28 20:09:28.238 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:09:28.238 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:09:28.238 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:09:28.302 -08 000000045 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:09:28.302 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:28.303 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:28.304 -08 000000104 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:09:28.304 -08 000000064 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:09:28.304 -08 000000090 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:09:28.304 -08 000000104 INF: ======================================
17-02-28 20:09:28.304 -08 000000090 INF: ======================================
17-02-28 20:09:28.304 -08 000000064 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:09:28.304 -08 000000064 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:09:28.366 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:09:28.366 -08 000000064 INF: ======================================
17-02-28 20:09:28.367 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:28.368 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:28.369 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:09:28.401 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:28.401 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:09:28.434 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:28.434 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:09:28.463 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:28.463 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:09:28.489 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:28.489 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:09:28.490 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:09:28.490 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:09:28.498 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:09:28.498 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:09:28.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:09:29.189 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:09:29.212 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0816573297168496Best Z position at top surface = -0.153067251387868Best Z position at top surface + compensator offset = -0.130367251387868 C:2,L:4,B
17-02-28 20:09:29.213 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.153067251387868
17-02-28 20:09:29.213 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94347
17-02-28 20:09:29.213 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0816573297168496
17-02-28 20:09:29.213 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.59984
17-02-28 20:09:29.213 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0816573297168496.
17-02-28 20:09:29.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:09:29.349 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:09:29.349 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:09:29.361 -08 000000032 INF: FPGA: Recv ZSTEP 
17-02-28 20:09:29.361 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:09:29.363 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:29.363 -08 000000042 INF: Lane 4, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:09:29.363 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:29.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:29.364 -08 000000068 INF: ===================Move Tilt Motor 1===================
17-02-28 20:09:29.364 -08 000000010 INF: ===================Move Tilt Motor 2===================
17-02-28 20:09:29.364 -08 000000069 INF: ===================Move Tilt Motor 3===================
17-02-28 20:09:29.365 -08 000000010 INF: ======================================
17-02-28 20:09:29.365 -08 000000068 INF: ======================================
17-02-28 20:09:29.366 -08 000000069 INF: ======================================
17-02-28 20:09:29.367 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:29.367 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:29.368 -08 000000042 INF: ETF Best Z: -0.08165733 mm (21406 DAC)
17-02-28 20:09:29.368 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:29.369 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:29.369 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:09:29.369 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:29.370 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:29.773 -08 000000042 INF: Swath 1 position calculated to be: {X=76.92318, Y=39.78827} from estimated center X= 77.44199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:09:29.773 -08 000000042 INF: Swath 2 position calculated to be: {X=78.03118, Y=39.78827} from estimated center X= 77.44199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:09:29.779 -08 000000042 INF: Swath 0: Converted transform from (-38.93215, -3.878626) pixels to (-0.013455, -0.00138) mm.
17-02-28 20:09:29.785 -08 000000042 INF: Swath 1: Converted transform from (-67.1185, -3.028518) pixels to (-0.023115, -0.001035) mm.
17-02-28 20:09:29.785 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827===================
17-02-28 20:09:29.786 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827===================
17-02-28 20:09:29.786 -08 000000042 INF: Transformed XStagePosition from 76.92318 mm to 76.9097246266901 mm.
17-02-28 20:09:29.798 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5768978014831 mm.
17-02-28 20:09:29.798 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3768978014831 mm.
17-02-28 20:09:29.798 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.467647801483 mm.
17-02-28 20:09:29.800 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:29.800 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:09:29.801 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:29.801 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = D_1
17-02-28 20:09:29.807 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:29.808 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:29.808 -08 000000058 INF: ===================MoveEmissionFilters===================
17-02-28 20:09:29.808 -08 000000054 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:09:29.808 -08 000000091 INF: ===================Move X,Y===================
17-02-28 20:09:29.809 -08 000000077 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:09:29.809 -08 000000092 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:09:29.809 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:09:29.809 -08 000000054 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:09:29.809 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:09:29.809 -08 000000091 INF: ===================Move X,Y, Parallel===================
17-02-28 20:09:29.809 -08 000000054 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:09:29.809 -08 000000054 INF: Z Motor: Moving to -0.1017 mm, started at -0.0100 mm
17-02-28 20:09:29.810 -08 000000054 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:09:29.810 -08 000000077 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:09:29.810 -08 000000092 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:09:29.810 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:09:29.810 -08 000000057 INF: ===================Move X Motor without settling===================
17-02-28 20:09:29.810 -08 000000083 INF: ===================Move Y Motor without settling===================
17-02-28 20:09:29.810 -08 000000057 INF: X Motor: Xmit PR VM\n
17-02-28 20:09:29.810 -08 000000083 INF: Y Motor: Moving to 64.5769 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:09:29.811 -08 000000083 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:09:29.811 -08 000000072 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:09:29.811 -08 000000010 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:09:29.811 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:29.811 -08 000000037 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:09:29.811 -08 000000052 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:09:29.811 -08 000000052 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:09:29.811 -08 000000068 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:09:29.811 -08 000000072 INF: ======================================
17-02-28 20:09:29.812 -08 000000039 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:09:29.812 -08 000000037 INF: ======================================
17-02-28 20:09:29.812 -08 000000052 INF: ======================================
17-02-28 20:09:29.812 -08 000000039 INF: ======================================
17-02-28 20:09:29.813 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:09:29.813 -08 000000068 INF: ======================================
17-02-28 20:09:29.813 -08 000000077 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:09:29.813 -08 000000092 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:09:29.813 -08 000000037 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:09:29.814 -08 000000089 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:09:29.814 -08 000000037 INF: ======================================
17-02-28 20:09:29.814 -08 000000089 INF: ======================================
17-02-28 20:09:29.814 -08 000000077 INF: ======================================
17-02-28 20:09:29.814 -08 000000010 INF: ======================================
17-02-28 20:09:29.815 -08 000000092 INF: ======================================
17-02-28 20:09:29.815 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:09:29.816 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:09:29.816 -08 000000086 INF: ======================================
17-02-28 20:09:29.817 -08 000000076 INF: ======================================
17-02-28 20:09:29.817 -08 000000058 INF: ======================================
17-02-28 20:09:29.829 -08 000000081 INF: FPGA: Recv ZTRG 
17-02-28 20:09:29.829 -08 000000054 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:09:29.891 -08 000000087 INF: FPGA: Recv ZYT 
17-02-28 20:09:29.891 -08 000000054 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:09:29.891 -08 000000054 INF: FPGA: Xmit ZMV 26648\n
17-02-28 20:09:29.893 -08 000000057 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:09:29.893 -08 000000057 INF: X Motor: Xmit PR VI\n
17-02-28 20:09:29.893 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:09:29.893 -08 000000083 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:09:29.893 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:29.953 -08 000000051 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:09:29.953 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:09:29.955 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:09:29.955 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:29.955 -08 000000057 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:09:29.955 -08 000000057 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:09:29.955 -08 000000057 INF: X Motor: Moving to 76.9097 mm @15.000 mm/sec, started at 77.4814 mm
17-02-28 20:09:29.955 -08 000000057 INF: X Motor: Xmit MA 7336\n
17-02-28 20:09:30.018 -08 000000010 INF: FPGA: Recv ZMV 
17-02-28 20:09:30.018 -08 000000054 INF: Z Motor: MoveAndTrigger 'ZMV' command took 126.9135 ms
17-02-28 20:09:30.018 -08 000000054 INF: FPGA: Xmit ZDACR\n
17-02-28 20:09:30.020 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:09:30.020 -08 000000083 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:30.020 -08 000000057 INF: X Motor: Recv MA 7336\r\n>
17-02-28 20:09:30.020 -08 000000083 INF: Y Motor: Set target position to 5957690 encoder counts
17-02-28 20:09:30.020 -08 000000083 INF: Y Motor: Xmit s r0xca 5957690\r
17-02-28 20:09:30.020 -08 000000057 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:09:30.080 -08 000000086 INF: FPGA: Recv ZDACR 26648
17-02-28 20:09:30.080 -08 000000054 INF: Z Motor: MoveAndTrigger took 270.4 ms w/comms
17-02-28 20:09:30.080 -08 000000054 INF: Z Motor: After move to -0.1017, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:09:30.080 -08 000000054 INF: Z Motor: MoveAbsStepped took 270.5567 ms
17-02-28 20:09:30.080 -08 000000054 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:09:30.082 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:09:30.082 -08 000000054 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:09:30.082 -08 000000083 INF: Y Motor: Start the move command
17-02-28 20:09:30.082 -08 000000083 INF: Y Motor: Xmit t 1\r
17-02-28 20:09:30.083 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:09:30.083 -08 000000087 INF: ===================Camera Arm TDI===================
17-02-28 20:09:30.083 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:30.084 -08 000000087 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:09:30.084 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:09:30.084 -08 000000087 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:09:30.084 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:09:30.085 -08 000000089 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:09:30.142 -08 000000090 INF: FPGA: Recv ZSEL 
17-02-28 20:09:30.142 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:09:30.143 -08 000000089 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:09:30.144 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:09:30.144 -08 000000083 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:09:30.144 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:30.204 -08 000000101 INF: FPGA: Recv TDIBB
17-02-28 20:09:30.204 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:09:30.205 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:09:30.206 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:30.207 -08 000000089 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:09:30.207 -08 000000089 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:09:30.207 -08 000000089 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:09:30.266 -08 000000092 INF: FPGA: Recv ZSTEP 
17-02-28 20:09:30.266 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:30.268 -08 000000083 INF: Y Motor: Unshifted Position: 5878530
17-02-28 20:09:30.268 -08 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:09:30.268 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:30.270 -08 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:09:30.270 -08 000000089 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:09:30.270 -08 000000089 INF: Z Motor: Arming to move to -0.0617 mm
17-02-28 20:09:30.270 -08 000000089 INF: FPGA: Xmit ZYT 6437690 4\n
17-02-28 20:09:30.318 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:30.328 -08 000000066 INF: FPGA: Recv ZYT 
17-02-28 20:09:30.328 -08 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6378530 enc / 63.785 mm / ) = 6437690 enc / 64.377 mm
17-02-28 20:09:30.328 -08 000000089 INF: FPGA: Xmit ZARM 16163\n
17-02-28 20:09:30.390 -08 000000072 INF: FPGA: Recv ZARM
17-02-28 20:09:30.390 -08 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0195 ms
17-02-28 20:09:30.390 -08 000000089 INF: Z Motor: ArmAbsStepped took 119.999 ms
17-02-28 20:09:30.390 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:30.391 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:09:30.393 -08 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:09:30.393 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:09:30.395 -08 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:09:30.395 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:09:30.396 -08 000000089 INF: ======================================
17-02-28 20:09:30.442 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:30.454 -08 000000057 INF: X Motor: Xmit PR ER\n
17-02-28 20:09:30.519 -08 000000057 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:09:30.519 -08 000000057 INF: X Motor: Moved to 76.9102 after 498 ms
17-02-28 20:09:30.519 -08 000000057 INF: ======================================
17-02-28 20:09:30.582 -08 000000083 INF: Y Motor: Unshifted Position: 5957692
17-02-28 20:09:30.582 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:09:30.582 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:30.643 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:09:30.643 -08 000000083 INF: Y Motor: Moved to 64.5769 after 498 ms
17-02-28 20:09:30.643 -08 000000083 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:09:30.705 -08 000000083 INF: Y Motor: Recv v 4096\r
17-02-28 20:09:30.705 -08 000000083 INF: Y Motor: Status After move finished OK:
17-02-28 20:09:30.705 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:30.767 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:09:30.767 -08 000000083 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:30.767 -08 000000083 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:09:30.829 -08 000000083 INF: Y Motor: Recv v 402653184\r
17-02-28 20:09:30.829 -08 000000083 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:09:30.829 -08 000000083 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:09:30.829 -08 000000083 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:09:30.891 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:09:30.891 -08 000000083 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:09:30.891 -08 000000083 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:09:30.891 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:30.956 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:09:30.956 -08 000000083 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:09:30.956 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:31.016 -08 000000087 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:09:31.016 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:09:31.016 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:09:31.018 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:09:31.018 -08 000000083 INF: ======================================
17-02-28 20:09:31.019 -08 000000091 INF: ===================Move X,Y===================
17-02-28 20:09:31.020 -08 000000091 INF: ======================================
17-02-28 20:09:31.031 -08 000000087 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:09:31.033 -08 000000087 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:09:32.048 -08 000000087 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:09:32.048 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:09:32.048 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:09:32.065 -08 000000087 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:09:32.066 -08 000000087 INF: ===================Camera Arm TDI===================
17-02-28 20:09:32.068 -08 000000087 INF: ======================================
17-02-28 20:09:32.069 -08 000000054 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:09:32.070 -08 000000054 INF: ======================================
17-02-28 20:09:32.071 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:32.072 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:32.072 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:09:32.072 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:09:32.140 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:09:32.140 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:09:32.200 -08 000000050 INF: FPGA: Recv ZFREQCL
17-02-28 20:09:32.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:09:32.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:32.200 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:09:32.262 -08 000000037 INF: FPGA: Recv TDIYERD 6457691
17-02-28 20:09:32.262 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457691 counts (64.577 mm)
17-02-28 20:09:32.262 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:32.263 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:32.263 -08 000000095 INF: ===================TDI FPGA Arm===================
17-02-28 20:09:32.263 -08 000000108 INF: ===================Set YMotor gains for scans===================
17-02-28 20:09:32.264 -08 000000108 INF: ======================================
17-02-28 20:09:32.264 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:09:32.265 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:09:32.265 -08 000000095 INF: FPGA: Xmit TDIYPOS 6346765\n
17-02-28 20:09:32.324 -08 000000076 INF: FPGA: Recv TDIYPOS
17-02-28 20:09:32.324 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:09:32.325 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:09:32.326 -08 000000095 INF: FPGA: Xmit TDIYARM3 139264 6437690 1 1\n
17-02-28 20:09:32.389 -08 000000100 INF: FPGA: Recv TDIYARM3
17-02-28 20:09:32.389 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:09:32.390 -08 000000095 INF: ===================TDI FPGA Arm===================
17-02-28 20:09:32.391 -08 000000095 INF: ======================================
17-02-28 20:09:32.392 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:32.393 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:32.393 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:32.393 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:32.394 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:32.395 -08 000000066 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:09:32.395 -08 000000050 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:09:32.395 -08 000000066 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:09:32.395 -08 000000066 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:09:32.395 -08 000000066 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:09:32.395 -08 000000050 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:09:32.395 -08 000000066 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:09:32.395 -08 000000050 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:09:32.395 -08 000000050 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:09:32.396 -08 000000050 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:09:32.761 -08 000000110 INF: FPGA: Recv EX2MV
17-02-28 20:09:32.761 -08 000000110 INF: FPGA: Recv EX1MV
17-02-28 20:09:32.761 -08 000000050 INF: Excitation Filter 1: Moved -107 steps in 365.7084 ms
17-02-28 20:09:32.761 -08 000000066 INF: Excitation Filter 2: Moved -107 steps in 365.8381 ms
17-02-28 20:09:32.761 -08 000000066 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.962 ms
17-02-28 20:09:32.761 -08 000000066 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.0319 ms
17-02-28 20:09:32.761 -08 000000050 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.8419 ms
17-02-28 20:09:32.761 -08 000000050 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.0174 ms
17-02-28 20:09:32.761 -08 000000066 INF: ======================================
17-02-28 20:09:32.761 -08 000000050 INF: ======================================
17-02-28 20:09:32.762 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:32.763 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:32.764 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:09:32.764 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:32.764 -08 000000037 INF: ===================FPGA Z Wait===================
17-02-28 20:09:32.764 -08 000000051 INF: ===================Move Y Motor without settling===================
17-02-28 20:09:32.764 -08 000000037 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:09:32.765 -08 000000051 INF: Y Motor: Moving to 14.9286 mm @6.500 mm/sec, started at 64.5769 mm
17-02-28 20:09:32.765 -08 000000051 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:09:32.765 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:32.765 -08 000000062 INF: ===================Camera TDI, Parallel===================
17-02-28 20:09:32.765 -08 000000045 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:09:32.766 -08 000000045 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:09:32.766 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:09:32.766 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:09:32.767 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:32.767 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:32.768 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:32.768 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:32.828 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:09:32.828 -08 000000051 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:09:32.828 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:32.890 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:09:32.890 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:32.918 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:32.918 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:32.918 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:32.918 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:32.952 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:09:32.952 -08 000000051 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:32.952 -08 000000051 INF: Y Motor: Set target position to 992856 encoder counts
17-02-28 20:09:32.952 -08 000000051 INF: Y Motor: Xmit s r0xca 992856\r
17-02-28 20:09:33.014 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:09:33.014 -08 000000051 INF: Y Motor: Start the move command
17-02-28 20:09:33.014 -08 000000051 INF: Y Motor: Xmit t 1\r
17-02-28 20:09:33.068 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:33.068 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:33.068 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:33.068 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:33.076 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:09:33.076 -08 000000051 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:09:33.076 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:33.136 -08 000000095 INF: FPGA: Recv ZWAIT 
17-02-28 20:09:33.136 -08 000000037 INF: ======================================
17-02-28 20:09:33.200 -08 000000051 INF: Y Motor: Unshifted Position: 5895835
17-02-28 20:09:33.218 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:09:33.218 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:09:33.218 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:09:33.218 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:09:33.218 -08 000000081 INF: ===================Camera #0 Frame #4===================
17-02-28 20:09:33.218 -08 000000086 INF: ===================Camera #2 Frame #5===================
17-02-28 20:09:33.250 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:33.377 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:33.381 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:09:33.381 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:09:33.381 -08 000000081 INF: ===================Camera #0 Frame #10===================
17-02-28 20:09:33.387 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:09:33.387 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:09:33.387 -08 000000086 INF: ===================Camera #2 Frame #11===================
17-02-28 20:09:33.513 -08 000000051 INF: Y Motor: Unshifted Position: 5692171
17-02-28 20:09:33.551 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:09:33.551 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:09:33.551 -08 000000081 INF: ===================Camera #0 Frame #17===================
17-02-28 20:09:33.562 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:09:33.562 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:09:33.562 -08 000000086 INF: ===================Camera #2 Frame #17===================
17-02-28 20:09:33.563 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:33.687 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:33.724 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:09:33.724 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:09:33.724 -08 000000081 INF: ===================Camera #0 Frame #23===================
17-02-28 20:09:33.736 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:09:33.736 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:09:33.736 -08 000000086 INF: ===================Camera #2 Frame #24===================
17-02-28 20:09:33.826 -08 000000051 INF: Y Motor: Unshifted Position: 5488729
17-02-28 20:09:33.876 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:33.894 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:09:33.894 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:09:33.894 -08 000000081 INF: ===================Camera #0 Frame #29===================
17-02-28 20:09:33.913 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:09:33.913 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:09:33.913 -08 000000086 INF: ===================Camera #2 Frame #30===================
17-02-28 20:09:33.999 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:34.064 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:09:34.064 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:09:34.064 -08 000000081 INF: ===================Camera #0 Frame #36===================
17-02-28 20:09:34.087 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:09:34.087 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:09:34.087 -08 000000086 INF: ===================Camera #2 Frame #36===================
17-02-28 20:09:34.138 -08 000000051 INF: Y Motor: Unshifted Position: 5287874
17-02-28 20:09:34.188 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:34.237 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:09:34.237 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:09:34.237 -08 000000081 INF: ===================Camera #0 Frame #42===================
17-02-28 20:09:34.260 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:09:34.260 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:09:34.260 -08 000000086 INF: ===================Camera #2 Frame #43===================
17-02-28 20:09:34.312 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:34.407 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:09:34.407 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:09:34.407 -08 000000081 INF: ===================Camera #0 Frame #48===================
17-02-28 20:09:34.437 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:09:34.437 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:09:34.437 -08 000000086 INF: ===================Camera #2 Frame #49===================
17-02-28 20:09:34.448 -08 000000051 INF: Y Motor: Unshifted Position: 5084206
17-02-28 20:09:34.498 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:34.577 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:09:34.577 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:09:34.577 -08 000000081 INF: ===================Camera #0 Frame #55===================
17-02-28 20:09:34.610 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:09:34.610 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:09:34.610 -08 000000086 INF: ===================Camera #2 Frame #56===================
17-02-28 20:09:34.625 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:34.750 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:09:34.750 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:09:34.750 -08 000000081 INF: ===================Camera #0 Frame #61===================
17-02-28 20:09:34.761 -08 000000051 INF: Y Motor: Unshifted Position: 4880537
17-02-28 20:09:34.787 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:09:34.787 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:09:34.787 -08 000000086 INF: ===================Camera #2 Frame #62===================
17-02-28 20:09:34.811 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:34.920 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:09:34.920 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:09:34.920 -08 000000081 INF: ===================Camera #0 Frame #67===================
17-02-28 20:09:34.935 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:34.960 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:09:34.960 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:09:34.960 -08 000000086 INF: ===================Camera #2 Frame #69===================
17-02-28 20:09:35.074 -08 000000051 INF: Y Motor: Unshifted Position: 4679039
17-02-28 20:09:35.090 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:09:35.090 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:09:35.090 -08 000000081 INF: ===================Camera #0 Frame #73===================
17-02-28 20:09:35.124 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:35.137 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:09:35.137 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:09:35.137 -08 000000086 INF: ===================Camera #2 Frame #75===================
17-02-28 20:09:35.248 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:35.260 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:09:35.260 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:09:35.260 -08 000000081 INF: ===================Camera #0 Frame #80===================
17-02-28 20:09:35.312 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:09:35.312 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:09:35.312 -08 000000086 INF: ===================Camera #2 Frame #82===================
17-02-28 20:09:35.384 -08 000000051 INF: Y Motor: Unshifted Position: 4475357
17-02-28 20:09:35.433 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:09:35.433 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:09:35.433 -08 000000081 INF: ===================Camera #0 Frame #86===================
17-02-28 20:09:35.434 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:35.490 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:09:35.490 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:09:35.490 -08 000000086 INF: ===================Camera #2 Frame #88===================
17-02-28 20:09:35.561 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:35.603 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:09:35.603 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:09:35.603 -08 000000081 INF: ===================Camera #0 Frame #92===================
17-02-28 20:09:35.663 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:09:35.663 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:09:35.663 -08 000000086 INF: ===================Camera #2 Frame #95===================
17-02-28 20:09:35.697 -08 000000051 INF: Y Motor: Unshifted Position: 4271910
17-02-28 20:09:35.747 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:35.773 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:09:35.773 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:09:35.773 -08 000000081 INF: ===================Camera #0 Frame #99===================
17-02-28 20:09:35.840 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:09:35.840 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:09:35.840 -08 000000086 INF: ===================Camera #2 Frame #101===================
17-02-28 20:09:35.871 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:35.946 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:09:35.946 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:09:35.946 -08 000000081 INF: ===================Camera #0 Frame #105===================
17-02-28 20:09:36.010 -08 000000051 INF: Y Motor: Unshifted Position: 4069108
17-02-28 20:09:36.013 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:09:36.013 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:09:36.013 -08 000000086 INF: ===================Camera #2 Frame #107===================
17-02-28 20:09:36.060 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:36.114 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:09:36.114 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:09:36.114 -08 000000081 INF: ===================Camera #0 Frame #111===================
17-02-28 20:09:36.183 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:09:36.183 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:09:36.183 -08 000000086 INF: ===================Camera #2 Frame #114===================
17-02-28 20:09:36.184 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:36.283 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:09:36.283 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:09:36.283 -08 000000081 INF: ===================Camera #0 Frame #117===================
17-02-28 20:09:36.321 -08 000000051 INF: Y Motor: Unshifted Position: 3866743
17-02-28 20:09:36.358 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:09:36.358 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:09:36.358 -08 000000086 INF: ===================Camera #2 Frame #120===================
17-02-28 20:09:36.371 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:36.453 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:09:36.453 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:09:36.453 -08 000000081 INF: ===================Camera #0 Frame #124===================
17-02-28 20:09:36.498 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:36.531 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:09:36.531 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:09:36.531 -08 000000086 INF: ===================Camera #2 Frame #126===================
17-02-28 20:09:36.626 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:09:36.626 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:09:36.626 -08 000000081 INF: ===================Camera #0 Frame #130===================
17-02-28 20:09:36.635 -08 000000051 INF: Y Motor: Unshifted Position: 3662419
17-02-28 20:09:36.685 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:36.705 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:09:36.705 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:09:36.705 -08 000000086 INF: ===================Camera #2 Frame #133===================
17-02-28 20:09:36.796 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:09:36.796 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:09:36.796 -08 000000081 INF: ===================Camera #0 Frame #136===================
17-02-28 20:09:36.808 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:36.882 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:09:36.882 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:09:36.882 -08 000000086 INF: ===================Camera #2 Frame #139===================
17-02-28 20:09:36.947 -08 000000051 INF: Y Motor: Unshifted Position: 3461575
17-02-28 20:09:36.966 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:09:36.966 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:09:36.966 -08 000000081 INF: ===================Camera #0 Frame #142===================
17-02-28 20:09:36.997 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:37.057 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:09:37.057 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:09:37.057 -08 000000086 INF: ===================Camera #2 Frame #146===================
17-02-28 20:09:37.123 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:37.136 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:09:37.136 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:09:37.136 -08 000000081 INF: ===================Camera #0 Frame #149===================
17-02-28 20:09:37.234 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:09:37.234 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:09:37.234 -08 000000086 INF: ===================Camera #2 Frame #152===================
17-02-28 20:09:37.257 -08 000000051 INF: Y Motor: Unshifted Position: 3258130
17-02-28 20:09:37.307 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:37.309 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:09:37.309 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:09:37.309 -08 000000081 INF: ===================Camera #0 Frame #155===================
17-02-28 20:09:37.407 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 158, frameCount = 159.
17-02-28 20:09:37.407 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 159
17-02-28 20:09:37.407 -08 000000086 INF: ===================Camera #2 Frame #159===================
17-02-28 20:09:37.434 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:37.479 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:09:37.479 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:09:37.479 -08 000000081 INF: ===================Camera #0 Frame #161===================
17-02-28 20:09:37.570 -08 000000051 INF: Y Motor: Unshifted Position: 3054464
17-02-28 20:09:37.584 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:09:37.584 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:09:37.584 -08 000000086 INF: ===================Camera #2 Frame #165===================
17-02-28 20:09:37.620 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:37.649 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:09:37.649 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:09:37.649 -08 000000081 INF: ===================Camera #0 Frame #168===================
17-02-28 20:09:37.744 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:37.757 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 171, frameCount = 172.
17-02-28 20:09:37.757 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 172
17-02-28 20:09:37.757 -08 000000086 INF: ===================Camera #2 Frame #172===================
17-02-28 20:09:37.822 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:09:37.822 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:09:37.822 -08 000000081 INF: ===================Camera #0 Frame #174===================
17-02-28 20:09:37.881 -08 000000051 INF: Y Motor: Unshifted Position: 2852756
17-02-28 20:09:37.931 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:37.933 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 177, frameCount = 178.
17-02-28 20:09:37.933 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 178
17-02-28 20:09:37.933 -08 000000086 INF: ===================Camera #2 Frame #178===================
17-02-28 20:09:37.992 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:09:37.992 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:09:37.992 -08 000000081 INF: ===================Camera #0 Frame #180===================
17-02-28 20:09:38.055 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:38.106 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184.
17-02-28 20:09:38.106 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184
17-02-28 20:09:38.106 -08 000000086 INF: ===================Camera #2 Frame #184===================
17-02-28 20:09:38.162 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:09:38.162 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:09:38.162 -08 000000081 INF: ===================Camera #0 Frame #186===================
17-02-28 20:09:38.195 -08 000000051 INF: Y Motor: Unshifted Position: 2649953
17-02-28 20:09:38.245 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:38.279 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 190, frameCount = 191.
17-02-28 20:09:38.279 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 191
17-02-28 20:09:38.279 -08 000000086 INF: ===================Camera #2 Frame #191===================
17-02-28 20:09:38.332 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:09:38.332 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:09:38.332 -08 000000081 INF: ===================Camera #0 Frame #193===================
17-02-28 20:09:38.371 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:38.453 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 196, frameCount = 197.
17-02-28 20:09:38.453 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 197
17-02-28 20:09:38.453 -08 000000086 INF: ===================Camera #2 Frame #197===================
17-02-28 20:09:38.505 -08 000000051 INF: Y Motor: Unshifted Position: 2446295
17-02-28 20:09:38.505 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:09:38.505 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:09:38.505 -08 000000081 INF: ===================Camera #0 Frame #199===================
17-02-28 20:09:38.555 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:38.623 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 202, frameCount = 203.
17-02-28 20:09:38.623 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 203
17-02-28 20:09:38.623 -08 000000086 INF: ===================Camera #2 Frame #203===================
17-02-28 20:09:38.674 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:09:38.674 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:09:38.674 -08 000000081 INF: ===================Camera #0 Frame #205===================
17-02-28 20:09:38.679 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:38.794 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210.
17-02-28 20:09:38.794 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210
17-02-28 20:09:38.794 -08 000000086 INF: ===================Camera #2 Frame #210===================
17-02-28 20:09:38.819 -08 000000051 INF: Y Motor: Unshifted Position: 2244142
17-02-28 20:09:38.844 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:09:38.844 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:09:38.844 -08 000000081 INF: ===================Camera #0 Frame #212===================
17-02-28 20:09:38.869 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:38.968 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 215, frameCount = 216.
17-02-28 20:09:38.968 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 216
17-02-28 20:09:38.968 -08 000000086 INF: ===================Camera #2 Frame #216===================
17-02-28 20:09:38.991 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:39.017 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:09:39.017 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:09:39.017 -08 000000081 INF: ===================Camera #0 Frame #218===================
17-02-28 20:09:39.131 -08 000000051 INF: Y Motor: Unshifted Position: 2041126
17-02-28 20:09:39.139 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 221, frameCount = 222.
17-02-28 20:09:39.139 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 222
17-02-28 20:09:39.139 -08 000000086 INF: ===================Camera #2 Frame #222===================
17-02-28 20:09:39.181 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:39.187 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:09:39.187 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:09:39.187 -08 000000081 INF: ===================Camera #0 Frame #224===================
17-02-28 20:09:39.305 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:39.310 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 228, frameCount = 229.
17-02-28 20:09:39.310 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 229
17-02-28 20:09:39.310 -08 000000086 INF: ===================Camera #2 Frame #229===================
17-02-28 20:09:39.357 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:09:39.357 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:09:39.357 -08 000000081 INF: ===================Camera #0 Frame #230===================
17-02-28 20:09:39.441 -08 000000051 INF: Y Motor: Unshifted Position: 1837670
17-02-28 20:09:39.484 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 234, frameCount = 235.
17-02-28 20:09:39.484 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 235
17-02-28 20:09:39.484 -08 000000086 INF: ===================Camera #2 Frame #235===================
17-02-28 20:09:39.491 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:39.527 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:09:39.527 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:09:39.527 -08 000000081 INF: ===================Camera #0 Frame #237===================
17-02-28 20:09:39.615 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:39.655 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 240, frameCount = 241.
17-02-28 20:09:39.655 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 241
17-02-28 20:09:39.655 -08 000000086 INF: ===================Camera #2 Frame #241===================
17-02-28 20:09:39.700 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:09:39.700 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:09:39.700 -08 000000081 INF: ===================Camera #0 Frame #243===================
17-02-28 20:09:39.755 -08 000000051 INF: Y Motor: Unshifted Position: 1635305
17-02-28 20:09:39.805 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:39.825 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:09:39.825 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:09:39.825 -08 000000086 INF: ===================Camera #2 Frame #248===================
17-02-28 20:09:39.870 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:09:39.870 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:09:39.870 -08 000000081 INF: ===================Camera #0 Frame #249===================
17-02-28 20:09:39.929 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:39.999 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 253, frameCount = 254.
17-02-28 20:09:39.999 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 254
17-02-28 20:09:39.999 -08 000000086 INF: ===================Camera #2 Frame #254===================
17-02-28 20:09:40.040 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:09:40.040 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:09:40.040 -08 000000081 INF: ===================Camera #0 Frame #256===================
17-02-28 20:09:40.065 -08 000000051 INF: Y Motor: Unshifted Position: 1431629
17-02-28 20:09:40.115 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:40.170 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 259, frameCount = 260.
17-02-28 20:09:40.170 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 260
17-02-28 20:09:40.170 -08 000000086 INF: ===================Camera #2 Frame #260===================
17-02-28 20:09:40.213 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:09:40.213 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:09:40.213 -08 000000081 INF: ===================Camera #0 Frame #262===================
17-02-28 20:09:40.239 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:40.340 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:09:40.340 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:09:40.340 -08 000000086 INF: ===================Camera #2 Frame #267===================
17-02-28 20:09:40.379 -08 000000051 INF: Y Motor: Unshifted Position: 1227516
17-02-28 20:09:40.383 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:09:40.383 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:09:40.383 -08 000000081 INF: ===================Camera #0 Frame #268===================
17-02-28 20:09:40.429 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:40.501 -08 000000100 INF: FPGA: Recv TDIYWAIT
17-02-28 20:09:40.501 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:40.503 -08 000000045 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:09:40.504 -08 000000101 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:09:40.504 -08 000000098 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:09:40.504 -08 000000101 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:09:40.504 -08 000000101 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:09:40.504 -08 000000101 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:09:40.504 -08 000000098 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:09:40.504 -08 000000098 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:09:40.504 -08 000000098 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:09:40.504 -08 000000101 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:09:40.505 -08 000000098 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:09:40.514 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:09:40.514 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:09:40.514 -08 000000086 INF: ===================Camera #2 Frame #272===================
17-02-28 20:09:40.531 -08 000000086 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:09:40.532 -08 000000086 INF: ===================CameraTDI Cleanup===================
17-02-28 20:09:40.553 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:40.689 -08 000000051 INF: Y Motor: Unshifted Position: 1025812
17-02-28 20:09:40.729 -08 000000086 INF: Camera #2 ReleaseBuffer
17-02-28 20:09:40.729 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:09:40.729 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:09:40.729 -08 000000081 INF: ===================Camera #0 Frame #272===================
17-02-28 20:09:40.729 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:09:40.739 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:40.742 -08 000000081 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:09:40.743 -08 000000081 INF: ===================CameraTDI Cleanup===================
17-02-28 20:09:40.762 -08 000000086 INF: ======================================
17-02-28 20:09:40.879 -08 000000051 INF: Y Motor: Unshifted Position: 992857
17-02-28 20:09:40.879 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:09:40.879 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:40.879 -08 000000064 INF: FPGA: Recv EX1MV
17-02-28 20:09:40.879 -08 000000064 INF: FPGA: Recv EX2MV
17-02-28 20:09:40.880 -08 000000098 INF: Excitation Filter 2: Moved 107 steps in 375.4916 ms
17-02-28 20:09:40.880 -08 000000098 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 375.5893 ms
17-02-28 20:09:40.880 -08 000000098 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 375.6657 ms
17-02-28 20:09:40.880 -08 000000101 INF: Excitation Filter 1: Moved 107 steps in 375.6782 ms
17-02-28 20:09:40.880 -08 000000101 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 375.8732 ms
17-02-28 20:09:40.880 -08 000000101 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 375.9398 ms
17-02-28 20:09:40.880 -08 000000098 INF: ======================================
17-02-28 20:09:40.880 -08 000000101 INF: ======================================
17-02-28 20:09:40.881 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:40.883 -08 000000045 INF: ======================================
17-02-28 20:09:40.911 -08 000000081 INF: Camera #0 ReleaseBuffer
17-02-28 20:09:40.911 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:09:40.939 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:09:40.939 -08 000000051 INF: Y Motor: Moved to 14.9286 after 7862 ms
17-02-28 20:09:40.939 -08 000000051 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:09:40.945 -08 000000081 INF: ======================================
17-02-28 20:09:40.946 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:09:40.947 -08 000000062 INF: ======================================
17-02-28 20:09:41.001 -08 000000051 INF: Y Motor: Recv v 4097\r
17-02-28 20:09:41.001 -08 000000051 INF: Y Motor: Status After move finished OK:
17-02-28 20:09:41.001 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:41.064 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:09:41.064 -08 000000051 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:41.064 -08 000000051 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:09:41.125 -08 000000051 INF: Y Motor: Recv v 134217728\r
17-02-28 20:09:41.125 -08 000000051 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:09:41.125 -08 000000051 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:09:41.125 -08 000000051 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:09:41.191 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:09:41.191 -08 000000051 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:09:41.191 -08 000000051 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:09:41.191 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:41.250 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:09:41.250 -08 000000051 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:09:41.250 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:41.315 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:09:41.315 -08 000000051 INF: ======================================
17-02-28 20:09:41.316 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:41.317 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:41.318 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:41.318 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:09:41.375 -08 000000064 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:09:41.375 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:09:41.437 -08 000000083 INF: FPGA: Recv TDIYERD 1492857
17-02-28 20:09:41.437 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:09:41.499 -08 000000092 INF: FPGA: Recv ZADCR 21180
17-02-28 20:09:41.499 -08 000000042 INF: At scan end Y pos = 14.929 and Z pos = -0.081. Y moved -48.539 mm
17-02-28 20:09:41.499 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:09:41.561 -08 000000106 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:09:41.561 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:09:41.561 -08 000000042 INF: TDIScan finished after 11774.0468 ms
17-02-28 20:09:41.561 -08 000000042 INF: Image[0]: Y should trigger at 63.468 mm, 2nd row was at 64.376 mm (error = 0.909 mm)
17-02-28 20:09:41.561 -08 000000042 INF: Image[2]: Y should trigger at 63.468 mm, 2nd row was at 64.376 mm (error = 0.909 mm)
17-02-28 20:09:41.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:41.596 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.586 um
17-02-28 20:09:41.596 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:41.597 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:09:41.623 -08 000000102 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:09:41.624 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:41.624 -08 000000057 INF: ===================Dither Clean Up Command===================
17-02-28 20:09:41.624 -08 000000052 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:09:41.625 -08 000000101 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:09:41.625 -08 000000059 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:09:41.625 -08 000000101 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:09:41.625 -08 000000052 INF: ======================================
17-02-28 20:09:41.625 -08 000000101 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:09:41.625 -08 000000059 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:09:41.625 -08 000000059 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:09:41.625 -08 000000068 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:09:41.625 -08 000000109 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:09:41.626 -08 000000109 INF: ======================================
17-02-28 20:09:41.626 -08 000000068 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:09:41.686 -08 000000108 INF: FPGA: Recv ZSTEP 
17-02-28 20:09:41.686 -08 000000108 INF: FPGA: Recv ZSEL 
17-02-28 20:09:41.686 -08 000000068 INF: FPGA: Xmit ZDACW 26648\n
17-02-28 20:09:41.686 -08 000000059 INF: ======================================
17-02-28 20:09:41.689 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:09:41.689 -08 000000101 INF: ======================================
17-02-28 20:09:41.747 -08 000000055 INF: FPGA: Recv ZDACW 
17-02-28 20:09:41.747 -08 000000068 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:09:41.747 -08 000000068 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:09:41.813 -08 000000047 INF: FPGA: Recv TDIBB
17-02-28 20:09:41.813 -08 000000068 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:09:41.814 -08 000000068 INF: ======================================
17-02-28 20:09:41.815 -08 000000057 INF: ======================================
17-02-28 20:09:41.816 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:41.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:09:41.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:41.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:09:41.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:41.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:09:41.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:41.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:09:41.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:41.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827===================
17-02-28 20:09:41.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827===================
17-02-28 20:09:41.819 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:09:41.819 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:09:41.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:09:41.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827===================
17-02-28 20:09:41.842 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:09:41.843 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:41.843 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:41.843 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827===================
17-02-28 20:09:41.843 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:09:41.843 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827===================
17-02-28 20:09:41.844 -08 000000042 INF: Transformed XStagePosition from 78.03118 mm to 78.008066335693 mm.
17-02-28 20:09:41.856 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5772428015489 mm.
17-02-28 20:09:41.856 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3772428015489 mm.
17-02-28 20:09:41.856 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4679928015489 mm.
17-02-28 20:09:41.858 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:41.859 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:09:41.859 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:41.859 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -101.7 um, section = D_1
17-02-28 20:09:41.893 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:41.894 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:41.908 -08 000000034 INF: ===================Move X,Y===================
17-02-28 20:09:41.909 -08 000000069 INF: ===================MoveEmissionFilters===================
17-02-28 20:09:41.909 -08 000000034 INF: ===================Move X,Y, Parallel===================
17-02-28 20:09:41.914 -08 000000032 INF: ===================Move X Motor without settling===================
17-02-28 20:09:41.914 -08 000000032 INF: X Motor: Xmit PR VM\n
17-02-28 20:09:41.916 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:09:41.917 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2101 Request: {"Cycle":2,"Lane":4,"Tile":2101,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF204","HCSMMF202","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:41.917 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:09:41.918 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:09:41.919 -08 000000059 INF: ===================Move Y Motor without settling===================
17-02-28 20:09:41.919 -08 000000059 INF: Y Motor: Moving to 64.5772 mm @25.000 mm/sec, started at 14.9286 mm
17-02-28 20:09:41.919 -08 000000083 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:09:41.919 -08 000000106 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:09:41.919 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:09:41.919 -08 000000059 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:09:41.919 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:41.920 -08 000000083 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:09:41.921 -08 000000106 INF: ======================================
17-02-28 20:09:41.921 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:09:41.921 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:09:41.922 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:09:41.922 -08 000000101 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:09:41.922 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:09:41.922 -08 000000087 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:09:41.922 -08 000000106 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:09:41.922 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:09:41.923 -08 000000106 INF: ======================================
17-02-28 20:09:41.924 -08 000000087 INF: ======================================
17-02-28 20:09:41.924 -08 000000045 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:09:41.924 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:09:41.924 -08 000000045 INF: ======================================
17-02-28 20:09:41.925 -08 000000092 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:09:41.925 -08 000000092 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:09:41.925 -08 000000106 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:09:41.925 -08 000000092 INF: ======================================
17-02-28 20:09:41.925 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:09:41.927 -08 000000106 INF: ======================================
17-02-28 20:09:41.927 -08 000000078 INF: ======================================
17-02-28 20:09:41.927 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:09:41.927 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:09:41.927 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:09:41.927 -08 000000087 INF: ======================================
17-02-28 20:09:41.927 -08 000000092 INF: ===================Camera Arm TDI===================
17-02-28 20:09:41.928 -08 000000074 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:41.928 -08 000000092 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:09:41.928 -08 000000052 INF: ======================================
17-02-28 20:09:41.929 -08 000000074 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:09:41.929 -08 000000083 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:09:41.929 -08 000000074 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:09:41.929 -08 000000074 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:09:41.929 -08 000000092 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:09:41.930 -08 000000083 INF: ======================================
17-02-28 20:09:41.936 -08 000000076 INF: FPGA: Recv ZSEL 
17-02-28 20:09:41.938 -08 000000074 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:09:41.938 -08 000000074 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:09:41.942 -08 000000045 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:09:41.943 -08 000000045 INF: ======================================
17-02-28 20:09:41.946 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:09:41.948 -08 000000010 INF: ======================================
17-02-28 20:09:41.949 -08 000000069 INF: ======================================
17-02-28 20:09:42.025 -08 000000110 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2111 Request: {"Cycle":2,"Lane":4,"Tile":2111,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF270","HCSMMF200","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.026 -08 000000054 INF: FPGA: Recv TDIBB
17-02-28 20:09:42.026 -08 000000074 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:09:42.028 -08 000000032 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:09:42.028 -08 000000032 INF: X Motor: Xmit PR VI\n
17-02-28 20:09:42.028 -08 000000074 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:09:42.028 -08 000000074 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:42.029 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:09:42.029 -08 000000059 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:09:42.029 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:42.030 -08 000000074 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:09:42.030 -08 000000074 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:09:42.030 -08 000000074 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:09:42.052 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2105 Request: {"Cycle":2,"Lane":4,"Tile":2105,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF188","HCSMMF219","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.053 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2113 Request: {"Cycle":2,"Lane":4,"Tile":2113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF261","HCSMMF184","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.055 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2103 Request: {"Cycle":2,"Lane":4,"Tile":2103,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF225","HCSMMF241","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.056 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2106 Request: {"Cycle":2,"Lane":4,"Tile":2106,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF181","HCSMMF220","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.058 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2107 Request: {"Cycle":2,"Lane":4,"Tile":2107,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF185","HCSMMF268","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.059 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2109 Request: {"Cycle":2,"Lane":4,"Tile":2109,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF247","HCSMMF224","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.059 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2102 Request: {"Cycle":2,"Lane":4,"Tile":2102,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF236","HCSMMF199","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.060 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2108 Request: {"Cycle":2,"Lane":4,"Tile":2108,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF197","HCSMMF283","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.061 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2110 Request: {"Cycle":2,"Lane":4,"Tile":2110,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF203","HCSMMF186","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.062 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2112 Request: {"Cycle":2,"Lane":4,"Tile":2112,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF178","HCSMMF215","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.062 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2116 Request: {"Cycle":2,"Lane":4,"Tile":2116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF233","HCSMMF228","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.063 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2117 Request: {"Cycle":2,"Lane":4,"Tile":2117,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF211","HCSMMF238","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.064 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2104 Request: {"Cycle":2,"Lane":4,"Tile":2104,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF237","HCSMMF240","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.065 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2115 Request: {"Cycle":2,"Lane":4,"Tile":2115,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF210","HCSMMF269","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.065 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2118 Request: {"Cycle":2,"Lane":4,"Tile":2118,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF177","HCSMMF276","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.066 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2119 Request: {"Cycle":2,"Lane":4,"Tile":2119,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF248","HCSMMF191","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.066 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2114 Request: {"Cycle":2,"Lane":4,"Tile":2114,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF217","HCSMMF232","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.068 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2122 Request: {"Cycle":2,"Lane":4,"Tile":2122,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF258","HCSMMF213","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.070 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2121 Request: {"Cycle":2,"Lane":4,"Tile":2121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF281","HCSMMF259","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.071 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2120 Request: {"Cycle":2,"Lane":4,"Tile":2120,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF183","HCSMMF190","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.071 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2125 Request: {"Cycle":2,"Lane":4,"Tile":2125,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF195","HCSMMF275","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.073 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2123 Request: {"Cycle":2,"Lane":4,"Tile":2123,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF227","HCSMMF252","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.076 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2127 Request: {"Cycle":2,"Lane":4,"Tile":2127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF264","HCSMMF226","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.077 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2124 Request: {"Cycle":2,"Lane":4,"Tile":2124,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF256","HCSMMF189","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.079 -08 000000045 INF: FPGA: Recv ZSTEP 
17-02-28 20:09:42.080 -08 000000074 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:42.081 -08 000000032 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:09:42.081 -08 000000032 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:09:42.081 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:09:42.081 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:42.081 -08 000000032 INF: X Motor: Moving to 78.0081 mm @15.000 mm/sec, started at 76.9102 mm
17-02-28 20:09:42.081 -08 000000032 INF: X Motor: Xmit MA 7786\n
17-02-28 20:09:42.081 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2126 Request: {"Cycle":2,"Lane":4,"Tile":2126,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF262","HCSMMF279","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.082 -08 000000074 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:09:42.082 -08 000000074 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:42.083 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2128 Request: {"Cycle":2,"Lane":4,"Tile":2128,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF244","HCSMMF212","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:42.084 -08 000000074 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:09:42.084 -08 000000074 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:09:42.084 -08 000000074 INF: Z Motor: Arming to move to -0.0617 mm
17-02-28 20:09:42.084 -08 000000074 INF: FPGA: Xmit ZYT 6437724 4\n
17-02-28 20:09:42.084 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:42.090 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:09:42.139 -08 000000086 INF: FPGA: Recv ZYT 
17-02-28 20:09:42.139 -08 000000074 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492857 enc / 14.929 mm / ) = 6437724 enc / 64.377 mm
17-02-28 20:09:42.139 -08 000000074 INF: FPGA: Xmit ZARM 16163\n
17-02-28 20:09:42.141 -08 000000032 INF: X Motor: Recv MA 7786\r\n>
17-02-28 20:09:42.141 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:09:42.141 -08 000000059 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:42.141 -08 000000032 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:09:42.141 -08 000000059 INF: Y Motor: Set target position to 5957724 encoder counts
17-02-28 20:09:42.141 -08 000000059 INF: Y Motor: Xmit s r0xca 5957724\r
17-02-28 20:09:42.176 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:42.176 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:09:42.201 -08 000000109 INF: FPGA: Recv ZARM
17-02-28 20:09:42.201 -08 000000074 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.7367 ms
17-02-28 20:09:42.201 -08 000000074 INF: Z Motor: ArmAbsStepped took 117.1581 ms
17-02-28 20:09:42.201 -08 000000074 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:42.203 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:09:42.203 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:09:42.203 -08 000000059 INF: Y Motor: Start the move command
17-02-28 20:09:42.203 -08 000000059 INF: Y Motor: Xmit t 1\r
17-02-28 20:09:42.204 -08 000000074 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:09:42.204 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:09:42.206 -08 000000074 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:09:42.206 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:09:42.207 -08 000000074 INF: ======================================
17-02-28 20:09:42.212 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:42.218 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:09:42.265 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:09:42.265 -08 000000059 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:09:42.265 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:42.295 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:42.301 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:09:42.389 -08 000000059 INF: Y Motor: Unshifted Position: 1074285
17-02-28 20:09:42.397 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:42.402 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:09:42.439 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:42.504 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:42.525 -08 000000092 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:09:42.525 -08 000000092 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:09:42.525 -08 000000092 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:09:42.540 -08 000000092 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:09:42.542 -08 000000092 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:09:42.567 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:42.703 -08 000000059 INF: Y Motor: Unshifted Position: 1777023
17-02-28 20:09:42.753 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:42.766 -08 000000032 INF: X Motor: Xmit PR ER\n
17-02-28 20:09:42.790 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:09:42.827 -08 000000032 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:09:42.827 -08 000000032 INF: X Motor: Moved to 78.0088 after 686 ms
17-02-28 20:09:42.827 -08 000000032 INF: ======================================
17-02-28 20:09:42.877 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:43.017 -08 000000059 INF: Y Motor: Unshifted Position: 2557870
17-02-28 20:09:43.067 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:43.144 -08 000000092 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:09:43.145 -08 000000092 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:09:43.145 -08 000000092 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:09:43.161 -08 000000092 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:09:43.162 -08 000000092 INF: ===================Camera Arm TDI===================
17-02-28 20:09:43.163 -08 000000092 INF: ======================================
17-02-28 20:09:43.164 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:09:43.165 -08 000000101 INF: ======================================
17-02-28 20:09:43.189 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:43.325 -08 000000059 INF: Y Motor: Unshifted Position: 3341152
17-02-28 20:09:43.375 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:43.503 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:43.639 -08 000000059 INF: Y Motor: Unshifted Position: 4118725
17-02-28 20:09:43.689 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:43.813 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:43.949 -08 000000059 INF: Y Motor: Unshifted Position: 4901162
17-02-28 20:09:43.999 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:44.127 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:44.263 -08 000000059 INF: Y Motor: Unshifted Position: 5678384
17-02-28 20:09:44.313 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:44.437 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:44.575 -08 000000059 INF: Y Motor: Unshifted Position: 5957726
17-02-28 20:09:44.575 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:09:44.575 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:44.635 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:09:44.635 -08 000000059 INF: Y Motor: Moved to 64.5773 after 2370 ms
17-02-28 20:09:44.635 -08 000000059 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:09:44.701 -08 000000059 INF: Y Motor: Recv v 4096\r
17-02-28 20:09:44.701 -08 000000059 INF: Y Motor: Status After move finished OK:
17-02-28 20:09:44.701 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:44.760 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:09:44.760 -08 000000059 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:44.760 -08 000000059 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:09:44.822 -08 000000059 INF: Y Motor: Recv v 402653184\r
17-02-28 20:09:44.822 -08 000000059 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:09:44.822 -08 000000059 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:09:44.822 -08 000000059 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:09:44.887 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:09:44.887 -08 000000059 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:09:44.887 -08 000000059 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:09:44.887 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:44.949 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:09:44.949 -08 000000059 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:09:44.949 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:45.013 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:09:45.013 -08 000000059 INF: ======================================
17-02-28 20:09:45.014 -08 000000034 INF: ===================Move X,Y===================
17-02-28 20:09:45.015 -08 000000034 INF: ======================================
17-02-28 20:09:45.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:45.017 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:45.017 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:09:45.017 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:09:45.074 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:09:45.074 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:09:45.132 -08 000000111 INF: FPGA: Recv ZFREQCL
17-02-28 20:09:45.132 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:09:45.132 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:45.133 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:09:45.197 -08 000000032 INF: FPGA: Recv TDIYERD 6457724
17-02-28 20:09:45.197 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457724 counts (64.577 mm)
17-02-28 20:09:45.198 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:45.198 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:45.199 -08 000000039 INF: ===================TDI FPGA Arm===================
17-02-28 20:09:45.199 -08 000000055 INF: ===================Set YMotor gains for scans===================
17-02-28 20:09:45.199 -08 000000055 INF: ======================================
17-02-28 20:09:45.200 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:09:45.200 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:09:45.200 -08 000000039 INF: FPGA: Xmit TDIYPOS 6346799\n
17-02-28 20:09:45.261 -08 000000066 INF: FPGA: Recv TDIYPOS
17-02-28 20:09:45.262 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:09:45.263 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:09:45.264 -08 000000039 INF: FPGA: Xmit TDIYARM3 139264 6437724 1 1\n
17-02-28 20:09:45.321 -08 000000051 INF: FPGA: Recv TDIYARM3
17-02-28 20:09:45.321 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:09:45.322 -08 000000039 INF: ===================TDI FPGA Arm===================
17-02-28 20:09:45.324 -08 000000039 INF: ======================================
17-02-28 20:09:45.325 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:45.325 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:45.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:45.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:45.327 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:45.327 -08 000000110 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:09:45.327 -08 000000074 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:09:45.327 -08 000000110 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:09:45.328 -08 000000110 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:09:45.328 -08 000000110 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:09:45.328 -08 000000074 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:09:45.328 -08 000000110 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:09:45.328 -08 000000074 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:09:45.328 -08 000000074 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:09:45.329 -08 000000074 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:09:45.696 -08 000000052 INF: FPGA: Recv EX2MV
17-02-28 20:09:45.696 -08 000000052 INF: FPGA: Recv EX1MV
17-02-28 20:09:45.696 -08 000000074 INF: Excitation Filter 1: Moved -107 steps in 368.2285 ms
17-02-28 20:09:45.696 -08 000000074 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.43 ms
17-02-28 20:09:45.696 -08 000000074 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.5228 ms
17-02-28 20:09:45.696 -08 000000110 INF: Excitation Filter 2: Moved -107 steps in 368.4075 ms
17-02-28 20:09:45.696 -08 000000110 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.8174 ms
17-02-28 20:09:45.696 -08 000000110 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.8911 ms
17-02-28 20:09:45.696 -08 000000074 INF: ======================================
17-02-28 20:09:45.697 -08 000000110 INF: ======================================
17-02-28 20:09:45.698 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:45.699 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:45.700 -08 000000037 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:45.700 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:09:45.700 -08 000000095 INF: ===================FPGA Z Wait===================
17-02-28 20:09:45.700 -08 000000102 INF: ===================Move Y Motor without settling===================
17-02-28 20:09:45.700 -08 000000102 INF: Y Motor: Moving to 14.9289 mm @6.500 mm/sec, started at 64.5773 mm
17-02-28 20:09:45.700 -08 000000102 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:09:45.700 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:45.700 -08 000000095 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:09:45.700 -08 000000037 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:09:45.701 -08 000000077 INF: ===================Camera TDI, Parallel===================
17-02-28 20:09:45.701 -08 000000078 INF: ===================Camera TDI===================
17-02-28 20:09:45.701 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:09:45.703 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:45.703 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:45.703 -08 000000037 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:09:45.704 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:45.704 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:45.760 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:09:45.760 -08 000000102 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:09:45.760 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:45.822 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:09:45.822 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:45.853 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:45.853 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:45.854 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:45.854 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:45.886 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:09:45.886 -08 000000102 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:45.886 -08 000000102 INF: Y Motor: Set target position to 992891 encoder counts
17-02-28 20:09:45.886 -08 000000102 INF: Y Motor: Xmit s r0xca 992891\r
17-02-28 20:09:45.946 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:09:45.946 -08 000000102 INF: Y Motor: Start the move command
17-02-28 20:09:45.946 -08 000000102 INF: Y Motor: Xmit t 1\r
17-02-28 20:09:46.003 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:46.003 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:46.004 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:09:46.004 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:09:46.008 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:09:46.008 -08 000000102 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:09:46.008 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:46.068 -08 000000053 INF: FPGA: Recv ZWAIT 
17-02-28 20:09:46.068 -08 000000095 INF: ======================================
17-02-28 20:09:46.135 -08 000000102 INF: Y Motor: Unshifted Position: 5895871
17-02-28 20:09:46.153 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:09:46.153 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:09:46.153 -08 000000078 INF: ===================Camera #0 Frame #5===================
17-02-28 20:09:46.154 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:09:46.154 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:09:46.154 -08 000000086 INF: ===================Camera #2 Frame #5===================
17-02-28 20:09:46.185 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:46.310 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:46.319 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:09:46.319 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:09:46.319 -08 000000078 INF: ===================Camera #0 Frame #11===================
17-02-28 20:09:46.321 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:09:46.321 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:09:46.321 -08 000000086 INF: ===================Camera #2 Frame #11===================
17-02-28 20:09:46.446 -08 000000102 INF: Y Motor: Unshifted Position: 5691550
17-02-28 20:09:46.488 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:09:46.488 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:09:46.488 -08 000000078 INF: ===================Camera #0 Frame #17===================
17-02-28 20:09:46.490 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:09:46.490 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:09:46.490 -08 000000086 INF: ===================Camera #2 Frame #17===================
17-02-28 20:09:46.496 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:46.620 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:46.656 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:09:46.656 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:09:46.656 -08 000000078 INF: ===================Camera #0 Frame #23===================
17-02-28 20:09:46.659 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:09:46.659 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:09:46.659 -08 000000086 INF: ===================Camera #2 Frame #23===================
17-02-28 20:09:46.759 -08 000000102 INF: Y Motor: Unshifted Position: 5488546
17-02-28 20:09:46.809 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:46.824 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:09:46.824 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:09:46.824 -08 000000078 INF: ===================Camera #0 Frame #29===================
17-02-28 20:09:46.828 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:09:46.828 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:09:46.828 -08 000000086 INF: ===================Camera #2 Frame #29===================
17-02-28 20:09:46.933 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:46.992 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:09:46.992 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:09:46.992 -08 000000078 INF: ===================Camera #0 Frame #35===================
17-02-28 20:09:46.997 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:09:46.997 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:09:46.997 -08 000000086 INF: ===================Camera #2 Frame #36===================
17-02-28 20:09:47.071 -08 000000102 INF: Y Motor: Unshifted Position: 5286393
17-02-28 20:09:47.121 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:47.161 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:09:47.161 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:09:47.161 -08 000000078 INF: ===================Camera #0 Frame #42===================
17-02-28 20:09:47.170 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:09:47.170 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:09:47.170 -08 000000086 INF: ===================Camera #2 Frame #42===================
17-02-28 20:09:47.245 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:47.333 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:09:47.333 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:09:47.333 -08 000000078 INF: ===================Camera #0 Frame #48===================
17-02-28 20:09:47.339 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:09:47.339 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:09:47.339 -08 000000086 INF: ===================Camera #2 Frame #48===================
17-02-28 20:09:47.384 -08 000000102 INF: Y Motor: Unshifted Position: 5084022
17-02-28 20:09:47.434 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:47.502 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:09:47.502 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:09:47.502 -08 000000078 INF: ===================Camera #0 Frame #54===================
17-02-28 20:09:47.508 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:09:47.508 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:09:47.508 -08 000000086 INF: ===================Camera #2 Frame #54===================
17-02-28 20:09:47.558 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:47.671 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:09:47.671 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:09:47.671 -08 000000078 INF: ===================Camera #0 Frame #60===================
17-02-28 20:09:47.677 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:09:47.677 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:09:47.677 -08 000000086 INF: ===================Camera #2 Frame #61===================
17-02-28 20:09:47.695 -08 000000102 INF: Y Motor: Unshifted Position: 4880572
17-02-28 20:09:47.745 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:47.840 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:09:47.840 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:09:47.840 -08 000000078 INF: ===================Camera #0 Frame #67===================
17-02-28 20:09:47.850 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:09:47.850 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:09:47.850 -08 000000086 INF: ===================Camera #2 Frame #67===================
17-02-28 20:09:47.868 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:48.007 -08 000000102 INF: Y Motor: Unshifted Position: 4676903
17-02-28 20:09:48.012 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:09:48.012 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:09:48.012 -08 000000078 INF: ===================Camera #0 Frame #73===================
17-02-28 20:09:48.019 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:09:48.019 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:09:48.019 -08 000000086 INF: ===================Camera #2 Frame #73===================
17-02-28 20:09:48.057 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:48.181 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:09:48.181 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:09:48.181 -08 000000078 INF: ===================Camera #0 Frame #79===================
17-02-28 20:09:48.182 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:48.188 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:09:48.188 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:09:48.188 -08 000000086 INF: ===================Camera #2 Frame #79===================
17-02-28 20:09:48.318 -08 000000102 INF: Y Motor: Unshifted Position: 4474743
17-02-28 20:09:48.350 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:09:48.350 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:09:48.350 -08 000000078 INF: ===================Camera #0 Frame #85===================
17-02-28 20:09:48.357 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:09:48.357 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:09:48.357 -08 000000086 INF: ===================Camera #2 Frame #86===================
17-02-28 20:09:48.368 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:48.492 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:48.519 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:09:48.519 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:09:48.519 -08 000000078 INF: ===================Camera #0 Frame #92===================
17-02-28 20:09:48.529 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:09:48.529 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:09:48.529 -08 000000086 INF: ===================Camera #2 Frame #92===================
17-02-28 20:09:48.631 -08 000000102 INF: Y Motor: Unshifted Position: 4271078
17-02-28 20:09:48.681 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:48.691 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:09:48.691 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:09:48.691 -08 000000078 INF: ===================Camera #0 Frame #98===================
17-02-28 20:09:48.698 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:09:48.698 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:09:48.698 -08 000000086 INF: ===================Camera #2 Frame #98===================
17-02-28 20:09:48.805 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:48.860 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:09:48.860 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:09:48.860 -08 000000078 INF: ===================Camera #0 Frame #104===================
17-02-28 20:09:48.867 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:09:48.867 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:09:48.867 -08 000000086 INF: ===================Camera #2 Frame #104===================
17-02-28 20:09:48.944 -08 000000102 INF: Y Motor: Unshifted Position: 4069572
17-02-28 20:09:48.994 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:49.029 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:09:49.029 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:09:49.029 -08 000000078 INF: ===================Camera #0 Frame #110===================
17-02-28 20:09:49.036 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:09:49.036 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:09:49.036 -08 000000086 INF: ===================Camera #2 Frame #111===================
17-02-28 20:09:49.117 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:49.198 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:09:49.198 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:09:49.198 -08 000000078 INF: ===================Camera #0 Frame #117===================
17-02-28 20:09:49.209 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:09:49.209 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:09:49.209 -08 000000086 INF: ===================Camera #2 Frame #117===================
17-02-28 20:09:49.255 -08 000000102 INF: Y Motor: Unshifted Position: 3865260
17-02-28 20:09:49.305 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:49.370 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:09:49.370 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:09:49.370 -08 000000078 INF: ===================Camera #0 Frame #123===================
17-02-28 20:09:49.378 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:09:49.378 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:09:49.378 -08 000000086 INF: ===================Camera #2 Frame #123===================
17-02-28 20:09:49.429 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:49.539 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:09:49.539 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:09:49.539 -08 000000078 INF: ===================Camera #0 Frame #129===================
17-02-28 20:09:49.547 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:09:49.547 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:09:49.547 -08 000000086 INF: ===================Camera #2 Frame #130===================
17-02-28 20:09:49.565 -08 000000102 INF: Y Motor: Unshifted Position: 3663754
17-02-28 20:09:49.615 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:49.708 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:09:49.708 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:09:49.708 -08 000000078 INF: ===================Camera #0 Frame #135===================
17-02-28 20:09:49.720 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:09:49.720 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:09:49.720 -08 000000086 INF: ===================Camera #2 Frame #136===================
17-02-28 20:09:49.744 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:49.877 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:09:49.877 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:09:49.877 -08 000000078 INF: ===================Camera #0 Frame #142===================
17-02-28 20:09:49.878 -08 000000102 INF: Y Motor: Unshifted Position: 3458142
17-02-28 20:09:49.890 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:09:49.890 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:09:49.890 -08 000000086 INF: ===================Camera #2 Frame #142===================
17-02-28 20:09:49.928 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:50.049 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:09:50.049 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:09:50.049 -08 000000078 INF: ===================Camera #0 Frame #148===================
17-02-28 20:09:50.052 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:50.060 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:09:50.060 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:09:50.060 -08 000000086 INF: ===================Camera #2 Frame #148===================
17-02-28 20:09:50.193 -08 000000102 INF: Y Motor: Unshifted Position: 3256644
17-02-28 20:09:50.218 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:09:50.218 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:09:50.218 -08 000000078 INF: ===================Camera #0 Frame #154===================
17-02-28 20:09:50.230 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:09:50.230 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:09:50.230 -08 000000086 INF: ===================Camera #2 Frame #155===================
17-02-28 20:09:50.243 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:50.365 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:50.387 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:09:50.387 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:09:50.387 -08 000000078 INF: ===================Camera #0 Frame #160===================
17-02-28 20:09:50.403 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:09:50.403 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:09:50.403 -08 000000086 INF: ===================Camera #2 Frame #161===================
17-02-28 20:09:50.501 -08 000000102 INF: Y Motor: Unshifted Position: 3054936
17-02-28 20:09:50.551 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:50.557 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:09:50.557 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:09:50.557 -08 000000078 INF: ===================Camera #0 Frame #167===================
17-02-28 20:09:50.573 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:09:50.573 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:09:50.573 -08 000000086 INF: ===================Camera #2 Frame #167===================
17-02-28 20:09:50.678 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:50.730 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:09:50.730 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:09:50.730 -08 000000078 INF: ===================Camera #0 Frame #173===================
17-02-28 20:09:50.743 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:09:50.743 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:09:50.743 -08 000000086 INF: ===================Camera #2 Frame #174===================
17-02-28 20:09:50.814 -08 000000102 INF: Y Motor: Unshifted Position: 2851486
17-02-28 20:09:50.864 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:50.899 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:09:50.899 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:09:50.899 -08 000000078 INF: ===================Camera #0 Frame #179===================
17-02-28 20:09:50.916 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:09:50.916 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:09:50.916 -08 000000086 INF: ===================Camera #2 Frame #180===================
17-02-28 20:09:50.988 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:51.069 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:09:51.069 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:09:51.069 -08 000000078 INF: ===================Camera #0 Frame #186===================
17-02-28 20:09:51.086 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:09:51.086 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:09:51.086 -08 000000086 INF: ===================Camera #2 Frame #186===================
17-02-28 20:09:51.126 -08 000000102 INF: Y Motor: Unshifted Position: 2648685
17-02-28 20:09:51.176 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:51.242 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:09:51.242 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:09:51.242 -08 000000078 INF: ===================Camera #0 Frame #192===================
17-02-28 20:09:51.256 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:09:51.256 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:09:51.256 -08 000000086 INF: ===================Camera #2 Frame #192===================
17-02-28 20:09:51.300 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:51.411 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:09:51.411 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:09:51.411 -08 000000078 INF: ===================Camera #0 Frame #198===================
17-02-28 20:09:51.426 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:09:51.426 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:09:51.426 -08 000000086 INF: ===================Camera #2 Frame #199===================
17-02-28 20:09:51.440 -08 000000102 INF: Y Motor: Unshifted Position: 2445027
17-02-28 20:09:51.490 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:51.580 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-02-28 20:09:51.580 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-02-28 20:09:51.580 -08 000000078 INF: ===================Camera #0 Frame #204===================
17-02-28 20:09:51.600 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:09:51.600 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:09:51.600 -08 000000086 INF: ===================Camera #2 Frame #205===================
17-02-28 20:09:51.615 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:51.749 -08 000000102 INF: Y Motor: Unshifted Position: 2242877
17-02-28 20:09:51.750 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:09:51.750 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:09:51.750 -08 000000078 INF: ===================Camera #0 Frame #211===================
17-02-28 20:09:51.771 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:09:51.771 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:09:51.771 -08 000000086 INF: ===================Camera #2 Frame #211===================
17-02-28 20:09:51.799 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:51.923 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:09:51.923 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:09:51.923 -08 000000078 INF: ===================Camera #0 Frame #217===================
17-02-28 20:09:51.926 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:51.941 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:09:51.941 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:09:51.941 -08 000000086 INF: ===================Camera #2 Frame #218===================
17-02-28 20:09:52.062 -08 000000102 INF: Y Motor: Unshifted Position: 2039859
17-02-28 20:09:52.093 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:09:52.093 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:09:52.093 -08 000000078 INF: ===================Camera #0 Frame #223===================
17-02-28 20:09:52.112 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:52.113 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:09:52.113 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:09:52.113 -08 000000086 INF: ===================Camera #2 Frame #224===================
17-02-28 20:09:52.236 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:52.263 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:09:52.263 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:09:52.263 -08 000000078 INF: ===================Camera #0 Frame #230===================
17-02-28 20:09:52.283 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:09:52.283 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:09:52.283 -08 000000086 INF: ===================Camera #2 Frame #230===================
17-02-28 20:09:52.375 -08 000000102 INF: Y Motor: Unshifted Position: 1836193
17-02-28 20:09:52.425 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:52.436 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:09:52.436 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:09:52.436 -08 000000078 INF: ===================Camera #0 Frame #236===================
17-02-28 20:09:52.453 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:09:52.453 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:09:52.453 -08 000000086 INF: ===================Camera #2 Frame #237===================
17-02-28 20:09:52.550 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:52.606 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:09:52.606 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:09:52.606 -08 000000078 INF: ===================Camera #0 Frame #242===================
17-02-28 20:09:52.627 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:09:52.627 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:09:52.627 -08 000000086 INF: ===================Camera #2 Frame #243===================
17-02-28 20:09:52.685 -08 000000102 INF: Y Motor: Unshifted Position: 1634037
17-02-28 20:09:52.735 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:52.776 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:09:52.776 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:09:52.776 -08 000000078 INF: ===================Camera #0 Frame #248===================
17-02-28 20:09:52.797 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:09:52.797 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:09:52.797 -08 000000086 INF: ===================Camera #2 Frame #249===================
17-02-28 20:09:52.863 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:52.946 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:09:52.946 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:09:52.946 -08 000000078 INF: ===================Camera #0 Frame #255===================
17-02-28 20:09:52.968 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:09:52.968 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:09:52.968 -08 000000086 INF: ===================Camera #2 Frame #255===================
17-02-28 20:09:52.998 -08 000000102 INF: Y Motor: Unshifted Position: 1431236
17-02-28 20:09:53.048 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:53.119 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:09:53.119 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:09:53.119 -08 000000078 INF: ===================Camera #0 Frame #261===================
17-02-28 20:09:53.139 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:09:53.139 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:09:53.139 -08 000000086 INF: ===================Camera #2 Frame #262===================
17-02-28 20:09:53.172 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:53.289 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:09:53.289 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:09:53.289 -08 000000078 INF: ===================Camera #0 Frame #267===================
17-02-28 20:09:53.311 -08 000000102 INF: Y Motor: Unshifted Position: 1227550
17-02-28 20:09:53.314 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:09:53.314 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:09:53.314 -08 000000086 INF: ===================Camera #2 Frame #268===================
17-02-28 20:09:53.361 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:53.433 -08 000000062 INF: FPGA: Recv TDIYWAIT
17-02-28 20:09:53.433 -08 000000037 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:53.435 -08 000000037 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:09:53.436 -08 000000074 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:09:53.436 -08 000000095 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:09:53.436 -08 000000074 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:09:53.436 -08 000000074 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:09:53.436 -08 000000074 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:09:53.436 -08 000000074 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:09:53.436 -08 000000095 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:09:53.436 -08 000000095 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:09:53.436 -08 000000095 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:09:53.437 -08 000000095 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:09:53.459 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:09:53.459 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:09:53.459 -08 000000078 INF: ===================Camera #0 Frame #272===================
17-02-28 20:09:53.476 -08 000000078 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:09:53.477 -08 000000078 INF: ===================CameraTDI Cleanup===================
17-02-28 20:09:53.485 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:53.491 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:09:53.491 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:09:53.491 -08 000000086 INF: ===================Camera #2 Frame #272===================
17-02-28 20:09:53.505 -08 000000086 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:09:53.506 -08 000000086 INF: ===================CameraTDI Cleanup===================
17-02-28 20:09:53.612 -08 000000078 INF: Camera #0 ReleaseBuffer
17-02-28 20:09:53.612 -08 000000078 INF: ===================Camera TDI===================
17-02-28 20:09:53.621 -08 000000102 INF: Y Motor: Unshifted Position: 1025846
17-02-28 20:09:53.644 -08 000000078 INF: ======================================
17-02-28 20:09:53.671 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:53.780 -08 000000086 INF: Camera #2 ReleaseBuffer
17-02-28 20:09:53.780 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:09:53.808 -08 000000034 INF: FPGA: Recv EX1MV
17-02-28 20:09:53.808 -08 000000034 INF: FPGA: Recv EX2MV
17-02-28 20:09:53.808 -08 000000074 INF: Excitation Filter 1: Moved 107 steps in 372.0249 ms
17-02-28 20:09:53.808 -08 000000095 INF: Excitation Filter 2: Moved 107 steps in 371.888 ms
17-02-28 20:09:53.808 -08 000000074 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.1397 ms
17-02-28 20:09:53.808 -08 000000074 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.2583 ms
17-02-28 20:09:53.808 -08 000000095 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.0252 ms
17-02-28 20:09:53.808 -08 000000095 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.2366 ms
17-02-28 20:09:53.808 -08 000000074 INF: ======================================
17-02-28 20:09:53.808 -08 000000095 INF: ======================================
17-02-28 20:09:53.810 -08 000000102 INF: Y Motor: Unshifted Position: 992890
17-02-28 20:09:53.810 -08 000000037 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:09:53.810 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:09:53.810 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:53.811 -08 000000037 INF: ======================================
17-02-28 20:09:53.814 -08 000000086 INF: ======================================
17-02-28 20:09:53.815 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:09:53.816 -08 000000077 INF: ======================================
17-02-28 20:09:53.872 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:09:53.872 -08 000000102 INF: Y Motor: Moved to 14.9289 after 7863 ms
17-02-28 20:09:53.872 -08 000000102 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:09:53.934 -08 000000102 INF: Y Motor: Recv v 4097\r
17-02-28 20:09:53.934 -08 000000102 INF: Y Motor: Status After move finished OK:
17-02-28 20:09:53.934 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:53.996 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:09:53.996 -08 000000102 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:53.996 -08 000000102 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:09:54.058 -08 000000102 INF: Y Motor: Recv v 134217728\r
17-02-28 20:09:54.058 -08 000000102 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:09:54.058 -08 000000102 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:09:54.058 -08 000000102 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:09:54.120 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:09:54.120 -08 000000102 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:09:54.120 -08 000000102 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:09:54.120 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:54.186 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:09:54.186 -08 000000102 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:09:54.186 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:54.245 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:09:54.245 -08 000000102 INF: ======================================
17-02-28 20:09:54.246 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:54.247 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:09:54.248 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:54.248 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:09:54.308 -08 000000047 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:09:54.308 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:09:54.370 -08 000000110 INF: FPGA: Recv TDIYERD 1492891
17-02-28 20:09:54.370 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:09:54.432 -08 000000087 INF: FPGA: Recv ZADCR 21287
17-02-28 20:09:54.432 -08 000000042 INF: At scan end Y pos = 14.929 and Z pos = -0.082. Y moved -48.539 mm
17-02-28 20:09:54.432 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:09:54.494 -08 000000098 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:09:54.494 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:09:54.494 -08 000000042 INF: TDIScan finished after 12649.905 ms
17-02-28 20:09:54.494 -08 000000042 INF: Image[0]: Y should trigger at 63.468 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:09:54.494 -08 000000042 INF: Image[2]: Y should trigger at 63.468 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:09:54.496 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:54.535 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.551 um
17-02-28 20:09:54.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:54.536 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:09:54.557 -08 000000044 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:09:54.558 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:54.558 -08 000000055 INF: ===================Dither Clean Up Command===================
17-02-28 20:09:54.559 -08 000000051 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:09:54.559 -08 000000052 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:09:54.559 -08 000000076 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:09:54.559 -08 000000051 INF: ======================================
17-02-28 20:09:54.559 -08 000000052 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:09:54.559 -08 000000052 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:09:54.559 -08 000000046 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:09:54.559 -08 000000066 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:09:54.559 -08 000000046 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:09:54.560 -08 000000066 INF: ======================================
17-02-28 20:09:54.560 -08 000000076 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:09:54.561 -08 000000076 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:09:54.618 -08 000000086 INF: FPGA: Recv ZSEL 
17-02-28 20:09:54.618 -08 000000086 INF: FPGA: Recv ZSTEP 
17-02-28 20:09:54.618 -08 000000046 INF: FPGA: Xmit ZDACW 26648\n
17-02-28 20:09:54.618 -08 000000076 INF: ======================================
17-02-28 20:09:54.620 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:09:54.620 -08 000000052 INF: ======================================
17-02-28 20:09:54.680 -08 000000078 INF: FPGA: Recv ZDACW 
17-02-28 20:09:54.680 -08 000000046 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:09:54.680 -08 000000046 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:09:54.742 -08 000000053 INF: FPGA: Recv TDIBB
17-02-28 20:09:54.742 -08 000000046 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:09:54.743 -08 000000046 INF: ======================================
17-02-28 20:09:54.744 -08 000000055 INF: ======================================
17-02-28 20:09:54.745 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:54.747 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:09:54.747 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:54.747 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:09:54.748 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:54.748 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:09:54.748 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:54.748 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:09:54.749 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:09:54.749 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827===================
17-02-28 20:09:54.750 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827===================
17-02-28 20:09:54.751 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:09:54.751 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:09:54.751 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:09:54.751 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827===================
17-02-28 20:09:54.776 -08 000000042 INF: Waited 25 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:09:54.776 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:54.776 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:54.777 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:09:54.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:54.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:09:54.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface===================
17-02-28 20:09:54.797 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:09:54.799 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:09:54.799 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:09:54.799 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:09:54.869 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2203 Request: {"Cycle":2,"Lane":4,"Tile":2203,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF182","HCSMMF253","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:54.926 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:09:54.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:09:54.928 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:09:54.928 -08 000000042 INF: Lane 5, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:09:54.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:09:54.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:09:54.932 -08 000000101 INF: ===================Move Tilt Motor 1===================
17-02-28 20:09:54.932 -08 000000101 INF: ======================================
17-02-28 20:09:54.932 -08 000000111 INF: ===================Move Tilt Motor 3===================
17-02-28 20:09:54.932 -08 000000053 INF: ===================Move Tilt Motor 2===================
17-02-28 20:09:54.933 -08 000000111 INF: ======================================
17-02-28 20:09:54.933 -08 000000053 INF: ======================================
17-02-28 20:09:54.936 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:09:54.938 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:09:55.043 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:09:55.061 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:09:55.062 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:09:55.062 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:09:55.062 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:09:55.064 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:09:55.068 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:09:55.069 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:09:55.069 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:09:55.075 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2202 Request: {"Cycle":2,"Lane":4,"Tile":2202,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF226","HCSMMF244","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.075 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2210 Request: {"Cycle":2,"Lane":4,"Tile":2210,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF273","HCSMMF186","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.077 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2209 Request: {"Cycle":2,"Lane":4,"Tile":2209,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF201","HCSMMF191","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.077 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2201 Request: {"Cycle":2,"Lane":4,"Tile":2201,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF180","HCSMMF285","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.078 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2208 Request: {"Cycle":2,"Lane":4,"Tile":2208,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF277","HCSMMF249","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.079 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2216 Request: {"Cycle":2,"Lane":4,"Tile":2216,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF260","HCSMMF208","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.080 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2211 Request: {"Cycle":2,"Lane":4,"Tile":2211,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF219","HCSMMF246","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.081 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2204 Request: {"Cycle":2,"Lane":4,"Tile":2204,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF232","HCSMMF194","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.081 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2214 Request: {"Cycle":2,"Lane":4,"Tile":2214,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF242","HCSMMF255","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.082 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2206 Request: {"Cycle":2,"Lane":4,"Tile":2206,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF227","HCSMMF257","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.083 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2207 Request: {"Cycle":2,"Lane":4,"Tile":2207,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF264","HCSMMF203","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.083 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2217 Request: {"Cycle":2,"Lane":4,"Tile":2217,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF241","HCSMMF210","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.084 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2205 Request: {"Cycle":2,"Lane":4,"Tile":2205,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF193","HCSMMF286","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.085 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2213 Request: {"Cycle":2,"Lane":4,"Tile":2213,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF284","HCSMMF188","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.086 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2218 Request: {"Cycle":2,"Lane":4,"Tile":2218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF176","HCSMMF276","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.086 -08 000000087 INF: FPGA: Recv ZSTEP 
17-02-28 20:09:55.086 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2223 Request: {"Cycle":2,"Lane":4,"Tile":2223,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF198","HCSMMF220","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.087 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:09:55.087 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:09:55.087 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1017 mm
17-02-28 20:09:55.087 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:09:55.087 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2215 Request: {"Cycle":2,"Lane":4,"Tile":2215,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF238","HCSMMF225","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.088 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2219 Request: {"Cycle":2,"Lane":4,"Tile":2219,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF178","HCSMMF243","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.089 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2212 Request: {"Cycle":2,"Lane":4,"Tile":2212,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF211","HCSMMF248","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.089 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2221 Request: {"Cycle":2,"Lane":4,"Tile":2221,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF196","HCSMMF215","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.090 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2222 Request: {"Cycle":2,"Lane":4,"Tile":2222,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF233","HCSMMF268","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.091 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2225 Request: {"Cycle":2,"Lane":4,"Tile":2225,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF181","HCSMMF275","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.091 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2220 Request: {"Cycle":2,"Lane":4,"Tile":2220,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF230","HCSMMF228","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.092 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2228 Request: {"Cycle":2,"Lane":4,"Tile":2228,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF239","HCSMMF200","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.093 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2227 Request: {"Cycle":2,"Lane":4,"Tile":2227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF199","HCSMMF222","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.095 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2226 Request: {"Cycle":2,"Lane":4,"Tile":2226,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF209","HCSMMF205","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.098 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 2224 Request: {"Cycle":2,"Lane":4,"Tile":2224,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF261","HCSMMF270","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:09:55.100 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:55.106 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:09:55.148 -08 000000044 INF: FPGA: Recv ZTRG 
17-02-28 20:09:55.148 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:09:55.187 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:55.187 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:09:55.210 -08 000000091 INF: FPGA: Recv ZYT 
17-02-28 20:09:55.210 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:09:55.210 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:09:55.225 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:55.230 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:09:55.276 -08 000000055 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:09:55.276 -08 000000055 INF: FPGA: Recv ZMV 
17-02-28 20:09:55.276 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:09:55.276 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 66.1649 ms
17-02-28 20:09:55.276 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:09:55.323 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:55.329 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:09:55.335 -08 000000034 INF: FPGA: Recv ZDACR 60292
17-02-28 20:09:55.335 -08 000000042 INF: Z Motor: MoveAndTrigger took 248.2667 ms w/comms
17-02-28 20:09:55.335 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:09:55.335 -08 000000042 INF: Z Motor: MoveAbsStepped took 248.4294 ms
17-02-28 20:09:55.336 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:09:55.336 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:09:55.345 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:09:55.345 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:09:55.345 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:09:55.345 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:09:55.345 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:09:55.400 -08 000000069 INF: FPGA: Recv ZSTEP 
17-02-28 20:09:55.411 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:09:55.411 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:09:55.419 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:55.420 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:09:55.420 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:09:55.420 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:09:55.424 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:09:55.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:55.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:09:55.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:55.426 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = E_1
17-02-28 20:09:55.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:55.427 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:55.428 -08 000000091 INF: ===================MoveEmissionFilters===================
17-02-28 20:09:55.428 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:09:55.428 -08 000000044 INF: ===================Move X,Y, Parallel===================
17-02-28 20:09:55.429 -08 000000046 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:09:55.429 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:09:55.429 -08 000000109 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:09:55.429 -08 000000104 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:09:55.429 -08 000000047 INF: ===================Move X Motor without settling===================
17-02-28 20:09:55.429 -08 000000098 INF: ===================Move Y Motor without settling===================
17-02-28 20:09:55.429 -08 000000046 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:09:55.429 -08 000000109 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:09:55.429 -08 000000047 INF: X Motor: Xmit PR VM\n
17-02-28 20:09:55.430 -08 000000098 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9289 mm
17-02-28 20:09:55.430 -08 000000104 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:09:55.430 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:09:55.430 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:09:55.430 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:55.430 -08 000000078 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:09:55.430 -08 000000111 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:09:55.431 -08 000000058 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:09:55.431 -08 000000102 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:09:55.431 -08 000000051 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:09:55.431 -08 000000034 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:09:55.431 -08 000000058 INF: ======================================
17-02-28 20:09:55.431 -08 000000051 INF: ======================================
17-02-28 20:09:55.431 -08 000000068 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:09:55.431 -08 000000010 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:09:55.431 -08 000000102 INF: ======================================
17-02-28 20:09:55.432 -08 000000010 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:09:55.432 -08 000000111 INF: ======================================
17-02-28 20:09:55.432 -08 000000010 INF: ======================================
17-02-28 20:09:55.432 -08 000000034 INF: ======================================
17-02-28 20:09:55.432 -08 000000104 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:09:55.433 -08 000000068 INF: ======================================
17-02-28 20:09:55.433 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:09:55.434 -08 000000078 INF: ======================================
17-02-28 20:09:55.434 -08 000000104 INF: ======================================
17-02-28 20:09:55.434 -08 000000046 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:09:55.435 -08 000000052 INF: ======================================
17-02-28 20:09:55.435 -08 000000109 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:09:55.435 -08 000000046 INF: ======================================
17-02-28 20:09:55.436 -08 000000109 INF: ======================================
17-02-28 20:09:55.437 -08 000000091 INF: ======================================
17-02-28 20:09:55.464 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:09:55.464 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:09:55.464 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:55.464 -08 000000047 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:09:55.464 -08 000000047 INF: X Motor: Xmit PR VI\n
17-02-28 20:09:55.520 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:09:55.526 -08 000000047 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:09:55.526 -08 000000047 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:09:55.526 -08 000000047 INF: X Motor: Moving to 80.2456 mm @15.000 mm/sec, started at 78.0088 mm
17-02-28 20:09:55.526 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:09:55.526 -08 000000047 INF: X Motor: Xmit MA 8702\n
17-02-28 20:09:55.526 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:55.588 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:09:55.588 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:55.588 -08 000000098 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:09:55.588 -08 000000098 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:09:55.589 -08 000000047 INF: X Motor: Recv MA 8702\r\n>
17-02-28 20:09:55.589 -08 000000047 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:09:55.651 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:09:55.651 -08 000000098 INF: Y Motor: Start the move command
17-02-28 20:09:55.651 -08 000000098 INF: Y Motor: Xmit t 1\r
17-02-28 20:09:55.712 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:09:55.712 -08 000000098 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:09:55.712 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:55.821 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:09:55.836 -08 000000098 INF: Y Motor: Unshifted Position: 1072640
17-02-28 20:09:55.886 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:56.011 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:56.148 -08 000000098 INF: Y Motor: Unshifted Position: 1782061
17-02-28 20:09:56.199 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:56.215 -08 000000047 INF: X Motor: Xmit PR ER\n
17-02-28 20:09:56.274 -08 000000047 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:09:56.274 -08 000000047 INF: X Motor: Moved to 80.2451 after 684 ms
17-02-28 20:09:56.274 -08 000000047 INF: ======================================
17-02-28 20:09:56.324 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:56.400 -08 000000037 INF: RunCopyService queue size at 2/28/2017 8:09:56 PM is 2
17-02-28 20:09:56.463 -08 000000098 INF: Y Motor: Unshifted Position: 2562081
17-02-28 20:09:56.513 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:56.637 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:56.773 -08 000000098 INF: Y Motor: Unshifted Position: 3340350
17-02-28 20:09:56.823 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:56.950 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:57.087 -08 000000098 INF: Y Motor: Unshifted Position: 4122923
17-02-28 20:09:57.137 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:57.261 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:57.397 -08 000000098 INF: Y Motor: Unshifted Position: 4898693
17-02-28 20:09:57.447 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:57.572 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:57.711 -08 000000098 INF: Y Motor: Unshifted Position: 5682032
17-02-28 20:09:57.761 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:57.888 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:09:58.022 -08 000000098 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:09:58.022 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:09:58.022 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:58.084 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:09:58.084 -08 000000098 INF: Y Motor: Moved to 64.5335 after 2371 ms
17-02-28 20:09:58.084 -08 000000098 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:09:58.146 -08 000000098 INF: Y Motor: Recv v 4096\r
17-02-28 20:09:58.146 -08 000000098 INF: Y Motor: Status After move finished OK:
17-02-28 20:09:58.146 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:09:58.208 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:09:58.208 -08 000000098 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:09:58.208 -08 000000098 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:09:58.274 -08 000000098 INF: Y Motor: Recv v 402653184\r
17-02-28 20:09:58.274 -08 000000098 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:09:58.274 -08 000000098 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:09:58.274 -08 000000098 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:09:58.335 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:09:58.335 -08 000000098 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:09:58.335 -08 000000098 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:09:58.335 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:09:58.397 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:09:58.397 -08 000000098 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:09:58.397 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:09:58.459 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:09:58.459 -08 000000098 INF: ======================================
17-02-28 20:09:58.460 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:09:58.461 -08 000000044 INF: ======================================
17-02-28 20:09:58.463 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:09:58.464 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:58.464 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:09:58.464 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:09:58.521 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:09:58.521 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:09:58.581 -08 000000089 INF: FPGA: Recv ZFREQCL
17-02-28 20:09:58.581 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:09:58.581 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:58.582 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:09:58.644 -08 000000085 INF: FPGA: Recv TDIYERD 6453353
17-02-28 20:09:58.644 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453353 counts (64.534 mm)
17-02-28 20:09:58.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:58.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:58.646 -08 000000046 INF: ===================Set YMotor gains for scans===================
17-02-28 20:09:58.646 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:09:58.647 -08 000000046 INF: ======================================
17-02-28 20:09:58.647 -08 000000101 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:09:58.648 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:09:58.649 -08 000000101 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:09:58.650 -08 000000101 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:09:58.650 -08 000000101 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:09:58.709 -08 000000039 INF: FPGA: Recv TDIYPOS
17-02-28 20:09:58.709 -08 000000101 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:09:58.711 -08 000000101 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:09:58.711 -08 000000101 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:09:58.770 -08 000000092 INF: FPGA: Recv TDIYARM2
17-02-28 20:09:58.771 -08 000000101 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:09:58.772 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:09:58.774 -08 000000101 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:09:58.774 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:09:58.775 -08 000000101 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:09:58.776 -08 000000101 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:09:58.777 -08 000000101 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:09:59.143 -08 000000101 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:09:59.143 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:09:59.143 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:09:59.158 -08 000000101 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:09:59.160 -08 000000101 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:09:59.541 -08 000000101 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:09:59.541 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:09:59.541 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:09:59.556 -08 000000101 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:09:59.558 -08 000000101 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:09:59.559 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:09:59.560 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:59.561 -08 000000101 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:09:59.561 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:59.563 -08 000000101 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:09:59.563 -08 000000101 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:09:59.563 -08 000000101 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:09:59.563 -08 000000101 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:09:59.581 -08 000000081 INF: FPGA: Recv ZYT 
17-02-28 20:09:59.581 -08 000000101 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:09:59.581 -08 000000101 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:09:59.643 -08 000000057 INF: FPGA: Recv ZARM
17-02-28 20:09:59.643 -08 000000101 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.2522 ms
17-02-28 20:09:59.643 -08 000000101 INF: Z Motor: ArmAbsStepped took 80.4021 ms
17-02-28 20:09:59.644 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:09:59.645 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:09:59.646 -08 000000101 INF: ======================================
17-02-28 20:09:59.647 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:09:59.648 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:09:59.648 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:09:59.649 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:09:59.649 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:09:59.650 -08 000000100 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:09:59.650 -08 000000089 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:09:59.650 -08 000000100 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:09:59.650 -08 000000100 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:09:59.650 -08 000000100 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:09:59.650 -08 000000089 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:09:59.650 -08 000000100 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:09:59.650 -08 000000089 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:09:59.650 -08 000000089 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:09:59.653 -08 000000089 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:10:00.018 -08 000000102 INF: FPGA: Recv EX2MV
17-02-28 20:10:00.019 -08 000000100 INF: Excitation Filter 2: Moved -107 steps in 368.2342 ms
17-02-28 20:10:00.019 -08 000000100 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.3612 ms
17-02-28 20:10:00.019 -08 000000100 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.4354 ms
17-02-28 20:10:00.019 -08 000000100 INF: ======================================
17-02-28 20:10:00.078 -08 000000111 INF: FPGA: Recv EX1MV
17-02-28 20:10:00.078 -08 000000089 INF: Excitation Filter 1: Moved -107 steps in 427.3816 ms
17-02-28 20:10:00.078 -08 000000089 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 427.5212 ms
17-02-28 20:10:00.078 -08 000000089 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 427.5983 ms
17-02-28 20:10:00.078 -08 000000089 INF: ======================================
17-02-28 20:10:00.079 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:10:00.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:10:00.082 -08 000000068 INF: ===================Serial===================
17-02-28 20:10:00.082 -08 000000104 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:00.082 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:10:00.082 -08 000000047 INF: ===================Move Y Motor without settling===================
17-02-28 20:10:00.082 -08 000000047 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:10:00.082 -08 000000047 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:10:00.082 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:00.082 -08 000000068 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:10:00.083 -08 000000091 INF: ===================Camera TDI, Parallel===================
17-02-28 20:10:00.083 -08 000000068 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:10:00.083 -08 000000104 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:10:00.084 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:10:00.084 -08 000000044 INF: ===================Camera TDI===================
17-02-28 20:10:00.084 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:00.084 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:00.085 -08 000000044 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:00.085 -08 000000044 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:00.089 -08 000000104 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:10:00.145 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:10:00.145 -08 000000047 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:10:00.145 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:00.205 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:10:00.205 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:00.235 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:00.235 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:00.236 -08 000000044 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:00.236 -08 000000044 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:00.271 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:10:00.271 -08 000000047 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:00.271 -08 000000047 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:10:00.271 -08 000000047 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:10:00.330 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:10:00.330 -08 000000047 INF: Y Motor: Start the move command
17-02-28 20:10:00.330 -08 000000047 INF: Y Motor: Xmit t 1\r
17-02-28 20:10:00.385 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:00.385 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:00.386 -08 000000044 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:00.386 -08 000000044 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:00.392 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:10:00.392 -08 000000047 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:10:00.392 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:00.519 -08 000000047 INF: Y Motor: Unshifted Position: 5934882
17-02-28 20:10:00.535 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:00.535 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:00.536 -08 000000044 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:00.536 -08 000000044 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:00.569 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:00.685 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:10:00.685 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:10:00.685 -08 000000058 INF: ===================Camera #0 Frame #1===================
17-02-28 20:10:00.686 -08 000000044 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:10:00.686 -08 000000044 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:10:00.686 -08 000000044 INF: ===================Camera #2 Frame #1===================
17-02-28 20:10:00.693 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:00.829 -08 000000047 INF: Y Motor: Unshifted Position: 5888329
17-02-28 20:10:00.838 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:10:00.838 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:10:00.838 -08 000000058 INF: ===================Camera #0 Frame #3===================
17-02-28 20:10:00.839 -08 000000044 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:10:00.839 -08 000000044 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:10:00.839 -08 000000044 INF: ===================Camera #2 Frame #3===================
17-02-28 20:10:00.879 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:00.994 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:10:00.994 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:10:00.994 -08 000000058 INF: ===================Camera #0 Frame #4===================
17-02-28 20:10:00.995 -08 000000044 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:10:00.995 -08 000000044 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:10:00.995 -08 000000044 INF: ===================Camera #2 Frame #4===================
17-02-28 20:10:01.004 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:01.143 -08 000000047 INF: Y Motor: Unshifted Position: 5841223
17-02-28 20:10:01.147 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:10:01.147 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:10:01.147 -08 000000058 INF: ===================Camera #0 Frame #5===================
17-02-28 20:10:01.148 -08 000000044 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:10:01.148 -08 000000044 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:10:01.148 -08 000000044 INF: ===================Camera #2 Frame #5===================
17-02-28 20:10:01.193 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:01.203 -08 000000055 INF: FPGA: Recv ZWAIT 
17-02-28 20:10:01.203 -08 000000055 INF: FPGA: Recv TDIYWAIT
17-02-28 20:10:01.203 -08 000000068 INF: ===================Serial===================
17-02-28 20:10:01.203 -08 000000104 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:01.205 -08 000000068 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:10:01.205 -08 000000104 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:10:01.205 -08 000000068 INF: ===================Serial===================
17-02-28 20:10:01.206 -08 000000081 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:10:01.206 -08 000000010 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:10:01.206 -08 000000081 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:10:01.206 -08 000000081 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:10:01.206 -08 000000081 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:10:01.206 -08 000000081 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:10:01.206 -08 000000068 INF: ======================================
17-02-28 20:10:01.206 -08 000000010 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:10:01.206 -08 000000010 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:10:01.207 -08 000000010 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:10:01.207 -08 000000010 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:10:01.300 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:10:01.300 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:10:01.300 -08 000000058 INF: ===================Camera #0 Frame #6===================
17-02-28 20:10:01.301 -08 000000044 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:10:01.301 -08 000000044 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:10:01.301 -08 000000044 INF: ===================Camera #2 Frame #6===================
17-02-28 20:10:01.303 -08 000000058 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:10:01.304 -08 000000044 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:10:01.304 -08 000000058 INF: ===================CameraTDI Cleanup===================
17-02-28 20:10:01.305 -08 000000044 INF: ===================CameraTDI Cleanup===================
17-02-28 20:10:01.317 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:01.329 -08 000000044 INF: Camera #2 ReleaseBuffer
17-02-28 20:10:01.329 -08 000000044 INF: ===================Camera TDI===================
17-02-28 20:10:01.330 -08 000000044 INF: ======================================
17-02-28 20:10:01.353 -08 000000058 INF: Camera #0 ReleaseBuffer
17-02-28 20:10:01.353 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:10:01.354 -08 000000058 INF: ======================================
17-02-28 20:10:01.355 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:10:01.357 -08 000000091 INF: ======================================
17-02-28 20:10:01.453 -08 000000047 INF: Y Motor: Unshifted Position: 5797059
17-02-28 20:10:01.503 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:01.578 -08 000000055 INF: FPGA: Recv EX1MV
17-02-28 20:10:01.578 -08 000000055 INF: FPGA: Recv EX2MV
17-02-28 20:10:01.578 -08 000000010 INF: Excitation Filter 2: Moved 107 steps in 371.285 ms
17-02-28 20:10:01.578 -08 000000010 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.3893 ms
17-02-28 20:10:01.578 -08 000000010 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.4603 ms
17-02-28 20:10:01.578 -08 000000081 INF: Excitation Filter 1: Moved 107 steps in 371.6656 ms
17-02-28 20:10:01.578 -08 000000081 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.8705 ms
17-02-28 20:10:01.578 -08 000000081 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.9443 ms
17-02-28 20:10:01.578 -08 000000010 INF: ======================================
17-02-28 20:10:01.579 -08 000000081 INF: ======================================
17-02-28 20:10:01.580 -08 000000104 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:01.581 -08 000000104 INF: ======================================
17-02-28 20:10:01.642 -08 000000047 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:10:01.642 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:10:01.642 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:01.704 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:10:01.704 -08 000000047 INF: Y Motor: Moved to 62.9704 after 1312 ms
17-02-28 20:10:01.704 -08 000000047 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:10:01.766 -08 000000047 INF: Y Motor: Recv v 4097\r
17-02-28 20:10:01.766 -08 000000047 INF: Y Motor: Status After move finished OK:
17-02-28 20:10:01.766 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:01.828 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:10:01.828 -08 000000047 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:01.828 -08 000000047 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:10:01.892 -08 000000047 INF: Y Motor: Recv v 134217728\r
17-02-28 20:10:01.892 -08 000000047 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:10:01.892 -08 000000047 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:10:01.892 -08 000000047 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:10:01.952 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:10:01.952 -08 000000047 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:10:01.952 -08 000000047 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:10:01.952 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:02.017 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:10:02.017 -08 000000047 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:10:02.017 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:02.079 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:10:02.079 -08 000000047 INF: ======================================
17-02-28 20:10:02.080 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:10:02.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:10:02.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:02.082 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:10:02.139 -08 000000055 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:10:02.139 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:10:02.201 -08 000000051 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:10:02.201 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:10:02.264 -08 000000066 INF: FPGA: Recv ZADCR 2424
17-02-28 20:10:02.264 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:10:02.264 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:10:02.326 -08 000000090 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:10:02.326 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:10:02.326 -08 000000042 INF: TDIScan finished after 6914.1596 ms
17-02-28 20:10:02.326 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:10:02.326 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:10:02.326 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:10:02.388 -08 000000074 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:10:02.389 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:02.389 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:02.390 -08 000000051 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:10:02.390 -08 000000081 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:10:02.390 -08 000000047 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:10:02.390 -08 000000081 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:10:02.390 -08 000000081 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:10:02.390 -08 000000051 INF: ======================================
17-02-28 20:10:02.391 -08 000000047 INF: ======================================
17-02-28 20:10:02.452 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:10:02.452 -08 000000081 INF: ======================================
17-02-28 20:10:02.453 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:02.454 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:02.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:10:02.478 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:02.478 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:10:02.501 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:02.501 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:10:02.527 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:02.527 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:10:02.549 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:02.549 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:10:02.549 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:10:02.550 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:10:02.558 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:10:02.558 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:10:02.558 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:10:03.244 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:10:03.268 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0816611320946032Best Z position at top surface = -0.152987401455043Best Z position at top surface + compensator offset = -0.130287401455043 C:2,L:5,B
17-02-28 20:10:03.268 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.152987401455043
17-02-28 20:10:03.269 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94312
17-02-28 20:10:03.269 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0816611320946032
17-02-28 20:10:03.269 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.59984
17-02-28 20:10:03.269 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0816611320946032.
17-02-28 20:10:03.269 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:10:03.404 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:10:03.404 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:10:03.449 -08 000000054 INF: FPGA: Recv ZSTEP 
17-02-28 20:10:03.449 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:10:03.451 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:10:03.451 -08 000000042 INF: Lane 5, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:10:03.451 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:10:03.452 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:10:03.452 -08 000000053 INF: ===================Move Tilt Motor 1===================
17-02-28 20:10:03.452 -08 000000109 INF: ===================Move Tilt Motor 2===================
17-02-28 20:10:03.453 -08 000000102 INF: ===================Move Tilt Motor 3===================
17-02-28 20:10:03.453 -08 000000053 INF: ======================================
17-02-28 20:10:03.453 -08 000000109 INF: ======================================
17-02-28 20:10:03.453 -08 000000102 INF: ======================================
17-02-28 20:10:03.454 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:10:03.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:10:03.455 -08 000000042 INF: ETF Best Z: -0.08166113 mm (21407 DAC)
17-02-28 20:10:03.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:10:03.456 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:10:03.456 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:10:03.456 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:10:03.457 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:10:03.464 -08 000000042 INF: Swath 1 position calculated to be: {X=79.68818, Y=39.78827} from estimated center X= 80.20699, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:10:03.464 -08 000000042 INF: Swath 2 position calculated to be: {X=80.79618, Y=39.78827} from estimated center X= 80.20699, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:10:03.863 -08 000000042 INF: Swath 0: Converted transform from (-43.81711, -4.529609) pixels to (-0.01518, -0.001725) mm.
17-02-28 20:10:03.869 -08 000000042 INF: Swath 1: Converted transform from (-64.81248, -5.782252) pixels to (-0.022425, -0.00207) mm.
17-02-28 20:10:03.870 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827===================
17-02-28 20:10:03.870 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827===================
17-02-28 20:10:03.870 -08 000000042 INF: Transformed XStagePosition from 79.68818 mm to 79.6729990160093 mm.
17-02-28 20:10:03.882 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5765528015336 mm.
17-02-28 20:10:03.882 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3765528015336 mm.
17-02-28 20:10:03.882 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4673028015336 mm.
17-02-28 20:10:03.884 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:03.884 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:10:03.884 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:03.884 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = E_1
17-02-28 20:10:03.890 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:03.891 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:03.892 -08 000000110 INF: ===================MoveEmissionFilters===================
17-02-28 20:10:03.892 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:10:03.892 -08 000000066 INF: ===================Move X,Y===================
17-02-28 20:10:03.893 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:10:03.893 -08 000000054 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:10:03.893 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:10:03.893 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:10:03.893 -08 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:10:03.893 -08 000000032 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:10:03.893 -08 000000032 INF: Z Motor: Moving to -0.1017 mm, started at -0.0100 mm
17-02-28 20:10:03.893 -08 000000066 INF: ===================Move X,Y, Parallel===================
17-02-28 20:10:03.893 -08 000000032 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:10:03.893 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:10:03.893 -08 000000054 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:10:03.894 -08 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:10:03.894 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:10:03.894 -08 000000104 INF: ===================Move X Motor without settling===================
17-02-28 20:10:03.894 -08 000000081 INF: ===================Move Y Motor without settling===================
17-02-28 20:10:03.894 -08 000000104 INF: X Motor: Xmit PR VM\n
17-02-28 20:10:03.894 -08 000000081 INF: Y Motor: Moving to 64.5766 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:10:03.894 -08 000000053 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:10:03.894 -08 000000109 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:10:03.894 -08 000000081 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:10:03.894 -08 000000081 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:03.894 -08 000000106 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:10:03.895 -08 000000076 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:10:03.895 -08 000000078 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:10:03.895 -08 000000102 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:10:03.895 -08 000000053 INF: ======================================
17-02-28 20:10:03.895 -08 000000098 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:10:03.895 -08 000000047 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:10:03.895 -08 000000078 INF: ======================================
17-02-28 20:10:03.895 -08 000000076 INF: ======================================
17-02-28 20:10:03.895 -08 000000109 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:10:03.896 -08 000000047 INF: ======================================
17-02-28 20:10:03.896 -08 000000109 INF: ======================================
17-02-28 20:10:03.896 -08 000000106 INF: ======================================
17-02-28 20:10:03.896 -08 000000098 INF: ======================================
17-02-28 20:10:03.897 -08 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:10:03.897 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:10:03.897 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:10:03.898 -08 000000102 INF: ======================================
17-02-28 20:10:03.898 -08 000000068 INF: ======================================
17-02-28 20:10:03.898 -08 000000052 INF: ======================================
17-02-28 20:10:03.899 -08 000000034 INF: ======================================
17-02-28 20:10:03.899 -08 000000054 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:10:03.900 -08 000000054 INF: ======================================
17-02-28 20:10:03.901 -08 000000110 INF: ======================================
17-02-28 20:10:03.917 -08 000000074 INF: FPGA: Recv ZTRG 
17-02-28 20:10:03.917 -08 000000032 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:10:03.919 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:10:03.919 -08 000000081 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:10:03.919 -08 000000081 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:03.919 -08 000000104 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:10:03.919 -08 000000104 INF: X Motor: Xmit PR VI\n
17-02-28 20:10:03.979 -08 000000076 INF: FPGA: Recv ZYT 
17-02-28 20:10:03.979 -08 000000032 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:10:03.979 -08 000000032 INF: FPGA: Xmit ZMV 26649\n
17-02-28 20:10:03.981 -08 000000104 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:10:03.981 -08 000000104 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:10:03.981 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:10:03.981 -08 000000104 INF: X Motor: Moving to 79.6730 mm @15.000 mm/sec, started at 80.2451 mm
17-02-28 20:10:03.981 -08 000000081 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:03.981 -08 000000104 INF: X Motor: Xmit MA 8468\n
17-02-28 20:10:04.041 -08 000000095 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:10:04.041 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:10:04.043 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:10:04.043 -08 000000081 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:04.043 -08 000000104 INF: X Motor: Recv MA 8468\r\n>
17-02-28 20:10:04.043 -08 000000081 INF: Y Motor: Set target position to 5957655 encoder counts
17-02-28 20:10:04.043 -08 000000081 INF: Y Motor: Xmit s r0xca 5957655\r
17-02-28 20:10:04.043 -08 000000104 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:10:04.103 -08 000000086 INF: FPGA: Recv ZMV 
17-02-28 20:10:04.103 -08 000000032 INF: Z Motor: MoveAndTrigger 'ZMV' command took 123.9536 ms
17-02-28 20:10:04.103 -08 000000032 INF: FPGA: Xmit ZDACR\n
17-02-28 20:10:04.105 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:10:04.105 -08 000000081 INF: Y Motor: Start the move command
17-02-28 20:10:04.105 -08 000000081 INF: Y Motor: Xmit t 1\r
17-02-28 20:10:04.166 -08 000000074 INF: FPGA: Recv ZDACR 26649
17-02-28 20:10:04.166 -08 000000032 INF: Z Motor: MoveAndTrigger took 272.7243 ms w/comms
17-02-28 20:10:04.166 -08 000000032 INF: Z Motor: After move to -0.1017, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:10:04.166 -08 000000032 INF: Z Motor: MoveAbsStepped took 272.8916 ms
17-02-28 20:10:04.166 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:10:04.167 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:10:04.167 -08 000000081 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:10:04.167 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:04.168 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:10:04.168 -08 000000062 INF: ===================TDI Scan Setup===================
17-02-28 20:10:04.168 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:10:04.169 -08 000000062 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:04.169 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:10:04.170 -08 000000062 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:10:04.170 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:10:04.170 -08 000000062 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:10:04.170 -08 000000062 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:10:04.230 -08 000000053 INF: FPGA: Recv ZSEL 
17-02-28 20:10:04.231 -08 000000062 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:10:04.231 -08 000000062 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:10:04.290 -08 000000051 INF: FPGA: Recv TDIBB
17-02-28 20:10:04.290 -08 000000062 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:10:04.291 -08 000000062 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:10:04.292 -08 000000081 INF: Y Motor: Unshifted Position: 5882314
17-02-28 20:10:04.292 -08 000000062 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:04.293 -08 000000062 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:10:04.293 -08 000000062 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:10:04.293 -08 000000062 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:10:04.342 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:04.355 -08 000000010 INF: FPGA: Recv ZSTEP 
17-02-28 20:10:04.355 -08 000000062 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:04.357 -08 000000062 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:10:04.357 -08 000000062 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:04.359 -08 000000062 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:10:04.359 -08 000000062 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:10:04.359 -08 000000062 INF: Z Motor: Arming to move to -0.0617 mm
17-02-28 20:10:04.359 -08 000000062 INF: FPGA: Xmit ZYT 6437655 4\n
17-02-28 20:10:04.417 -08 000000064 INF: FPGA: Recv ZYT 
17-02-28 20:10:04.417 -08 000000062 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6382314 enc / 63.823 mm / ) = 6437655 enc / 64.377 mm
17-02-28 20:10:04.417 -08 000000062 INF: FPGA: Xmit ZARM 16164\n
17-02-28 20:10:04.469 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:04.479 -08 000000086 INF: FPGA: Recv ZARM
17-02-28 20:10:04.479 -08 000000062 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.969 ms
17-02-28 20:10:04.479 -08 000000062 INF: Z Motor: ArmAbsStepped took 120.0907 ms
17-02-28 20:10:04.479 -08 000000062 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:04.480 -08 000000062 INF: ===================TDI Scan Setup===================
17-02-28 20:10:04.481 -08 000000104 INF: X Motor: Xmit PR ER\n
17-02-28 20:10:04.482 -08 000000062 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:10:04.482 -08 000000062 INF: ===================TDI Scan Setup===================
17-02-28 20:10:04.484 -08 000000062 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:10:04.484 -08 000000062 INF: ===================TDI Scan Setup===================
17-02-28 20:10:04.485 -08 000000062 INF: ======================================
17-02-28 20:10:04.543 -08 000000104 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:10:04.543 -08 000000104 INF: X Motor: Moved to 79.6738 after 500 ms
17-02-28 20:10:04.543 -08 000000104 INF: ======================================
17-02-28 20:10:04.605 -08 000000081 INF: Y Motor: Unshifted Position: 5957656
17-02-28 20:10:04.605 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:10:04.605 -08 000000081 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:04.668 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:10:04.668 -08 000000081 INF: Y Motor: Moved to 64.5766 after 501 ms
17-02-28 20:10:04.668 -08 000000081 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:10:04.729 -08 000000081 INF: Y Motor: Recv v 4096\r
17-02-28 20:10:04.729 -08 000000081 INF: Y Motor: Status After move finished OK:
17-02-28 20:10:04.729 -08 000000081 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:04.791 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:10:04.791 -08 000000081 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:04.791 -08 000000081 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:10:04.856 -08 000000081 INF: Y Motor: Recv v 402653184\r
17-02-28 20:10:04.856 -08 000000081 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:10:04.856 -08 000000081 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:10:04.856 -08 000000081 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:10:04.918 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:10:04.918 -08 000000081 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:10:04.918 -08 000000081 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:10:04.918 -08 000000081 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:04.982 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:10:04.982 -08 000000081 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:10:04.982 -08 000000081 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:05.042 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:10:05.042 -08 000000081 INF: ======================================
17-02-28 20:10:05.043 -08 000000066 INF: ===================Move X,Y===================
17-02-28 20:10:05.044 -08 000000066 INF: ======================================
17-02-28 20:10:05.141 -08 000000045 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:10:05.141 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:10:05.141 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:10:05.156 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:10:05.158 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:10:06.167 -08 000000045 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:10:06.167 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:10:06.167 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:10:06.183 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:10:06.185 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:10:06.186 -08 000000045 INF: ======================================
17-02-28 20:10:06.187 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:10:06.188 -08 000000032 INF: ======================================
17-02-28 20:10:06.189 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:06.190 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:06.190 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:10:06.190 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:10:06.292 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:10:06.292 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:10:06.352 -08 000000034 INF: FPGA: Recv ZFREQCL
17-02-28 20:10:06.352 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:10:06.352 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:06.352 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:10:06.414 -08 000000078 INF: FPGA: Recv TDIYERD 6457656
17-02-28 20:10:06.414 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457656 counts (64.577 mm)
17-02-28 20:10:06.414 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:06.415 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:06.415 -08 000000087 INF: ===================TDI FPGA Arm===================
17-02-28 20:10:06.415 -08 000000055 INF: ===================Set YMotor gains for scans===================
17-02-28 20:10:06.416 -08 000000055 INF: ======================================
17-02-28 20:10:06.416 -08 000000087 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:10:06.417 -08 000000087 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:10:06.417 -08 000000087 INF: FPGA: Xmit TDIYPOS 6346730\n
17-02-28 20:10:06.476 -08 000000051 INF: FPGA: Recv TDIYPOS
17-02-28 20:10:06.476 -08 000000087 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:10:06.477 -08 000000087 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:10:06.478 -08 000000087 INF: FPGA: Xmit TDIYARM3 139264 6437655 1 1\n
17-02-28 20:10:06.538 -08 000000054 INF: FPGA: Recv TDIYARM3
17-02-28 20:10:06.538 -08 000000087 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:10:06.539 -08 000000087 INF: ===================TDI FPGA Arm===================
17-02-28 20:10:06.540 -08 000000087 INF: ======================================
17-02-28 20:10:06.541 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:06.542 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:06.542 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:06.542 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:06.543 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:06.544 -08 000000066 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:10:06.544 -08 000000076 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:10:06.544 -08 000000066 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:10:06.544 -08 000000066 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:10:06.544 -08 000000076 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:10:06.544 -08 000000066 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:10:06.544 -08 000000076 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:10:06.544 -08 000000076 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:10:06.544 -08 000000066 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:10:06.545 -08 000000076 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:10:06.913 -08 000000046 INF: FPGA: Recv EX2MV
17-02-28 20:10:06.913 -08 000000046 INF: FPGA: Recv EX1MV
17-02-28 20:10:06.913 -08 000000076 INF: Excitation Filter 1: Moved -107 steps in 368.6892 ms
17-02-28 20:10:06.913 -08 000000076 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.847 ms
17-02-28 20:10:06.913 -08 000000066 INF: Excitation Filter 2: Moved -107 steps in 368.8931 ms
17-02-28 20:10:06.913 -08 000000066 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.0037 ms
17-02-28 20:10:06.913 -08 000000066 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.0797 ms
17-02-28 20:10:06.913 -08 000000076 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.9162 ms
17-02-28 20:10:06.913 -08 000000066 INF: ======================================
17-02-28 20:10:06.913 -08 000000076 INF: ======================================
17-02-28 20:10:06.914 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:06.915 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:06.916 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:10:06.916 -08 000000089 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:06.916 -08 000000104 INF: ===================FPGA Z Wait===================
17-02-28 20:10:06.916 -08 000000101 INF: ===================Move Y Motor without settling===================
17-02-28 20:10:06.917 -08 000000101 INF: Y Motor: Moving to 14.9282 mm @6.500 mm/sec, started at 64.5766 mm
17-02-28 20:10:06.917 -08 000000101 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:10:06.917 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:06.917 -08 000000074 INF: ===================Camera TDI, Parallel===================
17-02-28 20:10:06.917 -08 000000089 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:10:06.917 -08 000000089 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:10:06.918 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:10:06.918 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:10:06.919 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:06.919 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:06.920 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:06.920 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:06.923 -08 000000104 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:10:06.977 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:10:06.977 -08 000000101 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:10:06.977 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:07.039 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:10:07.039 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:07.069 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:07.069 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:07.070 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:07.070 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:07.101 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:10:07.101 -08 000000101 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:07.101 -08 000000101 INF: Y Motor: Set target position to 992822 encoder counts
17-02-28 20:10:07.101 -08 000000101 INF: Y Motor: Xmit s r0xca 992822\r
17-02-28 20:10:07.163 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:10:07.163 -08 000000101 INF: Y Motor: Start the move command
17-02-28 20:10:07.163 -08 000000101 INF: Y Motor: Xmit t 1\r
17-02-28 20:10:07.219 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:07.219 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:07.220 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:07.220 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:07.228 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:10:07.228 -08 000000101 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:10:07.228 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:07.286 -08 000000057 INF: FPGA: Recv ZWAIT 
17-02-28 20:10:07.286 -08 000000104 INF: ======================================
17-02-28 20:10:07.353 -08 000000101 INF: Y Motor: Unshifted Position: 5894503
17-02-28 20:10:07.369 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:10:07.369 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:10:07.369 -08 000000032 INF: ===================Camera #0 Frame #5===================
17-02-28 20:10:07.370 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:10:07.370 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:10:07.370 -08 000000039 INF: ===================Camera #2 Frame #5===================
17-02-28 20:10:07.403 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:07.527 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:07.536 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:10:07.536 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:10:07.536 -08 000000032 INF: ===================Camera #0 Frame #11===================
17-02-28 20:10:07.537 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:10:07.537 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:10:07.537 -08 000000039 INF: ===================Camera #2 Frame #11===================
17-02-28 20:10:07.663 -08 000000101 INF: Y Motor: Unshifted Position: 5691484
17-02-28 20:10:07.706 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:10:07.706 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:10:07.706 -08 000000032 INF: ===================Camera #0 Frame #17===================
17-02-28 20:10:07.708 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:10:07.708 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:10:07.708 -08 000000039 INF: ===================Camera #2 Frame #17===================
17-02-28 20:10:07.713 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:07.837 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:07.876 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:10:07.876 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:10:07.876 -08 000000032 INF: ===================Camera #0 Frame #23===================
17-02-28 20:10:07.878 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:10:07.878 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:10:07.878 -08 000000039 INF: ===================Camera #2 Frame #23===================
17-02-28 20:10:07.976 -08 000000101 INF: Y Motor: Unshifted Position: 5488045
17-02-28 20:10:08.026 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:08.044 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:10:08.044 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:10:08.044 -08 000000032 INF: ===================Camera #0 Frame #29===================
17-02-28 20:10:08.047 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:10:08.047 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:10:08.047 -08 000000039 INF: ===================Camera #2 Frame #30===================
17-02-28 20:10:08.150 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:08.212 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:10:08.212 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:10:08.212 -08 000000032 INF: ===================Camera #0 Frame #36===================
17-02-28 20:10:08.220 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:10:08.220 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:10:08.220 -08 000000039 INF: ===================Camera #2 Frame #36===================
17-02-28 20:10:08.289 -08 000000101 INF: Y Motor: Unshifted Position: 5286328
17-02-28 20:10:08.339 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:08.384 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:10:08.384 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:10:08.384 -08 000000032 INF: ===================Camera #0 Frame #42===================
17-02-28 20:10:08.389 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:10:08.389 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:10:08.389 -08 000000039 INF: ===================Camera #2 Frame #42===================
17-02-28 20:10:08.461 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:08.552 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:10:08.552 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:10:08.552 -08 000000032 INF: ===================Camera #0 Frame #48===================
17-02-28 20:10:08.558 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:10:08.558 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:10:08.558 -08 000000039 INF: ===================Camera #2 Frame #48===================
17-02-28 20:10:08.602 -08 000000101 INF: Y Motor: Unshifted Position: 5082218
17-02-28 20:10:08.652 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:08.721 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:10:08.721 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:10:08.721 -08 000000032 INF: ===================Camera #0 Frame #54===================
17-02-28 20:10:08.727 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:10:08.727 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:10:08.727 -08 000000039 INF: ===================Camera #2 Frame #55===================
17-02-28 20:10:08.774 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:08.889 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:10:08.889 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:10:08.889 -08 000000032 INF: ===================Camera #0 Frame #61===================
17-02-28 20:10:08.900 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:10:08.900 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:10:08.900 -08 000000039 INF: ===================Camera #2 Frame #61===================
17-02-28 20:10:08.913 -08 000000101 INF: Y Motor: Unshifted Position: 4880502
17-02-28 20:10:08.963 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:09.061 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:10:09.061 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:10:09.061 -08 000000032 INF: ===================Camera #0 Frame #67===================
17-02-28 20:10:09.069 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:10:09.069 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:10:09.069 -08 000000039 INF: ===================Camera #2 Frame #67===================
17-02-28 20:10:09.087 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:09.223 -08 000000101 INF: Y Motor: Unshifted Position: 4677052
17-02-28 20:10:09.230 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:10:09.230 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:10:09.230 -08 000000032 INF: ===================Camera #0 Frame #73===================
17-02-28 20:10:09.238 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:10:09.238 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:10:09.238 -08 000000039 INF: ===================Camera #2 Frame #73===================
17-02-28 20:10:09.273 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:09.397 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:09.399 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:10:09.399 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:10:09.399 -08 000000032 INF: ===================Camera #0 Frame #79===================
17-02-28 20:10:09.407 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:10:09.407 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:10:09.407 -08 000000039 INF: ===================Camera #2 Frame #80===================
17-02-28 20:10:09.536 -08 000000101 INF: Y Motor: Unshifted Position: 4473377
17-02-28 20:10:09.568 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:10:09.568 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:10:09.568 -08 000000032 INF: ===================Camera #0 Frame #86===================
17-02-28 20:10:09.580 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:10:09.580 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:10:09.580 -08 000000039 INF: ===================Camera #2 Frame #86===================
17-02-28 20:10:09.586 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:09.710 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:09.740 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:10:09.740 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:10:09.740 -08 000000032 INF: ===================Camera #0 Frame #92===================
17-02-28 20:10:09.749 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:10:09.749 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:10:09.749 -08 000000039 INF: ===================Camera #2 Frame #92===================
17-02-28 20:10:09.846 -08 000000101 INF: Y Motor: Unshifted Position: 4271653
17-02-28 20:10:09.896 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:09.909 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:10:09.909 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:10:09.909 -08 000000032 INF: ===================Camera #0 Frame #98===================
17-02-28 20:10:09.919 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:10:09.919 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:10:09.919 -08 000000039 INF: ===================Camera #2 Frame #98===================
17-02-28 20:10:10.023 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:10.078 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:10:10.078 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:10:10.078 -08 000000032 INF: ===================Camera #0 Frame #104===================
17-02-28 20:10:10.089 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:10:10.089 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:10:10.089 -08 000000039 INF: ===================Camera #2 Frame #105===================
17-02-28 20:10:10.159 -08 000000101 INF: Y Motor: Unshifted Position: 4068206
17-02-28 20:10:10.209 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:10.247 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:10:10.247 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:10:10.247 -08 000000032 INF: ===================Camera #0 Frame #111===================
17-02-28 20:10:10.262 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:10:10.262 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:10:10.262 -08 000000039 INF: ===================Camera #2 Frame #111===================
17-02-28 20:10:10.333 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:10.419 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:10:10.419 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:10:10.419 -08 000000032 INF: ===================Camera #0 Frame #117===================
17-02-28 20:10:10.432 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:10:10.432 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:10:10.432 -08 000000039 INF: ===================Camera #2 Frame #117===================
17-02-28 20:10:10.472 -08 000000101 INF: Y Motor: Unshifted Position: 3864755
17-02-28 20:10:10.522 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:10.588 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:10:10.588 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:10:10.588 -08 000000032 INF: ===================Camera #0 Frame #123===================
17-02-28 20:10:10.602 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:10:10.602 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:10:10.602 -08 000000039 INF: ===================Camera #2 Frame #124===================
17-02-28 20:10:10.646 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:10.757 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:10:10.757 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:10:10.757 -08 000000032 INF: ===================Camera #0 Frame #129===================
17-02-28 20:10:10.776 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:10:10.776 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:10:10.776 -08 000000039 INF: ===================Camera #2 Frame #130===================
17-02-28 20:10:10.782 -08 000000101 INF: Y Motor: Unshifted Position: 3663035
17-02-28 20:10:10.832 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:10.927 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:10:10.927 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:10:10.927 -08 000000032 INF: ===================Camera #0 Frame #136===================
17-02-28 20:10:10.947 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:10:10.947 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:10:10.947 -08 000000039 INF: ===================Camera #2 Frame #136===================
17-02-28 20:10:10.959 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:11.095 -08 000000101 INF: Y Motor: Unshifted Position: 3459374
17-02-28 20:10:11.100 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:10:11.100 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:10:11.100 -08 000000032 INF: ===================Camera #0 Frame #142===================
17-02-28 20:10:11.117 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:10:11.117 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:10:11.117 -08 000000039 INF: ===================Camera #2 Frame #143===================
17-02-28 20:10:11.145 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:11.269 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:11.269 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:10:11.269 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:10:11.269 -08 000000032 INF: ===================Camera #0 Frame #148===================
17-02-28 20:10:11.291 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:10:11.291 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:10:11.291 -08 000000039 INF: ===================Camera #2 Frame #149===================
17-02-28 20:10:11.406 -08 000000101 INF: Y Motor: Unshifted Position: 3257229
17-02-28 20:10:11.439 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:10:11.439 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:10:11.439 -08 000000032 INF: ===================Camera #0 Frame #154===================
17-02-28 20:10:11.456 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:11.462 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:10:11.462 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:10:11.462 -08 000000039 INF: ===================Camera #2 Frame #155===================
17-02-28 20:10:11.583 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:11.609 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:10:11.609 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:10:11.609 -08 000000032 INF: ===================Camera #0 Frame #161===================
17-02-28 20:10:11.633 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:10:11.633 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:10:11.633 -08 000000039 INF: ===================Camera #2 Frame #162===================
17-02-28 20:10:11.719 -08 000000101 INF: Y Motor: Unshifted Position: 3053562
17-02-28 20:10:11.769 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:11.782 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:10:11.782 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:10:11.782 -08 000000032 INF: ===================Camera #0 Frame #167===================
17-02-28 20:10:11.807 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:10:11.807 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:10:11.807 -08 000000039 INF: ===================Camera #2 Frame #168===================
17-02-28 20:10:11.893 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:11.952 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:10:11.952 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:10:11.952 -08 000000032 INF: ===================Camera #0 Frame #173===================
17-02-28 20:10:11.978 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:10:11.978 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:10:11.978 -08 000000039 INF: ===================Camera #2 Frame #174===================
17-02-28 20:10:12.032 -08 000000101 INF: Y Motor: Unshifted Position: 2850117
17-02-28 20:10:12.082 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:12.122 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:10:12.122 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:10:12.122 -08 000000032 INF: ===================Camera #0 Frame #180===================
17-02-28 20:10:12.149 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:10:12.149 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:10:12.149 -08 000000039 INF: ===================Camera #2 Frame #181===================
17-02-28 20:10:12.206 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:12.295 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:10:12.295 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:10:12.295 -08 000000032 INF: ===================Camera #0 Frame #186===================
17-02-28 20:10:12.323 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:10:12.323 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:10:12.323 -08 000000039 INF: ===================Camera #2 Frame #187===================
17-02-28 20:10:12.342 -08 000000101 INF: Y Motor: Unshifted Position: 2648398
17-02-28 20:10:12.392 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:12.465 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:10:12.465 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:10:12.465 -08 000000032 INF: ===================Camera #0 Frame #192===================
17-02-28 20:10:12.494 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:10:12.494 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:10:12.494 -08 000000039 INF: ===================Camera #2 Frame #193===================
17-02-28 20:10:12.519 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:12.635 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:10:12.635 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:10:12.635 -08 000000032 INF: ===================Camera #0 Frame #198===================
17-02-28 20:10:12.655 -08 000000101 INF: Y Motor: Unshifted Position: 2444953
17-02-28 20:10:12.665 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:10:12.665 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:10:12.665 -08 000000039 INF: ===================Camera #2 Frame #200===================
17-02-28 20:10:12.705 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:12.805 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:10:12.805 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:10:12.805 -08 000000032 INF: ===================Camera #0 Frame #205===================
17-02-28 20:10:12.829 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:12.839 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:10:12.839 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:10:12.839 -08 000000039 INF: ===================Camera #2 Frame #206===================
17-02-28 20:10:12.968 -08 000000101 INF: Y Motor: Unshifted Position: 2241292
17-02-28 20:10:12.978 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:10:12.978 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:10:12.978 -08 000000032 INF: ===================Camera #0 Frame #211===================
17-02-28 20:10:13.010 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:10:13.010 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:10:13.010 -08 000000039 INF: ===================Camera #2 Frame #212===================
17-02-28 20:10:13.018 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:13.142 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:13.148 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:10:13.148 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:10:13.148 -08 000000032 INF: ===================Camera #0 Frame #217===================
17-02-28 20:10:13.179 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:10:13.179 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:10:13.179 -08 000000039 INF: ===================Camera #2 Frame #218===================
17-02-28 20:10:13.278 -08 000000101 INF: Y Motor: Unshifted Position: 2039788
17-02-28 20:10:13.318 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:10:13.318 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:10:13.318 -08 000000032 INF: ===================Camera #0 Frame #224===================
17-02-28 20:10:13.328 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:13.349 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:10:13.349 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:10:13.349 -08 000000039 INF: ===================Camera #2 Frame #225===================
17-02-28 20:10:13.453 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:13.491 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:10:13.491 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:10:13.491 -08 000000032 INF: ===================Camera #0 Frame #230===================
17-02-28 20:10:13.523 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:10:13.523 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:10:13.523 -08 000000039 INF: ===================Camera #2 Frame #231===================
17-02-28 20:10:13.590 -08 000000101 INF: Y Motor: Unshifted Position: 1834819
17-02-28 20:10:13.640 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:13.661 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:10:13.661 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:10:13.661 -08 000000032 INF: ===================Camera #0 Frame #236===================
17-02-28 20:10:13.694 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:10:13.694 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:10:13.694 -08 000000039 INF: ===================Camera #2 Frame #237===================
17-02-28 20:10:13.767 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:13.831 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:10:13.831 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:10:13.831 -08 000000032 INF: ===================Camera #0 Frame #242===================
17-02-28 20:10:13.865 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:10:13.865 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:10:13.865 -08 000000039 INF: ===================Camera #2 Frame #244===================
17-02-28 20:10:13.903 -08 000000101 INF: Y Motor: Unshifted Position: 1633320
17-02-28 20:10:13.953 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:14.001 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:10:14.001 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:10:14.001 -08 000000032 INF: ===================Camera #0 Frame #249===================
17-02-28 20:10:14.039 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:10:14.039 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:10:14.039 -08 000000039 INF: ===================Camera #2 Frame #250===================
17-02-28 20:10:14.077 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:14.174 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:10:14.174 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:10:14.174 -08 000000032 INF: ===================Camera #0 Frame #255===================
17-02-28 20:10:14.210 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:10:14.210 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:10:14.210 -08 000000039 INF: ===================Camera #2 Frame #256===================
17-02-28 20:10:14.214 -08 000000101 INF: Y Motor: Unshifted Position: 1428998
17-02-28 20:10:14.264 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:14.344 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:10:14.344 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:10:14.344 -08 000000032 INF: ===================Camera #0 Frame #261===================
17-02-28 20:10:14.381 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:10:14.381 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:10:14.381 -08 000000039 INF: ===================Camera #2 Frame #263===================
17-02-28 20:10:14.391 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:14.514 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:10:14.514 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:10:14.514 -08 000000032 INF: ===================Camera #0 Frame #268===================
17-02-28 20:10:14.526 -08 000000101 INF: Y Motor: Unshifted Position: 1226185
17-02-28 20:10:14.555 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:10:14.555 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:10:14.555 -08 000000039 INF: ===================Camera #2 Frame #269===================
17-02-28 20:10:14.576 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:14.651 -08 000000045 INF: FPGA: Recv TDIYWAIT
17-02-28 20:10:14.651 -08 000000089 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:14.653 -08 000000089 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:10:14.654 -08 000000086 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:10:14.654 -08 000000053 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:10:14.654 -08 000000086 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:10:14.654 -08 000000086 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:10:14.654 -08 000000086 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:10:14.654 -08 000000086 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:10:14.654 -08 000000053 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:10:14.654 -08 000000053 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:10:14.654 -08 000000053 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:10:14.655 -08 000000053 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:10:14.687 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:10:14.687 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:10:14.687 -08 000000032 INF: ===================Camera #0 Frame #272===================
17-02-28 20:10:14.700 -08 000000032 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:10:14.701 -08 000000032 INF: ===================CameraTDI Cleanup===================
17-02-28 20:10:14.703 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:14.839 -08 000000101 INF: Y Motor: Unshifted Position: 1024478
17-02-28 20:10:14.862 -08 000000032 INF: Camera #0 ReleaseBuffer
17-02-28 20:10:14.862 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:10:14.862 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:10:14.862 -08 000000039 INF: ===================Camera #2 Frame #272===================
17-02-28 20:10:14.862 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:10:14.871 -08 000000039 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:10:14.872 -08 000000039 INF: ===================CameraTDI Cleanup===================
17-02-28 20:10:14.889 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:14.894 -08 000000032 INF: ======================================
17-02-28 20:10:15.023 -08 000000076 INF: FPGA: Recv EX2MV
17-02-28 20:10:15.023 -08 000000076 INF: FPGA: Recv EX1MV
17-02-28 20:10:15.023 -08 000000053 INF: Excitation Filter 1: Moved 107 steps in 368.8794 ms
17-02-28 20:10:15.023 -08 000000086 INF: Excitation Filter 2: Moved 107 steps in 369.174 ms
17-02-28 20:10:15.023 -08 000000053 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.0227 ms
17-02-28 20:10:15.023 -08 000000086 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.2842 ms
17-02-28 20:10:15.023 -08 000000053 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.2303 ms
17-02-28 20:10:15.023 -08 000000086 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.3976 ms
17-02-28 20:10:15.023 -08 000000053 INF: ======================================
17-02-28 20:10:15.024 -08 000000086 INF: ======================================
17-02-28 20:10:15.025 -08 000000101 INF: Y Motor: Unshifted Position: 992823
17-02-28 20:10:15.025 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:10:15.025 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:15.025 -08 000000089 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:15.026 -08 000000089 INF: ======================================
17-02-28 20:10:15.071 -08 000000039 INF: Camera #2 ReleaseBuffer
17-02-28 20:10:15.071 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:10:15.091 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:10:15.091 -08 000000101 INF: Y Motor: Moved to 14.9282 after 7863 ms
17-02-28 20:10:15.091 -08 000000101 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:10:15.106 -08 000000039 INF: ======================================
17-02-28 20:10:15.107 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:10:15.108 -08 000000074 INF: ======================================
17-02-28 20:10:15.150 -08 000000101 INF: Y Motor: Recv v 4097\r
17-02-28 20:10:15.150 -08 000000101 INF: Y Motor: Status After move finished OK:
17-02-28 20:10:15.150 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:15.215 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:10:15.215 -08 000000101 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:15.215 -08 000000101 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:10:15.277 -08 000000101 INF: Y Motor: Recv v 134217728\r
17-02-28 20:10:15.277 -08 000000101 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:10:15.277 -08 000000101 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:10:15.277 -08 000000101 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:10:15.339 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:10:15.339 -08 000000101 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:10:15.339 -08 000000101 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:10:15.339 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:15.401 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:10:15.401 -08 000000101 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:10:15.401 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:15.463 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:10:15.463 -08 000000101 INF: ======================================
17-02-28 20:10:15.464 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:15.465 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:15.466 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:15.466 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:10:15.523 -08 000000052 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:10:15.523 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:10:15.585 -08 000000102 INF: FPGA: Recv TDIYERD 1492823
17-02-28 20:10:15.585 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:10:15.647 -08 000000085 INF: FPGA: Recv ZADCR 21407
17-02-28 20:10:15.647 -08 000000042 INF: At scan end Y pos = 14.928 and Z pos = -0.082. Y moved -48.539 mm
17-02-28 20:10:15.647 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:10:15.713 -08 000000098 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:10:15.713 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:10:15.713 -08 000000042 INF: TDIScan finished after 11842.0676 ms
17-02-28 20:10:15.713 -08 000000042 INF: Image[0]: Y should trigger at 63.467 mm, 2nd row was at 64.376 mm (error = 0.909 mm)
17-02-28 20:10:15.713 -08 000000042 INF: Image[2]: Y should trigger at 63.467 mm, 2nd row was at 64.376 mm (error = 0.909 mm)
17-02-28 20:10:15.715 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:15.745 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.479 um
17-02-28 20:10:15.745 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:15.746 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:10:15.772 -08 000000106 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:10:15.772 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:15.773 -08 000000086 INF: ===================Dither Clean Up Command===================
17-02-28 20:10:15.773 -08 000000101 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:10:15.773 -08 000000076 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:10:15.773 -08 000000053 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:10:15.774 -08 000000101 INF: ======================================
17-02-28 20:10:15.774 -08 000000053 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:10:15.774 -08 000000053 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:10:15.774 -08 000000076 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:10:15.774 -08 000000076 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:10:15.774 -08 000000111 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:10:15.774 -08 000000083 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:10:15.774 -08 000000083 INF: ======================================
17-02-28 20:10:15.775 -08 000000111 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:10:15.837 -08 000000046 INF: FPGA: Recv ZSTEP 
17-02-28 20:10:15.837 -08 000000046 INF: FPGA: Recv ZSEL 
17-02-28 20:10:15.837 -08 000000111 INF: FPGA: Xmit ZDACW 26649\n
17-02-28 20:10:15.837 -08 000000053 INF: ======================================
17-02-28 20:10:15.839 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:10:15.839 -08 000000076 INF: ======================================
17-02-28 20:10:15.899 -08 000000062 INF: FPGA: Recv ZDACW 
17-02-28 20:10:15.899 -08 000000111 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:10:15.899 -08 000000111 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:10:15.961 -08 000000087 INF: FPGA: Recv TDIBB
17-02-28 20:10:15.961 -08 000000111 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:10:15.962 -08 000000111 INF: ======================================
17-02-28 20:10:15.963 -08 000000086 INF: ======================================
17-02-28 20:10:15.964 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:15.965 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:10:15.965 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:15.965 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:10:15.965 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:15.966 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:10:15.966 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:15.966 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:10:15.966 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:15.966 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827===================
17-02-28 20:10:15.966 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827===================
17-02-28 20:10:15.967 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:10:15.967 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:10:15.967 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:10:15.967 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827===================
17-02-28 20:10:15.990 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:10:15.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:10:15.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827===================
17-02-28 20:10:15.991 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:15.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827===================
17-02-28 20:10:15.991 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:10:15.991 -08 000000042 INF: Transformed XStagePosition from 80.79618 mm to 80.7737557254732 mm.
17-02-28 20:10:16.016 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5762078015842 mm.
17-02-28 20:10:16.016 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3762078015842 mm.
17-02-28 20:10:16.016 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4669578015842 mm.
17-02-28 20:10:16.019 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:16.019 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:10:16.020 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:16.020 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -101.7 um, section = E_1
17-02-28 20:10:16.022 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:16.023 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:16.029 -08 000000053 INF: ===================Move X,Y===================
17-02-28 20:10:16.029 -08 000000053 INF: ===================Move X,Y, Parallel===================
17-02-28 20:10:16.030 -08 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:10:16.030 -08 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:10:16.031 -08 000000074 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:10:16.031 -08 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:10:16.032 -08 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:10:16.034 -08 000000083 INF: ===================TDI Scan Setup===================
17-02-28 20:10:16.035 -08 000000051 INF: ===================Camera Arm TDI===================
17-02-28 20:10:16.035 -08 000000083 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:16.035 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2104 Request: {"Cycle":2,"Lane":5,"Tile":2104,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF250","HCSMMF183","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.036 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:10:16.036 -08 000000083 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:10:16.036 -08 000000083 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:10:16.036 -08 000000083 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:10:16.036 -08 000000051 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:10:16.038 -08 000000076 INF: ===================MoveEmissionFilters===================
17-02-28 20:10:16.042 -08 000000100 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:10:16.044 -08 000000100 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:10:16.046 -08 000000085 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:10:16.047 -08 000000085 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:10:16.047 -08 000000111 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:10:16.048 -08 000000052 INF: ===================Move X Motor without settling===================
17-02-28 20:10:16.048 -08 000000052 INF: X Motor: Xmit PR VM\n
17-02-28 20:10:16.048 -08 000000111 INF: ======================================
17-02-28 20:10:16.049 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:10:16.050 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:10:16.051 -08 000000090 INF: ===================Move Y Motor without settling===================
17-02-28 20:10:16.052 -08 000000090 INF: Y Motor: Moving to 64.5762 mm @25.000 mm/sec, started at 14.9282 mm
17-02-28 20:10:16.052 -08 000000111 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:10:16.052 -08 000000090 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:10:16.052 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:16.053 -08 000000111 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:10:16.053 -08 000000111 INF: ======================================
17-02-28 20:10:16.054 -08 000000055 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:10:16.055 -08 000000055 INF: ======================================
17-02-28 20:10:16.058 -08 000000111 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:10:16.058 -08 000000100 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:10:16.058 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:10:16.058 -08 000000046 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:10:16.059 -08 000000111 INF: ======================================
17-02-28 20:10:16.059 -08 000000046 INF: ======================================
17-02-28 20:10:16.060 -08 000000064 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:10:16.060 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:10:16.061 -08 000000064 INF: ======================================
17-02-28 20:10:16.061 -08 000000046 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:10:16.061 -08 000000100 INF: ======================================
17-02-28 20:10:16.062 -08 000000046 INF: ======================================
17-02-28 20:10:16.063 -08 000000046 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:10:16.064 -08 000000046 INF: ======================================
17-02-28 20:10:16.065 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:10:16.065 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:10:16.067 -08 000000101 INF: ======================================
17-02-28 20:10:16.068 -08 000000055 INF: ======================================
17-02-28 20:10:16.069 -08 000000085 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:10:16.070 -08 000000085 INF: ======================================
17-02-28 20:10:16.072 -08 000000076 INF: ======================================
17-02-28 20:10:16.095 -08 000000064 INF: FPGA: Recv ZSEL 
17-02-28 20:10:16.097 -08 000000083 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:10:16.097 -08 000000052 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:10:16.097 -08 000000052 INF: X Motor: Xmit PR VI\n
17-02-28 20:10:16.097 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:10:16.097 -08 000000090 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:10:16.097 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:16.097 -08 000000083 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:10:16.151 -08 000000085 INF: FPGA: Recv TDIBB
17-02-28 20:10:16.152 -08 000000083 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:10:16.153 -08 000000052 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:10:16.153 -08 000000052 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:10:16.153 -08 000000052 INF: X Motor: Moving to 80.7738 mm @15.000 mm/sec, started at 79.6738 mm
17-02-28 20:10:16.153 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:10:16.153 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:16.153 -08 000000052 INF: X Motor: Xmit MA 8919\n
17-02-28 20:10:16.153 -08 000000083 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:10:16.153 -08 000000083 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:16.155 -08 000000083 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:10:16.155 -08 000000083 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:10:16.155 -08 000000083 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:10:16.158 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2103 Request: {"Cycle":2,"Lane":5,"Tile":2103,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF229","HCSMMF282","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.211 -08 000000076 INF: FPGA: Recv ZSTEP 
17-02-28 20:10:16.211 -08 000000083 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:16.213 -08 000000052 INF: X Motor: Recv MA 8919\r\n>
17-02-28 20:10:16.213 -08 000000052 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:10:16.213 -08 000000083 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:10:16.213 -08 000000083 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:16.214 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:10:16.214 -08 000000090 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:16.214 -08 000000090 INF: Y Motor: Set target position to 5957621 encoder counts
17-02-28 20:10:16.214 -08 000000090 INF: Y Motor: Xmit s r0xca 5957621\r
17-02-28 20:10:16.215 -08 000000083 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:10:16.215 -08 000000083 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:10:16.215 -08 000000083 INF: Z Motor: Arming to move to -0.0617 mm
17-02-28 20:10:16.215 -08 000000083 INF: FPGA: Xmit ZYT 6437621 4\n
17-02-28 20:10:16.275 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:10:16.275 -08 000000090 INF: Y Motor: Start the move command
17-02-28 20:10:16.275 -08 000000090 INF: Y Motor: Xmit t 1\r
17-02-28 20:10:16.275 -08 000000110 INF: FPGA: Recv ZYT 
17-02-28 20:10:16.275 -08 000000083 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492823 enc / 14.928 mm / ) = 6437621 enc / 64.376 mm
17-02-28 20:10:16.276 -08 000000083 INF: FPGA: Xmit ZARM 16164\n
17-02-28 20:10:16.335 -08 000000085 INF: FPGA: Recv ZARM
17-02-28 20:10:16.335 -08 000000083 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.2302 ms
17-02-28 20:10:16.335 -08 000000083 INF: Z Motor: ArmAbsStepped took 119.8968 ms
17-02-28 20:10:16.335 -08 000000083 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:16.337 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:10:16.337 -08 000000083 INF: ===================TDI Scan Setup===================
17-02-28 20:10:16.337 -08 000000090 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:10:16.337 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:16.338 -08 000000083 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:10:16.339 -08 000000083 INF: ===================TDI Scan Setup===================
17-02-28 20:10:16.340 -08 000000083 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:10:16.340 -08 000000083 INF: ===================TDI Scan Setup===================
17-02-28 20:10:16.342 -08 000000083 INF: ======================================
17-02-28 20:10:16.464 -08 000000090 INF: Y Motor: Unshifted Position: 1074931
17-02-28 20:10:16.514 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:16.617 -08 000000051 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:10:16.617 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:10:16.617 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:10:16.618 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2105 Request: {"Cycle":2,"Lane":5,"Tile":2105,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF194","HCSMMF261","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.619 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2101 Request: {"Cycle":2,"Lane":5,"Tile":2101,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF200","HCSMMF206","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.619 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2109 Request: {"Cycle":2,"Lane":5,"Tile":2109,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF251","HCSMMF267","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.620 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2102 Request: {"Cycle":2,"Lane":5,"Tile":2102,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF270","HCSMMF236","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.621 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2111 Request: {"Cycle":2,"Lane":5,"Tile":2111,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF220","HCSMMF268","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.622 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2110 Request: {"Cycle":2,"Lane":5,"Tile":2110,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF263","HCSMMF189","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.623 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2106 Request: {"Cycle":2,"Lane":5,"Tile":2106,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF259","HCSMMF199","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.623 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2112 Request: {"Cycle":2,"Lane":5,"Tile":2112,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF262","HCSMMF277","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.624 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2116 Request: {"Cycle":2,"Lane":5,"Tile":2116,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF265","HCSMMF234","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.625 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2108 Request: {"Cycle":2,"Lane":5,"Tile":2108,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF184","HCSMMF198","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.625 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2107 Request: {"Cycle":2,"Lane":5,"Tile":2107,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF243","HCSMMF241","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.626 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2113 Request: {"Cycle":2,"Lane":5,"Tile":2113,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF188","HCSMMF264","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.627 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2117 Request: {"Cycle":2,"Lane":5,"Tile":2117,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF283","HCSMMF218","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.627 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2115 Request: {"Cycle":2,"Lane":5,"Tile":2115,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF284","HCSMMF230","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.628 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2119 Request: {"Cycle":2,"Lane":5,"Tile":2119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF196","HCSMMF246","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.629 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2114 Request: {"Cycle":2,"Lane":5,"Tile":2114,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF177","HCSMMF192","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.629 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2118 Request: {"Cycle":2,"Lane":5,"Tile":2118,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF219","HCSMMF249","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.630 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2122 Request: {"Cycle":2,"Lane":5,"Tile":2122,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF238","HCSMMF245","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.631 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2123 Request: {"Cycle":2,"Lane":5,"Tile":2123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF211","HCSMMF213","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.632 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2124 Request: {"Cycle":2,"Lane":5,"Tile":2124,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF255","HCSMMF186","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.632 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:10:16.634 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2121 Request: {"Cycle":2,"Lane":5,"Tile":2121,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF258","HCSMMF240","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.634 -08 000000051 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:10:16.634 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2126 Request: {"Cycle":2,"Lane":5,"Tile":2126,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF254","HCSMMF193","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.635 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2125 Request: {"Cycle":2,"Lane":5,"Tile":2125,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF273","HCSMMF181","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.636 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2120 Request: {"Cycle":2,"Lane":5,"Tile":2120,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF215","HCSMMF195","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.637 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2127 Request: {"Cycle":2,"Lane":5,"Tile":2127,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF257","HCSMMF256","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.637 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2128 Request: {"Cycle":2,"Lane":5,"Tile":2128,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF227","HCSMMF237","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:16.638 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:16.639 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:16.645 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:10:16.738 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:16.738 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:10:16.774 -08 000000090 INF: Y Motor: Unshifted Position: 1782813
17-02-28 20:10:16.774 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:16.779 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:10:16.824 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:16.839 -08 000000052 INF: X Motor: Xmit PR ER\n
17-02-28 20:10:16.865 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:16.870 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:10:16.899 -08 000000052 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:10:16.899 -08 000000052 INF: X Motor: Moved to 80.7749 after 686 ms
17-02-28 20:10:16.899 -08 000000052 INF: ======================================
17-02-28 20:10:16.949 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:16.959 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:16.965 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:10:17.055 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:17.087 -08 000000090 INF: Y Motor: Unshifted Position: 2560346
17-02-28 20:10:17.137 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:17.235 -08 000000051 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:10:17.235 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:10:17.235 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:10:17.250 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:10:17.252 -08 000000051 INF: ===================Camera Arm TDI===================
17-02-28 20:10:17.253 -08 000000051 INF: ======================================
17-02-28 20:10:17.254 -08 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:10:17.255 -08 000000074 INF: ======================================
17-02-28 20:10:17.261 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:17.368 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:10:17.397 -08 000000090 INF: Y Motor: Unshifted Position: 3341115
17-02-28 20:10:17.447 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:17.573 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:17.709 -08 000000090 INF: Y Motor: Unshifted Position: 4126190
17-02-28 20:10:17.759 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:17.886 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:18.023 -08 000000090 INF: Y Motor: Unshifted Position: 4904463
17-02-28 20:10:18.073 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:18.196 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:18.333 -08 000000090 INF: Y Motor: Unshifted Position: 5685366
17-02-28 20:10:18.383 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:18.510 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:18.663 -08 000000090 INF: Y Motor: Unshifted Position: 5957624
17-02-28 20:10:18.663 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:10:18.663 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:18.725 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:10:18.725 -08 000000090 INF: Y Motor: Moved to 64.5762 after 2388 ms
17-02-28 20:10:18.725 -08 000000090 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:10:18.787 -08 000000090 INF: Y Motor: Recv v 4096\r
17-02-28 20:10:18.787 -08 000000090 INF: Y Motor: Status After move finished OK:
17-02-28 20:10:18.787 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:18.848 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:10:18.848 -08 000000090 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:18.848 -08 000000090 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:10:18.913 -08 000000090 INF: Y Motor: Recv v 402653184\r
17-02-28 20:10:18.913 -08 000000090 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:10:18.913 -08 000000090 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:10:18.913 -08 000000090 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:10:18.974 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:10:18.974 -08 000000090 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:10:18.974 -08 000000090 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:10:18.974 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:19.036 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:10:19.036 -08 000000090 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:10:19.036 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:19.101 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:10:19.101 -08 000000090 INF: ======================================
17-02-28 20:10:19.102 -08 000000053 INF: ===================Move X,Y===================
17-02-28 20:10:19.103 -08 000000053 INF: ======================================
17-02-28 20:10:19.104 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:19.105 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:19.105 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:10:19.105 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:10:19.164 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:10:19.164 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:10:19.222 -08 000000054 INF: FPGA: Recv ZFREQCL
17-02-28 20:10:19.222 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:10:19.222 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:19.223 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:10:19.285 -08 000000062 INF: FPGA: Recv TDIYERD 6457622
17-02-28 20:10:19.286 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457622 counts (64.576 mm)
17-02-28 20:10:19.286 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:19.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:19.287 -08 000000057 INF: ===================Set YMotor gains for scans===================
17-02-28 20:10:19.287 -08 000000044 INF: ===================TDI FPGA Arm===================
17-02-28 20:10:19.288 -08 000000057 INF: ======================================
17-02-28 20:10:19.288 -08 000000044 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:10:19.289 -08 000000044 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:10:19.289 -08 000000044 INF: FPGA: Xmit TDIYPOS 6346696\n
17-02-28 20:10:19.345 -08 000000102 INF: FPGA: Recv TDIYPOS
17-02-28 20:10:19.346 -08 000000044 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:10:19.347 -08 000000044 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:10:19.347 -08 000000044 INF: FPGA: Xmit TDIYARM3 139264 6437621 1 1\n
17-02-28 20:10:19.410 -08 000000100 INF: FPGA: Recv TDIYARM3
17-02-28 20:10:19.410 -08 000000044 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:10:19.412 -08 000000044 INF: ===================TDI FPGA Arm===================
17-02-28 20:10:19.414 -08 000000044 INF: ======================================
17-02-28 20:10:19.415 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:19.416 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:19.416 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:19.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:19.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:19.418 -08 000000091 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:10:19.418 -08 000000091 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:10:19.418 -08 000000091 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:10:19.418 -08 000000091 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:10:19.418 -08 000000091 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:10:19.419 -08 000000058 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:10:19.419 -08 000000058 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:10:19.419 -08 000000058 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:10:19.419 -08 000000058 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:10:19.420 -08 000000058 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:10:19.782 -08 000000095 INF: FPGA: Recv EX2MV
17-02-28 20:10:19.782 -08 000000095 INF: FPGA: Recv EX1MV
17-02-28 20:10:19.782 -08 000000058 INF: Excitation Filter 1: Moved -107 steps in 362.8404 ms
17-02-28 20:10:19.782 -08 000000091 INF: Excitation Filter 2: Moved -107 steps in 363.746 ms
17-02-28 20:10:19.782 -08 000000058 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 362.9571 ms
17-02-28 20:10:19.782 -08 000000058 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 363.1092 ms
17-02-28 20:10:19.782 -08 000000091 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 363.8517 ms
17-02-28 20:10:19.782 -08 000000091 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 364.03 ms
17-02-28 20:10:19.783 -08 000000058 INF: ======================================
17-02-28 20:10:19.783 -08 000000091 INF: ======================================
17-02-28 20:10:19.784 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:19.785 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:19.786 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:10:19.786 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:19.786 -08 000000086 INF: ===================FPGA Z Wait===================
17-02-28 20:10:19.786 -08 000000055 INF: ===================Move Y Motor without settling===================
17-02-28 20:10:19.786 -08 000000086 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:10:19.786 -08 000000055 INF: Y Motor: Moving to 14.9279 mm @6.500 mm/sec, started at 64.5762 mm
17-02-28 20:10:19.786 -08 000000055 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:10:19.786 -08 000000055 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:19.786 -08 000000081 INF: ===================Camera TDI, Parallel===================
17-02-28 20:10:19.787 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:10:19.787 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:10:19.787 -08 000000039 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:10:19.788 -08 000000039 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:10:19.789 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:19.789 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:19.790 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:19.790 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:19.849 -08 000000055 INF: Y Motor: Recv ok\r
17-02-28 20:10:19.849 -08 000000055 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:10:19.849 -08 000000055 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:19.910 -08 000000055 INF: Y Motor: Recv ok\r
17-02-28 20:10:19.910 -08 000000055 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:19.940 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:19.940 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:19.940 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:19.940 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:19.972 -08 000000055 INF: Y Motor: Recv v 0\r
17-02-28 20:10:19.972 -08 000000055 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:19.972 -08 000000055 INF: Y Motor: Set target position to 992787 encoder counts
17-02-28 20:10:19.972 -08 000000055 INF: Y Motor: Xmit s r0xca 992787\r
17-02-28 20:10:20.036 -08 000000055 INF: Y Motor: Recv ok\r
17-02-28 20:10:20.036 -08 000000055 INF: Y Motor: Start the move command
17-02-28 20:10:20.036 -08 000000055 INF: Y Motor: Xmit t 1\r
17-02-28 20:10:20.090 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:20.090 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:20.090 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:20.090 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:20.100 -08 000000055 INF: Y Motor: Recv ok\r
17-02-28 20:10:20.100 -08 000000055 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:10:20.100 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:20.158 -08 000000100 INF: FPGA: Recv ZWAIT 
17-02-28 20:10:20.158 -08 000000086 INF: ======================================
17-02-28 20:10:20.224 -08 000000055 INF: Y Motor: Unshifted Position: 5895985
17-02-28 20:10:20.240 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:10:20.240 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:10:20.240 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:10:20.240 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:10:20.240 -08 000000062 INF: ===================Camera #0 Frame #4===================
17-02-28 20:10:20.240 -08 000000106 INF: ===================Camera #2 Frame #4===================
17-02-28 20:10:20.274 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:20.398 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:20.403 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:10:20.403 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:10:20.403 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:10:20.403 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:10:20.403 -08 000000062 INF: ===================Camera #0 Frame #10===================
17-02-28 20:10:20.403 -08 000000106 INF: ===================Camera #2 Frame #10===================
17-02-28 20:10:20.535 -08 000000055 INF: Y Motor: Unshifted Position: 5693831
17-02-28 20:10:20.571 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:10:20.571 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:10:20.571 -08 000000062 INF: ===================Camera #0 Frame #17===================
17-02-28 20:10:20.572 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:10:20.572 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:10:20.572 -08 000000106 INF: ===================Camera #2 Frame #17===================
17-02-28 20:10:20.585 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:20.708 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:20.742 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:10:20.742 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:10:20.742 -08 000000062 INF: ===================Camera #0 Frame #23===================
17-02-28 20:10:20.747 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:10:20.747 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:10:20.747 -08 000000106 INF: ===================Camera #2 Frame #23===================
17-02-28 20:10:20.846 -08 000000055 INF: Y Motor: Unshifted Position: 5489740
17-02-28 20:10:20.896 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:20.910 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:10:20.910 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:10:20.910 -08 000000062 INF: ===================Camera #0 Frame #29===================
17-02-28 20:10:20.918 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:10:20.918 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:10:20.918 -08 000000106 INF: ===================Camera #2 Frame #29===================
17-02-28 20:10:21.022 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:21.078 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:10:21.078 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:10:21.078 -08 000000062 INF: ===================Camera #0 Frame #35===================
17-02-28 20:10:21.088 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:10:21.088 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:10:21.088 -08 000000106 INF: ===================Camera #2 Frame #36===================
17-02-28 20:10:21.157 -08 000000055 INF: Y Motor: Unshifted Position: 5287373
17-02-28 20:10:21.207 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:21.248 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:10:21.248 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:10:21.248 -08 000000062 INF: ===================Camera #0 Frame #42===================
17-02-28 20:10:21.265 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:10:21.265 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:10:21.265 -08 000000106 INF: ===================Camera #2 Frame #42===================
17-02-28 20:10:21.333 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:21.421 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:10:21.421 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:10:21.421 -08 000000062 INF: ===================Camera #0 Frame #48===================
17-02-28 20:10:21.439 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:10:21.439 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:10:21.439 -08 000000106 INF: ===================Camera #2 Frame #49===================
17-02-28 20:10:21.472 -08 000000055 INF: Y Motor: Unshifted Position: 5085000
17-02-28 20:10:21.522 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:21.591 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:10:21.591 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:10:21.591 -08 000000062 INF: ===================Camera #0 Frame #54===================
17-02-28 20:10:21.617 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:10:21.617 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:10:21.617 -08 000000106 INF: ===================Camera #2 Frame #55===================
17-02-28 20:10:21.645 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:21.761 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:10:21.761 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:10:21.761 -08 000000062 INF: ===================Camera #0 Frame #60===================
17-02-28 20:10:21.783 -08 000000055 INF: Y Motor: Unshifted Position: 4882206
17-02-28 20:10:21.791 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:10:21.791 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:10:21.791 -08 000000106 INF: ===================Camera #2 Frame #62===================
17-02-28 20:10:21.833 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:21.931 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:10:21.931 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:10:21.931 -08 000000062 INF: ===================Camera #0 Frame #67===================
17-02-28 20:10:21.956 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:21.969 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:10:21.969 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:10:21.969 -08 000000106 INF: ===================Camera #2 Frame #68===================
17-02-28 20:10:22.096 -08 000000055 INF: Y Motor: Unshifted Position: 4677885
17-02-28 20:10:22.104 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:10:22.104 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:10:22.104 -08 000000062 INF: ===================Camera #0 Frame #73===================
17-02-28 20:10:22.142 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:10:22.142 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:10:22.142 -08 000000106 INF: ===================Camera #2 Frame #75===================
17-02-28 20:10:22.146 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:22.271 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:22.274 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:10:22.274 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:10:22.274 -08 000000062 INF: ===================Camera #0 Frame #79===================
17-02-28 20:10:22.319 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:10:22.319 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:10:22.319 -08 000000106 INF: ===================Camera #2 Frame #81===================
17-02-28 20:10:22.407 -08 000000055 INF: Y Motor: Unshifted Position: 4475503
17-02-28 20:10:22.444 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:10:22.444 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:10:22.444 -08 000000062 INF: ===================Camera #0 Frame #86===================
17-02-28 20:10:22.457 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:22.492 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:10:22.492 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:10:22.492 -08 000000106 INF: ===================Camera #2 Frame #87===================
17-02-28 20:10:22.582 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:22.617 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:10:22.617 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:10:22.617 -08 000000062 INF: ===================Camera #0 Frame #92===================
17-02-28 20:10:22.664 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:10:22.664 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:10:22.664 -08 000000106 INF: ===================Camera #2 Frame #94===================
17-02-28 20:10:22.719 -08 000000055 INF: Y Motor: Unshifted Position: 4273359
17-02-28 20:10:22.769 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:22.787 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:10:22.787 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:10:22.787 -08 000000062 INF: ===================Camera #0 Frame #98===================
17-02-28 20:10:22.840 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:10:22.840 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:10:22.840 -08 000000106 INF: ===================Camera #2 Frame #100===================
17-02-28 20:10:22.892 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:22.957 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:10:22.957 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:10:22.957 -08 000000062 INF: ===================Camera #0 Frame #105===================
17-02-28 20:10:23.013 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:10:23.013 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:10:23.013 -08 000000106 INF: ===================Camera #2 Frame #107===================
17-02-28 20:10:23.030 -08 000000055 INF: Y Motor: Unshifted Position: 4069253
17-02-28 20:10:23.080 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:23.130 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:10:23.130 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:10:23.130 -08 000000062 INF: ===================Camera #0 Frame #111===================
17-02-28 20:10:23.190 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:10:23.190 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:10:23.190 -08 000000106 INF: ===================Camera #2 Frame #113===================
17-02-28 20:10:23.206 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:23.300 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:10:23.300 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:10:23.300 -08 000000062 INF: ===================Camera #0 Frame #117===================
17-02-28 20:10:23.342 -08 000000055 INF: Y Motor: Unshifted Position: 3866890
17-02-28 20:10:23.361 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:10:23.361 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:10:23.361 -08 000000106 INF: ===================Camera #2 Frame #119===================
17-02-28 20:10:23.392 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:23.470 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:10:23.470 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:10:23.470 -08 000000062 INF: ===================Camera #0 Frame #123===================
17-02-28 20:10:23.517 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:23.531 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:10:23.531 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:10:23.531 -08 000000106 INF: ===================Camera #2 Frame #126===================
17-02-28 20:10:23.642 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:10:23.642 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:10:23.643 -08 000000062 INF: ===================Camera #0 Frame #130===================
17-02-28 20:10:23.653 -08 000000055 INF: Y Motor: Unshifted Position: 3663868
17-02-28 20:10:23.703 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:23.706 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:10:23.706 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:10:23.706 -08 000000106 INF: ===================Camera #2 Frame #132===================
17-02-28 20:10:23.814 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:10:23.814 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:10:23.814 -08 000000062 INF: ===================Camera #0 Frame #136===================
17-02-28 20:10:23.829 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:23.877 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:10:23.877 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:10:23.877 -08 000000106 INF: ===================Camera #2 Frame #138===================
17-02-28 20:10:23.967 -08 000000055 INF: Y Motor: Unshifted Position: 3461723
17-02-28 20:10:23.983 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:10:23.983 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:10:23.983 -08 000000062 INF: ===================Camera #0 Frame #142===================
17-02-28 20:10:24.017 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:24.050 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:10:24.050 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:10:24.050 -08 000000106 INF: ===================Camera #2 Frame #145===================
17-02-28 20:10:24.140 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:24.153 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:10:24.153 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:10:24.153 -08 000000062 INF: ===================Camera #0 Frame #149===================
17-02-28 20:10:24.227 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:10:24.227 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:10:24.227 -08 000000106 INF: ===================Camera #2 Frame #151===================
17-02-28 20:10:24.278 -08 000000055 INF: Y Motor: Unshifted Position: 3257410
17-02-28 20:10:24.326 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:10:24.326 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:10:24.326 -08 000000062 INF: ===================Camera #0 Frame #155===================
17-02-28 20:10:24.328 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:24.400 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:10:24.400 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:10:24.400 -08 000000106 INF: ===================Camera #2 Frame #158===================
17-02-28 20:10:24.454 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:24.496 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:10:24.496 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:10:24.496 -08 000000062 INF: ===================Camera #0 Frame #161===================
17-02-28 20:10:24.577 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:10:24.577 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:10:24.577 -08 000000106 INF: ===================Camera #2 Frame #164===================
17-02-28 20:10:24.590 -08 000000055 INF: Y Motor: Unshifted Position: 3056565
17-02-28 20:10:24.640 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:24.666 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:10:24.666 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:10:24.666 -08 000000062 INF: ===================Camera #0 Frame #167===================
17-02-28 20:10:24.750 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:10:24.750 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:10:24.750 -08 000000106 INF: ===================Camera #2 Frame #171===================
17-02-28 20:10:24.766 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:24.836 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:10:24.836 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:10:24.836 -08 000000062 INF: ===================Camera #0 Frame #174===================
17-02-28 20:10:24.901 -08 000000055 INF: Y Motor: Unshifted Position: 2852471
17-02-28 20:10:24.927 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:10:24.927 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:10:24.927 -08 000000106 INF: ===================Camera #2 Frame #177===================
17-02-28 20:10:24.951 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:25.009 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:10:25.009 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:10:25.009 -08 000000062 INF: ===================Camera #0 Frame #180===================
17-02-28 20:10:25.077 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:25.100 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:10:25.100 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:10:25.100 -08 000000106 INF: ===================Camera #2 Frame #183===================
17-02-28 20:10:25.179 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:10:25.179 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:10:25.179 -08 000000062 INF: ===================Camera #0 Frame #186===================
17-02-28 20:10:25.215 -08 000000055 INF: Y Motor: Unshifted Position: 2650755
17-02-28 20:10:25.265 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:25.273 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:10:25.273 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:10:25.273 -08 000000106 INF: ===================Camera #2 Frame #190===================
17-02-28 20:10:25.349 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:10:25.349 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:10:25.349 -08 000000062 INF: ===================Camera #0 Frame #193===================
17-02-28 20:10:25.389 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:25.450 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:10:25.450 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:10:25.450 -08 000000106 INF: ===================Camera #2 Frame #196===================
17-02-28 20:10:25.522 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:10:25.522 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:10:25.522 -08 000000062 INF: ===================Camera #0 Frame #199===================
17-02-28 20:10:25.526 -08 000000055 INF: Y Motor: Unshifted Position: 2446437
17-02-28 20:10:25.576 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:25.624 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 202, frameCount = 203.
17-02-28 20:10:25.624 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 203
17-02-28 20:10:25.624 -08 000000106 INF: ===================Camera #2 Frame #203===================
17-02-28 20:10:25.691 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:10:25.691 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:10:25.691 -08 000000062 INF: ===================Camera #0 Frame #205===================
17-02-28 20:10:25.702 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:25.801 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209.
17-02-28 20:10:25.801 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209
17-02-28 20:10:25.801 -08 000000106 INF: ===================Camera #2 Frame #209===================
17-02-28 20:10:25.839 -08 000000055 INF: Y Motor: Unshifted Position: 2244938
17-02-28 20:10:25.861 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:10:25.861 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:10:25.861 -08 000000062 INF: ===================Camera #0 Frame #211===================
17-02-28 20:10:25.889 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:25.974 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 215, frameCount = 216.
17-02-28 20:10:25.974 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 216
17-02-28 20:10:25.974 -08 000000106 INF: ===================Camera #2 Frame #216===================
17-02-28 20:10:26.012 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:26.031 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:10:26.031 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:10:26.031 -08 000000062 INF: ===================Camera #0 Frame #218===================
17-02-28 20:10:26.150 -08 000000055 INF: Y Motor: Unshifted Position: 2040622
17-02-28 20:10:26.151 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 221, frameCount = 222.
17-02-28 20:10:26.151 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 222
17-02-28 20:10:26.151 -08 000000106 INF: ===================Camera #2 Frame #222===================
17-02-28 20:10:26.201 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:26.205 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:10:26.205 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:10:26.205 -08 000000062 INF: ===================Camera #0 Frame #224===================
17-02-28 20:10:26.261 -08 000000066 INF: RunCopyService queue size at 2/28/2017 8:10:26 PM is 2
17-02-28 20:10:26.324 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:26.324 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-02-28 20:10:26.324 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-02-28 20:10:26.324 -08 000000106 INF: ===================Camera #2 Frame #228===================
17-02-28 20:10:26.375 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:10:26.375 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:10:26.375 -08 000000062 INF: ===================Camera #0 Frame #230===================
17-02-28 20:10:26.462 -08 000000055 INF: Y Motor: Unshifted Position: 1838473
17-02-28 20:10:26.496 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 234, frameCount = 235.
17-02-28 20:10:26.496 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 235
17-02-28 20:10:26.496 -08 000000106 INF: ===================Camera #2 Frame #235===================
17-02-28 20:10:26.512 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:26.545 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:10:26.545 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:10:26.545 -08 000000062 INF: ===================Camera #0 Frame #237===================
17-02-28 20:10:26.638 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:26.673 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 240, frameCount = 241.
17-02-28 20:10:26.673 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 241
17-02-28 20:10:26.673 -08 000000106 INF: ===================Camera #2 Frame #241===================
17-02-28 20:10:26.718 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:10:26.718 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:10:26.718 -08 000000062 INF: ===================Camera #0 Frame #243===================
17-02-28 20:10:26.776 -08 000000055 INF: Y Motor: Unshifted Position: 1636103
17-02-28 20:10:26.826 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:26.846 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:10:26.846 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:10:26.846 -08 000000106 INF: ===================Camera #2 Frame #248===================
17-02-28 20:10:26.888 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:10:26.888 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:10:26.888 -08 000000062 INF: ===================Camera #0 Frame #249===================
17-02-28 20:10:26.949 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:27.023 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 253, frameCount = 254.
17-02-28 20:10:27.023 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 254
17-02-28 20:10:27.023 -08 000000106 INF: ===================Camera #2 Frame #254===================
17-02-28 20:10:27.058 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:10:27.058 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:10:27.058 -08 000000062 INF: ===================Camera #0 Frame #255===================
17-02-28 20:10:27.087 -08 000000055 INF: Y Motor: Unshifted Position: 1431996
17-02-28 20:10:27.137 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:27.196 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:10:27.196 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:10:27.196 -08 000000106 INF: ===================Camera #2 Frame #261===================
17-02-28 20:10:27.228 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:10:27.228 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:10:27.228 -08 000000062 INF: ===================Camera #0 Frame #262===================
17-02-28 20:10:27.260 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:27.373 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:10:27.373 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:10:27.373 -08 000000106 INF: ===================Camera #2 Frame #267===================
17-02-28 20:10:27.398 -08 000000055 INF: Y Motor: Unshifted Position: 1229612
17-02-28 20:10:27.401 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:10:27.401 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:10:27.401 -08 000000062 INF: ===================Camera #0 Frame #268===================
17-02-28 20:10:27.448 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:27.522 -08 000000034 INF: FPGA: Recv TDIYWAIT
17-02-28 20:10:27.522 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:27.524 -08 000000039 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:10:27.525 -08 000000074 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:10:27.525 -08 000000046 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:10:27.525 -08 000000074 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:10:27.525 -08 000000074 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:10:27.525 -08 000000074 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:10:27.525 -08 000000046 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:10:27.525 -08 000000046 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:10:27.525 -08 000000046 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:10:27.525 -08 000000074 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:10:27.528 -08 000000046 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:10:27.546 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:10:27.546 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:10:27.546 -08 000000106 INF: ===================Camera #2 Frame #272===================
17-02-28 20:10:27.565 -08 000000106 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:10:27.566 -08 000000106 INF: ===================CameraTDI Cleanup===================
17-02-28 20:10:27.574 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:27.710 -08 000000055 INF: Y Motor: Unshifted Position: 1026827
17-02-28 20:10:27.747 -08 000000106 INF: Camera #2 ReleaseBuffer
17-02-28 20:10:27.747 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:10:27.747 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:10:27.747 -08 000000062 INF: ===================Camera #0 Frame #272===================
17-02-28 20:10:27.747 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:10:27.760 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:27.760 -08 000000062 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:10:27.761 -08 000000062 INF: ===================CameraTDI Cleanup===================
17-02-28 20:10:27.784 -08 000000106 INF: ======================================
17-02-28 20:10:27.894 -08 000000062 INF: Camera #0 ReleaseBuffer
17-02-28 20:10:27.894 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:10:27.896 -08 000000044 INF: FPGA: Recv EX1MV
17-02-28 20:10:27.896 -08 000000074 INF: Excitation Filter 1: Moved 107 steps in 370.7129 ms
17-02-28 20:10:27.896 -08 000000074 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.9197 ms
17-02-28 20:10:27.896 -08 000000074 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.9927 ms
17-02-28 20:10:27.897 -08 000000074 INF: ======================================
17-02-28 20:10:27.898 -08 000000055 INF: Y Motor: Unshifted Position: 992786
17-02-28 20:10:27.898 -08 000000055 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:10:27.898 -08 000000055 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:27.926 -08 000000062 INF: ======================================
17-02-28 20:10:27.928 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:10:27.929 -08 000000081 INF: ======================================
17-02-28 20:10:27.957 -08 000000100 INF: FPGA: Recv EX2MV
17-02-28 20:10:27.957 -08 000000046 INF: Excitation Filter 2: Moved 107 steps in 431.6368 ms
17-02-28 20:10:27.957 -08 000000046 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 431.7365 ms
17-02-28 20:10:27.957 -08 000000046 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 431.8143 ms
17-02-28 20:10:27.957 -08 000000046 INF: ======================================
17-02-28 20:10:27.959 -08 000000055 INF: Y Motor: Recv v 0\r
17-02-28 20:10:27.959 -08 000000055 INF: Y Motor: Moved to 14.9279 after 7858 ms
17-02-28 20:10:27.959 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:27.959 -08 000000055 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:10:27.960 -08 000000039 INF: ======================================
17-02-28 20:10:28.024 -08 000000055 INF: Y Motor: Recv v 4097\r
17-02-28 20:10:28.024 -08 000000055 INF: Y Motor: Status After move finished OK:
17-02-28 20:10:28.024 -08 000000055 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:28.086 -08 000000055 INF: Y Motor: Recv v 0\r
17-02-28 20:10:28.086 -08 000000055 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:28.086 -08 000000055 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:10:28.147 -08 000000055 INF: Y Motor: Recv v 134217728\r
17-02-28 20:10:28.147 -08 000000055 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:10:28.147 -08 000000055 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:10:28.147 -08 000000055 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:10:28.209 -08 000000055 INF: Y Motor: Recv v 0\r
17-02-28 20:10:28.209 -08 000000055 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:10:28.209 -08 000000055 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:10:28.209 -08 000000055 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:28.273 -08 000000055 INF: Y Motor: Recv ok\r
17-02-28 20:10:28.273 -08 000000055 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:10:28.273 -08 000000055 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:28.335 -08 000000055 INF: Y Motor: Recv ok\r
17-02-28 20:10:28.335 -08 000000055 INF: ======================================
17-02-28 20:10:28.336 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:28.337 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:28.338 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:28.338 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:10:28.397 -08 000000044 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:10:28.397 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:10:28.456 -08 000000101 INF: FPGA: Recv TDIYERD 1492788
17-02-28 20:10:28.456 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:10:28.521 -08 000000106 INF: FPGA: Recv ZADCR 21562
17-02-28 20:10:28.521 -08 000000042 INF: At scan end Y pos = 14.928 and Z pos = -0.083. Y moved -48.539 mm
17-02-28 20:10:28.521 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:10:28.581 -08 000000068 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:10:28.581 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:10:28.581 -08 000000042 INF: TDIScan finished after 12588.1189 ms
17-02-28 20:10:28.581 -08 000000042 INF: Image[0]: Y should trigger at 63.467 mm, 2nd row was at 64.376 mm (error = 0.909 mm)
17-02-28 20:10:28.581 -08 000000042 INF: Image[2]: Y should trigger at 63.467 mm, 2nd row was at 64.376 mm (error = 0.909 mm)
17-02-28 20:10:28.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:28.618 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.665 um
17-02-28 20:10:28.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:28.619 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:10:28.646 -08 000000110 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:10:28.646 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:28.647 -08 000000078 INF: ===================Dither Clean Up Command===================
17-02-28 20:10:28.647 -08 000000046 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:10:28.647 -08 000000062 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:10:28.647 -08 000000046 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:10:28.647 -08 000000046 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:10:28.648 -08 000000062 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:10:28.648 -08 000000062 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:10:28.648 -08 000000039 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:10:28.648 -08 000000074 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:10:28.648 -08 000000111 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:10:28.648 -08 000000074 INF: ======================================
17-02-28 20:10:28.649 -08 000000111 INF: ======================================
17-02-28 20:10:28.649 -08 000000039 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:10:28.708 -08 000000052 INF: FPGA: Recv ZSTEP 
17-02-28 20:10:28.708 -08 000000052 INF: FPGA: Recv ZSEL 
17-02-28 20:10:28.708 -08 000000039 INF: FPGA: Xmit ZDACW 26649\n
17-02-28 20:10:28.708 -08 000000062 INF: ======================================
17-02-28 20:10:28.710 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:10:28.710 -08 000000046 INF: ======================================
17-02-28 20:10:28.770 -08 000000081 INF: FPGA: Recv ZDACW 
17-02-28 20:10:28.770 -08 000000039 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:10:28.770 -08 000000039 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:10:28.831 -08 000000086 INF: FPGA: Recv TDIBB
17-02-28 20:10:28.831 -08 000000039 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:10:28.832 -08 000000039 INF: ======================================
17-02-28 20:10:28.833 -08 000000078 INF: ======================================
17-02-28 20:10:28.834 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:28.835 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:10:28.835 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:28.835 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:10:28.835 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:28.836 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:10:28.836 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:28.836 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:10:28.836 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:28.836 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827===================
17-02-28 20:10:28.836 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827===================
17-02-28 20:10:28.837 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:10:28.837 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:10:28.837 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:10:28.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827===================
17-02-28 20:10:28.860 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:10:28.861 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:10:28.861 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:10:28.861 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:28.862 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:10:28.862 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:10:28.862 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface===================
17-02-28 20:10:28.879 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:28.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:28.881 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:10:28.881 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:10:28.908 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2206 Request: {"Cycle":2,"Lane":5,"Tile":2206,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF196","HCSMMF245","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:28.958 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:10:28.959 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:28.960 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:10:28.960 -08 000000042 INF: Lane 6, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:10:28.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:28.963 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:28.969 -08 000000110 INF: ===================Move Tilt Motor 1===================
17-02-28 20:10:28.970 -08 000000110 INF: ======================================
17-02-28 20:10:28.974 -08 000000105 INF: ===================Move Tilt Motor 2===================
17-02-28 20:10:28.975 -08 000000105 INF: ======================================
17-02-28 20:10:28.978 -08 000000105 INF: ===================Move Tilt Motor 3===================
17-02-28 20:10:28.978 -08 000000105 INF: ======================================
17-02-28 20:10:28.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:28.986 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:29.102 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2202 Request: {"Cycle":2,"Lane":5,"Tile":2202,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF237","HCSMMF212","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.104 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:10:29.110 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2204 Request: {"Cycle":2,"Lane":5,"Tile":2204,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF191","HCSMMF256","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.117 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2203 Request: {"Cycle":2,"Lane":5,"Tile":2203,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF215","HCSMMF227","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.118 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:10:29.118 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:10:29.118 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:10:29.119 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2207 Request: {"Cycle":2,"Lane":5,"Tile":2207,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF273","HCSMMF266","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.119 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:10:29.121 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:10:29.121 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2201 Request: {"Cycle":2,"Lane":5,"Tile":2201,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF223","HCSMMF285","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.125 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2205 Request: {"Cycle":2,"Lane":5,"Tile":2205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF279","HCSMMF235","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.126 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:10:29.127 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2208 Request: {"Cycle":2,"Lane":5,"Tile":2208,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF213","HCSMMF199","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.127 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:10:29.127 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:10:29.128 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2211 Request: {"Cycle":2,"Lane":5,"Tile":2211,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF184","HCSMMF198","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.129 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2213 Request: {"Cycle":2,"Lane":5,"Tile":2213,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF216","HCSMMF217","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.130 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2212 Request: {"Cycle":2,"Lane":5,"Tile":2212,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF286","HCSMMF211","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.131 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2210 Request: {"Cycle":2,"Lane":5,"Tile":2210,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF264","HCSMMF253","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.132 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2214 Request: {"Cycle":2,"Lane":5,"Tile":2214,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF193","HCSMMF201","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.133 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2216 Request: {"Cycle":2,"Lane":5,"Tile":2216,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF221","HCSMMF197","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.134 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2220 Request: {"Cycle":2,"Lane":5,"Tile":2220,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF214","HCSMMF282","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.135 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2215 Request: {"Cycle":2,"Lane":5,"Tile":2215,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF287","HCSMMF268","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.137 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2209 Request: {"Cycle":2,"Lane":5,"Tile":2209,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF284","HCSMMF281","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.138 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2218 Request: {"Cycle":2,"Lane":5,"Tile":2218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF219","HCSMMF231","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.139 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2219 Request: {"Cycle":2,"Lane":5,"Tile":2219,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF190","HCSMMF249","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.143 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2217 Request: {"Cycle":2,"Lane":5,"Tile":2217,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF241","HCSMMF210","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.160 -08 000000069 INF: FPGA: Recv ZSTEP 
17-02-28 20:10:29.161 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:10:29.162 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:10:29.162 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1017 mm
17-02-28 20:10:29.162 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:10:29.163 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2223 Request: {"Cycle":2,"Lane":5,"Tile":2223,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF209","HCSMMF271","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.169 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2226 Request: {"Cycle":2,"Lane":5,"Tile":2226,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF179","HCSMMF203","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.171 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2224 Request: {"Cycle":2,"Lane":5,"Tile":2224,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF226","HCSMMF265","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.172 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2225 Request: {"Cycle":2,"Lane":5,"Tile":2225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF187","HCSMMF252","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.173 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2222 Request: {"Cycle":2,"Lane":5,"Tile":2222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF263","HCSMMF270","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.175 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2221 Request: {"Cycle":2,"Lane":5,"Tile":2221,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF251","HCSMMF269","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.177 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2227 Request: {"Cycle":2,"Lane":5,"Tile":2227,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF177","HCSMMF274","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.180 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 2228 Request: {"Cycle":2,"Lane":5,"Tile":2228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF194","HCSMMF250","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:29.182 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:29.188 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:10:29.222 -08 000000084 INF: FPGA: Recv ZTRG 
17-02-28 20:10:29.222 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:10:29.278 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:29.278 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:10:29.284 -08 000000098 INF: FPGA: Recv ZYT 
17-02-28 20:10:29.284 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:10:29.284 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:10:29.332 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:29.338 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:10:29.346 -08 000000076 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:10:29.346 -08 000000076 INF: FPGA: Recv ZMV 
17-02-28 20:10:29.346 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:10:29.346 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.1199 ms
17-02-28 20:10:29.346 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:10:29.408 -08 000000085 INF: FPGA: Recv ZDACR 60292
17-02-28 20:10:29.408 -08 000000042 INF: Z Motor: MoveAndTrigger took 246.3894 ms w/comms
17-02-28 20:10:29.408 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:10:29.408 -08 000000042 INF: Z Motor: MoveAbsStepped took 246.5594 ms
17-02-28 20:10:29.409 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:10:29.409 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:10:29.418 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:10:29.418 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:10:29.418 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:10:29.418 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:10:29.418 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:10:29.427 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:29.432 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:10:29.470 -08 000000084 INF: FPGA: Recv ZSTEP 
17-02-28 20:10:29.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:10:29.481 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:10:29.490 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:10:29.490 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:10:29.490 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:10:29.492 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:29.492 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:10:29.492 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:29.492 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = F_1
17-02-28 20:10:29.493 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:29.493 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:29.494 -08 000000102 INF: ===================MoveEmissionFilters===================
17-02-28 20:10:29.494 -08 000000098 INF: ===================Move X,Y===================
17-02-28 20:10:29.495 -08 000000098 INF: ===================Move X,Y, Parallel===================
17-02-28 20:10:29.495 -08 000000100 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:10:29.495 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:10:29.495 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:10:29.495 -08 000000104 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:10:29.496 -08 000000091 INF: ===================Move X Motor without settling===================
17-02-28 20:10:29.496 -08 000000100 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:10:29.496 -08 000000085 INF: ===================Move Y Motor without settling===================
17-02-28 20:10:29.496 -08 000000091 INF: X Motor: Xmit PR VM\n
17-02-28 20:10:29.496 -08 000000104 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:10:29.496 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:10:29.496 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:10:29.496 -08 000000085 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9279 mm
17-02-28 20:10:29.496 -08 000000085 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:10:29.497 -08 000000085 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:29.497 -08 000000074 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:10:29.497 -08 000000030 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:10:29.497 -08 000000044 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:10:29.497 -08 000000074 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:10:29.497 -08 000000101 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:10:29.497 -08 000000052 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:10:29.497 -08 000000039 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:10:29.498 -08 000000090 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:10:29.498 -08 000000045 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:10:29.498 -08 000000074 INF: ======================================
17-02-28 20:10:29.498 -08 000000101 INF: ======================================
17-02-28 20:10:29.498 -08 000000039 INF: ======================================
17-02-28 20:10:29.498 -08 000000090 INF: ======================================
17-02-28 20:10:29.499 -08 000000044 INF: ======================================
17-02-28 20:10:29.499 -08 000000052 INF: ======================================
17-02-28 20:10:29.499 -08 000000045 INF: ======================================
17-02-28 20:10:29.500 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:10:29.500 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:10:29.500 -08 000000104 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:10:29.501 -08 000000030 INF: ======================================
17-02-28 20:10:29.501 -08 000000051 INF: ======================================
17-02-28 20:10:29.501 -08 000000083 INF: ======================================
17-02-28 20:10:29.501 -08 000000104 INF: ======================================
17-02-28 20:10:29.502 -08 000000100 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:10:29.503 -08 000000100 INF: ======================================
17-02-28 20:10:29.504 -08 000000102 INF: ======================================
17-02-28 20:10:29.515 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:29.520 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:10:29.537 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:10:29.537 -08 000000085 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:10:29.537 -08 000000085 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:29.537 -08 000000091 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:10:29.537 -08 000000091 INF: X Motor: Xmit PR VI\n
17-02-28 20:10:29.597 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:10:29.597 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:29.599 -08 000000091 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:10:29.599 -08 000000091 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:10:29.599 -08 000000091 INF: X Motor: Moving to 83.0106 mm @15.000 mm/sec, started at 80.7749 mm
17-02-28 20:10:29.599 -08 000000091 INF: X Motor: Xmit MA 9835\n
17-02-28 20:10:29.609 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:29.659 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:10:29.659 -08 000000085 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:29.659 -08 000000085 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:10:29.659 -08 000000085 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:10:29.660 -08 000000091 INF: X Motor: Recv MA 9835\r\n>
17-02-28 20:10:29.660 -08 000000091 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:10:29.725 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:10:29.725 -08 000000085 INF: Y Motor: Start the move command
17-02-28 20:10:29.725 -08 000000085 INF: Y Motor: Xmit t 1\r
17-02-28 20:10:29.784 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:10:29.784 -08 000000085 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:10:29.784 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:29.887 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:10:29.911 -08 000000085 INF: Y Motor: Unshifted Position: 1074312
17-02-28 20:10:29.961 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:30.085 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:30.221 -08 000000085 INF: Y Motor: Unshifted Position: 1774452
17-02-28 20:10:30.271 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:30.283 -08 000000091 INF: X Motor: Xmit PR ER\n
17-02-28 20:10:30.349 -08 000000091 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:10:30.349 -08 000000091 INF: X Motor: Moved to 83.0112 after 689 ms
17-02-28 20:10:30.349 -08 000000091 INF: ======================================
17-02-28 20:10:30.399 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:30.535 -08 000000085 INF: Y Motor: Unshifted Position: 2560312
17-02-28 20:10:30.585 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:30.708 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:30.847 -08 000000085 INF: Y Motor: Unshifted Position: 3341076
17-02-28 20:10:30.897 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:31.021 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:31.157 -08 000000085 INF: Y Motor: Unshifted Position: 4121155
17-02-28 20:10:31.207 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:31.335 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:31.473 -08 000000085 INF: Y Motor: Unshifted Position: 4901094
17-02-28 20:10:31.523 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:31.645 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:31.783 -08 000000085 INF: Y Motor: Unshifted Position: 5680385
17-02-28 20:10:31.833 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:31.958 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:32.095 -08 000000085 INF: Y Motor: Unshifted Position: 5953354
17-02-28 20:10:32.095 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:10:32.095 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:32.157 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:10:32.157 -08 000000085 INF: Y Motor: Moved to 64.5335 after 2373 ms
17-02-28 20:10:32.157 -08 000000085 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:10:32.219 -08 000000085 INF: Y Motor: Recv v 4096\r
17-02-28 20:10:32.219 -08 000000085 INF: Y Motor: Status After move finished OK:
17-02-28 20:10:32.219 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:32.281 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:10:32.281 -08 000000085 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:32.281 -08 000000085 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:10:32.343 -08 000000085 INF: Y Motor: Recv v 402653184\r
17-02-28 20:10:32.343 -08 000000085 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:10:32.343 -08 000000085 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:10:32.343 -08 000000085 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:10:32.406 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:10:32.406 -08 000000085 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:10:32.406 -08 000000085 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:10:32.406 -08 000000085 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:32.469 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:10:32.469 -08 000000085 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:10:32.469 -08 000000085 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:32.533 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:10:32.533 -08 000000085 INF: ======================================
17-02-28 20:10:32.534 -08 000000098 INF: ===================Move X,Y===================
17-02-28 20:10:32.535 -08 000000098 INF: ======================================
17-02-28 20:10:32.537 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:32.537 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:32.538 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:10:32.538 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:10:32.594 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:10:32.594 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:10:32.655 -08 000000083 INF: FPGA: Recv ZFREQCL
17-02-28 20:10:32.655 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:10:32.656 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:32.656 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:10:32.719 -08 000000039 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:10:32.720 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:10:32.720 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:32.721 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:32.722 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:10:32.722 -08 000000032 INF: ===================Set YMotor gains for scans===================
17-02-28 20:10:32.722 -08 000000032 INF: ======================================
17-02-28 20:10:32.722 -08 000000085 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:10:32.723 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:10:32.724 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:10:32.725 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:10:32.725 -08 000000085 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:10:32.779 -08 000000083 INF: FPGA: Recv TDIYPOS
17-02-28 20:10:32.779 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:10:32.781 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:10:32.781 -08 000000085 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:10:32.841 -08 000000054 INF: FPGA: Recv TDIYARM2
17-02-28 20:10:32.842 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:10:32.843 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:10:32.844 -08 000000085 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:10:32.845 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:10:32.846 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:10:32.847 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:10:32.847 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:10:33.214 -08 000000085 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:10:33.214 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:10:33.214 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:10:33.229 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:10:33.231 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:10:33.609 -08 000000085 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:10:33.609 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:10:33.609 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:10:33.624 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:10:33.626 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:10:33.627 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:10:33.628 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:33.629 -08 000000085 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:10:33.629 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:33.631 -08 000000085 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:10:33.631 -08 000000085 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:10:33.631 -08 000000085 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:10:33.631 -08 000000085 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:10:33.651 -08 000000047 INF: FPGA: Recv ZYT 
17-02-28 20:10:33.651 -08 000000085 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:10:33.651 -08 000000085 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:10:33.713 -08 000000039 INF: FPGA: Recv ZARM
17-02-28 20:10:33.713 -08 000000085 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0523 ms
17-02-28 20:10:33.713 -08 000000085 INF: Z Motor: ArmAbsStepped took 82.1425 ms
17-02-28 20:10:33.713 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:33.715 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:10:33.716 -08 000000085 INF: ======================================
17-02-28 20:10:33.717 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:33.718 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:33.718 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:10:33.718 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:10:33.719 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:10:33.720 -08 000000081 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:10:33.720 -08 000000081 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:10:33.720 -08 000000081 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:10:33.720 -08 000000081 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:10:33.720 -08 000000081 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:10:33.720 -08 000000106 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:10:33.721 -08 000000106 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:10:33.721 -08 000000106 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:10:33.721 -08 000000106 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:10:33.724 -08 000000106 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:10:34.151 -08 000000105 INF: FPGA: Recv EX2MV
17-02-28 20:10:34.151 -08 000000105 INF: FPGA: Recv EX1MV
17-02-28 20:10:34.151 -08 000000081 INF: Excitation Filter 2: Moved -107 steps in 430.9738 ms
17-02-28 20:10:34.151 -08 000000106 INF: Excitation Filter 1: Moved -107 steps in 430.1181 ms
17-02-28 20:10:34.151 -08 000000106 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 430.3146 ms
17-02-28 20:10:34.151 -08 000000106 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 430.4222 ms
17-02-28 20:10:34.151 -08 000000081 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 431.0917 ms
17-02-28 20:10:34.151 -08 000000081 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 431.4685 ms
17-02-28 20:10:34.152 -08 000000106 INF: ======================================
17-02-28 20:10:34.152 -08 000000081 INF: ======================================
17-02-28 20:10:34.153 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:10:34.154 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:10:34.155 -08 000000110 INF: ===================Serial===================
17-02-28 20:10:34.155 -08 000000044 INF: ===================Camera TDI===================
17-02-28 20:10:34.155 -08 000000074 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:34.155 -08 000000062 INF: ===================Move Y Motor without settling===================
17-02-28 20:10:34.156 -08 000000062 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:10:34.156 -08 000000062 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:10:34.156 -08 000000110 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:10:34.156 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:34.156 -08 000000110 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:10:34.156 -08 000000044 INF: ===================Camera TDI, Parallel===================
17-02-28 20:10:34.156 -08 000000074 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:10:34.157 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:10:34.157 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:10:34.158 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:34.158 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:34.159 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:34.159 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:34.159 -08 000000074 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:10:34.215 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:10:34.215 -08 000000062 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:10:34.215 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:34.277 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:10:34.277 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:34.308 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:34.308 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:34.309 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:34.309 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:34.339 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:10:34.339 -08 000000062 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:34.339 -08 000000062 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:10:34.339 -08 000000062 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:10:34.405 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:10:34.405 -08 000000062 INF: Y Motor: Start the move command
17-02-28 20:10:34.405 -08 000000062 INF: Y Motor: Xmit t 1\r
17-02-28 20:10:34.458 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:34.458 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:34.459 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:34.459 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:34.464 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:10:34.464 -08 000000062 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:10:34.464 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:34.591 -08 000000062 INF: Y Motor: Unshifted Position: 5935727
17-02-28 20:10:34.608 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:34.608 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:34.609 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:34.609 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:34.641 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:34.758 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:10:34.758 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:10:34.758 -08 000000100 INF: ===================Camera #2 Frame #1===================
17-02-28 20:10:34.759 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:10:34.759 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:10:34.759 -08 000000101 INF: ===================Camera #0 Frame #1===================
17-02-28 20:10:34.764 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:34.903 -08 000000062 INF: Y Motor: Unshifted Position: 5888929
17-02-28 20:10:34.911 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:10:34.911 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2
17-02-28 20:10:34.911 -08 000000100 INF: ===================Camera #2 Frame #2===================
17-02-28 20:10:34.912 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:10:34.912 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:10:34.912 -08 000000101 INF: ===================Camera #0 Frame #3===================
17-02-28 20:10:34.953 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:35.064 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:10:35.064 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:10:35.064 -08 000000100 INF: ===================Camera #2 Frame #4===================
17-02-28 20:10:35.069 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:10:35.069 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:10:35.069 -08 000000101 INF: ===================Camera #0 Frame #4===================
17-02-28 20:10:35.077 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:35.213 -08 000000062 INF: Y Motor: Unshifted Position: 5841969
17-02-28 20:10:35.221 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:10:35.221 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:10:35.221 -08 000000100 INF: ===================Camera #2 Frame #5===================
17-02-28 20:10:35.222 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:10:35.222 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:10:35.222 -08 000000101 INF: ===================Camera #0 Frame #5===================
17-02-28 20:10:35.263 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:35.273 -08 000000084 INF: FPGA: Recv ZWAIT 
17-02-28 20:10:35.273 -08 000000110 INF: ===================Serial===================
17-02-28 20:10:35.275 -08 000000110 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:10:35.275 -08 000000110 INF: ===================Serial===================
17-02-28 20:10:35.276 -08 000000110 INF: ======================================
17-02-28 20:10:35.339 -08 000000090 INF: FPGA: Recv TDIYWAIT
17-02-28 20:10:35.339 -08 000000074 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:35.341 -08 000000074 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:10:35.342 -08 000000081 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:10:35.342 -08 000000054 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:10:35.342 -08 000000081 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:10:35.342 -08 000000081 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:10:35.342 -08 000000081 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:10:35.342 -08 000000054 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:10:35.342 -08 000000054 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:10:35.342 -08 000000054 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:10:35.342 -08 000000081 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:10:35.343 -08 000000054 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:10:35.374 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:10:35.374 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:10:35.374 -08 000000100 INF: ===================Camera #2 Frame #6===================
17-02-28 20:10:35.375 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:10:35.375 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:10:35.375 -08 000000101 INF: ===================Camera #0 Frame #6===================
17-02-28 20:10:35.377 -08 000000100 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:10:35.378 -08 000000100 INF: ===================CameraTDI Cleanup===================
17-02-28 20:10:35.378 -08 000000101 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:10:35.379 -08 000000101 INF: ===================CameraTDI Cleanup===================
17-02-28 20:10:35.391 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:35.402 -08 000000100 INF: Camera #2 ReleaseBuffer
17-02-28 20:10:35.402 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:10:35.406 -08 000000100 INF: ======================================
17-02-28 20:10:35.426 -08 000000101 INF: Camera #0 ReleaseBuffer
17-02-28 20:10:35.426 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:10:35.427 -08 000000101 INF: ======================================
17-02-28 20:10:35.429 -08 000000044 INF: ===================Camera TDI===================
17-02-28 20:10:35.430 -08 000000044 INF: ======================================
17-02-28 20:10:35.527 -08 000000062 INF: Y Motor: Unshifted Position: 5797061
17-02-28 20:10:35.577 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:35.714 -08 000000062 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:10:35.714 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:10:35.714 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:35.772 -08 000000051 INF: FPGA: Recv EX1MV
17-02-28 20:10:35.772 -08 000000051 INF: FPGA: Recv EX2MV
17-02-28 20:10:35.772 -08 000000054 INF: Excitation Filter 2: Moved 107 steps in 430.0823 ms
17-02-28 20:10:35.772 -08 000000081 INF: Excitation Filter 1: Moved 107 steps in 430.2488 ms
17-02-28 20:10:35.772 -08 000000081 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 430.3618 ms
17-02-28 20:10:35.772 -08 000000081 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 430.4339 ms
17-02-28 20:10:35.772 -08 000000054 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 430.1842 ms
17-02-28 20:10:35.772 -08 000000054 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 430.5917 ms
17-02-28 20:10:35.772 -08 000000081 INF: ======================================
17-02-28 20:10:35.773 -08 000000054 INF: ======================================
17-02-28 20:10:35.774 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:10:35.774 -08 000000062 INF: Y Motor: Moved to 62.9704 after 1310 ms
17-02-28 20:10:35.774 -08 000000062 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:10:35.774 -08 000000074 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:35.775 -08 000000074 INF: ======================================
17-02-28 20:10:35.839 -08 000000062 INF: Y Motor: Recv v 4097\r
17-02-28 20:10:35.839 -08 000000062 INF: Y Motor: Status After move finished OK:
17-02-28 20:10:35.839 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:35.901 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:10:35.901 -08 000000062 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:35.901 -08 000000062 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:10:35.963 -08 000000062 INF: Y Motor: Recv v 134217728\r
17-02-28 20:10:35.963 -08 000000062 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:10:35.963 -08 000000062 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:10:35.963 -08 000000062 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:10:36.025 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:10:36.025 -08 000000062 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:10:36.025 -08 000000062 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:10:36.025 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:36.087 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:10:36.087 -08 000000062 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:10:36.087 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:36.149 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:10:36.149 -08 000000062 INF: ======================================
17-02-28 20:10:36.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:10:36.151 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:10:36.152 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:36.152 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:10:36.210 -08 000000039 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:10:36.210 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:10:36.276 -08 000000083 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:10:36.276 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:10:36.335 -08 000000076 INF: FPGA: Recv ZADCR 2423
17-02-28 20:10:36.335 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:10:36.335 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:10:36.397 -08 000000030 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:10:36.397 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:10:36.397 -08 000000042 INF: TDIScan finished after 6914.9435 ms
17-02-28 20:10:36.397 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:10:36.397 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:10:36.397 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:10:36.462 -08 000000104 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:10:36.463 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:36.463 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:36.464 -08 000000034 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:10:36.464 -08 000000062 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:10:36.464 -08 000000068 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:10:36.464 -08 000000062 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:10:36.464 -08 000000062 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:10:36.464 -08 000000068 INF: ======================================
17-02-28 20:10:36.465 -08 000000034 INF: ======================================
17-02-28 20:10:36.526 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:10:36.526 -08 000000062 INF: ======================================
17-02-28 20:10:36.527 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:36.528 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:36.529 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:10:36.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:36.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:10:36.590 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:36.590 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:10:36.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:36.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:10:36.673 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:10:36.673 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:10:36.674 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:10:36.674 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:10:36.682 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:10:36.682 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:10:36.682 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:10:37.368 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:10:37.391 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0818854723820629Best Z position at top surface = -0.153584374762351Best Z position at top surface + compensator offset = -0.130884374762351 C:2,L:6,B
17-02-28 20:10:37.393 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.153584374762351
17-02-28 20:10:37.393 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94588
17-02-28 20:10:37.393 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0818854723820629
17-02-28 20:10:37.393 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.60089
17-02-28 20:10:37.393 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0818854723820629.
17-02-28 20:10:37.393 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:10:37.529 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:10:37.529 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:10:37.583 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:10:37.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:10:37.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:37.585 -08 000000042 INF: Lane 6, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:10:37.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:37.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:37.586 -08 000000034 INF: ===================Move Tilt Motor 1===================
17-02-28 20:10:37.587 -08 000000010 INF: ===================Move Tilt Motor 2===================
17-02-28 20:10:37.587 -08 000000053 INF: ===================Move Tilt Motor 3===================
17-02-28 20:10:37.587 -08 000000053 INF: ======================================
17-02-28 20:10:37.587 -08 000000010 INF: ======================================
17-02-28 20:10:37.588 -08 000000034 INF: ======================================
17-02-28 20:10:37.589 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:37.590 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:37.590 -08 000000042 INF: ETF Best Z: -0.08188547 mm (21465 DAC)
17-02-28 20:10:37.590 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:37.591 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:37.591 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:10:37.591 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:37.592 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:38.022 -08 000000042 INF: Swath 1 position calculated to be: {X=82.45318, Y=39.78827} from estimated center X= 82.97199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:10:38.022 -08 000000042 INF: Swath 2 position calculated to be: {X=83.56118, Y=39.78827} from estimated center X= 82.97199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:10:38.028 -08 000000042 INF: Swath 0: Converted transform from (-41.72108, -9.497229) pixels to (-0.01449, -0.003105) mm.
17-02-28 20:10:38.033 -08 000000042 INF: Swath 1: Converted transform from (-66.25078, -8.497438) pixels to (-0.02277, -0.00276) mm.
17-02-28 20:10:38.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827===================
17-02-28 20:10:38.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827===================
17-02-28 20:10:38.035 -08 000000042 INF: Transformed XStagePosition from 82.45318 mm to 82.4386884057894 mm.
17-02-28 20:10:38.046 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5751728016194 mm.
17-02-28 20:10:38.046 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3751728016194 mm.
17-02-28 20:10:38.046 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4659228016194 mm.
17-02-28 20:10:38.049 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:38.049 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:10:38.049 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:38.049 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = F_1
17-02-28 20:10:38.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:38.055 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:38.056 -08 000000064 INF: ===================MoveEmissionFilters===================
17-02-28 20:10:38.056 -08 000000101 INF: ===================Move X,Y===================
17-02-28 20:10:38.056 -08 000000100 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:10:38.057 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:10:38.057 -08 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:10:38.057 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:10:38.057 -08 000000102 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:10:38.057 -08 000000101 INF: ===================Move X,Y, Parallel===================
17-02-28 20:10:38.057 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:10:38.057 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:10:38.057 -08 000000100 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:10:38.057 -08 000000102 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:10:38.058 -08 000000100 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:10:38.058 -08 000000100 INF: Z Motor: Moving to -0.1019 mm, started at -0.0100 mm
17-02-28 20:10:38.058 -08 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:10:38.058 -08 000000100 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:10:38.058 -08 000000045 INF: ===================Move X Motor without settling===================
17-02-28 20:10:38.058 -08 000000069 INF: ===================Move Y Motor without settling===================
17-02-28 20:10:38.058 -08 000000045 INF: X Motor: Xmit PR VM\n
17-02-28 20:10:38.058 -08 000000069 INF: Y Motor: Moving to 64.5752 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:10:38.058 -08 000000085 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:10:38.058 -08 000000083 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:10:38.058 -08 000000069 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:10:38.058 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:38.058 -08 000000047 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:10:38.059 -08 000000068 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:10:38.059 -08 000000074 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:10:38.059 -08 000000085 INF: ======================================
17-02-28 20:10:38.059 -08 000000052 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:10:38.059 -08 000000068 INF: ======================================
17-02-28 20:10:38.059 -08 000000052 INF: ======================================
17-02-28 20:10:38.059 -08 000000083 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:10:38.060 -08 000000083 INF: ======================================
17-02-28 20:10:38.060 -08 000000074 INF: ======================================
17-02-28 20:10:38.061 -08 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:10:38.061 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:10:38.061 -08 000000052 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:10:38.061 -08 000000066 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:10:38.061 -08 000000066 INF: ======================================
17-02-28 20:10:38.062 -08 000000047 INF: ======================================
17-02-28 20:10:38.062 -08 000000034 INF: ======================================
17-02-28 20:10:38.062 -08 000000010 INF: ======================================
17-02-28 20:10:38.062 -08 000000052 INF: ======================================
17-02-28 20:10:38.063 -08 000000102 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:10:38.064 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:10:38.064 -08 000000102 INF: ======================================
17-02-28 20:10:38.065 -08 000000098 INF: ======================================
17-02-28 20:10:38.066 -08 000000064 INF: ======================================
17-02-28 20:10:38.084 -08 000000104 INF: FPGA: Recv ZTRG 
17-02-28 20:10:38.084 -08 000000100 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:10:38.086 -08 000000045 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:10:38.086 -08 000000045 INF: X Motor: Xmit PR VI\n
17-02-28 20:10:38.146 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:10:38.146 -08 000000100 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:10:38.146 -08 000000100 INF: FPGA: Xmit ZMV 26708\n
17-02-28 20:10:38.148 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:10:38.148 -08 000000069 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:10:38.148 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:38.148 -08 000000045 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:10:38.148 -08 000000045 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:10:38.148 -08 000000045 INF: X Motor: Moving to 82.4387 mm @15.000 mm/sec, started at 83.0112 mm
17-02-28 20:10:38.148 -08 000000045 INF: X Motor: Xmit MA 9600\n
17-02-28 20:10:38.209 -08 000000055 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:10:38.209 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:10:38.210 -08 000000045 INF: X Motor: Recv MA 9600\r\n>
17-02-28 20:10:38.210 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:10:38.210 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:38.210 -08 000000045 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:10:38.271 -08 000000052 INF: FPGA: Recv ZMV 
17-02-28 20:10:38.271 -08 000000100 INF: Z Motor: MoveAndTrigger 'ZMV' command took 124.8644 ms
17-02-28 20:10:38.271 -08 000000100 INF: FPGA: Xmit ZDACR\n
17-02-28 20:10:38.272 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:10:38.272 -08 000000069 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:38.272 -08 000000069 INF: Y Motor: Set target position to 5957517 encoder counts
17-02-28 20:10:38.272 -08 000000069 INF: Y Motor: Xmit s r0xca 5957517\r
17-02-28 20:10:38.332 -08 000000104 INF: FPGA: Recv ZDACR 26708
17-02-28 20:10:38.332 -08 000000100 INF: Z Motor: MoveAndTrigger took 274.4784 ms w/comms
17-02-28 20:10:38.332 -08 000000100 INF: Z Motor: After move to -0.1019, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:10:38.332 -08 000000100 INF: Z Motor: MoveAbsStepped took 274.6149 ms
17-02-28 20:10:38.333 -08 000000100 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:10:38.334 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:10:38.334 -08 000000069 INF: Y Motor: Start the move command
17-02-28 20:10:38.334 -08 000000069 INF: Y Motor: Xmit t 1\r
17-02-28 20:10:38.334 -08 000000100 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:10:38.335 -08 000000068 INF: ===================TDI Scan Setup===================
17-02-28 20:10:38.335 -08 000000066 INF: ===================Camera Arm TDI===================
17-02-28 20:10:38.335 -08 000000068 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:38.336 -08 000000066 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:10:38.336 -08 000000068 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:10:38.336 -08 000000066 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:10:38.336 -08 000000068 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:10:38.337 -08 000000068 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:10:38.394 -08 000000087 INF: FPGA: Recv ZSEL 
17-02-28 20:10:38.395 -08 000000068 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:10:38.395 -08 000000068 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:10:38.397 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:10:38.397 -08 000000069 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:10:38.397 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:38.457 -08 000000051 INF: FPGA: Recv TDIBB
17-02-28 20:10:38.457 -08 000000068 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:10:38.458 -08 000000068 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:10:38.458 -08 000000068 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:38.460 -08 000000068 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:10:38.460 -08 000000068 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:10:38.460 -08 000000068 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:10:38.521 -08 000000102 INF: FPGA: Recv ZSTEP 
17-02-28 20:10:38.521 -08 000000068 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:38.523 -08 000000069 INF: Y Motor: Unshifted Position: 5878534
17-02-28 20:10:38.523 -08 000000068 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:10:38.523 -08 000000068 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:38.525 -08 000000068 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:10:38.525 -08 000000068 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:10:38.525 -08 000000068 INF: Z Motor: Arming to move to -0.0619 mm
17-02-28 20:10:38.525 -08 000000068 INF: FPGA: Xmit ZYT 6437517 4\n
17-02-28 20:10:38.573 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:38.583 -08 000000044 INF: FPGA: Recv ZYT 
17-02-28 20:10:38.583 -08 000000068 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6378534 enc / 63.785 mm / ) = 6437517 enc / 64.375 mm
17-02-28 20:10:38.583 -08 000000068 INF: FPGA: Xmit ZARM 16223\n
17-02-28 20:10:38.645 -08 000000091 INF: FPGA: Recv ZARM
17-02-28 20:10:38.645 -08 000000068 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9956 ms
17-02-28 20:10:38.645 -08 000000068 INF: Z Motor: ArmAbsStepped took 119.9443 ms
17-02-28 20:10:38.645 -08 000000068 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:38.646 -08 000000068 INF: ===================TDI Scan Setup===================
17-02-28 20:10:38.647 -08 000000045 INF: X Motor: Xmit PR ER\n
17-02-28 20:10:38.648 -08 000000068 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:10:38.648 -08 000000068 INF: ===================TDI Scan Setup===================
17-02-28 20:10:38.650 -08 000000068 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:10:38.650 -08 000000068 INF: ===================TDI Scan Setup===================
17-02-28 20:10:38.651 -08 000000068 INF: ======================================
17-02-28 20:10:38.697 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:38.709 -08 000000045 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:10:38.709 -08 000000045 INF: X Motor: Moved to 82.4375 after 499 ms
17-02-28 20:10:38.709 -08 000000045 INF: ======================================
17-02-28 20:10:38.833 -08 000000069 INF: Y Motor: Unshifted Position: 5957518
17-02-28 20:10:38.833 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:10:38.833 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:38.895 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:10:38.895 -08 000000069 INF: Y Motor: Moved to 64.5752 after 498 ms
17-02-28 20:10:38.895 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:10:38.960 -08 000000069 INF: Y Motor: Recv v 4096\r
17-02-28 20:10:38.960 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:10:38.960 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:39.022 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:10:39.022 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:39.022 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:10:39.084 -08 000000069 INF: Y Motor: Recv v 402653184\r
17-02-28 20:10:39.084 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:10:39.084 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:10:39.084 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:10:39.145 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:10:39.145 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:10:39.145 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:10:39.145 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:39.207 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:10:39.207 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:10:39.207 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:39.272 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:10:39.272 -08 000000069 INF: ======================================
17-02-28 20:10:39.273 -08 000000066 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:10:39.273 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:10:39.273 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:10:39.273 -08 000000101 INF: ===================Move X,Y===================
17-02-28 20:10:39.274 -08 000000101 INF: ======================================
17-02-28 20:10:39.289 -08 000000066 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:10:39.291 -08 000000066 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:10:40.257 -08 000000066 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:10:40.257 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:10:40.257 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:10:40.272 -08 000000066 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:10:40.274 -08 000000066 INF: ===================Camera Arm TDI===================
17-02-28 20:10:40.275 -08 000000066 INF: ======================================
17-02-28 20:10:40.276 -08 000000100 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:10:40.277 -08 000000100 INF: ======================================
17-02-28 20:10:40.278 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:40.279 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:40.279 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:10:40.279 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:10:40.332 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:10:40.332 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:10:40.392 -08 000000100 INF: FPGA: Recv ZFREQCL
17-02-28 20:10:40.392 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:10:40.392 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:40.392 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:10:40.455 -08 000000068 INF: FPGA: Recv TDIYERD 6457518
17-02-28 20:10:40.455 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457518 counts (64.575 mm)
17-02-28 20:10:40.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:40.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:40.456 -08 000000076 INF: ===================TDI FPGA Arm===================
17-02-28 20:10:40.456 -08 000000074 INF: ===================Set YMotor gains for scans===================
17-02-28 20:10:40.457 -08 000000074 INF: ======================================
17-02-28 20:10:40.457 -08 000000076 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:10:40.457 -08 000000076 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:10:40.458 -08 000000076 INF: FPGA: Xmit TDIYPOS 6346592\n
17-02-28 20:10:40.516 -08 000000047 INF: FPGA: Recv TDIYPOS
17-02-28 20:10:40.516 -08 000000076 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:10:40.518 -08 000000076 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:10:40.518 -08 000000076 INF: FPGA: Xmit TDIYARM3 139264 6437517 1 1\n
17-02-28 20:10:40.579 -08 000000053 INF: FPGA: Recv TDIYARM3
17-02-28 20:10:40.579 -08 000000076 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:10:40.580 -08 000000076 INF: ===================TDI FPGA Arm===================
17-02-28 20:10:40.581 -08 000000076 INF: ======================================
17-02-28 20:10:40.582 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:40.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:40.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:40.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:40.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:40.585 -08 000000084 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:10:40.585 -08 000000058 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:10:40.585 -08 000000084 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:10:40.585 -08 000000084 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:10:40.585 -08 000000084 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:10:40.585 -08 000000058 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:10:40.585 -08 000000058 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:10:40.585 -08 000000058 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:10:40.585 -08 000000084 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:10:40.586 -08 000000058 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:10:40.953 -08 000000081 INF: FPGA: Recv EX2MV
17-02-28 20:10:40.953 -08 000000081 INF: FPGA: Recv EX1MV
17-02-28 20:10:40.953 -08 000000058 INF: Excitation Filter 1: Moved -107 steps in 367.8769 ms
17-02-28 20:10:40.953 -08 000000058 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.9708 ms
17-02-28 20:10:40.953 -08 000000058 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.0601 ms
17-02-28 20:10:40.953 -08 000000084 INF: Excitation Filter 2: Moved -107 steps in 368.0446 ms
17-02-28 20:10:40.953 -08 000000084 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.2688 ms
17-02-28 20:10:40.953 -08 000000084 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.3395 ms
17-02-28 20:10:40.953 -08 000000058 INF: ======================================
17-02-28 20:10:40.953 -08 000000084 INF: ======================================
17-02-28 20:10:40.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:40.956 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:40.956 -08 000000102 INF: ===================Camera TDI===================
17-02-28 20:10:40.956 -08 000000051 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:40.956 -08 000000091 INF: ===================FPGA Z Wait===================
17-02-28 20:10:40.957 -08 000000064 INF: ===================Move Y Motor without settling===================
17-02-28 20:10:40.957 -08 000000091 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:10:40.957 -08 000000064 INF: Y Motor: Moving to 14.9268 mm @6.500 mm/sec, started at 64.5752 mm
17-02-28 20:10:40.957 -08 000000064 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:10:40.957 -08 000000102 INF: ===================Camera TDI, Parallel===================
17-02-28 20:10:40.957 -08 000000051 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:10:40.957 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:40.958 -08 000000051 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:10:40.958 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:10:40.958 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:10:40.960 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:40.960 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:40.960 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:40.960 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:41.017 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:10:41.017 -08 000000064 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:10:41.017 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:41.081 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:10:41.081 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:41.110 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:41.110 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:41.110 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:41.110 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:41.143 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:10:41.143 -08 000000064 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:41.143 -08 000000064 INF: Y Motor: Set target position to 992684 encoder counts
17-02-28 20:10:41.143 -08 000000064 INF: Y Motor: Xmit s r0xca 992684\r
17-02-28 20:10:41.205 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:10:41.205 -08 000000064 INF: Y Motor: Start the move command
17-02-28 20:10:41.205 -08 000000064 INF: Y Motor: Xmit t 1\r
17-02-28 20:10:41.260 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:41.260 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:41.260 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:41.260 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:41.267 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:10:41.267 -08 000000064 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:10:41.267 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:41.327 -08 000000010 INF: FPGA: Recv ZWAIT 
17-02-28 20:10:41.327 -08 000000091 INF: ======================================
17-02-28 20:10:41.392 -08 000000064 INF: Y Motor: Unshifted Position: 5895664
17-02-28 20:10:41.410 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:10:41.410 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:10:41.410 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:10:41.410 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:10:41.410 -08 000000034 INF: ===================Camera #0 Frame #5===================
17-02-28 20:10:41.410 -08 000000090 INF: ===================Camera #2 Frame #5===================
17-02-28 20:10:41.442 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:41.568 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:41.575 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:10:41.575 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:10:41.575 -08 000000034 INF: ===================Camera #0 Frame #11===================
17-02-28 20:10:41.576 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:10:41.576 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:10:41.576 -08 000000090 INF: ===================Camera #2 Frame #11===================
17-02-28 20:10:41.704 -08 000000064 INF: Y Motor: Unshifted Position: 5692215
17-02-28 20:10:41.743 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:10:41.743 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:10:41.743 -08 000000034 INF: ===================Camera #0 Frame #17===================
17-02-28 20:10:41.745 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:10:41.745 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:10:41.745 -08 000000090 INF: ===================Camera #2 Frame #17===================
17-02-28 20:10:41.754 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:41.878 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:41.911 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:10:41.911 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:10:41.911 -08 000000034 INF: ===================Camera #0 Frame #23===================
17-02-28 20:10:41.914 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:10:41.914 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:10:41.914 -08 000000090 INF: ===================Camera #2 Frame #23===================
17-02-28 20:10:42.017 -08 000000064 INF: Y Motor: Unshifted Position: 5488557
17-02-28 20:10:42.067 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:42.079 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:10:42.079 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:10:42.079 -08 000000034 INF: ===================Camera #0 Frame #29===================
17-02-28 20:10:42.083 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:10:42.083 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:10:42.083 -08 000000090 INF: ===================Camera #2 Frame #29===================
17-02-28 20:10:42.193 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:42.247 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:10:42.247 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:10:42.247 -08 000000034 INF: ===================Camera #0 Frame #35===================
17-02-28 20:10:42.252 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:10:42.252 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:10:42.252 -08 000000090 INF: ===================Camera #2 Frame #36===================
17-02-28 20:10:42.328 -08 000000064 INF: Y Motor: Unshifted Position: 5286404
17-02-28 20:10:42.378 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:42.415 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:10:42.415 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:10:42.415 -08 000000034 INF: ===================Camera #0 Frame #42===================
17-02-28 20:10:42.425 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:10:42.425 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:10:42.425 -08 000000090 INF: ===================Camera #2 Frame #42===================
17-02-28 20:10:42.503 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:42.587 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:10:42.587 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:10:42.587 -08 000000034 INF: ===================Camera #0 Frame #48===================
17-02-28 20:10:42.595 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:10:42.595 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:10:42.595 -08 000000090 INF: ===================Camera #2 Frame #48===================
17-02-28 20:10:42.641 -08 000000064 INF: Y Motor: Unshifted Position: 5082726
17-02-28 20:10:42.691 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:42.756 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:10:42.756 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:10:42.756 -08 000000034 INF: ===================Camera #0 Frame #54===================
17-02-28 20:10:42.765 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:10:42.765 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:10:42.765 -08 000000090 INF: ===================Camera #2 Frame #54===================
17-02-28 20:10:42.815 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:42.925 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:10:42.925 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:10:42.925 -08 000000034 INF: ===================Camera #0 Frame #60===================
17-02-28 20:10:42.935 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:10:42.935 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:10:42.935 -08 000000090 INF: ===================Camera #2 Frame #61===================
17-02-28 20:10:42.951 -08 000000064 INF: Y Motor: Unshifted Position: 4881231
17-02-28 20:10:43.001 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:43.094 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:10:43.094 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:10:43.094 -08 000000034 INF: ===================Camera #0 Frame #67===================
17-02-28 20:10:43.108 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:10:43.108 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:10:43.108 -08 000000090 INF: ===================Camera #2 Frame #67===================
17-02-28 20:10:43.128 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:43.265 -08 000000064 INF: Y Motor: Unshifted Position: 4677134
17-02-28 20:10:43.266 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:10:43.266 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:10:43.266 -08 000000034 INF: ===================Camera #0 Frame #73===================
17-02-28 20:10:43.278 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:10:43.278 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:10:43.278 -08 000000090 INF: ===================Camera #2 Frame #73===================
17-02-28 20:10:43.315 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:43.435 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:10:43.435 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:10:43.435 -08 000000034 INF: ===================Camera #0 Frame #79===================
17-02-28 20:10:43.439 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:43.448 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:10:43.448 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:10:43.448 -08 000000090 INF: ===================Camera #2 Frame #80===================
17-02-28 20:10:43.575 -08 000000064 INF: Y Motor: Unshifted Position: 4475403
17-02-28 20:10:43.604 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:10:43.604 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:10:43.604 -08 000000034 INF: ===================Camera #0 Frame #85===================
17-02-28 20:10:43.622 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:10:43.622 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:10:43.622 -08 000000090 INF: ===================Camera #2 Frame #86===================
17-02-28 20:10:43.625 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:43.752 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:43.773 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:10:43.773 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:10:43.773 -08 000000034 INF: ===================Camera #0 Frame #92===================
17-02-28 20:10:43.793 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:10:43.793 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:10:43.793 -08 000000090 INF: ===================Camera #2 Frame #92===================
17-02-28 20:10:43.888 -08 000000064 INF: Y Motor: Unshifted Position: 4271734
17-02-28 20:10:43.938 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:43.946 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:10:43.946 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:10:43.946 -08 000000034 INF: ===================Camera #0 Frame #98===================
17-02-28 20:10:43.964 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:10:43.964 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:10:43.964 -08 000000090 INF: ===================Camera #2 Frame #99===================
17-02-28 20:10:44.062 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:44.116 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:10:44.116 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:10:44.116 -08 000000034 INF: ===================Camera #0 Frame #104===================
17-02-28 20:10:44.137 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:10:44.137 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:10:44.137 -08 000000090 INF: ===================Camera #2 Frame #105===================
17-02-28 20:10:44.201 -08 000000064 INF: Y Motor: Unshifted Position: 4068066
17-02-28 20:10:44.251 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:44.286 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:10:44.286 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:10:44.286 -08 000000034 INF: ===================Camera #0 Frame #110===================
17-02-28 20:10:44.308 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:10:44.308 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:10:44.308 -08 000000090 INF: ===================Camera #2 Frame #111===================
17-02-28 20:10:44.376 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:44.456 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:10:44.456 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:10:44.456 -08 000000034 INF: ===================Camera #0 Frame #117===================
17-02-28 20:10:44.479 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:10:44.479 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:10:44.479 -08 000000090 INF: ===================Camera #2 Frame #118===================
17-02-28 20:10:44.512 -08 000000064 INF: Y Motor: Unshifted Position: 3866570
17-02-28 20:10:44.562 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:44.629 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:10:44.629 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:10:44.629 -08 000000034 INF: ===================Camera #0 Frame #123===================
17-02-28 20:10:44.654 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:10:44.654 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:10:44.654 -08 000000090 INF: ===================Camera #2 Frame #124===================
17-02-28 20:10:44.688 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:44.799 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:10:44.799 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:10:44.799 -08 000000034 INF: ===================Camera #0 Frame #129===================
17-02-28 20:10:44.824 -08 000000064 INF: Y Motor: Unshifted Position: 3663117
17-02-28 20:10:44.825 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:10:44.825 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:10:44.825 -08 000000090 INF: ===================Camera #2 Frame #130===================
17-02-28 20:10:44.874 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:44.967 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:10:44.967 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:10:44.967 -08 000000034 INF: ===================Camera #0 Frame #135===================
17-02-28 20:10:44.996 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:10:44.996 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:10:44.996 -08 000000090 INF: ===================Camera #2 Frame #137===================
17-02-28 20:10:44.998 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:45.137 -08 000000064 INF: Y Motor: Unshifted Position: 3461406
17-02-28 20:10:45.137 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:10:45.137 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:10:45.137 -08 000000034 INF: ===================Camera #0 Frame #142===================
17-02-28 20:10:45.170 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:10:45.170 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:10:45.170 -08 000000090 INF: ===================Camera #2 Frame #143===================
17-02-28 20:10:45.187 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:45.309 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:10:45.309 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:10:45.309 -08 000000034 INF: ===================Camera #0 Frame #148===================
17-02-28 20:10:45.311 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:45.341 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:10:45.341 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:10:45.341 -08 000000090 INF: ===================Camera #2 Frame #149===================
17-02-28 20:10:45.447 -08 000000064 INF: Y Motor: Unshifted Position: 3257734
17-02-28 20:10:45.479 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:10:45.479 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:10:45.479 -08 000000034 INF: ===================Camera #0 Frame #154===================
17-02-28 20:10:45.497 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:45.512 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:10:45.512 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:10:45.512 -08 000000090 INF: ===================Camera #2 Frame #156===================
17-02-28 20:10:45.624 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:45.649 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:10:45.649 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:10:45.649 -08 000000034 INF: ===================Camera #0 Frame #161===================
17-02-28 20:10:45.686 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:10:45.686 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:10:45.686 -08 000000090 INF: ===================Camera #2 Frame #162===================
17-02-28 20:10:45.760 -08 000000064 INF: Y Motor: Unshifted Position: 3054292
17-02-28 20:10:45.810 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:45.822 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:10:45.822 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:10:45.822 -08 000000034 INF: ===================Camera #0 Frame #167===================
17-02-28 20:10:45.857 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:10:45.857 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:10:45.857 -08 000000090 INF: ===================Camera #2 Frame #168===================
17-02-28 20:10:45.936 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:45.992 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:10:45.992 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:10:45.992 -08 000000034 INF: ===================Camera #0 Frame #173===================
17-02-28 20:10:46.028 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:10:46.028 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:10:46.028 -08 000000090 INF: ===================Camera #2 Frame #175===================
17-02-28 20:10:46.073 -08 000000064 INF: Y Motor: Unshifted Position: 2852798
17-02-28 20:10:46.123 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:46.162 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:10:46.162 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:10:46.162 -08 000000034 INF: ===================Camera #0 Frame #179===================
17-02-28 20:10:46.203 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:10:46.203 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:10:46.203 -08 000000090 INF: ===================Camera #2 Frame #181===================
17-02-28 20:10:46.249 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:46.333 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:10:46.333 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:10:46.333 -08 000000034 INF: ===================Camera #0 Frame #186===================
17-02-28 20:10:46.374 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:10:46.374 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:10:46.374 -08 000000090 INF: ===================Camera #2 Frame #187===================
17-02-28 20:10:46.385 -08 000000064 INF: Y Motor: Unshifted Position: 2648480
17-02-28 20:10:46.435 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:46.506 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:10:46.506 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:10:46.506 -08 000000034 INF: ===================Camera #0 Frame #192===================
17-02-28 20:10:46.545 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:10:46.545 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:10:46.545 -08 000000090 INF: ===================Camera #2 Frame #194===================
17-02-28 20:10:46.559 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:46.676 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:10:46.676 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:10:46.676 -08 000000034 INF: ===================Camera #0 Frame #198===================
17-02-28 20:10:46.698 -08 000000064 INF: Y Motor: Unshifted Position: 2446986
17-02-28 20:10:46.719 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:10:46.719 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:10:46.719 -08 000000090 INF: ===================Camera #2 Frame #200===================
17-02-28 20:10:46.748 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:46.846 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:10:46.846 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:10:46.846 -08 000000034 INF: ===================Camera #0 Frame #205===================
17-02-28 20:10:46.874 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:46.890 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:10:46.890 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:10:46.890 -08 000000090 INF: ===================Camera #2 Frame #206===================
17-02-28 20:10:47.008 -08 000000064 INF: Y Motor: Unshifted Position: 2243317
17-02-28 20:10:47.019 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:10:47.019 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:10:47.019 -08 000000034 INF: ===================Camera #0 Frame #211===================
17-02-28 20:10:47.058 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:47.061 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:10:47.061 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:10:47.061 -08 000000090 INF: ===================Camera #2 Frame #213===================
17-02-28 20:10:47.185 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:47.189 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:10:47.189 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:10:47.189 -08 000000034 INF: ===================Camera #0 Frame #217===================
17-02-28 20:10:47.235 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:10:47.235 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:10:47.235 -08 000000090 INF: ===================Camera #2 Frame #219===================
17-02-28 20:10:47.322 -08 000000064 INF: Y Motor: Unshifted Position: 2040952
17-02-28 20:10:47.358 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:10:47.358 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:10:47.358 -08 000000034 INF: ===================Camera #0 Frame #223===================
17-02-28 20:10:47.372 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:47.406 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:10:47.406 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:10:47.406 -08 000000090 INF: ===================Camera #2 Frame #225===================
17-02-28 20:10:47.496 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:47.528 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:10:47.528 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:10:47.528 -08 000000034 INF: ===================Camera #0 Frame #230===================
17-02-28 20:10:47.577 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:10:47.577 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:10:47.577 -08 000000090 INF: ===================Camera #2 Frame #232===================
17-02-28 20:10:47.632 -08 000000064 INF: Y Motor: Unshifted Position: 1837499
17-02-28 20:10:47.682 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:47.701 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:10:47.701 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:10:47.701 -08 000000034 INF: ===================Camera #0 Frame #236===================
17-02-28 20:10:47.751 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:10:47.751 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:10:47.751 -08 000000090 INF: ===================Camera #2 Frame #238===================
17-02-28 20:10:47.809 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:47.871 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:10:47.871 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:10:47.871 -08 000000034 INF: ===================Camera #0 Frame #242===================
17-02-28 20:10:47.922 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:10:47.922 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:10:47.922 -08 000000090 INF: ===================Camera #2 Frame #244===================
17-02-28 20:10:47.945 -08 000000064 INF: Y Motor: Unshifted Position: 1634047
17-02-28 20:10:47.995 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:48.041 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:10:48.041 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:10:48.041 -08 000000034 INF: ===================Camera #0 Frame #249===================
17-02-28 20:10:48.093 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:10:48.093 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:10:48.093 -08 000000090 INF: ===================Camera #2 Frame #251===================
17-02-28 20:10:48.119 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:48.214 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:10:48.214 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:10:48.214 -08 000000034 INF: ===================Camera #0 Frame #255===================
17-02-28 20:10:48.258 -08 000000064 INF: Y Motor: Unshifted Position: 1432329
17-02-28 20:10:48.267 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:10:48.267 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:10:48.267 -08 000000090 INF: ===================Camera #2 Frame #257===================
17-02-28 20:10:48.308 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:48.384 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:10:48.384 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:10:48.384 -08 000000034 INF: ===================Camera #0 Frame #261===================
17-02-28 20:10:48.432 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:48.438 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:10:48.438 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:10:48.438 -08 000000090 INF: ===================Camera #2 Frame #263===================
17-02-28 20:10:48.554 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:10:48.554 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:10:48.554 -08 000000034 INF: ===================Camera #0 Frame #268===================
17-02-28 20:10:48.568 -08 000000064 INF: Y Motor: Unshifted Position: 1228646
17-02-28 20:10:48.609 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:10:48.609 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:10:48.609 -08 000000090 INF: ===================Camera #2 Frame #270===================
17-02-28 20:10:48.618 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:48.692 -08 000000030 INF: FPGA: Recv TDIYWAIT
17-02-28 20:10:48.693 -08 000000051 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:48.695 -08 000000051 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:10:48.695 -08 000000084 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:10:48.696 -08 000000010 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:10:48.696 -08 000000084 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:10:48.696 -08 000000084 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:10:48.696 -08 000000084 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:10:48.696 -08 000000084 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:10:48.696 -08 000000010 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:10:48.696 -08 000000010 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:10:48.696 -08 000000010 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:10:48.697 -08 000000010 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:10:48.726 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:10:48.726 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:10:48.726 -08 000000034 INF: ===================Camera #0 Frame #272===================
17-02-28 20:10:48.739 -08 000000034 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:10:48.740 -08 000000034 INF: ===================CameraTDI Cleanup===================
17-02-28 20:10:48.744 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:48.882 -08 000000064 INF: Y Motor: Unshifted Position: 1025207
17-02-28 20:10:48.903 -08 000000034 INF: Camera #0 ReleaseBuffer
17-02-28 20:10:48.903 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:10:48.903 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:10:48.903 -08 000000090 INF: ===================Camera #2 Frame #272===================
17-02-28 20:10:48.903 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:10:48.909 -08 000000090 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:10:48.910 -08 000000090 INF: ===================CameraTDI Cleanup===================
17-02-28 20:10:48.932 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:48.936 -08 000000034 INF: ======================================
17-02-28 20:10:49.066 -08 000000053 INF: FPGA: Recv EX1MV
17-02-28 20:10:49.066 -08 000000053 INF: FPGA: Recv EX2MV
17-02-28 20:10:49.066 -08 000000010 INF: Excitation Filter 2: Moved 107 steps in 369.9271 ms
17-02-28 20:10:49.066 -08 000000010 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.0316 ms
17-02-28 20:10:49.066 -08 000000010 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.1377 ms
17-02-28 20:10:49.066 -08 000000084 INF: Excitation Filter 1: Moved 107 steps in 370.164 ms
17-02-28 20:10:49.066 -08 000000084 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.4137 ms
17-02-28 20:10:49.066 -08 000000084 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.5236 ms
17-02-28 20:10:49.066 -08 000000010 INF: ======================================
17-02-28 20:10:49.066 -08 000000084 INF: ======================================
17-02-28 20:10:49.068 -08 000000064 INF: Y Motor: Unshifted Position: 992685
17-02-28 20:10:49.068 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:10:49.068 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:49.068 -08 000000051 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:49.069 -08 000000051 INF: ======================================
17-02-28 20:10:49.112 -08 000000090 INF: Camera #2 ReleaseBuffer
17-02-28 20:10:49.112 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:10:49.130 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:10:49.130 -08 000000064 INF: Y Motor: Moved to 14.9269 after 7863 ms
17-02-28 20:10:49.130 -08 000000064 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:10:49.149 -08 000000090 INF: ======================================
17-02-28 20:10:49.150 -08 000000102 INF: ===================Camera TDI===================
17-02-28 20:10:49.152 -08 000000102 INF: ======================================
17-02-28 20:10:49.194 -08 000000064 INF: Y Motor: Recv v 4097\r
17-02-28 20:10:49.194 -08 000000064 INF: Y Motor: Status After move finished OK:
17-02-28 20:10:49.194 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:49.256 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:10:49.256 -08 000000064 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:49.256 -08 000000064 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:10:49.318 -08 000000064 INF: Y Motor: Recv v 134217728\r
17-02-28 20:10:49.318 -08 000000064 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:10:49.318 -08 000000064 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:10:49.318 -08 000000064 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:10:49.380 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:10:49.380 -08 000000064 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:10:49.380 -08 000000064 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:10:49.380 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:49.444 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:10:49.444 -08 000000064 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:10:49.444 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:49.504 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:10:49.504 -08 000000064 INF: ======================================
17-02-28 20:10:49.505 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:49.506 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:49.507 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:49.507 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:10:49.564 -08 000000081 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:10:49.564 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:10:49.626 -08 000000106 INF: FPGA: Recv TDIYERD 1492685
17-02-28 20:10:49.626 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:10:49.692 -08 000000069 INF: FPGA: Recv ZADCR 21745
17-02-28 20:10:49.692 -08 000000042 INF: At scan end Y pos = 14.927 and Z pos = -0.083. Y moved -48.539 mm
17-02-28 20:10:49.692 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:10:49.751 -08 000000055 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:10:49.751 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:10:49.751 -08 000000042 INF: TDIScan finished after 11715.4624 ms
17-02-28 20:10:49.751 -08 000000042 INF: Image[0]: Y should trigger at 63.466 mm, 2nd row was at 64.375 mm (error = 0.909 mm)
17-02-28 20:10:49.751 -08 000000042 INF: Image[2]: Y should trigger at 63.466 mm, 2nd row was at 64.375 mm (error = 0.909 mm)
17-02-28 20:10:49.753 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:49.787 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.433 um
17-02-28 20:10:49.787 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:49.788 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:10:49.816 -08 000000039 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:10:49.816 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:49.817 -08 000000098 INF: ===================Dither Clean Up Command===================
17-02-28 20:10:49.817 -08 000000034 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:10:49.817 -08 000000074 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:10:49.817 -08 000000091 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:10:49.817 -08 000000034 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:10:49.817 -08 000000034 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:10:49.818 -08 000000102 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:10:49.818 -08 000000032 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:10:49.818 -08 000000102 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:10:49.818 -08 000000032 INF: ======================================
17-02-28 20:10:49.818 -08 000000091 INF: ======================================
17-02-28 20:10:49.820 -08 000000074 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:10:49.820 -08 000000074 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:10:49.878 -08 000000054 INF: FPGA: Recv ZSEL 
17-02-28 20:10:49.878 -08 000000054 INF: FPGA: Recv ZSTEP 
17-02-28 20:10:49.878 -08 000000102 INF: FPGA: Xmit ZDACW 26708\n
17-02-28 20:10:49.878 -08 000000074 INF: ======================================
17-02-28 20:10:49.880 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:10:49.880 -08 000000034 INF: ======================================
17-02-28 20:10:49.940 -08 000000053 INF: FPGA: Recv ZDACW 
17-02-28 20:10:49.940 -08 000000102 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:10:49.940 -08 000000102 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:10:50.002 -08 000000055 INF: FPGA: Recv TDIBB
17-02-28 20:10:50.002 -08 000000102 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:10:50.003 -08 000000102 INF: ======================================
17-02-28 20:10:50.004 -08 000000098 INF: ======================================
17-02-28 20:10:50.005 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:50.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:10:50.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:50.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:10:50.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:50.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:10:50.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:50.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:10:50.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:50.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827===================
17-02-28 20:10:50.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827===================
17-02-28 20:10:50.008 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:10:50.008 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:10:50.008 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:10:50.008 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827===================
17-02-28 20:10:50.031 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:10:50.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:10:50.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827===================
17-02-28 20:10:50.032 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:50.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827===================
17-02-28 20:10:50.032 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:10:50.032 -08 000000042 INF: Transformed XStagePosition from 83.56118 mm to 83.5384101141244 mm.
17-02-28 20:10:50.044 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5755178014524 mm.
17-02-28 20:10:50.045 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3755178014524 mm.
17-02-28 20:10:50.045 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4662678014524 mm.
17-02-28 20:10:50.047 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:50.047 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:10:50.047 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:50.047 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -101.9 um, section = F_1
17-02-28 20:10:50.071 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:50.072 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:50.075 -08 000000087 INF: ===================MoveEmissionFilters===================
17-02-28 20:10:50.076 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:10:50.076 -08 000000039 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:10:50.076 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:10:50.077 -08 000000069 INF: ===================Move X,Y, Parallel===================
17-02-28 20:10:50.077 -08 000000039 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:10:50.077 -08 000000039 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:10:50.077 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:10:50.077 -08 000000039 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:10:50.077 -08 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:10:50.078 -08 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:10:50.079 -08 000000039 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:10:50.079 -08 000000106 INF: ===================Move X Motor without settling===================
17-02-28 20:10:50.079 -08 000000081 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:10:50.079 -08 000000106 INF: X Motor: Xmit PR VM\n
17-02-28 20:10:50.080 -08 000000064 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:10:50.080 -08 000000081 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:10:50.080 -08 000000064 INF: ======================================
17-02-28 20:10:50.081 -08 000000062 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:10:50.082 -08 000000062 INF: ======================================
17-02-28 20:10:50.082 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:10:50.083 -08 000000100 INF: ===================Move Y Motor without settling===================
17-02-28 20:10:50.083 -08 000000100 INF: Y Motor: Moving to 64.5755 mm @25.000 mm/sec, started at 14.9269 mm
17-02-28 20:10:50.084 -08 000000100 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:10:50.084 -08 000000100 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:50.084 -08 000000105 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:10:50.084 -08 000000105 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:10:50.084 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:10:50.084 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:10:50.084 -08 000000105 INF: ======================================
17-02-28 20:10:50.085 -08 000000062 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:10:50.085 -08 000000062 INF: ======================================
17-02-28 20:10:50.085 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:50.086 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2103 Request: {"Cycle":2,"Lane":6,"Tile":2103,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF267","HCSMMF245","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.086 -08 000000105 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:10:50.086 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:10:50.087 -08 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:10:50.087 -08 000000105 INF: ======================================
17-02-28 20:10:50.087 -08 000000083 INF: ===================Camera Arm TDI===================
17-02-28 20:10:50.087 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:10:50.087 -08 000000064 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:10:50.087 -08 000000062 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:10:50.088 -08 000000109 INF: ======================================
17-02-28 20:10:50.088 -08 000000083 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:10:50.088 -08 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:10:50.089 -08 000000105 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:10:50.089 -08 000000062 INF: ======================================
17-02-28 20:10:50.089 -08 000000083 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:10:50.089 -08 000000105 INF: ======================================
17-02-28 20:10:50.090 -08 000000090 INF: ======================================
17-02-28 20:10:50.090 -08 000000032 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:10:50.090 -08 000000081 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:10:50.091 -08 000000032 INF: ======================================
17-02-28 20:10:50.092 -08 000000081 INF: ======================================
17-02-28 20:10:50.095 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:10:50.096 -08 000000047 INF: ======================================
17-02-28 20:10:50.098 -08 000000087 INF: ======================================
17-02-28 20:10:50.126 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2102 Request: {"Cycle":2,"Lane":6,"Tile":2102,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF177","HCSMMF263","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.127 -08 000000062 INF: FPGA: Recv ZSEL 
17-02-28 20:10:50.128 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:10:50.128 -08 000000064 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:10:50.129 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:10:50.129 -08 000000100 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:10:50.129 -08 000000100 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:50.129 -08 000000106 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:10:50.129 -08 000000106 INF: X Motor: Xmit PR VI\n
17-02-28 20:10:50.151 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2101 Request: {"Cycle":2,"Lane":6,"Tile":2101,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF251","HCSMMF205","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.165 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2104 Request: {"Cycle":2,"Lane":6,"Tile":2104,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF261","HCSMMF246","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.175 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2105 Request: {"Cycle":2,"Lane":6,"Tile":2105,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF200","HCSMMF213","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.188 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2108 Request: {"Cycle":2,"Lane":6,"Tile":2108,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF225","HCSMMF178","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.193 -08 000000074 INF: FPGA: Recv TDIBB
17-02-28 20:10:50.193 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:10:50.194 -08 000000106 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:10:50.194 -08 000000106 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:10:50.194 -08 000000106 INF: X Motor: Moving to 83.5384 mm @15.000 mm/sec, started at 82.4375 mm
17-02-28 20:10:50.194 -08 000000106 INF: X Motor: Xmit MA 10051\n
17-02-28 20:10:50.195 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:10:50.195 -08 000000100 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:50.195 -08 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:10:50.195 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:50.197 -08 000000064 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:10:50.197 -08 000000064 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:10:50.197 -08 000000064 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:10:50.243 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2109 Request: {"Cycle":2,"Lane":6,"Tile":2109,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF184","HCSMMF195","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.245 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2107 Request: {"Cycle":2,"Lane":6,"Tile":2107,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF196","HCSMMF230","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.246 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2112 Request: {"Cycle":2,"Lane":6,"Tile":2112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF276","HCSMMF208","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.247 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2110 Request: {"Cycle":2,"Lane":6,"Tile":2110,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF210","HCSMMF243","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.248 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2113 Request: {"Cycle":2,"Lane":6,"Tile":2113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF190","HCSMMF262","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.248 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2111 Request: {"Cycle":2,"Lane":6,"Tile":2111,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF212","HCSMMF272","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.249 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2106 Request: {"Cycle":2,"Lane":6,"Tile":2106,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF204","HCSMMF284","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.250 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2116 Request: {"Cycle":2,"Lane":6,"Tile":2116,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF189","HCSMMF257","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.251 -08 000000034 INF: FPGA: Recv ZSTEP 
17-02-28 20:10:50.251 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2114 Request: {"Cycle":2,"Lane":6,"Tile":2114,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF187","HCSMMF201","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.251 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:50.252 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2117 Request: {"Cycle":2,"Lane":6,"Tile":2117,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF176","HCSMMF231","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.252 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2115 Request: {"Cycle":2,"Lane":6,"Tile":2115,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF283","HCSMMF182","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.253 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:10:50.253 -08 000000100 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:50.253 -08 000000106 INF: X Motor: Recv MA 10051\r\n>
17-02-28 20:10:50.253 -08 000000100 INF: Y Motor: Set target position to 5957552 encoder counts
17-02-28 20:10:50.253 -08 000000100 INF: Y Motor: Xmit s r0xca 5957552\r
17-02-28 20:10:50.253 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2118 Request: {"Cycle":2,"Lane":6,"Tile":2118,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF215","HCSMMF211","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.253 -08 000000106 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:10:50.253 -08 000000064 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:10:50.254 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:50.254 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2120 Request: {"Cycle":2,"Lane":6,"Tile":2120,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF218","HCSMMF277","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.255 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2119 Request: {"Cycle":2,"Lane":6,"Tile":2119,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF219","HCSMMF286","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.255 -08 000000064 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:10:50.255 -08 000000064 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:10:50.255 -08 000000064 INF: Z Motor: Arming to move to -0.0619 mm
17-02-28 20:10:50.255 -08 000000064 INF: FPGA: Xmit ZYT 6437552 4\n
17-02-28 20:10:50.256 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2125 Request: {"Cycle":2,"Lane":6,"Tile":2125,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF217","HCSMMF282","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.257 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2121 Request: {"Cycle":2,"Lane":6,"Tile":2121,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF266","HCSMMF180","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.258 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2126 Request: {"Cycle":2,"Lane":6,"Tile":2126,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF203","HCSMMF233","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.259 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2124 Request: {"Cycle":2,"Lane":6,"Tile":2124,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF258","HCSMMF179","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.259 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2127 Request: {"Cycle":2,"Lane":6,"Tile":2127,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF280","HCSMMF253","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.261 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2122 Request: {"Cycle":2,"Lane":6,"Tile":2122,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF192","HCSMMF197","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.262 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2123 Request: {"Cycle":2,"Lane":6,"Tile":2123,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF264","HCSMMF228","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.264 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2128 Request: {"Cycle":2,"Lane":6,"Tile":2128,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF209","HCSMMF234","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:10:50.266 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:50.272 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:10:50.313 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:10:50.313 -08 000000064 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492685 enc / 14.927 mm / ) = 6437552 enc / 64.376 mm
17-02-28 20:10:50.313 -08 000000064 INF: FPGA: Xmit ZARM 16223\n
17-02-28 20:10:50.315 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:10:50.315 -08 000000100 INF: Y Motor: Start the move command
17-02-28 20:10:50.315 -08 000000100 INF: Y Motor: Xmit t 1\r
17-02-28 20:10:50.352 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:50.353 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:10:50.375 -08 000000109 INF: FPGA: Recv ZARM
17-02-28 20:10:50.375 -08 000000064 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9169 ms
17-02-28 20:10:50.375 -08 000000064 INF: Z Motor: ArmAbsStepped took 119.5892 ms
17-02-28 20:10:50.375 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:10:50.377 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:10:50.377 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:10:50.377 -08 000000100 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:10:50.377 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:50.378 -08 000000064 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:10:50.378 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:10:50.380 -08 000000064 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:10:50.380 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:10:50.381 -08 000000064 INF: ======================================
17-02-28 20:10:50.397 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:50.403 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:10:50.504 -08 000000100 INF: Y Motor: Unshifted Position: 1077765
17-02-28 20:10:50.554 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:50.562 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:50.568 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:10:50.668 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:50.673 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:10:50.678 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:50.681 -08 000000083 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:10:50.681 -08 000000083 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:10:50.681 -08 000000083 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:10:50.696 -08 000000083 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:10:50.698 -08 000000083 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:10:50.782 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:10:50.816 -08 000000100 INF: Y Motor: Unshifted Position: 1781016
17-02-28 20:10:50.866 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:50.877 -08 000000106 INF: X Motor: Xmit PR ER\n
17-02-28 20:10:50.942 -08 000000106 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:10:50.942 -08 000000106 INF: X Motor: Moved to 83.5386 after 689 ms
17-02-28 20:10:50.942 -08 000000106 INF: ======================================
17-02-28 20:10:50.992 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:51.063 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:10:51.128 -08 000000100 INF: Y Motor: Unshifted Position: 2566867
17-02-28 20:10:51.178 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:51.301 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:51.303 -08 000000083 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:10:51.303 -08 000000083 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:10:51.304 -08 000000083 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:10:51.319 -08 000000083 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:10:51.321 -08 000000083 INF: ===================Camera Arm TDI===================
17-02-28 20:10:51.322 -08 000000083 INF: ======================================
17-02-28 20:10:51.323 -08 000000039 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:10:51.325 -08 000000039 INF: ======================================
17-02-28 20:10:51.440 -08 000000100 INF: Y Motor: Unshifted Position: 3346805
17-02-28 20:10:51.490 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:51.614 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:51.750 -08 000000100 INF: Y Motor: Unshifted Position: 4121883
17-02-28 20:10:51.800 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:51.928 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:52.064 -08 000000100 INF: Y Motor: Unshifted Position: 4910168
17-02-28 20:10:52.114 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:52.238 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:52.376 -08 000000100 INF: Y Motor: Unshifted Position: 5686780
17-02-28 20:10:52.426 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:52.550 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:52.686 -08 000000100 INF: Y Motor: Unshifted Position: 5957554
17-02-28 20:10:52.686 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:10:52.686 -08 000000100 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:52.748 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:10:52.748 -08 000000100 INF: Y Motor: Moved to 64.5755 after 2371 ms
17-02-28 20:10:52.748 -08 000000100 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:10:52.814 -08 000000100 INF: Y Motor: Recv v 4096\r
17-02-28 20:10:52.814 -08 000000100 INF: Y Motor: Status After move finished OK:
17-02-28 20:10:52.814 -08 000000100 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:52.874 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:10:52.874 -08 000000100 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:52.874 -08 000000100 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:10:52.938 -08 000000100 INF: Y Motor: Recv v 402653184\r
17-02-28 20:10:52.938 -08 000000100 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:10:52.938 -08 000000100 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:10:52.938 -08 000000100 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:10:53.000 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:10:53.000 -08 000000100 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:10:53.000 -08 000000100 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:10:53.000 -08 000000100 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:53.062 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:10:53.062 -08 000000100 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:10:53.062 -08 000000100 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:53.124 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:10:53.124 -08 000000100 INF: ======================================
17-02-28 20:10:53.125 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:10:53.126 -08 000000069 INF: ======================================
17-02-28 20:10:53.127 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:10:53.128 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:53.128 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:10:53.128 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:10:53.186 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:10:53.186 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:10:53.245 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:10:53.245 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:10:53.246 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:53.246 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:10:53.310 -08 000000030 INF: FPGA: Recv TDIYERD 6457553
17-02-28 20:10:53.310 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457553 counts (64.576 mm)
17-02-28 20:10:53.310 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:53.311 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:53.312 -08 000000054 INF: ===================TDI FPGA Arm===================
17-02-28 20:10:53.312 -08 000000052 INF: ===================Set YMotor gains for scans===================
17-02-28 20:10:53.312 -08 000000052 INF: ======================================
17-02-28 20:10:53.312 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:10:53.313 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:10:53.313 -08 000000054 INF: FPGA: Xmit TDIYPOS 6346627\n
17-02-28 20:10:53.374 -08 000000083 INF: FPGA: Recv TDIYPOS
17-02-28 20:10:53.375 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:10:53.376 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:10:53.377 -08 000000054 INF: FPGA: Xmit TDIYARM3 139264 6437552 1 1\n
17-02-28 20:10:53.436 -08 000000047 INF: FPGA: Recv TDIYARM3
17-02-28 20:10:53.437 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:10:53.438 -08 000000054 INF: ===================TDI FPGA Arm===================
17-02-28 20:10:53.439 -08 000000054 INF: ======================================
17-02-28 20:10:53.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:10:53.441 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:10:53.441 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:53.442 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:53.442 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:53.443 -08 000000104 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:10:53.443 -08 000000069 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:10:53.443 -08 000000104 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:10:53.443 -08 000000104 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:10:53.443 -08 000000104 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:10:53.443 -08 000000069 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:10:53.443 -08 000000069 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:10:53.443 -08 000000069 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:10:53.443 -08 000000104 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:10:53.446 -08 000000069 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:10:53.807 -08 000000054 INF: FPGA: Recv EX2MV
17-02-28 20:10:53.807 -08 000000104 INF: Excitation Filter 2: Moved -107 steps in 363.7669 ms
17-02-28 20:10:53.807 -08 000000104 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 363.8851 ms
17-02-28 20:10:53.807 -08 000000104 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 363.9706 ms
17-02-28 20:10:53.807 -08 000000104 INF: ======================================
17-02-28 20:10:53.870 -08 000000100 INF: FPGA: Recv EX1MV
17-02-28 20:10:53.870 -08 000000069 INF: Excitation Filter 1: Moved -107 steps in 426.4894 ms
17-02-28 20:10:53.870 -08 000000069 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 426.6495 ms
17-02-28 20:10:53.870 -08 000000069 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 426.7566 ms
17-02-28 20:10:53.870 -08 000000069 INF: ======================================
17-02-28 20:10:53.871 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:53.872 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:10:53.873 -08 000000101 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:10:53.873 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:10:53.873 -08 000000081 INF: ===================FPGA Z Wait===================
17-02-28 20:10:53.873 -08 000000054 INF: ===================Move Y Motor without settling===================
17-02-28 20:10:53.874 -08 000000054 INF: Y Motor: Moving to 14.9272 mm @6.500 mm/sec, started at 64.5755 mm
17-02-28 20:10:53.874 -08 000000081 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:10:53.874 -08 000000054 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:10:53.874 -08 000000054 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:10:53.874 -08 000000101 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:10:53.874 -08 000000032 INF: ===================Camera TDI, Parallel===================
17-02-28 20:10:53.875 -08 000000109 INF: ===================Camera TDI===================
17-02-28 20:10:53.875 -08 000000102 INF: ===================Camera TDI===================
17-02-28 20:10:53.877 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:53.877 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:53.877 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:53.877 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:53.881 -08 000000101 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:10:53.936 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:10:53.936 -08 000000054 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:10:53.936 -08 000000054 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:10:53.998 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:10:53.998 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:10:54.027 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:54.027 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:54.027 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:54.027 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:54.060 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:10:54.060 -08 000000054 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:10:54.060 -08 000000054 INF: Y Motor: Set target position to 992718 encoder counts
17-02-28 20:10:54.060 -08 000000054 INF: Y Motor: Xmit s r0xca 992718\r
17-02-28 20:10:54.122 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:10:54.122 -08 000000054 INF: Y Motor: Start the move command
17-02-28 20:10:54.122 -08 000000054 INF: Y Motor: Xmit t 1\r
17-02-28 20:10:54.177 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:54.177 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:54.177 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:10:54.177 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:10:54.184 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:10:54.184 -08 000000054 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:10:54.184 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:54.244 -08 000000085 INF: FPGA: Recv ZWAIT 
17-02-28 20:10:54.245 -08 000000081 INF: ======================================
17-02-28 20:10:54.308 -08 000000054 INF: Y Motor: Unshifted Position: 5895700
17-02-28 20:10:54.327 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:10:54.327 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:10:54.327 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:10:54.327 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:10:54.327 -08 000000109 INF: ===================Camera #0 Frame #5===================
17-02-28 20:10:54.327 -08 000000102 INF: ===================Camera #2 Frame #5===================
17-02-28 20:10:54.358 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:54.483 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:54.492 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:10:54.492 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:10:54.492 -08 000000109 INF: ===================Camera #0 Frame #11===================
17-02-28 20:10:54.493 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:10:54.493 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:10:54.493 -08 000000102 INF: ===================Camera #2 Frame #11===================
17-02-28 20:10:54.622 -08 000000054 INF: Y Motor: Unshifted Position: 5690303
17-02-28 20:10:54.660 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:10:54.660 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:10:54.660 -08 000000109 INF: ===================Camera #0 Frame #17===================
17-02-28 20:10:54.662 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:10:54.662 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:10:54.662 -08 000000102 INF: ===================Camera #2 Frame #17===================
17-02-28 20:10:54.672 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:54.796 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:54.828 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:10:54.828 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:10:54.828 -08 000000109 INF: ===================Camera #0 Frame #23===================
17-02-28 20:10:54.831 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:10:54.831 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:10:54.831 -08 000000102 INF: ===================Camera #2 Frame #23===================
17-02-28 20:10:54.933 -08 000000054 INF: Y Motor: Unshifted Position: 5489888
17-02-28 20:10:54.983 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:54.996 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:10:54.996 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:10:54.996 -08 000000109 INF: ===================Camera #0 Frame #29===================
17-02-28 20:10:55.000 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:10:55.000 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:10:55.000 -08 000000102 INF: ===================Camera #2 Frame #29===================
17-02-28 20:10:55.110 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:55.164 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:10:55.164 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:10:55.164 -08 000000109 INF: ===================Camera #0 Frame #35===================
17-02-28 20:10:55.169 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:10:55.169 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:10:55.169 -08 000000102 INF: ===================Camera #2 Frame #36===================
17-02-28 20:10:55.246 -08 000000054 INF: Y Motor: Unshifted Position: 5285785
17-02-28 20:10:55.296 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:55.332 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:10:55.332 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:10:55.332 -08 000000109 INF: ===================Camera #0 Frame #42===================
17-02-28 20:10:55.341 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:10:55.341 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:10:55.341 -08 000000102 INF: ===================Camera #2 Frame #42===================
17-02-28 20:10:55.421 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:55.503 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:10:55.503 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:10:55.503 -08 000000109 INF: ===================Camera #0 Frame #48===================
17-02-28 20:10:55.510 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:10:55.510 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:10:55.510 -08 000000102 INF: ===================Camera #2 Frame #48===================
17-02-28 20:10:55.561 -08 000000054 INF: Y Motor: Unshifted Position: 5082761
17-02-28 20:10:55.611 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:55.671 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:10:55.671 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:10:55.671 -08 000000109 INF: ===================Camera #0 Frame #54===================
17-02-28 20:10:55.679 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:10:55.679 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:10:55.679 -08 000000102 INF: ===================Camera #2 Frame #54===================
17-02-28 20:10:55.732 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:55.841 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:10:55.841 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:10:55.841 -08 000000109 INF: ===================Camera #0 Frame #60===================
17-02-28 20:10:55.849 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:10:55.849 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:10:55.849 -08 000000102 INF: ===================Camera #2 Frame #61===================
17-02-28 20:10:55.868 -08 000000054 INF: Y Motor: Unshifted Position: 4881049
17-02-28 20:10:55.918 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:56.011 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:10:56.011 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:10:56.011 -08 000000109 INF: ===================Camera #0 Frame #67===================
17-02-28 20:10:56.023 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:10:56.023 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:10:56.023 -08 000000102 INF: ===================Camera #2 Frame #67===================
17-02-28 20:10:56.043 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:56.182 -08 000000054 INF: Y Motor: Unshifted Position: 4676952
17-02-28 20:10:56.184 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:10:56.184 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:10:56.184 -08 000000109 INF: ===================Camera #0 Frame #73===================
17-02-28 20:10:56.193 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:10:56.193 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:10:56.193 -08 000000102 INF: ===================Camera #2 Frame #73===================
17-02-28 20:10:56.233 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:56.276 -08 000000098 INF: RunCopyService queue size at 2/28/2017 8:10:56 PM is 2
17-02-28 20:10:56.354 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:10:56.354 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:10:56.354 -08 000000109 INF: ===================Camera #0 Frame #79===================
17-02-28 20:10:56.356 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:56.365 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:10:56.365 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:10:56.365 -08 000000102 INF: ===================Camera #2 Frame #80===================
17-02-28 20:10:56.495 -08 000000054 INF: Y Motor: Unshifted Position: 4473920
17-02-28 20:10:56.523 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:10:56.523 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:10:56.523 -08 000000109 INF: ===================Camera #0 Frame #85===================
17-02-28 20:10:56.539 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:10:56.539 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:10:56.539 -08 000000102 INF: ===================Camera #2 Frame #86===================
17-02-28 20:10:56.545 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:56.669 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:56.693 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:10:56.693 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:10:56.693 -08 000000109 INF: ===================Camera #0 Frame #92===================
17-02-28 20:10:56.710 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:10:56.710 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:10:56.710 -08 000000102 INF: ===================Camera #2 Frame #92===================
17-02-28 20:10:56.807 -08 000000054 INF: Y Motor: Unshifted Position: 4272208
17-02-28 20:10:56.857 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:56.866 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:10:56.866 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:10:56.866 -08 000000109 INF: ===================Camera #0 Frame #98===================
17-02-28 20:10:56.881 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:10:56.881 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:10:56.881 -08 000000102 INF: ===================Camera #2 Frame #99===================
17-02-28 20:10:56.982 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:57.036 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:10:57.036 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:10:57.036 -08 000000109 INF: ===================Camera #0 Frame #104===================
17-02-28 20:10:57.055 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:10:57.055 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:10:57.055 -08 000000102 INF: ===================Camera #2 Frame #105===================
17-02-28 20:10:57.118 -08 000000054 INF: Y Motor: Unshifted Position: 4067448
17-02-28 20:10:57.168 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:57.206 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:10:57.206 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:10:57.206 -08 000000109 INF: ===================Camera #0 Frame #110===================
17-02-28 20:10:57.225 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:10:57.225 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:10:57.225 -08 000000102 INF: ===================Camera #2 Frame #111===================
17-02-28 20:10:57.292 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:57.375 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:10:57.375 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:10:57.375 -08 000000109 INF: ===================Camera #0 Frame #117===================
17-02-28 20:10:57.396 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:10:57.396 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:10:57.396 -08 000000102 INF: ===================Camera #2 Frame #117===================
17-02-28 20:10:57.429 -08 000000054 INF: Y Motor: Unshifted Position: 3866605
17-02-28 20:10:57.479 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:57.548 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:10:57.548 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:10:57.548 -08 000000109 INF: ===================Camera #0 Frame #123===================
17-02-28 20:10:57.567 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:10:57.567 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:10:57.567 -08 000000102 INF: ===================Camera #2 Frame #124===================
17-02-28 20:10:57.606 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:57.717 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:10:57.717 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:10:57.717 -08 000000109 INF: ===================Camera #0 Frame #129===================
17-02-28 20:10:57.741 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:10:57.741 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:10:57.741 -08 000000102 INF: ===================Camera #2 Frame #130===================
17-02-28 20:10:57.744 -08 000000054 INF: Y Motor: Unshifted Position: 3662936
17-02-28 20:10:57.794 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:57.887 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:10:57.887 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:10:57.887 -08 000000109 INF: ===================Camera #0 Frame #136===================
17-02-28 20:10:57.911 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:10:57.911 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:10:57.911 -08 000000102 INF: ===================Camera #2 Frame #136===================
17-02-28 20:10:57.916 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:58.055 -08 000000054 INF: Y Motor: Unshifted Position: 3459488
17-02-28 20:10:58.060 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:10:58.060 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:10:58.060 -08 000000109 INF: ===================Camera #0 Frame #142===================
17-02-28 20:10:58.082 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:10:58.082 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:10:58.082 -08 000000102 INF: ===================Camera #2 Frame #143===================
17-02-28 20:10:58.105 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:58.229 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:58.230 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:10:58.230 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:10:58.230 -08 000000109 INF: ===================Camera #0 Frame #148===================
17-02-28 20:10:58.256 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:10:58.256 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:10:58.256 -08 000000102 INF: ===================Camera #2 Frame #149===================
17-02-28 20:10:58.366 -08 000000054 INF: Y Motor: Unshifted Position: 3257770
17-02-28 20:10:58.400 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:10:58.400 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:10:58.400 -08 000000109 INF: ===================Camera #0 Frame #154===================
17-02-28 20:10:58.416 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:58.427 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:10:58.427 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:10:58.427 -08 000000102 INF: ===================Camera #2 Frame #155===================
17-02-28 20:10:58.542 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:58.570 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:10:58.570 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:10:58.570 -08 000000109 INF: ===================Camera #0 Frame #161===================
17-02-28 20:10:58.598 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:10:58.598 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:10:58.598 -08 000000102 INF: ===================Camera #2 Frame #162===================
17-02-28 20:10:58.679 -08 000000054 INF: Y Motor: Unshifted Position: 3053674
17-02-28 20:10:58.729 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:58.743 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:10:58.743 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:10:58.743 -08 000000109 INF: ===================Camera #0 Frame #167===================
17-02-28 20:10:58.773 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:10:58.773 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:10:58.773 -08 000000102 INF: ===================Camera #2 Frame #168===================
17-02-28 20:10:58.852 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:58.920 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:10:58.920 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:10:58.921 -08 000000109 INF: ===================Camera #0 Frame #174===================
17-02-28 20:10:58.944 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:10:58.944 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:10:58.944 -08 000000102 INF: ===================Camera #2 Frame #174===================
17-02-28 20:10:58.991 -08 000000054 INF: Y Motor: Unshifted Position: 2850882
17-02-28 20:10:59.041 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:59.095 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:10:59.095 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:10:59.095 -08 000000109 INF: ===================Camera #0 Frame #180===================
17-02-28 20:10:59.115 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:10:59.115 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:10:59.115 -08 000000102 INF: ===================Camera #2 Frame #181===================
17-02-28 20:10:59.166 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:59.264 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:10:59.264 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:10:59.264 -08 000000109 INF: ===================Camera #0 Frame #186===================
17-02-28 20:10:59.289 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:10:59.289 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:10:59.289 -08 000000102 INF: ===================Camera #2 Frame #187===================
17-02-28 20:10:59.301 -08 000000054 INF: Y Motor: Unshifted Position: 2649166
17-02-28 20:10:59.351 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:59.433 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:10:59.433 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:10:59.433 -08 000000109 INF: ===================Camera #0 Frame #192===================
17-02-28 20:10:59.460 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:10:59.460 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:10:59.460 -08 000000102 INF: ===================Camera #2 Frame #193===================
17-02-28 20:10:59.478 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:59.602 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:10:59.602 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:10:59.602 -08 000000109 INF: ===================Camera #0 Frame #199===================
17-02-28 20:10:59.615 -08 000000054 INF: Y Motor: Unshifted Position: 2444852
17-02-28 20:10:59.631 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:10:59.631 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:10:59.631 -08 000000102 INF: ===================Camera #2 Frame #200===================
17-02-28 20:10:59.665 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:59.774 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:10:59.774 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:10:59.774 -08 000000109 INF: ===================Camera #0 Frame #205===================
17-02-28 20:10:59.789 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:59.805 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:10:59.805 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:10:59.805 -08 000000102 INF: ===================Camera #2 Frame #206===================
17-02-28 20:10:59.925 -08 000000054 INF: Y Motor: Unshifted Position: 2243356
17-02-28 20:10:59.943 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:10:59.943 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:10:59.943 -08 000000109 INF: ===================Camera #0 Frame #211===================
17-02-28 20:10:59.975 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:10:59.976 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:10:59.976 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:10:59.976 -08 000000102 INF: ===================Camera #2 Frame #212===================
17-02-28 20:11:00.102 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:00.112 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:11:00.112 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:11:00.112 -08 000000109 INF: ===================Camera #0 Frame #217===================
17-02-28 20:11:00.147 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:11:00.147 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:11:00.147 -08 000000102 INF: ===================Camera #2 Frame #219===================
17-02-28 20:11:00.238 -08 000000054 INF: Y Motor: Unshifted Position: 2039687
17-02-28 20:11:00.282 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:11:00.282 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:11:00.282 -08 000000109 INF: ===================Camera #0 Frame #224===================
17-02-28 20:11:00.288 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:00.322 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:11:00.322 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:11:00.322 -08 000000102 INF: ===================Camera #2 Frame #225===================
17-02-28 20:11:00.413 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:00.455 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:11:00.455 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:11:00.455 -08 000000109 INF: ===================Camera #0 Frame #230===================
17-02-28 20:11:00.493 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:11:00.493 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:11:00.493 -08 000000102 INF: ===================Camera #2 Frame #232===================
17-02-28 20:11:00.551 -08 000000054 INF: Y Motor: Unshifted Position: 1838189
17-02-28 20:11:00.601 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:00.625 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:11:00.625 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:11:00.625 -08 000000109 INF: ===================Camera #0 Frame #236===================
17-02-28 20:11:00.667 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:11:00.667 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:11:00.667 -08 000000102 INF: ===================Camera #2 Frame #238===================
17-02-28 20:11:00.725 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:00.793 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:11:00.793 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:11:00.793 -08 000000109 INF: ===================Camera #0 Frame #243===================
17-02-28 20:11:00.838 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:11:00.838 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:11:00.838 -08 000000102 INF: ===================Camera #2 Frame #244===================
17-02-28 20:11:00.863 -08 000000054 INF: Y Motor: Unshifted Position: 1634516
17-02-28 20:11:00.913 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:00.964 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:11:00.964 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:11:00.964 -08 000000109 INF: ===================Camera #0 Frame #249===================
17-02-28 20:11:01.009 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:11:01.009 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:11:01.009 -08 000000102 INF: ===================Camera #2 Frame #251===================
17-02-28 20:11:01.038 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:01.134 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:11:01.134 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:11:01.134 -08 000000109 INF: ===================Camera #0 Frame #255===================
17-02-28 20:11:01.174 -08 000000054 INF: Y Motor: Unshifted Position: 1431065
17-02-28 20:11:01.183 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:11:01.183 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:11:01.183 -08 000000102 INF: ===================Camera #2 Frame #257===================
17-02-28 20:11:01.224 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:01.304 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:11:01.304 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:11:01.304 -08 000000109 INF: ===================Camera #0 Frame #261===================
17-02-28 20:11:01.348 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:01.354 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:11:01.354 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:11:01.354 -08 000000102 INF: ===================Camera #2 Frame #263===================
17-02-28 20:11:01.473 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:11:01.473 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:11:01.473 -08 000000109 INF: ===================Camera #0 Frame #268===================
17-02-28 20:11:01.487 -08 000000054 INF: Y Motor: Unshifted Position: 1229331
17-02-28 20:11:01.525 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:11:01.525 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:11:01.525 -08 000000102 INF: ===================Camera #2 Frame #270===================
17-02-28 20:11:01.537 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:01.609 -08 000000010 INF: FPGA: Recv TDIYWAIT
17-02-28 20:11:01.609 -08 000000101 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:01.611 -08 000000101 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:11:01.612 -08 000000053 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:11:01.612 -08 000000087 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:11:01.612 -08 000000053 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:11:01.612 -08 000000053 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:11:01.612 -08 000000053 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:11:01.612 -08 000000053 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:11:01.612 -08 000000087 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:11:01.612 -08 000000087 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:11:01.612 -08 000000087 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:11:01.613 -08 000000087 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:11:01.646 -08 000000109 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:11:01.646 -08 000000109 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:11:01.646 -08 000000109 INF: ===================Camera #0 Frame #272===================
17-02-28 20:11:01.659 -08 000000109 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:11:01.660 -08 000000109 INF: ===================CameraTDI Cleanup===================
17-02-28 20:11:01.661 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:01.792 -08 000000109 INF: Camera #0 ReleaseBuffer
17-02-28 20:11:01.792 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:11:01.792 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:11:01.792 -08 000000102 INF: ===================Camera #2 Frame #272===================
17-02-28 20:11:01.792 -08 000000109 INF: ===================Camera TDI===================
17-02-28 20:11:01.797 -08 000000054 INF: Y Motor: Unshifted Position: 1025888
17-02-28 20:11:01.798 -08 000000102 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:11:01.799 -08 000000102 INF: ===================CameraTDI Cleanup===================
17-02-28 20:11:01.822 -08 000000109 INF: ======================================
17-02-28 20:11:01.847 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:01.969 -08 000000102 INF: Camera #2 ReleaseBuffer
17-02-28 20:11:01.969 -08 000000102 INF: ===================Camera TDI===================
17-02-28 20:11:01.984 -08 000000105 INF: FPGA: Recv EX1MV
17-02-28 20:11:01.984 -08 000000105 INF: FPGA: Recv EX2MV
17-02-28 20:11:01.984 -08 000000053 INF: Excitation Filter 1: Moved 107 steps in 371.8246 ms
17-02-28 20:11:01.984 -08 000000087 INF: Excitation Filter 2: Moved 107 steps in 371.6694 ms
17-02-28 20:11:01.984 -08 000000053 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.9302 ms
17-02-28 20:11:01.984 -08 000000053 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.0431 ms
17-02-28 20:11:01.984 -08 000000087 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8037 ms
17-02-28 20:11:01.984 -08 000000087 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.9777 ms
17-02-28 20:11:01.984 -08 000000053 INF: ======================================
17-02-28 20:11:01.985 -08 000000087 INF: ======================================
17-02-28 20:11:01.986 -08 000000054 INF: Y Motor: Unshifted Position: 992718
17-02-28 20:11:01.986 -08 000000101 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:01.986 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:11:01.986 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:01.987 -08 000000101 INF: ======================================
17-02-28 20:11:02.003 -08 000000102 INF: ======================================
17-02-28 20:11:02.004 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:11:02.005 -08 000000032 INF: ======================================
17-02-28 20:11:02.048 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:11:02.048 -08 000000054 INF: Y Motor: Moved to 14.9272 after 7863 ms
17-02-28 20:11:02.048 -08 000000054 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:11:02.110 -08 000000054 INF: Y Motor: Recv v 4097\r
17-02-28 20:11:02.110 -08 000000054 INF: Y Motor: Status After move finished OK:
17-02-28 20:11:02.110 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:02.171 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:11:02.171 -08 000000054 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:02.171 -08 000000054 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:11:02.236 -08 000000054 INF: Y Motor: Recv v 134217728\r
17-02-28 20:11:02.236 -08 000000054 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:11:02.236 -08 000000054 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:11:02.236 -08 000000054 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:11:02.298 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:11:02.298 -08 000000054 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:11:02.298 -08 000000054 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:11:02.298 -08 000000054 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:02.358 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:11:02.358 -08 000000054 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:11:02.358 -08 000000054 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:02.423 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:11:02.423 -08 000000054 INF: ======================================
17-02-28 20:11:02.424 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:02.425 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:02.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:02.426 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:11:02.483 -08 000000091 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:11:02.483 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:11:02.545 -08 000000045 INF: FPGA: Recv TDIYERD 1492720
17-02-28 20:11:02.545 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:11:02.607 -08 000000101 INF: FPGA: Recv ZADCR 21804
17-02-28 20:11:02.607 -08 000000042 INF: At scan end Y pos = 14.927 and Z pos = -0.084. Y moved -48.539 mm
17-02-28 20:11:02.607 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:11:02.669 -08 000000106 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:11:02.669 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:11:02.669 -08 000000042 INF: TDIScan finished after 12636.067 ms
17-02-28 20:11:02.669 -08 000000042 INF: Image[0]: Y should trigger at 63.466 mm, 2nd row was at 64.375 mm (error = 0.909 mm)
17-02-28 20:11:02.669 -08 000000042 INF: Image[2]: Y should trigger at 63.466 mm, 2nd row was at 64.375 mm (error = 0.909 mm)
17-02-28 20:11:02.671 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:02.705 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.574 um
17-02-28 20:11:02.706 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:02.707 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:11:02.731 -08 000000090 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:11:02.731 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:02.732 -08 000000030 INF: ===================Dither Clean Up Command===================
17-02-28 20:11:02.732 -08 000000076 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:11:02.732 -08 000000010 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:11:02.732 -08 000000066 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:11:02.733 -08 000000066 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:11:02.733 -08 000000076 INF: ======================================
17-02-28 20:11:02.733 -08 000000066 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:11:02.733 -08 000000010 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:11:02.733 -08 000000010 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:11:02.733 -08 000000054 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:11:02.733 -08 000000084 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:11:02.733 -08 000000084 INF: ======================================
17-02-28 20:11:02.734 -08 000000054 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:11:02.793 -08 000000106 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:02.793 -08 000000106 INF: FPGA: Recv ZSEL 
17-02-28 20:11:02.793 -08 000000054 INF: FPGA: Xmit ZDACW 26708\n
17-02-28 20:11:02.793 -08 000000066 INF: ======================================
17-02-28 20:11:02.795 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:11:02.795 -08 000000010 INF: ======================================
17-02-28 20:11:02.858 -08 000000055 INF: FPGA: Recv ZDACW 
17-02-28 20:11:02.858 -08 000000054 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:11:02.859 -08 000000054 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:11:02.920 -08 000000098 INF: FPGA: Recv TDIBB
17-02-28 20:11:02.920 -08 000000054 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:11:02.921 -08 000000054 INF: ======================================
17-02-28 20:11:02.922 -08 000000030 INF: ======================================
17-02-28 20:11:02.923 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:02.924 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:11:02.924 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:02.924 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:11:02.924 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:02.925 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:11:02.925 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:02.925 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:11:02.925 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:02.925 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827===================
17-02-28 20:11:02.925 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827===================
17-02-28 20:11:02.926 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:11:02.926 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:11:02.926 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:11:02.926 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827===================
17-02-28 20:11:02.949 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:11:02.949 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:11:02.950 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:02.950 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:11:02.950 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:11:02.950 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:11:02.951 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface===================
17-02-28 20:11:02.967 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:02.968 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:02.968 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:11:02.969 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:11:02.969 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:11:02.970 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:11:02.970 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:11:02.970 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:11:02.971 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:11:02.971 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:02.995 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2201 Request: {"Cycle":2,"Lane":6,"Tile":2201,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF271","HCSMMF204","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.021 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:11:03.022 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Selecting Reagent HSM (3)===================
17-02-28 20:11:03.022 -08 000000018 INF: Valve A1: Go to position 3
17-02-28 20:11:03.022 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:11:03.054 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2210 Request: {"Cycle":2,"Lane":6,"Tile":2210,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF231","HCSMMF237","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.065 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:11:03.066 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:03.066 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:11:03.067 -08 000000042 INF: Lane 7, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:11:03.067 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:03.068 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:03.072 -08 000000105 INF: ===================Move Tilt Motor 1===================
17-02-28 20:11:03.073 -08 000000105 INF: ======================================
17-02-28 20:11:03.074 -08 000000105 INF: ===================Move Tilt Motor 2===================
17-02-28 20:11:03.074 -08 000000105 INF: ======================================
17-02-28 20:11:03.074 -08 000000032 INF: ===================Move Tilt Motor 3===================
17-02-28 20:11:03.075 -08 000000032 INF: ======================================
17-02-28 20:11:03.075 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:03.076 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:03.084 -08 000000042 INF: Transformed XStagePosition from 85.77563 mm to 85.775634765625 mm.
17-02-28 20:11:03.087 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 8\r
17-02-28 20:11:03.087 -08 000000018 INF: Valve A1: 228.300 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:11:03.087 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 8 to 3
17-02-28 20:11:03.087 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW3\r
17-02-28 20:11:03.088 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:11:03.088 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:11:03.094 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:11:03.094 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:11:03.094 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:11:03.095 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:11:03.095 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:11:03.100 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:11:03.100 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:11:03.100 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:11:03.104 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2204 Request: {"Cycle":2,"Lane":6,"Tile":2204,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF197","HCSMMF229","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.203 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2209 Request: {"Cycle":2,"Lane":6,"Tile":2209,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF241","HCSMMF244","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.203 -08 000000062 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:03.205 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:11:03.205 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:11:03.205 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1019 mm
17-02-28 20:11:03.206 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:11:03.206 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2203 Request: {"Cycle":2,"Lane":6,"Tile":2203,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF236","HCSMMF181","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.210 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2213 Request: {"Cycle":2,"Lane":6,"Tile":2213,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF239","HCSMMF203","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.213 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2206 Request: {"Cycle":2,"Lane":6,"Tile":2206,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF234","HCSMMF247","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.215 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2207 Request: {"Cycle":2,"Lane":6,"Tile":2207,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF264","HCSMMF182","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.216 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2208 Request: {"Cycle":2,"Lane":6,"Tile":2208,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF250","HCSMMF286","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.218 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2202 Request: {"Cycle":2,"Lane":6,"Tile":2202,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF214","HCSMMF226","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.219 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2212 Request: {"Cycle":2,"Lane":6,"Tile":2212,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF178","HCSMMF259","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.221 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2205 Request: {"Cycle":2,"Lane":6,"Tile":2205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF192","HCSMMF249","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.222 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2218 Request: {"Cycle":2,"Lane":6,"Tile":2218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF258","HCSMMF189","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.223 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2216 Request: {"Cycle":2,"Lane":6,"Tile":2216,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF248","HCSMMF216","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.224 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2211 Request: {"Cycle":2,"Lane":6,"Tile":2211,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF276","HCSMMF227","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.225 -08 000000110 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2214 Request: {"Cycle":2,"Lane":6,"Tile":2214,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF254","HCSMMF279","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.226 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2215 Request: {"Cycle":2,"Lane":6,"Tile":2215,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF233","HCSMMF223","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.227 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2219 Request: {"Cycle":2,"Lane":6,"Tile":2219,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF242","HCSMMF196","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.227 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2217 Request: {"Cycle":2,"Lane":6,"Tile":2217,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF184","HCSMMF266","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.228 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2221 Request: {"Cycle":2,"Lane":6,"Tile":2221,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF230","HCSMMF191","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.230 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2223 Request: {"Cycle":2,"Lane":6,"Tile":2223,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF243","HCSMMF235","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.231 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2222 Request: {"Cycle":2,"Lane":6,"Tile":2222,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF217","HCSMMF213","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.232 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2220 Request: {"Cycle":2,"Lane":6,"Tile":2220,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF206","HCSMMF200","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.233 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2224 Request: {"Cycle":2,"Lane":6,"Tile":2224,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF194","HCSMMF210","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.235 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2227 Request: {"Cycle":2,"Lane":6,"Tile":2227,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF218","HCSMMF221","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.240 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2228 Request: {"Cycle":2,"Lane":6,"Tile":2228,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF251","HCSMMF269","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.246 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2225 Request: {"Cycle":2,"Lane":6,"Tile":2225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF274","HCSMMF285","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.249 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 2 Tile: 2226 Request: {"Cycle":2,"Lane":6,"Tile":2226,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF183","HCSMMF232","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:03.252 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:03.258 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:11:03.262 -08 000000039 INF: FPGA: Recv ZTRG 
17-02-28 20:11:03.262 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:11:03.324 -08 000000053 INF: FPGA: Recv ZYT 
17-02-28 20:11:03.324 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:11:03.324 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:11:03.355 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:03.355 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:11:03.386 -08 000000085 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:11:03.386 -08 000000085 INF: FPGA: Recv ZMV 
17-02-28 20:11:03.386 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:11:03.386 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.0013 ms
17-02-28 20:11:03.386 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:11:03.394 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:03.400 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:11:03.448 -08 000000030 INF: FPGA: Recv ZDACR 60292
17-02-28 20:11:03.448 -08 000000042 INF: Z Motor: MoveAndTrigger took 242.6844 ms w/comms
17-02-28 20:11:03.448 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:11:03.448 -08 000000042 INF: Z Motor: MoveAbsStepped took 242.8562 ms
17-02-28 20:11:03.449 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:11:03.450 -08 000000042 INF: Transformed XStagePosition from 85.77563 mm to 85.775634765625 mm.
17-02-28 20:11:03.459 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:11:03.459 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:11:03.459 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:11:03.459 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:11:03.459 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:11:03.504 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:03.510 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:11:03.513 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:03.524 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:11:03.524 -08 000000042 INF: Transformed XStagePosition from 85.77563 mm to 85.775634765625 mm.
17-02-28 20:11:03.533 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:11:03.533 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:11:03.533 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:11:03.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:03.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:11:03.536 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:03.536 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = G_1
17-02-28 20:11:03.536 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:03.537 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:03.537 -08 000000090 INF: ===================MoveEmissionFilters===================
17-02-28 20:11:03.537 -08 000000102 INF: ===================Move X,Y===================
17-02-28 20:11:03.538 -08 000000104 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:11:03.538 -08 000000100 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:11:03.538 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:11:03.539 -08 000000102 INF: ===================Move X,Y, Parallel===================
17-02-28 20:11:03.539 -08 000000104 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:11:03.539 -08 000000100 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:11:03.539 -08 000000081 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:11:03.539 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:11:03.539 -08 000000066 INF: ===================Move X Motor without settling===================
17-02-28 20:11:03.540 -08 000000087 INF: ===================Move Y Motor without settling===================
17-02-28 20:11:03.540 -08 000000087 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9272 mm
17-02-28 20:11:03.540 -08 000000087 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:11:03.540 -08 000000087 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:03.540 -08 000000058 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:11:03.540 -08 000000109 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:11:03.540 -08 000000010 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:11:03.540 -08 000000106 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:11:03.540 -08 000000081 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:11:03.540 -08 000000062 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:11:03.541 -08 000000010 INF: ======================================
17-02-28 20:11:03.541 -08 000000062 INF: ======================================
17-02-28 20:11:03.541 -08 000000109 INF: ======================================
17-02-28 20:11:03.541 -08 000000052 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:11:03.541 -08 000000058 INF: ======================================
17-02-28 20:11:03.542 -08 000000054 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:11:03.542 -08 000000052 INF: ======================================
17-02-28 20:11:03.542 -08 000000064 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:11:03.542 -08 000000064 INF: ======================================
17-02-28 20:11:03.542 -08 000000054 INF: ======================================
17-02-28 20:11:03.542 -08 000000066 INF: X Motor: Xmit PR VM\n
17-02-28 20:11:03.543 -08 000000104 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:11:03.543 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:11:03.543 -08 000000106 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:11:03.543 -08 000000106 INF: ======================================
17-02-28 20:11:03.544 -08 000000081 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:11:03.544 -08 000000104 INF: ======================================
17-02-28 20:11:03.544 -08 000000051 INF: ======================================
17-02-28 20:11:03.545 -08 000000100 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:11:03.545 -08 000000081 INF: ======================================
17-02-28 20:11:03.546 -08 000000100 INF: ======================================
17-02-28 20:11:03.547 -08 000000090 INF: ======================================
17-02-28 20:11:03.577 -08 000000066 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:11:03.577 -08 000000066 INF: X Motor: Xmit PR VI\n
17-02-28 20:11:03.577 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:11:03.577 -08 000000087 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:11:03.577 -08 000000087 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:03.609 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:03.615 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:11:03.639 -08 000000066 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:11:03.639 -08 000000066 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:11:03.639 -08 000000066 INF: X Motor: Moving to 85.7756 mm @15.000 mm/sec, started at 83.5386 mm
17-02-28 20:11:03.639 -08 000000066 INF: X Motor: Xmit MA 10967\n
17-02-28 20:11:03.640 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:11:03.640 -08 000000087 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:03.700 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 3\r
17-02-28 20:11:03.700 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:11:03.700 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Opening shutoff valve===================
17-02-28 20:11:03.701 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:11:03.701 -08 000000087 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:03.701 -08 000000066 INF: X Motor: Recv MA 10967\r\n>
17-02-28 20:11:03.701 -08 000000087 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:11:03.701 -08 000000087 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:11:03.701 -08 000000066 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:11:03.715 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:03.764 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:11:03.764 -08 000000087 INF: Y Motor: Start the move command
17-02-28 20:11:03.764 -08 000000087 INF: Y Motor: Xmit t 1\r
17-02-28 20:11:03.825 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:11:03.825 -08 000000087 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:11:03.825 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:03.952 -08 000000087 INF: Y Motor: Unshifted Position: 1072960
17-02-28 20:11:03.995 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:11:04.002 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:04.126 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:04.260 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:11:04.261 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:11:04.263 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:04.264 -08 000000087 INF: Y Motor: Unshifted Position: 1784377
17-02-28 20:11:04.314 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:04.323 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:11:04.324 -08 000000066 INF: X Motor: Xmit PR ER\n
17-02-28 20:11:04.331 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 3, aspirate port PortB, aspiration rate 250, dispense rate 2000, volume 70, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=3, Children=0, Thread="Run", Parent="Prepare for scanning", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:11:04.386 -08 000000066 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:11:04.386 -08 000000066 INF: X Motor: Moved to 85.7749 after 685 ms
17-02-28 20:11:04.386 -08 000000066 INF: ======================================
17-02-28 20:11:04.423 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:11:04.436 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:04.512 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:11:04.512 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:11:04.575 -08 000000087 INF: Y Motor: Unshifted Position: 2562739
17-02-28 20:11:04.612 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:11:04.625 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:04.636 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:04.736 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:04.749 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:04.822 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:04.885 -08 000000087 INF: Y Motor: Unshifted Position: 3337677
17-02-28 20:11:04.935 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:05.060 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:05.072 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:05.136 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:11:05.199 -08 000000087 INF: Y Motor: Unshifted Position: 4123586
17-02-28 20:11:05.236 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:11:05.249 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:05.322 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:05.373 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:05.422 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:05.508 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:11:05.508 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Aspirating port PortB===================
17-02-28 20:11:05.509 -08 000000087 INF: Y Motor: Unshifted Position: 4898525
17-02-28 20:11:05.559 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:05.608 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP13440R\r
17-02-28 20:11:05.686 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:05.697 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:05.797 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:05.821 -08 000000087 INF: Y Motor: Unshifted Position: 5677989
17-02-28 20:11:05.871 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:05.885 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:05.998 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:06.133 -08 000000087 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:11:06.133 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:11:06.133 -08 000000087 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:06.135 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:06.195 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:06.196 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:11:06.196 -08 000000087 INF: Y Motor: Moved to 64.5335 after 2371 ms
17-02-28 20:11:06.196 -08 000000087 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:11:06.259 -08 000000087 INF: Y Motor: Recv v 4096\r
17-02-28 20:11:06.259 -08 000000087 INF: Y Motor: Status After move finished OK:
17-02-28 20:11:06.259 -08 000000087 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:06.323 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:11:06.323 -08 000000087 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:06.323 -08 000000087 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:11:06.385 -08 000000087 INF: Y Motor: Recv v 402653184\r
17-02-28 20:11:06.385 -08 000000087 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:11:06.385 -08 000000087 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:11:06.385 -08 000000087 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:11:06.446 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:11:06.446 -08 000000087 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:11:06.446 -08 000000087 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:11:06.446 -08 000000087 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:06.446 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:06.510 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:06.513 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:11:06.513 -08 000000087 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:11:06.513 -08 000000087 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:06.573 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:11:06.573 -08 000000087 INF: ======================================
17-02-28 20:11:06.574 -08 000000102 INF: ===================Move X,Y===================
17-02-28 20:11:06.576 -08 000000102 INF: ======================================
17-02-28 20:11:06.577 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:06.578 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:06.578 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:11:06.578 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:11:06.634 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:11:06.634 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:11:06.694 -08 000000106 INF: FPGA: Recv ZFREQCL
17-02-28 20:11:06.694 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:11:06.695 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:06.695 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:11:06.758 -08 000000051 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:11:06.758 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:11:06.759 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:06.759 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:06.760 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:06.760 -08 000000098 INF: ===================Set YMotor gains for scans===================
17-02-28 20:11:06.760 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:11:06.760 -08 000000098 INF: ======================================
17-02-28 20:11:06.761 -08 000000100 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:11:06.761 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:11:06.764 -08 000000100 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:11:06.765 -08 000000100 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:11:06.765 -08 000000100 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:11:06.822 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:06.823 -08 000000090 INF: FPGA: Recv TDIYPOS
17-02-28 20:11:06.823 -08 000000100 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:11:06.825 -08 000000100 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:11:06.825 -08 000000100 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:11:06.882 -08 000000081 INF: FPGA: Recv TDIYARM2
17-02-28 20:11:06.882 -08 000000100 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:11:06.884 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:11:06.885 -08 000000100 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:11:06.885 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:11:06.887 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:11:06.888 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:11:06.889 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:11:07.072 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:07.135 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:07.255 -08 000000100 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:11:07.256 -08 000000100 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:11:07.256 -08 000000100 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:11:07.271 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:11:07.273 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:11:07.385 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:07.444 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:07.654 -08 000000100 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:11:07.654 -08 000000100 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:11:07.654 -08 000000100 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:11:07.669 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:11:07.671 -08 000000100 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:11:07.672 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:11:07.673 -08 000000100 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:07.674 -08 000000100 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:11:07.674 -08 000000100 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:07.676 -08 000000100 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:11:07.676 -08 000000100 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:11:07.676 -08 000000100 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:11:07.676 -08 000000100 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:11:07.694 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:07.695 -08 000000032 INF: FPGA: Recv ZYT 
17-02-28 20:11:07.695 -08 000000100 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:11:07.695 -08 000000100 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:11:07.756 -08 000000053 INF: FPGA: Recv ZARM
17-02-28 20:11:07.756 -08 000000100 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.7909 ms
17-02-28 20:11:07.756 -08 000000100 INF: Z Motor: ArmAbsStepped took 79.9592 ms
17-02-28 20:11:07.756 -08 000000100 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:07.757 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:07.758 -08 000000100 INF: ===================TDI Scan Setup===================
17-02-28 20:11:07.759 -08 000000100 INF: ======================================
17-02-28 20:11:07.760 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:07.761 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:07.761 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:07.762 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:07.762 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:07.763 -08 000000109 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:11:07.763 -08 000000062 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:11:07.763 -08 000000109 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:11:07.763 -08 000000109 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:11:07.763 -08 000000109 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:11:07.763 -08 000000062 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:11:07.763 -08 000000062 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:11:07.763 -08 000000062 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:11:07.763 -08 000000109 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:11:07.766 -08 000000062 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:11:08.007 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:08.071 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:08.132 -08 000000055 INF: FPGA: Recv EX2MV
17-02-28 20:11:08.132 -08 000000055 INF: FPGA: Recv EX1MV
17-02-28 20:11:08.132 -08 000000109 INF: Excitation Filter 2: Moved -107 steps in 368.4866 ms
17-02-28 20:11:08.132 -08 000000109 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.6512 ms
17-02-28 20:11:08.132 -08 000000109 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.7273 ms
17-02-28 20:11:08.132 -08 000000062 INF: Excitation Filter 1: Moved -107 steps in 368.4004 ms
17-02-28 20:11:08.132 -08 000000062 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.801 ms
17-02-28 20:11:08.132 -08 000000062 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.8748 ms
17-02-28 20:11:08.132 -08 000000109 INF: ======================================
17-02-28 20:11:08.132 -08 000000062 INF: ======================================
17-02-28 20:11:08.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:08.135 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:08.136 -08 000000051 INF: ===================Serial===================
17-02-28 20:11:08.136 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:11:08.136 -08 000000074 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:08.136 -08 000000068 INF: ===================Move Y Motor without settling===================
17-02-28 20:11:08.136 -08 000000068 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:11:08.136 -08 000000068 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:11:08.136 -08 000000068 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:08.136 -08 000000051 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:11:08.137 -08 000000074 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:11:08.137 -08 000000051 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:11:08.137 -08 000000058 INF: ===================Camera TDI, Parallel===================
17-02-28 20:11:08.138 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:11:08.138 -08 000000102 INF: ===================Camera TDI===================
17-02-28 20:11:08.138 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:08.139 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:08.139 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:08.139 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:08.142 -08 000000074 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:11:08.195 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:11:08.195 -08 000000068 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:11:08.195 -08 000000068 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:08.256 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:11:08.256 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:08.289 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:08.289 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:08.290 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:08.290 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:08.319 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:11:08.319 -08 000000068 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:08.319 -08 000000068 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:11:08.319 -08 000000068 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:11:08.321 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:08.380 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:08.381 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:11:08.381 -08 000000068 INF: Y Motor: Start the move command
17-02-28 20:11:08.381 -08 000000068 INF: Y Motor: Xmit t 1\r
17-02-28 20:11:08.439 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:08.439 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:08.440 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:08.440 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:08.445 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:11:08.445 -08 000000068 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:11:08.445 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:08.569 -08 000000068 INF: Y Motor: Unshifted Position: 5934982
17-02-28 20:11:08.589 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:08.589 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:08.590 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:08.590 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:08.619 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:08.630 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:08.695 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:08.739 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:11:08.739 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:11:08.739 -08 000000090 INF: ===================Camera #0 Frame #1===================
17-02-28 20:11:08.740 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:11:08.740 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:11:08.740 -08 000000102 INF: ===================Camera #2 Frame #1===================
17-02-28 20:11:08.746 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:08.881 -08 000000068 INF: Y Motor: Unshifted Position: 5888176
17-02-28 20:11:08.892 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:11:08.892 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:11:08.892 -08 000000090 INF: ===================Camera #0 Frame #3===================
17-02-28 20:11:08.893 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:11:08.893 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:11:08.893 -08 000000102 INF: ===================Camera #2 Frame #3===================
17-02-28 20:11:08.931 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:08.945 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:09.005 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:09.049 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:11:09.049 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:11:09.049 -08 000000090 INF: ===================Camera #0 Frame #4===================
17-02-28 20:11:09.050 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:11:09.050 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:11:09.050 -08 000000102 INF: ===================Camera #2 Frame #4===================
17-02-28 20:11:09.056 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:09.192 -08 000000068 INF: Y Motor: Unshifted Position: 5841469
17-02-28 20:11:09.202 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:11:09.202 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:11:09.202 -08 000000090 INF: ===================Camera #0 Frame #5===================
17-02-28 20:11:09.203 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:11:09.203 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:11:09.203 -08 000000102 INF: ===================Camera #2 Frame #5===================
17-02-28 20:11:09.242 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:09.252 -08 000000098 INF: FPGA: Recv ZWAIT 
17-02-28 20:11:09.252 -08 000000051 INF: ===================Serial===================
17-02-28 20:11:09.254 -08 000000051 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:11:09.254 -08 000000051 INF: ===================Serial===================
17-02-28 20:11:09.255 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:09.255 -08 000000051 INF: ======================================
17-02-28 20:11:09.318 -08 000000106 INF: FPGA: Recv TDIYWAIT
17-02-28 20:11:09.318 -08 000000074 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:09.319 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:09.320 -08 000000074 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:11:09.321 -08 000000081 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:11:09.321 -08 000000110 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:11:09.321 -08 000000081 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:11:09.321 -08 000000081 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:11:09.321 -08 000000081 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:11:09.321 -08 000000110 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:11:09.321 -08 000000081 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:11:09.321 -08 000000110 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:11:09.321 -08 000000110 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:11:09.322 -08 000000110 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:11:09.355 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:11:09.355 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:11:09.355 -08 000000090 INF: ===================Camera #0 Frame #6===================
17-02-28 20:11:09.356 -08 000000102 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:11:09.356 -08 000000102 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:11:09.356 -08 000000102 INF: ===================Camera #2 Frame #6===================
17-02-28 20:11:09.358 -08 000000090 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:11:09.359 -08 000000102 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:11:09.359 -08 000000090 INF: ===================CameraTDI Cleanup===================
17-02-28 20:11:09.360 -08 000000102 INF: ===================CameraTDI Cleanup===================
17-02-28 20:11:09.370 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:09.382 -08 000000090 INF: Camera #0 ReleaseBuffer
17-02-28 20:11:09.382 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:11:09.383 -08 000000090 INF: ======================================
17-02-28 20:11:09.407 -08 000000102 INF: Camera #2 ReleaseBuffer
17-02-28 20:11:09.407 -08 000000102 INF: ===================Camera TDI===================
17-02-28 20:11:09.408 -08 000000102 INF: ======================================
17-02-28 20:11:09.410 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:11:09.411 -08 000000058 INF: ======================================
17-02-28 20:11:09.504 -08 000000068 INF: Y Motor: Unshifted Position: 5797057
17-02-28 20:11:09.554 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:09.569 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:09.629 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:09.690 -08 000000055 INF: FPGA: Recv EX1MV
17-02-28 20:11:09.690 -08 000000055 INF: FPGA: Recv EX2MV
17-02-28 20:11:09.690 -08 000000110 INF: Excitation Filter 2: Moved 107 steps in 368.9338 ms
17-02-28 20:11:09.690 -08 000000081 INF: Excitation Filter 1: Moved 107 steps in 369.071 ms
17-02-28 20:11:09.690 -08 000000110 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.0623 ms
17-02-28 20:11:09.690 -08 000000110 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.1702 ms
17-02-28 20:11:09.690 -08 000000081 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.2033 ms
17-02-28 20:11:09.690 -08 000000081 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.377 ms
17-02-28 20:11:09.690 -08 000000110 INF: ======================================
17-02-28 20:11:09.691 -08 000000081 INF: ======================================
17-02-28 20:11:09.692 -08 000000068 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:11:09.692 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:11:09.692 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:09.692 -08 000000074 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:09.693 -08 000000074 INF: ======================================
17-02-28 20:11:09.754 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:11:09.754 -08 000000068 INF: Y Motor: Moved to 62.9704 after 1309 ms
17-02-28 20:11:09.754 -08 000000068 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:11:09.816 -08 000000068 INF: Y Motor: Recv v 4097\r
17-02-28 20:11:09.816 -08 000000068 INF: Y Motor: Status After move finished OK:
17-02-28 20:11:09.816 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:09.879 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:09.880 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:11:09.880 -08 000000068 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:09.880 -08 000000068 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:11:09.943 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:09.944 -08 000000068 INF: Y Motor: Recv v 134217728\r
17-02-28 20:11:09.944 -08 000000068 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:11:09.944 -08 000000068 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:11:09.944 -08 000000068 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:11:10.006 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:11:10.006 -08 000000068 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:11:10.006 -08 000000068 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:11:10.006 -08 000000068 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:10.066 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:11:10.066 -08 000000068 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:11:10.066 -08 000000068 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:10.130 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:11:10.130 -08 000000068 INF: ======================================
17-02-28 20:11:10.131 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:10.132 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:10.133 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:10.133 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:11:10.190 -08 000000101 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:11:10.190 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:11:10.193 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:10.253 -08 000000074 INF: FPGA: Recv TDIYERD 6297042
17-02-28 20:11:10.254 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:10.254 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:11:10.313 -08 000000090 INF: FPGA: Recv ZADCR 2424
17-02-28 20:11:10.313 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:11:10.313 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:11:10.375 -08 000000085 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:11:10.375 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:11:10.375 -08 000000042 INF: TDIScan finished after 6850.0469 ms
17-02-28 20:11:10.375 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:11:10.375 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:11:10.375 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:11:10.439 -08 000000105 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:11:10.439 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:10.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:10.441 -08 000000109 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:11:10.441 -08 000000064 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:11:10.441 -08 000000032 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:11:10.441 -08 000000109 INF: ======================================
17-02-28 20:11:10.441 -08 000000064 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:11:10.441 -08 000000032 INF: ======================================
17-02-28 20:11:10.441 -08 000000064 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:11:10.502 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:11:10.502 -08 000000064 INF: ======================================
17-02-28 20:11:10.503 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:10.504 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:10.504 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:10.505 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:11:10.536 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:10.536 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:11:10.564 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:10.592 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:10.592 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:11:10.620 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:10.620 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:11:10.664 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:10.664 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:11:10.664 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:11:10.665 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:11:10.673 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:11:10.673 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:11:10.673 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:11:10.814 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:10.879 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:11.129 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:11.189 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:11.359 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:11:11.381 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0817359121904231Best Z position at top surface = -0.153528606555299Best Z position at top surface + compensator offset = -0.130828606555299 C:2,L:7,B
17-02-28 20:11:11.383 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.153528606555299
17-02-28 20:11:11.383 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94554
17-02-28 20:11:11.383 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0817359121904231
17-02-28 20:11:11.383 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.6002
17-02-28 20:11:11.383 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0817359121904231.
17-02-28 20:11:11.383 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:11:11.439 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:11.502 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:11.519 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:11:11.519 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:11:11.563 -08 000000010 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:11.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:11:11.565 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:11.565 -08 000000042 INF: Lane 7, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:11:11.565 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:11.566 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:11.566 -08 000000032 INF: ===================Move Tilt Motor 1===================
17-02-28 20:11:11.566 -08 000000076 INF: ===================Move Tilt Motor 2===================
17-02-28 20:11:11.567 -08 000000066 INF: ===================Move Tilt Motor 3===================
17-02-28 20:11:11.567 -08 000000032 INF: ======================================
17-02-28 20:11:11.567 -08 000000066 INF: ======================================
17-02-28 20:11:11.567 -08 000000076 INF: ======================================
17-02-28 20:11:11.568 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:11.568 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:11.569 -08 000000042 INF: ETF Best Z: -0.08173591 mm (21426 DAC)
17-02-28 20:11:11.569 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:11.570 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:11.570 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:11:11.570 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:11.571 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:11.577 -08 000000042 INF: Swath 1 position calculated to be: {X=85.21818, Y=39.78827} from estimated center X= 85.73699, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:11:11.577 -08 000000042 INF: Swath 2 position calculated to be: {X=86.32618, Y=39.78827} from estimated center X= 85.73699, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:11:11.981 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:11.986 -08 000000042 INF: Swath 0: Converted transform from (-41.62104, -11.55526) pixels to (-0.01449, -0.00414) mm.
17-02-28 20:11:11.992 -08 000000042 INF: Swath 1: Converted transform from (-67.19103, -10.90772) pixels to (-0.023115, -0.003795) mm.
17-02-28 20:11:11.993 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827===================
17-02-28 20:11:11.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827===================
17-02-28 20:11:11.994 -08 000000042 INF: Transformed XStagePosition from 85.21818 mm to 85.2036877954379 mm.
17-02-28 20:11:12.006 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5741378016546 mm.
17-02-28 20:11:12.006 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3741378016546 mm.
17-02-28 20:11:12.006 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4648878016546 mm.
17-02-28 20:11:12.008 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:12.009 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:11:12.009 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:12.009 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = G_1
17-02-28 20:11:12.017 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:12.018 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:12.018 -08 000000084 INF: ===================MoveEmissionFilters===================
17-02-28 20:11:12.018 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:11:12.018 -08 000000091 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:11:12.019 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:11:12.019 -08 000000044 INF: ===================Move X,Y, Parallel===================
17-02-28 20:11:12.019 -08 000000091 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:11:12.019 -08 000000076 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:11:12.019 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:11:12.019 -08 000000091 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:11:12.019 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:11:12.019 -08 000000091 INF: Z Motor: Moving to -0.1017 mm, started at -0.0100 mm
17-02-28 20:11:12.020 -08 000000091 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:11:12.020 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:11:12.020 -08 000000076 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:11:12.020 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:11:12.020 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:11:12.021 -08 000000105 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:11:12.021 -08 000000110 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:11:12.021 -08 000000087 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:11:12.021 -08 000000083 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:11:12.021 -08 000000054 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:11:12.021 -08 000000064 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:11:12.021 -08 000000106 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:11:12.021 -08 000000110 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:11:12.021 -08 000000045 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:11:12.022 -08 000000064 INF: ======================================
17-02-28 20:11:12.022 -08 000000110 INF: ======================================
17-02-28 20:11:12.022 -08 000000045 INF: ======================================
17-02-28 20:11:12.022 -08 000000105 INF: ======================================
17-02-28 20:11:12.022 -08 000000087 INF: ======================================
17-02-28 20:11:12.022 -08 000000054 INF: ======================================
17-02-28 20:11:12.023 -08 000000034 INF: ===================Move X Motor without settling===================
17-02-28 20:11:12.023 -08 000000074 INF: ===================Move Y Motor without settling===================
17-02-28 20:11:12.023 -08 000000034 INF: X Motor: Xmit PR VM\n
17-02-28 20:11:12.023 -08 000000074 INF: Y Motor: Moving to 64.5741 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:11:12.023 -08 000000074 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:11:12.023 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:12.023 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:11:12.024 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:11:12.024 -08 000000083 INF: ======================================
17-02-28 20:11:12.024 -08 000000106 INF: ======================================
17-02-28 20:11:12.025 -08 000000066 INF: ======================================
17-02-28 20:11:12.025 -08 000000051 INF: ======================================
17-02-28 20:11:12.025 -08 000000076 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:11:12.026 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:11:12.027 -08 000000076 INF: ======================================
17-02-28 20:11:12.027 -08 000000062 INF: ======================================
17-02-28 20:11:12.028 -08 000000084 INF: ======================================
17-02-28 20:11:12.031 -08 000000098 INF: FPGA: Recv ZTRG 
17-02-28 20:11:12.031 -08 000000091 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:11:12.032 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:12.049 -08 000000034 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:11:12.049 -08 000000034 INF: X Motor: Xmit PR VI\n
17-02-28 20:11:12.093 -08 000000083 INF: FPGA: Recv ZYT 
17-02-28 20:11:12.093 -08 000000091 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:11:12.093 -08 000000091 INF: FPGA: Xmit ZMV 26669\n
17-02-28 20:11:12.095 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:11:12.095 -08 000000074 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:11:12.095 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:12.112 -08 000000034 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:11:12.112 -08 000000034 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:11:12.112 -08 000000034 INF: X Motor: Moving to 85.2037 mm @15.000 mm/sec, started at 85.7749 mm
17-02-28 20:11:12.112 -08 000000034 INF: X Motor: Xmit MA 10733\n
17-02-28 20:11:12.155 -08 000000058 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:11:12.155 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:11:12.157 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:11:12.157 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:12.172 -08 000000034 INF: X Motor: Recv MA 10733\r\n>
17-02-28 20:11:12.172 -08 000000034 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:11:12.216 -08 000000102 INF: FPGA: Recv ZMV 
17-02-28 20:11:12.216 -08 000000091 INF: Z Motor: MoveAndTrigger 'ZMV' command took 123.0441 ms
17-02-28 20:11:12.216 -08 000000091 INF: FPGA: Xmit ZDACR\n
17-02-28 20:11:12.218 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:11:12.218 -08 000000074 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:12.218 -08 000000074 INF: Y Motor: Set target position to 5957414 encoder counts
17-02-28 20:11:12.218 -08 000000074 INF: Y Motor: Xmit s r0xca 5957414\r
17-02-28 20:11:12.281 -08 000000076 INF: FPGA: Recv ZDACR 26669
17-02-28 20:11:12.281 -08 000000091 INF: Z Motor: MoveAndTrigger took 261.5645 ms w/comms
17-02-28 20:11:12.281 -08 000000091 INF: Z Motor: After move to -0.1017, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:11:12.281 -08 000000091 INF: Z Motor: MoveAbsStepped took 261.7284 ms
17-02-28 20:11:12.281 -08 000000091 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:11:12.282 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:12.283 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:11:12.283 -08 000000074 INF: Y Motor: Start the move command
17-02-28 20:11:12.283 -08 000000074 INF: Y Motor: Xmit t 1\r
17-02-28 20:11:12.283 -08 000000091 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:11:12.284 -08 000000109 INF: ===================TDI Scan Setup===================
17-02-28 20:11:12.284 -08 000000101 INF: ===================Camera Arm TDI===================
17-02-28 20:11:12.284 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:12.284 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:11:12.285 -08 000000109 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:11:12.285 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:11:12.285 -08 000000109 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:11:12.286 -08 000000109 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:11:12.342 -08 000000058 INF: FPGA: Recv ZSEL 
17-02-28 20:11:12.342 -08 000000109 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:11:12.343 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:12.343 -08 000000109 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:11:12.344 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:11:12.344 -08 000000074 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:11:12.344 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:12.404 -08 000000102 INF: FPGA: Recv TDIBB
17-02-28 20:11:12.404 -08 000000109 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:11:12.405 -08 000000109 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:11:12.405 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:12.407 -08 000000109 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:11:12.407 -08 000000109 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:11:12.407 -08 000000109 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:11:12.466 -08 000000068 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:12.466 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:12.468 -08 000000074 INF: Y Motor: Unshifted Position: 5877265
17-02-28 20:11:12.468 -08 000000109 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:11:12.468 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:12.470 -08 000000109 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:11:12.470 -08 000000109 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:11:12.470 -08 000000109 INF: Z Motor: Arming to move to -0.0617 mm
17-02-28 20:11:12.470 -08 000000109 INF: FPGA: Xmit ZYT 6437414 4\n
17-02-28 20:11:12.518 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:12.530 -08 000000105 INF: FPGA: Recv ZYT 
17-02-28 20:11:12.530 -08 000000109 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6377265 enc / 63.773 mm / ) = 6437414 enc / 64.374 mm
17-02-28 20:11:12.530 -08 000000109 INF: FPGA: Xmit ZARM 16183\n
17-02-28 20:11:12.592 -08 000000045 INF: FPGA: Recv ZARM
17-02-28 20:11:12.592 -08 000000109 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9306 ms
17-02-28 20:11:12.592 -08 000000109 INF: Z Motor: ArmAbsStepped took 121.8896 ms
17-02-28 20:11:12.592 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:12.593 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:12.593 -08 000000109 INF: ===================TDI Scan Setup===================
17-02-28 20:11:12.595 -08 000000109 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:11:12.595 -08 000000109 INF: ===================TDI Scan Setup===================
17-02-28 20:11:12.597 -08 000000109 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:11:12.597 -08 000000109 INF: ===================TDI Scan Setup===================
17-02-28 20:11:12.599 -08 000000109 INF: ======================================
17-02-28 20:11:12.609 -08 000000034 INF: X Motor: Xmit PR ER\n
17-02-28 20:11:12.644 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:12.654 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:12.671 -08 000000034 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:11:12.671 -08 000000034 INF: X Motor: Moved to 85.2036 after 498 ms
17-02-28 20:11:12.671 -08 000000034 INF: ======================================
17-02-28 20:11:12.782 -08 000000074 INF: Y Motor: Unshifted Position: 5957415
17-02-28 20:11:12.782 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:11:12.782 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:12.843 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:11:12.843 -08 000000074 INF: Y Motor: Moved to 64.5742 after 498 ms
17-02-28 20:11:12.843 -08 000000074 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:11:12.904 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:12.905 -08 000000074 INF: Y Motor: Recv v 4096\r
17-02-28 20:11:12.905 -08 000000074 INF: Y Motor: Status After move finished OK:
17-02-28 20:11:12.905 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:12.967 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:12.968 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:11:12.968 -08 000000074 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:12.968 -08 000000074 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:11:13.030 -08 000000074 INF: Y Motor: Recv v 402653184\r
17-02-28 20:11:13.030 -08 000000074 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:11:13.030 -08 000000074 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:11:13.030 -08 000000074 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:11:13.094 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:11:13.094 -08 000000074 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:11:13.094 -08 000000074 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:11:13.094 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:13.155 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:11:13.155 -08 000000074 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:11:13.155 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:13.217 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:11:13.217 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:13.217 -08 000000074 INF: ======================================
17-02-28 20:11:13.218 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:11:13.219 -08 000000044 INF: ======================================
17-02-28 20:11:13.243 -08 000000101 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:11:13.243 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:11:13.243 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:11:13.259 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:11:13.261 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:11:13.280 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:13.530 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:13.592 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:13.842 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:13.902 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:14.152 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:14.215 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:14.271 -08 000000101 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:11:14.271 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:11:14.271 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:11:14.287 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:11:14.289 -08 000000101 INF: ===================Camera Arm TDI===================
17-02-28 20:11:14.290 -08 000000101 INF: ======================================
17-02-28 20:11:14.291 -08 000000091 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:11:14.292 -08 000000091 INF: ======================================
17-02-28 20:11:14.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:14.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:14.294 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:11:14.294 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:11:14.340 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:11:14.340 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:11:14.402 -08 000000087 INF: FPGA: Recv ZFREQCL
17-02-28 20:11:14.402 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:11:14.402 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:14.403 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:11:14.464 -08 000000110 INF: FPGA: Recv TDIYERD 6457414
17-02-28 20:11:14.464 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457414 counts (64.574 mm)
17-02-28 20:11:14.464 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:14.465 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:14.465 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:14.465 -08 000000034 INF: ===================TDI FPGA Arm===================
17-02-28 20:11:14.465 -08 000000030 INF: ===================Set YMotor gains for scans===================
17-02-28 20:11:14.466 -08 000000030 INF: ======================================
17-02-28 20:11:14.466 -08 000000034 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:11:14.467 -08 000000034 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:11:14.467 -08 000000034 INF: FPGA: Xmit TDIYPOS 6346489\n
17-02-28 20:11:14.525 -08 000000106 INF: FPGA: Recv TDIYPOS
17-02-28 20:11:14.525 -08 000000034 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:11:14.526 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:14.526 -08 000000034 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:11:14.526 -08 000000034 INF: FPGA: Xmit TDIYARM3 139264 6437414 1 1\n
17-02-28 20:11:14.587 -08 000000104 INF: FPGA: Recv TDIYARM3
17-02-28 20:11:14.587 -08 000000034 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:11:14.588 -08 000000034 INF: ===================TDI FPGA Arm===================
17-02-28 20:11:14.589 -08 000000034 INF: ======================================
17-02-28 20:11:14.590 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:14.591 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:14.591 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:14.591 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:14.592 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:14.593 -08 000000076 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:11:14.593 -08 000000044 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:11:14.593 -08 000000076 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:11:14.593 -08 000000076 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:11:14.593 -08 000000076 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:11:14.593 -08 000000044 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:11:14.593 -08 000000044 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:11:14.593 -08 000000044 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:11:14.593 -08 000000076 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:11:14.594 -08 000000044 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:11:14.776 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:14.838 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:14.964 -08 000000100 INF: FPGA: Recv EX2MV
17-02-28 20:11:14.964 -08 000000100 INF: FPGA: Recv EX1MV
17-02-28 20:11:14.964 -08 000000076 INF: Excitation Filter 2: Moved -107 steps in 370.9657 ms
17-02-28 20:11:14.964 -08 000000044 INF: Excitation Filter 1: Moved -107 steps in 370.8771 ms
17-02-28 20:11:14.964 -08 000000076 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 371.0695 ms
17-02-28 20:11:14.964 -08 000000044 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 371.0071 ms
17-02-28 20:11:14.964 -08 000000044 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 371.1124 ms
17-02-28 20:11:14.964 -08 000000076 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 371.1801 ms
17-02-28 20:11:14.964 -08 000000044 INF: ======================================
17-02-28 20:11:14.964 -08 000000076 INF: ======================================
17-02-28 20:11:14.965 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:14.966 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:14.967 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:11:14.967 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:14.967 -08 000000039 INF: ===================FPGA Z Wait===================
17-02-28 20:11:14.967 -08 000000090 INF: ===================Move Y Motor without settling===================
17-02-28 20:11:14.967 -08 000000039 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:11:14.968 -08 000000090 INF: Y Motor: Moving to 14.9258 mm @6.500 mm/sec, started at 64.5742 mm
17-02-28 20:11:14.968 -08 000000090 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:11:14.968 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:14.968 -08 000000051 INF: ===================Camera TDI, Parallel===================
17-02-28 20:11:14.968 -08 000000032 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:11:14.969 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:11:14.969 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:11:14.969 -08 000000032 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:11:14.970 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:14.970 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:14.971 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:14.971 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:15.027 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:11:15.027 -08 000000090 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:11:15.027 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:15.088 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:15.089 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:11:15.089 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:15.120 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:15.120 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:15.121 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:15.121 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:15.151 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:15.152 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:11:15.152 -08 000000090 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:15.152 -08 000000090 INF: Y Motor: Set target position to 992580 encoder counts
17-02-28 20:11:15.152 -08 000000090 INF: Y Motor: Xmit s r0xca 992580\r
17-02-28 20:11:15.214 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:11:15.214 -08 000000090 INF: Y Motor: Start the move command
17-02-28 20:11:15.214 -08 000000090 INF: Y Motor: Xmit t 1\r
17-02-28 20:11:15.270 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:15.270 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:15.271 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:15.271 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:15.278 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:11:15.278 -08 000000090 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:11:15.278 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:15.337 -08 000000087 INF: FPGA: Recv ZWAIT 
17-02-28 20:11:15.337 -08 000000039 INF: ======================================
17-02-28 20:11:15.401 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:15.401 -08 000000090 INF: Y Motor: Unshifted Position: 5894915
17-02-28 20:11:15.420 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:11:15.420 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:11:15.420 -08 000000105 INF: ===================Camera #2 Frame #5===================
17-02-28 20:11:15.421 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:11:15.421 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:11:15.421 -08 000000085 INF: ===================Camera #0 Frame #5===================
17-02-28 20:11:15.451 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:15.464 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:15.577 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:15.586 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:11:15.586 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:11:15.586 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:11:15.586 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:11:15.586 -08 000000085 INF: ===================Camera #0 Frame #11===================
17-02-28 20:11:15.586 -08 000000105 INF: ===================Camera #2 Frame #11===================
17-02-28 20:11:15.714 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:15.714 -08 000000090 INF: Y Motor: Unshifted Position: 5692113
17-02-28 20:11:15.754 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:11:15.754 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:11:15.754 -08 000000085 INF: ===================Camera #0 Frame #17===================
17-02-28 20:11:15.755 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:11:15.755 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:11:15.755 -08 000000105 INF: ===================Camera #2 Frame #17===================
17-02-28 20:11:15.764 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:15.774 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:15.887 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:15.922 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:11:15.922 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:11:15.922 -08 000000085 INF: ===================Camera #0 Frame #23===================
17-02-28 20:11:15.924 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:11:15.924 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:11:15.924 -08 000000105 INF: ===================Camera #2 Frame #23===================
17-02-28 20:11:16.024 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:16.024 -08 000000090 INF: Y Motor: Unshifted Position: 5489103
17-02-28 20:11:16.074 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:16.087 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:16.090 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:11:16.090 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:11:16.090 -08 000000085 INF: ===================Camera #0 Frame #29===================
17-02-28 20:11:16.093 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:11:16.093 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:11:16.093 -08 000000105 INF: ===================Camera #2 Frame #29===================
17-02-28 20:11:16.199 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:16.259 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:11:16.259 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:11:16.259 -08 000000085 INF: ===================Camera #0 Frame #35===================
17-02-28 20:11:16.263 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:11:16.263 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:11:16.263 -08 000000105 INF: ===================Camera #2 Frame #36===================
17-02-28 20:11:16.338 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:16.338 -08 000000090 INF: Y Motor: Unshifted Position: 5286300
17-02-28 20:11:16.388 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:16.401 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:16.427 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:11:16.427 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:11:16.427 -08 000000085 INF: ===================Camera #0 Frame #42===================
17-02-28 20:11:16.435 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:11:16.435 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:11:16.435 -08 000000105 INF: ===================Camera #2 Frame #42===================
17-02-28 20:11:16.514 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:16.599 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:11:16.599 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:11:16.599 -08 000000085 INF: ===================Camera #0 Frame #48===================
17-02-28 20:11:16.604 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:11:16.604 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:11:16.604 -08 000000105 INF: ===================Camera #2 Frame #48===================
17-02-28 20:11:16.649 -08 000000090 INF: Y Motor: Unshifted Position: 5083926
17-02-28 20:11:16.651 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:16.699 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:16.712 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:16.767 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:11:16.767 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:11:16.767 -08 000000085 INF: ===================Camera #0 Frame #54===================
17-02-28 20:11:16.773 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:11:16.773 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:11:16.773 -08 000000105 INF: ===================Camera #2 Frame #54===================
17-02-28 20:11:16.825 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:16.935 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:11:16.935 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:11:16.935 -08 000000085 INF: ===================Camera #0 Frame #60===================
17-02-28 20:11:16.942 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:11:16.942 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:11:16.942 -08 000000105 INF: ===================Camera #2 Frame #61===================
17-02-28 20:11:16.962 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:16.962 -08 000000090 INF: Y Motor: Unshifted Position: 4880261
17-02-28 20:11:17.012 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:17.025 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:17.103 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-02-28 20:11:17.103 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-02-28 20:11:17.103 -08 000000085 INF: ===================Camera #0 Frame #66===================
17-02-28 20:11:17.115 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:11:17.115 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:11:17.115 -08 000000105 INF: ===================Camera #2 Frame #67===================
17-02-28 20:11:17.136 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:17.272 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:11:17.272 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:11:17.272 -08 000000085 INF: ===================Camera #0 Frame #73===================
17-02-28 20:11:17.274 -08 000000090 INF: Y Motor: Unshifted Position: 4677460
17-02-28 20:11:17.275 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:17.285 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:11:17.285 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:11:17.285 -08 000000105 INF: ===================Camera #2 Frame #73===================
17-02-28 20:11:17.324 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:17.336 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:17.444 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:11:17.444 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:11:17.444 -08 000000085 INF: ===================Camera #0 Frame #79===================
17-02-28 20:11:17.449 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:17.455 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:11:17.455 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:11:17.455 -08 000000105 INF: ===================Camera #2 Frame #79===================
17-02-28 20:11:17.586 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:17.586 -08 000000090 INF: Y Motor: Unshifted Position: 4474433
17-02-28 20:11:17.613 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:11:17.613 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:11:17.613 -08 000000085 INF: ===================Camera #0 Frame #85===================
17-02-28 20:11:17.625 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:11:17.625 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:11:17.625 -08 000000105 INF: ===================Camera #2 Frame #86===================
17-02-28 20:11:17.636 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:17.649 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:17.762 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:17.782 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-02-28 20:11:17.782 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-02-28 20:11:17.782 -08 000000085 INF: ===================Camera #0 Frame #91===================
17-02-28 20:11:17.798 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:11:17.798 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:11:17.798 -08 000000105 INF: ===================Camera #2 Frame #92===================
17-02-28 20:11:17.897 -08 000000090 INF: Y Motor: Unshifted Position: 4270985
17-02-28 20:11:17.899 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:17.947 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:17.951 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:11:17.951 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:11:17.951 -08 000000085 INF: ===================Camera #0 Frame #98===================
17-02-28 20:11:17.960 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:17.968 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:11:17.968 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:11:17.968 -08 000000105 INF: ===================Camera #2 Frame #98===================
17-02-28 20:11:18.073 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:18.124 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:11:18.124 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:11:18.124 -08 000000085 INF: ===================Camera #0 Frame #104===================
17-02-28 20:11:18.138 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:11:18.138 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:11:18.138 -08 000000105 INF: ===================Camera #2 Frame #105===================
17-02-28 20:11:18.210 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:18.210 -08 000000090 INF: Y Motor: Unshifted Position: 4068183
17-02-28 20:11:18.260 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:18.273 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:18.293 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:11:18.293 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:11:18.293 -08 000000085 INF: ===================Camera #0 Frame #110===================
17-02-28 20:11:18.311 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:11:18.311 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:11:18.311 -08 000000105 INF: ===================Camera #2 Frame #111===================
17-02-28 20:11:18.385 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:18.463 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:11:18.463 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:11:18.463 -08 000000085 INF: ===================Camera #0 Frame #117===================
17-02-28 20:11:18.482 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:11:18.482 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:11:18.482 -08 000000105 INF: ===================Camera #2 Frame #117===================
17-02-28 20:11:18.523 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:18.523 -08 000000090 INF: Y Motor: Unshifted Position: 3865168
17-02-28 20:11:18.573 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:18.583 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:18.636 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:11:18.636 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:11:18.636 -08 000000085 INF: ===================Camera #0 Frame #123===================
17-02-28 20:11:18.652 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:11:18.652 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:11:18.652 -08 000000105 INF: ===================Camera #2 Frame #124===================
17-02-28 20:11:18.696 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:18.805 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:11:18.805 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:11:18.805 -08 000000085 INF: ===================Camera #0 Frame #129===================
17-02-28 20:11:18.826 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:11:18.826 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:11:18.826 -08 000000105 INF: ===================Camera #2 Frame #130===================
17-02-28 20:11:18.833 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:18.834 -08 000000090 INF: Y Motor: Unshifted Position: 3662796
17-02-28 20:11:18.884 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:18.897 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:18.975 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:11:18.975 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:11:18.975 -08 000000085 INF: ===================Camera #0 Frame #135===================
17-02-28 20:11:18.996 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:11:18.996 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:11:18.996 -08 000000105 INF: ===================Camera #2 Frame #136===================
17-02-28 20:11:19.010 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:19.145 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:11:19.145 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:11:19.145 -08 000000085 INF: ===================Camera #0 Frame #142===================
17-02-28 20:11:19.147 -08 000000090 INF: Y Motor: Unshifted Position: 3459352
17-02-28 20:11:19.147 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:19.167 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:11:19.167 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:11:19.167 -08 000000105 INF: ===================Camera #2 Frame #142===================
17-02-28 20:11:19.197 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:19.207 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:19.318 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:11:19.318 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:11:19.318 -08 000000085 INF: ===================Camera #0 Frame #148===================
17-02-28 20:11:19.320 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:19.337 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:11:19.337 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:11:19.337 -08 000000105 INF: ===================Camera #2 Frame #149===================
17-02-28 20:11:19.457 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:19.458 -08 000000090 INF: Y Motor: Unshifted Position: 3257201
17-02-28 20:11:19.487 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:11:19.487 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:11:19.487 -08 000000085 INF: ===================Camera #0 Frame #154===================
17-02-28 20:11:19.508 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:19.511 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:11:19.511 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:11:19.511 -08 000000105 INF: ===================Camera #2 Frame #155===================
17-02-28 20:11:19.520 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:19.633 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:19.657 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:11:19.657 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:11:19.657 -08 000000085 INF: ===================Camera #0 Frame #161===================
17-02-28 20:11:19.682 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:11:19.682 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:11:19.682 -08 000000105 INF: ===================Camera #2 Frame #161===================
17-02-28 20:11:19.770 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:19.770 -08 000000090 INF: Y Motor: Unshifted Position: 3054189
17-02-28 20:11:19.820 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:19.830 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:11:19.830 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:11:19.830 -08 000000085 INF: ===================Camera #0 Frame #167===================
17-02-28 20:11:19.833 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:19.852 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:11:19.852 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:11:19.852 -08 000000105 INF: ===================Camera #2 Frame #168===================
17-02-28 20:11:19.946 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:20.000 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:11:20.000 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:11:20.000 -08 000000085 INF: ===================Camera #0 Frame #173===================
17-02-28 20:11:20.026 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:11:20.026 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:11:20.026 -08 000000105 INF: ===================Camera #2 Frame #174===================
17-02-28 20:11:20.081 -08 000000090 INF: Y Motor: Unshifted Position: 2850526
17-02-28 20:11:20.083 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:20.131 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:20.144 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:20.170 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:11:20.170 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:11:20.170 -08 000000085 INF: ===================Camera #0 Frame #179===================
17-02-28 20:11:20.197 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:11:20.197 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:11:20.197 -08 000000105 INF: ===================Camera #2 Frame #180===================
17-02-28 20:11:20.257 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:20.340 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:11:20.340 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:11:20.340 -08 000000085 INF: ===================Camera #0 Frame #186===================
17-02-28 20:11:20.367 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:11:20.367 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:11:20.367 -08 000000105 INF: ===================Camera #2 Frame #187===================
17-02-28 20:11:20.394 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:20.394 -08 000000090 INF: Y Motor: Unshifted Position: 2647725
17-02-28 20:11:20.444 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:20.454 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:20.511 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:11:20.511 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:11:20.511 -08 000000085 INF: ===================Camera #0 Frame #192===================
17-02-28 20:11:20.541 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:11:20.541 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:11:20.541 -08 000000105 INF: ===================Camera #2 Frame #193===================
17-02-28 20:11:20.569 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:20.681 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:11:20.681 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:11:20.681 -08 000000085 INF: ===================Camera #0 Frame #198===================
17-02-28 20:11:20.704 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:20.707 -08 000000090 INF: Y Motor: Unshifted Position: 2444933
17-02-28 20:11:20.712 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:11:20.712 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:11:20.712 -08 000000105 INF: ===================Camera #2 Frame #199===================
17-02-28 20:11:20.757 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:20.767 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:20.851 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-02-28 20:11:20.851 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-02-28 20:11:20.851 -08 000000085 INF: ===================Camera #0 Frame #204===================
17-02-28 20:11:20.880 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:20.882 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:11:20.882 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:11:20.882 -08 000000105 INF: ===================Camera #2 Frame #206===================
17-02-28 20:11:21.017 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:21.018 -08 000000090 INF: Y Motor: Unshifted Position: 2242567
17-02-28 20:11:21.021 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:11:21.021 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:11:21.021 -08 000000085 INF: ===================Camera #0 Frame #211===================
17-02-28 20:11:21.056 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:11:21.056 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:11:21.056 -08 000000105 INF: ===================Camera #2 Frame #212===================
17-02-28 20:11:21.068 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:21.078 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:21.194 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:21.194 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:11:21.194 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:11:21.194 -08 000000085 INF: ===================Camera #0 Frame #217===================
17-02-28 20:11:21.227 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:11:21.227 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:11:21.227 -08 000000105 INF: ===================Camera #2 Frame #218===================
17-02-28 20:11:21.328 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:21.331 -08 000000090 INF: Y Motor: Unshifted Position: 2038900
17-02-28 20:11:21.364 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:11:21.364 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:11:21.364 -08 000000085 INF: ===================Camera #0 Frame #223===================
17-02-28 20:11:21.381 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:21.391 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:21.398 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:11:21.398 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:11:21.398 -08 000000105 INF: ===================Camera #2 Frame #225===================
17-02-28 20:11:21.504 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:21.534 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:11:21.534 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:11:21.534 -08 000000085 INF: ===================Camera #0 Frame #230===================
17-02-28 20:11:21.572 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:11:21.572 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:11:21.572 -08 000000105 INF: ===================Camera #2 Frame #231===================
17-02-28 20:11:21.641 -08 000000090 INF: Y Motor: Unshifted Position: 1836749
17-02-28 20:11:21.641 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:21.691 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:21.702 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:21.707 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:11:21.707 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:11:21.707 -08 000000085 INF: ===================Camera #0 Frame #236===================
17-02-28 20:11:21.743 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:11:21.743 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:11:21.743 -08 000000105 INF: ===================Camera #2 Frame #237===================
17-02-28 20:11:21.818 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:21.875 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:11:21.875 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:11:21.875 -08 000000085 INF: ===================Camera #0 Frame #242===================
17-02-28 20:11:21.913 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:11:21.913 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:11:21.913 -08 000000105 INF: ===================Camera #2 Frame #244===================
17-02-28 20:11:21.952 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:21.954 -08 000000090 INF: Y Motor: Unshifted Position: 1633723
17-02-28 20:11:22.004 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:22.014 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:22.043 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:11:22.043 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:11:22.043 -08 000000085 INF: ===================Camera #0 Frame #248===================
17-02-28 20:11:22.087 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:11:22.087 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:11:22.087 -08 000000105 INF: ===================Camera #2 Frame #250===================
17-02-28 20:11:22.130 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:22.213 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:11:22.213 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:11:22.213 -08 000000085 INF: ===================Camera #0 Frame #255===================
17-02-28 20:11:22.258 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:11:22.258 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:11:22.258 -08 000000105 INF: ===================Camera #2 Frame #256===================
17-02-28 20:11:22.264 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:22.265 -08 000000090 INF: Y Motor: Unshifted Position: 1430279
17-02-28 20:11:22.315 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:22.328 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:22.386 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:11:22.386 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:11:22.386 -08 000000085 INF: ===================Camera #0 Frame #261===================
17-02-28 20:11:22.429 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:11:22.429 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:11:22.429 -08 000000105 INF: ===================Camera #2 Frame #263===================
17-02-28 20:11:22.441 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:22.556 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:11:22.556 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:11:22.556 -08 000000085 INF: ===================Camera #0 Frame #267===================
17-02-28 20:11:22.578 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:22.578 -08 000000090 INF: Y Motor: Unshifted Position: 1227244
17-02-28 20:11:22.603 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:11:22.603 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:11:22.603 -08 000000105 INF: ===================Camera #2 Frame #269===================
17-02-28 20:11:22.628 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:22.638 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:22.701 -08 000000106 INF: FPGA: Recv TDIYWAIT
17-02-28 20:11:22.701 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:22.703 -08 000000032 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:11:22.703 -08 000000104 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:11:22.704 -08 000000084 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:11:22.704 -08 000000104 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:11:22.704 -08 000000104 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:11:22.704 -08 000000104 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:11:22.704 -08 000000104 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:11:22.704 -08 000000084 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:11:22.704 -08 000000084 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:11:22.704 -08 000000084 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:11:22.705 -08 000000084 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:11:22.726 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:11:22.726 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:11:22.726 -08 000000085 INF: ===================Camera #0 Frame #272===================
17-02-28 20:11:22.742 -08 000000085 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:11:22.743 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:11:22.753 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:22.888 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:22.891 -08 000000090 INF: Y Motor: Unshifted Position: 1024455
17-02-28 20:11:22.905 -08 000000085 INF: Camera #0 ReleaseBuffer
17-02-28 20:11:22.905 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:11:22.905 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:11:22.905 -08 000000105 INF: ===================Camera #2 Frame #272===================
17-02-28 20:11:22.905 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:11:22.914 -08 000000105 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:11:22.915 -08 000000105 INF: ===================CameraTDI Cleanup===================
17-02-28 20:11:22.934 -08 000000085 INF: ======================================
17-02-28 20:11:22.941 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:22.951 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:23.074 -08 000000076 INF: FPGA: Recv EX2MV
17-02-28 20:11:23.074 -08 000000076 INF: FPGA: Recv EX1MV
17-02-28 20:11:23.074 -08 000000084 INF: Excitation Filter 1: Moved 107 steps in 369.8792 ms
17-02-28 20:11:23.074 -08 000000084 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.9807 ms
17-02-28 20:11:23.074 -08 000000084 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.088 ms
17-02-28 20:11:23.074 -08 000000104 INF: Excitation Filter 2: Moved 107 steps in 370.1028 ms
17-02-28 20:11:23.074 -08 000000104 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.4073 ms
17-02-28 20:11:23.074 -08 000000104 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.5122 ms
17-02-28 20:11:23.074 -08 000000084 INF: ======================================
17-02-28 20:11:23.075 -08 000000104 INF: ======================================
17-02-28 20:11:23.075 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:23.076 -08 000000090 INF: Y Motor: Unshifted Position: 992581
17-02-28 20:11:23.076 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:11:23.076 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:23.077 -08 000000032 INF: ======================================
17-02-28 20:11:23.112 -08 000000105 INF: Camera #2 ReleaseBuffer
17-02-28 20:11:23.112 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:11:23.148 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:11:23.148 -08 000000090 INF: Y Motor: Moved to 14.9258 after 7869 ms
17-02-28 20:11:23.148 -08 000000090 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:11:23.164 -08 000000105 INF: ======================================
17-02-28 20:11:23.165 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:11:23.166 -08 000000051 INF: ======================================
17-02-28 20:11:23.201 -08 000000090 INF: Y Motor: Recv v 4097\r
17-02-28 20:11:23.201 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:23.201 -08 000000090 INF: Y Motor: Status After move finished OK:
17-02-28 20:11:23.201 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:23.264 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:23.265 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:11:23.265 -08 000000090 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:23.265 -08 000000090 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:11:23.327 -08 000000090 INF: Y Motor: Recv v 134217728\r
17-02-28 20:11:23.327 -08 000000090 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:11:23.327 -08 000000090 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:11:23.327 -08 000000090 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:11:23.389 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:11:23.389 -08 000000090 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:11:23.389 -08 000000090 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:11:23.389 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:23.452 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:11:23.452 -08 000000090 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:11:23.452 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:23.514 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:11:23.514 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:23.514 -08 000000090 INF: ======================================
17-02-28 20:11:23.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:23.516 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:23.517 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:23.517 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:11:23.573 -08 000000110 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:11:23.573 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:11:23.574 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:23.638 -08 000000083 INF: FPGA: Recv TDIYERD 1492581
17-02-28 20:11:23.638 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:11:23.698 -08 000000066 INF: FPGA: Recv ZADCR 21938
17-02-28 20:11:23.698 -08 000000042 INF: At scan end Y pos = 14.926 and Z pos = -0.084. Y moved -48.539 mm
17-02-28 20:11:23.698 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:11:23.762 -08 000000034 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:11:23.762 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:11:23.762 -08 000000042 INF: TDIScan finished after 11767.4155 ms
17-02-28 20:11:23.762 -08 000000042 INF: Image[0]: Y should trigger at 63.465 mm, 2nd row was at 64.374 mm (error = 0.909 mm)
17-02-28 20:11:23.762 -08 000000042 INF: Image[2]: Y should trigger at 63.465 mm, 2nd row was at 64.374 mm (error = 0.909 mm)
17-02-28 20:11:23.764 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:23.798 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.483 um
17-02-28 20:11:23.798 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:23.799 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:11:23.824 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:23.824 -08 000000090 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:11:23.825 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:23.826 -08 000000098 INF: ===================Dither Clean Up Command===================
17-02-28 20:11:23.826 -08 000000109 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:11:23.826 -08 000000039 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:11:23.826 -08 000000051 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:11:23.826 -08 000000051 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:11:23.826 -08 000000051 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:11:23.826 -08 000000109 INF: ======================================
17-02-28 20:11:23.826 -08 000000039 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:11:23.826 -08 000000039 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:11:23.826 -08 000000091 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:11:23.826 -08 000000105 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:11:23.827 -08 000000105 INF: ======================================
17-02-28 20:11:23.827 -08 000000091 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:11:23.887 -08 000000068 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:23.887 -08 000000068 INF: FPGA: Recv ZSEL 
17-02-28 20:11:23.887 -08 000000091 INF: FPGA: Xmit ZDACW 26669\n
17-02-28 20:11:23.887 -08 000000051 INF: ======================================
17-02-28 20:11:23.888 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:11:23.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:11:23.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:11:23.889 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:11:23.889 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:11:23.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 5 of 5 seconds left===================
17-02-28 20:11:23.889 -08 000000039 INF: ======================================
17-02-28 20:11:23.949 -08 000000062 INF: FPGA: Recv ZDACW 
17-02-28 20:11:23.949 -08 000000091 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:11:23.949 -08 000000091 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:11:24.011 -08 000000101 INF: FPGA: Recv TDIBB
17-02-28 20:11:24.011 -08 000000091 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:11:24.012 -08 000000091 INF: ======================================
17-02-28 20:11:24.013 -08 000000098 INF: ======================================
17-02-28 20:11:24.014 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:24.015 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:11:24.015 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:24.015 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:11:24.015 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:24.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:11:24.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:24.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:11:24.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:24.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827===================
17-02-28 20:11:24.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827===================
17-02-28 20:11:24.017 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 5 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:11:24.017 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 5 of 5 seconds left===================
17-02-28 20:11:24.018 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:11:24.018 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827===================
17-02-28 20:11:24.040 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:11:24.041 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:24.041 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827===================
17-02-28 20:11:24.041 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:24.041 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827===================
17-02-28 20:11:24.041 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:11:24.042 -08 000000042 INF: Transformed XStagePosition from 86.32618 mm to 86.3030645046383 mm.
17-02-28 20:11:24.066 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5744828014877 mm.
17-02-28 20:11:24.066 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3744828014877 mm.
17-02-28 20:11:24.066 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4652328014877 mm.
17-02-28 20:11:24.075 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:24.075 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:11:24.076 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:24.076 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -101.7 um, section = G_1
17-02-28 20:11:24.078 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:24.079 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:24.080 -08 000000090 INF: ===================Move X,Y===================
17-02-28 20:11:24.080 -08 000000110 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:11:24.081 -08 000000090 INF: ===================Move X,Y, Parallel===================
17-02-28 20:11:24.081 -08 000000110 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:11:24.081 -08 000000110 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:11:24.082 -08 000000110 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:11:24.082 -08 000000032 INF: ===================MoveEmissionFilters===================
17-02-28 20:11:24.083 -08 000000110 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:11:24.083 -08 000000045 INF: ===================Move X Motor without settling===================
17-02-28 20:11:24.083 -08 000000083 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:11:24.083 -08 000000045 INF: X Motor: Xmit PR VM\n
17-02-28 20:11:24.083 -08 000000053 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:11:24.084 -08 000000052 INF: ===================Move Y Motor without settling===================
17-02-28 20:11:24.084 -08 000000052 INF: Y Motor: Moving to 64.5745 mm @25.000 mm/sec, started at 14.9258 mm
17-02-28 20:11:24.084 -08 000000052 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:11:24.084 -08 000000083 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:11:24.084 -08 000000054 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:11:24.084 -08 000000053 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:11:24.084 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:24.084 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2101 Request: {"Cycle":2,"Lane":7,"Tile":2101,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF205","HCSMMF232","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.085 -08 000000034 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:11:24.085 -08 000000054 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:11:24.085 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:11:24.085 -08 000000039 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:11:24.085 -08 000000076 INF: ===================Camera Arm TDI===================
17-02-28 20:11:24.086 -08 000000055 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:11:24.086 -08 000000091 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:11:24.086 -08 000000010 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:11:24.086 -08 000000034 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:11:24.086 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:24.086 -08 000000039 INF: ======================================
17-02-28 20:11:24.086 -08 000000091 INF: ======================================
17-02-28 20:11:24.087 -08 000000047 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:11:24.087 -08 000000047 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:11:24.087 -08 000000010 INF: ======================================
17-02-28 20:11:24.087 -08 000000051 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:11:24.087 -08 000000047 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:11:24.088 -08 000000098 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:11:24.088 -08 000000076 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:11:24.088 -08 000000069 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:11:24.088 -08 000000044 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:11:24.088 -08 000000051 INF: ======================================
17-02-28 20:11:24.088 -08 000000076 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:11:24.088 -08 000000053 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:11:24.089 -08 000000069 INF: ======================================
17-02-28 20:11:24.089 -08 000000055 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:11:24.089 -08 000000044 INF: ======================================
17-02-28 20:11:24.089 -08 000000055 INF: ======================================
17-02-28 20:11:24.091 -08 000000098 INF: ======================================
17-02-28 20:11:24.091 -08 000000053 INF: ======================================
17-02-28 20:11:24.092 -08 000000054 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:11:24.092 -08 000000034 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:11:24.093 -08 000000083 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:11:24.093 -08 000000034 INF: ======================================
17-02-28 20:11:24.094 -08 000000083 INF: ======================================
17-02-28 20:11:24.095 -08 000000054 INF: ======================================
17-02-28 20:11:24.099 -08 000000032 INF: ======================================
17-02-28 20:11:24.142 -08 000000034 INF: FPGA: Recv ZSEL 
17-02-28 20:11:24.143 -08 000000047 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:11:24.144 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:11:24.144 -08 000000052 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:11:24.144 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:24.144 -08 000000047 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:11:24.147 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2105 Request: {"Cycle":2,"Lane":7,"Tile":2105,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF285","HCSMMF190","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.165 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2102 Request: {"Cycle":2,"Lane":7,"Tile":2102,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF222","HCSMMF202","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.172 -08 000000045 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:11:24.172 -08 000000045 INF: X Motor: Xmit PR VI\n
17-02-28 20:11:24.183 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2106 Request: {"Cycle":2,"Lane":7,"Tile":2106,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF265","HCSMMF180","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.188 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2104 Request: {"Cycle":2,"Lane":7,"Tile":2104,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF270","HCSMMF263","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.190 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2103 Request: {"Cycle":2,"Lane":7,"Tile":2103,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF245","HCSMMF218","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.201 -08 000000044 INF: FPGA: Recv TDIBB
17-02-28 20:11:24.202 -08 000000047 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:11:24.203 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2107 Request: {"Cycle":2,"Lane":7,"Tile":2107,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF186","HCSMMF247","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.204 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2109 Request: {"Cycle":2,"Lane":7,"Tile":2109,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF235","HCSMMF178","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.205 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:11:24.205 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:24.205 -08 000000047 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:11:24.206 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:24.206 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2111 Request: {"Cycle":2,"Lane":7,"Tile":2111,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF210","HCSMMF179","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.210 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2108 Request: {"Cycle":2,"Lane":7,"Tile":2108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF219","HCSMMF262","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.210 -08 000000047 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:11:24.211 -08 000000047 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:11:24.211 -08 000000047 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:11:24.212 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2113 Request: {"Cycle":2,"Lane":7,"Tile":2113,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF194","HCSMMF203","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.214 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2110 Request: {"Cycle":2,"Lane":7,"Tile":2110,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF234","HCSMMF244","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.217 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2115 Request: {"Cycle":2,"Lane":7,"Tile":2115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF191","HCSMMF196","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.226 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2112 Request: {"Cycle":2,"Lane":7,"Tile":2112,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF268","HCSMMF246","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.237 -08 000000045 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:11:24.237 -08 000000045 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:11:24.237 -08 000000045 INF: X Motor: Moving to 86.3031 mm @15.000 mm/sec, started at 85.2036 mm
17-02-28 20:11:24.237 -08 000000045 INF: X Motor: Xmit MA 11183\n
17-02-28 20:11:24.249 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2114 Request: {"Cycle":2,"Lane":7,"Tile":2114,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF259","HCSMMF225","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.249 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2119 Request: {"Cycle":2,"Lane":7,"Tile":2119,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF272","HCSMMF233","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.250 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2118 Request: {"Cycle":2,"Lane":7,"Tile":2118,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF238","HCSMMF195","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.251 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2116 Request: {"Cycle":2,"Lane":7,"Tile":2116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF250","HCSMMF273","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.251 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2120 Request: {"Cycle":2,"Lane":7,"Tile":2120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF226","HCSMMF188","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.253 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2126 Request: {"Cycle":2,"Lane":7,"Tile":2126,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF229","HCSMMF224","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.254 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2123 Request: {"Cycle":2,"Lane":7,"Tile":2123,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF187","HCSMMF255","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.256 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2122 Request: {"Cycle":2,"Lane":7,"Tile":2122,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF217","HCSMMF227","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.256 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2124 Request: {"Cycle":2,"Lane":7,"Tile":2124,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF283","HCSMMF256","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.258 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2128 Request: {"Cycle":2,"Lane":7,"Tile":2128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF215","HCSMMF284","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.258 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2117 Request: {"Cycle":2,"Lane":7,"Tile":2117,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF286","HCSMMF236","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.260 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2127 Request: {"Cycle":2,"Lane":7,"Tile":2127,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF201","HCSMMF237","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.261 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2125 Request: {"Cycle":2,"Lane":7,"Tile":2125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF264","HCSMMF181","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.262 -08 000000010 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:24.262 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:24.263 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2121 Request: {"Cycle":2,"Lane":7,"Tile":2121,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF207","HCSMMF281","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:24.264 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:11:24.264 -08 000000052 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:24.264 -08 000000052 INF: Y Motor: Set target position to 5957448 encoder counts
17-02-28 20:11:24.264 -08 000000052 INF: Y Motor: Xmit s r0xca 5957448\r
17-02-28 20:11:24.264 -08 000000047 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:11:24.264 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:24.264 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:24.266 -08 000000047 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:11:24.266 -08 000000047 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:11:24.266 -08 000000047 INF: Z Motor: Arming to move to -0.0617 mm
17-02-28 20:11:24.266 -08 000000047 INF: FPGA: Xmit ZYT 6437448 4\n
17-02-28 20:11:24.270 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:11:24.295 -08 000000045 INF: X Motor: Recv MA 11183\r\n>
17-02-28 20:11:24.295 -08 000000045 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:11:24.324 -08 000000098 INF: FPGA: Recv ZYT 
17-02-28 20:11:24.324 -08 000000047 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492581 enc / 14.926 mm / ) = 6437448 enc / 64.374 mm
17-02-28 20:11:24.324 -08 000000047 INF: FPGA: Xmit ZARM 16183\n
17-02-28 20:11:24.326 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:11:24.326 -08 000000052 INF: Y Motor: Start the move command
17-02-28 20:11:24.326 -08 000000052 INF: Y Motor: Xmit t 1\r
17-02-28 20:11:24.352 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:24.353 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:11:24.386 -08 000000106 INF: FPGA: Recv ZARM
17-02-28 20:11:24.386 -08 000000047 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9298 ms
17-02-28 20:11:24.386 -08 000000047 INF: Z Motor: ArmAbsStepped took 119.8447 ms
17-02-28 20:11:24.386 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:24.388 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:11:24.388 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:11:24.388 -08 000000052 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:11:24.388 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:24.389 -08 000000047 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:11:24.389 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:11:24.391 -08 000000047 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:11:24.391 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:11:24.392 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:24.392 -08 000000047 INF: ======================================
17-02-28 20:11:24.398 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:11:24.496 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:24.503 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:11:24.511 -08 000000052 INF: Y Motor: Unshifted Position: 1072778
17-02-28 20:11:24.561 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:24.603 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:24.609 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:11:24.685 -08 000000076 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:11:24.686 -08 000000076 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:11:24.686 -08 000000076 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:11:24.687 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:24.701 -08 000000076 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:11:24.703 -08 000000076 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:11:24.707 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:24.824 -08 000000052 INF: Y Motor: Unshifted Position: 1779250
17-02-28 20:11:24.874 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:24.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:11:24.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 4 of 5 seconds left===================
17-02-28 20:11:24.919 -08 000000045 INF: X Motor: Xmit PR ER\n
17-02-28 20:11:24.983 -08 000000045 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:11:24.983 -08 000000045 INF: X Motor: Moved to 86.3022 after 688 ms
17-02-28 20:11:24.983 -08 000000045 INF: ======================================
17-02-28 20:11:25.000 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:25.017 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:11:25.135 -08 000000052 INF: Y Motor: Unshifted Position: 2557598
17-02-28 20:11:25.185 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:25.303 -08 000000076 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:11:25.303 -08 000000076 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:11:25.304 -08 000000076 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:11:25.311 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:25.319 -08 000000076 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:11:25.321 -08 000000076 INF: ===================Camera Arm TDI===================
17-02-28 20:11:25.322 -08 000000076 INF: ======================================
17-02-28 20:11:25.323 -08 000000110 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:11:25.324 -08 000000110 INF: ======================================
17-02-28 20:11:25.449 -08 000000052 INF: Y Motor: Unshifted Position: 3342541
17-02-28 20:11:25.499 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:25.622 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:25.759 -08 000000052 INF: Y Motor: Unshifted Position: 4118451
17-02-28 20:11:25.809 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:25.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:11:25.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 3 of 5 seconds left===================
17-02-28 20:11:25.935 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:26.073 -08 000000052 INF: Y Motor: Unshifted Position: 4903390
17-02-28 20:11:26.123 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:26.247 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:26.292 -08 000000045 INF: RunCopyService queue size at 2/28/2017 8:11:26 PM is 2
17-02-28 20:11:26.384 -08 000000052 INF: Y Motor: Unshifted Position: 5678108
17-02-28 20:11:26.434 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:26.560 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:26.696 -08 000000052 INF: Y Motor: Unshifted Position: 5957451
17-02-28 20:11:26.696 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:11:26.696 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:26.760 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:11:26.760 -08 000000052 INF: Y Motor: Moved to 64.5745 after 2371 ms
17-02-28 20:11:26.760 -08 000000052 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:11:26.822 -08 000000052 INF: Y Motor: Recv v 4096\r
17-02-28 20:11:26.822 -08 000000052 INF: Y Motor: Status After move finished OK:
17-02-28 20:11:26.822 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:26.884 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:11:26.884 -08 000000052 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:26.884 -08 000000052 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:11:26.890 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:11:26.890 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 2 of 5 seconds left===================
17-02-28 20:11:26.948 -08 000000052 INF: Y Motor: Recv v 402653184\r
17-02-28 20:11:26.948 -08 000000052 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:11:26.948 -08 000000052 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:11:26.948 -08 000000052 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:11:27.010 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:11:27.010 -08 000000052 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:11:27.010 -08 000000052 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:11:27.010 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:27.071 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:11:27.071 -08 000000052 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:11:27.071 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:27.133 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:11:27.133 -08 000000052 INF: ======================================
17-02-28 20:11:27.134 -08 000000090 INF: ===================Move X,Y===================
17-02-28 20:11:27.135 -08 000000090 INF: ======================================
17-02-28 20:11:27.136 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:27.137 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:27.137 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:11:27.137 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:11:27.195 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:11:27.195 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:11:27.257 -08 000000054 INF: FPGA: Recv ZFREQCL
17-02-28 20:11:27.257 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:11:27.257 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:27.258 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:11:27.319 -08 000000102 INF: FPGA: Recv TDIYERD 6457449
17-02-28 20:11:27.319 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457449 counts (64.574 mm)
17-02-28 20:11:27.319 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:27.320 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:27.321 -08 000000010 INF: ===================TDI FPGA Arm===================
17-02-28 20:11:27.321 -08 000000087 INF: ===================Set YMotor gains for scans===================
17-02-28 20:11:27.321 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:11:27.321 -08 000000087 INF: ======================================
17-02-28 20:11:27.322 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:11:27.322 -08 000000010 INF: FPGA: Xmit TDIYPOS 6346523\n
17-02-28 20:11:27.384 -08 000000076 INF: FPGA: Recv TDIYPOS
17-02-28 20:11:27.384 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:11:27.386 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:11:27.386 -08 000000010 INF: FPGA: Xmit TDIYARM3 139264 6437448 1 1\n
17-02-28 20:11:27.443 -08 000000106 INF: FPGA: Recv TDIYARM3
17-02-28 20:11:27.444 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:11:27.445 -08 000000010 INF: ===================TDI FPGA Arm===================
17-02-28 20:11:27.446 -08 000000010 INF: ======================================
17-02-28 20:11:27.447 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:27.447 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:27.448 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:27.448 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:27.449 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:27.449 -08 000000032 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:11:27.450 -08 000000064 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:11:27.450 -08 000000032 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:11:27.450 -08 000000032 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:11:27.450 -08 000000032 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:11:27.450 -08 000000064 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:11:27.450 -08 000000032 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:11:27.450 -08 000000064 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:11:27.450 -08 000000064 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:11:27.451 -08 000000064 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:11:27.818 -08 000000034 INF: FPGA: Recv EX2MV
17-02-28 20:11:27.818 -08 000000034 INF: FPGA: Recv EX1MV
17-02-28 20:11:27.818 -08 000000064 INF: Excitation Filter 1: Moved -107 steps in 368.2726 ms
17-02-28 20:11:27.818 -08 000000064 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.4809 ms
17-02-28 20:11:27.818 -08 000000064 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.5635 ms
17-02-28 20:11:27.818 -08 000000032 INF: Excitation Filter 2: Moved -107 steps in 368.5931 ms
17-02-28 20:11:27.818 -08 000000032 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.6942 ms
17-02-28 20:11:27.818 -08 000000032 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.7649 ms
17-02-28 20:11:27.819 -08 000000032 INF: ======================================
17-02-28 20:11:27.819 -08 000000064 INF: ======================================
17-02-28 20:11:27.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:27.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:27.822 -08 000000076 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:27.822 -08 000000052 INF: ===================FPGA Z Wait===================
17-02-28 20:11:27.822 -08 000000055 INF: ===================Camera TDI===================
17-02-28 20:11:27.822 -08 000000102 INF: ===================Move Y Motor without settling===================
17-02-28 20:11:27.822 -08 000000102 INF: Y Motor: Moving to 14.9261 mm @6.500 mm/sec, started at 64.5745 mm
17-02-28 20:11:27.822 -08 000000052 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:11:27.822 -08 000000102 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:11:27.822 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:27.822 -08 000000076 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:11:27.822 -08 000000055 INF: ===================Camera TDI, Parallel===================
17-02-28 20:11:27.823 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:11:27.823 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:11:27.825 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:27.825 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:27.825 -08 000000076 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:11:27.826 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:27.826 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:27.882 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:11:27.882 -08 000000102 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:11:27.882 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:27.890 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:11:27.890 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 1 of 5 seconds left===================
17-02-28 20:11:27.944 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:11:27.944 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:27.975 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:27.975 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:27.976 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:27.976 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:28.008 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:11:28.008 -08 000000102 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:28.008 -08 000000102 INF: Y Motor: Set target position to 992615 encoder counts
17-02-28 20:11:28.008 -08 000000102 INF: Y Motor: Xmit s r0xca 992615\r
17-02-28 20:11:28.070 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:11:28.070 -08 000000102 INF: Y Motor: Start the move command
17-02-28 20:11:28.070 -08 000000102 INF: Y Motor: Xmit t 1\r
17-02-28 20:11:28.125 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:28.125 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:28.126 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:28.126 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:28.131 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:11:28.131 -08 000000102 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:11:28.131 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:28.194 -08 000000066 INF: FPGA: Recv ZWAIT 
17-02-28 20:11:28.194 -08 000000052 INF: ======================================
17-02-28 20:11:28.258 -08 000000102 INF: Y Motor: Unshifted Position: 5894299
17-02-28 20:11:28.275 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:11:28.275 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:11:28.275 -08 000000058 INF: ===================Camera #0 Frame #5===================
17-02-28 20:11:28.276 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:11:28.276 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:11:28.276 -08 000000085 INF: ===================Camera #2 Frame #5===================
17-02-28 20:11:28.308 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:28.431 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:28.440 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:11:28.440 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:11:28.440 -08 000000058 INF: ===================Camera #0 Frame #11===================
17-02-28 20:11:28.442 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:11:28.442 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:11:28.442 -08 000000085 INF: ===================Camera #2 Frame #11===================
17-02-28 20:11:28.569 -08 000000102 INF: Y Motor: Unshifted Position: 5692145
17-02-28 20:11:28.608 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:11:28.608 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:11:28.608 -08 000000058 INF: ===================Camera #0 Frame #17===================
17-02-28 20:11:28.611 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:11:28.611 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:11:28.611 -08 000000085 INF: ===================Camera #2 Frame #17===================
17-02-28 20:11:28.619 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:28.745 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:28.776 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:11:28.776 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:11:28.776 -08 000000058 INF: ===================Camera #0 Frame #23===================
17-02-28 20:11:28.780 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:11:28.780 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:11:28.780 -08 000000085 INF: ===================Camera #2 Frame #23===================
17-02-28 20:11:28.882 -08 000000102 INF: Y Motor: Unshifted Position: 5488488
17-02-28 20:11:28.890 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:11:28.890 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:11:28.890 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:11:28.890 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:11:28.932 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:28.944 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:11:28.944 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:11:28.944 -08 000000058 INF: ===================Camera #0 Frame #29===================
17-02-28 20:11:28.949 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:11:28.949 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:11:28.949 -08 000000085 INF: ===================Camera #2 Frame #29===================
17-02-28 20:11:28.989 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:11:29.055 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:29.068 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`13440 (0x03)\r\n(0xFF)
17-02-28 20:11:29.068 -08 000000018 INF: Current Position of Pump is: 13440
17-02-28 20:11:29.112 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:11:29.112 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:11:29.112 -08 000000058 INF: ===================Camera #0 Frame #35===================
17-02-28 20:11:29.118 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:11:29.118 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:11:29.118 -08 000000085 INF: ===================Camera #2 Frame #36===================
17-02-28 20:11:29.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:11:29.193 -08 000000102 INF: Y Motor: Unshifted Position: 5286116
17-02-28 20:11:29.243 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:29.253 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`13440 (0x03)\r\n(0xFF)
17-02-28 20:11:29.253 -08 000000018 INF: Current Position of Pump is: 13440
17-02-28 20:11:29.253 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Dispensing port PortC===================
17-02-28 20:11:29.280 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:11:29.280 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:11:29.280 -08 000000058 INF: ===================Camera #0 Frame #42===================
17-02-28 20:11:29.290 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:11:29.290 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:11:29.290 -08 000000085 INF: ===================Camera #2 Frame #42===================
17-02-28 20:11:29.353 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V6400OD13440R\r
17-02-28 20:11:29.369 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:29.441 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:29.452 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:11:29.452 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:11:29.452 -08 000000058 INF: ===================Camera #0 Frame #48===================
17-02-28 20:11:29.459 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:11:29.459 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:11:29.459 -08 000000085 INF: ===================Camera #2 Frame #48===================
17-02-28 20:11:29.504 -08 000000102 INF: Y Motor: Unshifted Position: 5083957
17-02-28 20:11:29.541 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:29.554 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:29.622 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:11:29.622 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:11:29.622 -08 000000058 INF: ===================Camera #0 Frame #54===================
17-02-28 20:11:29.629 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:29.629 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:11:29.629 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:11:29.629 -08 000000085 INF: ===================Camera #2 Frame #54===================
17-02-28 20:11:29.680 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:29.792 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:11:29.792 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:11:29.792 -08 000000058 INF: ===================Camera #0 Frame #60===================
17-02-28 20:11:29.799 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:11:29.799 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:11:29.799 -08 000000085 INF: ===================Camera #2 Frame #61===================
17-02-28 20:11:29.818 -08 000000102 INF: Y Motor: Unshifted Position: 4879638
17-02-28 20:11:29.868 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:29.879 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:29.940 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:29.962 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:11:29.962 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:11:29.962 -08 000000058 INF: ===================Camera #0 Frame #67===================
17-02-28 20:11:29.973 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:11:29.973 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:11:29.973 -08 000000085 INF: ===================Camera #2 Frame #67===================
17-02-28 20:11:29.991 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:30.129 -08 000000102 INF: Y Motor: Unshifted Position: 4677494
17-02-28 20:11:30.135 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:11:30.135 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:11:30.135 -08 000000058 INF: ===================Camera #0 Frame #73===================
17-02-28 20:11:30.144 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:11:30.144 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:11:30.144 -08 000000085 INF: ===================Camera #2 Frame #73===================
17-02-28 20:11:30.179 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:30.190 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:30.254 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:30.305 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:30.305 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:11:30.305 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:11:30.305 -08 000000058 INF: ===================Camera #0 Frame #79===================
17-02-28 20:11:30.314 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:11:30.314 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:11:30.314 -08 000000085 INF: ===================Camera #2 Frame #80===================
17-02-28 20:11:30.440 -08 000000102 INF: Y Motor: Unshifted Position: 4475114
17-02-28 20:11:30.475 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:11:30.475 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:11:30.475 -08 000000058 INF: ===================Camera #0 Frame #86===================
17-02-28 20:11:30.489 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:11:30.489 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:11:30.489 -08 000000085 INF: ===================Camera #2 Frame #86===================
17-02-28 20:11:30.490 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:30.504 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:30.565 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:30.616 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:30.648 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:11:30.648 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:11:30.648 -08 000000058 INF: ===================Camera #0 Frame #92===================
17-02-28 20:11:30.659 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:11:30.659 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:11:30.659 -08 000000085 INF: ===================Camera #2 Frame #92===================
17-02-28 20:11:30.753 -08 000000102 INF: Y Motor: Unshifted Position: 4271021
17-02-28 20:11:30.803 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:30.815 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:30.818 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:11:30.818 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:11:30.818 -08 000000058 INF: ===================Camera #0 Frame #98===================
17-02-28 20:11:30.829 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:11:30.829 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:11:30.829 -08 000000085 INF: ===================Camera #2 Frame #99===================
17-02-28 20:11:30.878 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:30.929 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:30.988 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:11:30.988 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:11:30.988 -08 000000058 INF: ===================Camera #0 Frame #104===================
17-02-28 20:11:31.003 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:11:31.003 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:11:31.003 -08 000000085 INF: ===================Camera #2 Frame #105===================
17-02-28 20:11:31.064 -08 000000102 INF: Y Motor: Unshifted Position: 4069299
17-02-28 20:11:31.114 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:31.128 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:31.158 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:11:31.158 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:11:31.158 -08 000000058 INF: ===================Camera #0 Frame #111===================
17-02-28 20:11:31.174 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:11:31.174 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:11:31.174 -08 000000085 INF: ===================Camera #2 Frame #111===================
17-02-28 20:11:31.189 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:31.240 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:31.331 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:11:31.331 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:11:31.331 -08 000000058 INF: ===================Camera #0 Frame #117===================
17-02-28 20:11:31.344 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:11:31.344 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:11:31.344 -08 000000085 INF: ===================Camera #2 Frame #118===================
17-02-28 20:11:31.378 -08 000000102 INF: Y Motor: Unshifted Position: 3865201
17-02-28 20:11:31.428 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:31.439 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:31.500 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:31.501 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:11:31.501 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:11:31.501 -08 000000058 INF: ===================Camera #0 Frame #123===================
17-02-28 20:11:31.518 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:11:31.518 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:11:31.518 -08 000000085 INF: ===================Camera #2 Frame #124===================
17-02-28 20:11:31.551 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:31.670 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:11:31.670 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:11:31.670 -08 000000058 INF: ===================Camera #0 Frame #130===================
17-02-28 20:11:31.688 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:11:31.688 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:11:31.688 -08 000000085 INF: ===================Camera #2 Frame #130===================
17-02-28 20:11:31.689 -08 000000102 INF: Y Motor: Unshifted Position: 3663045
17-02-28 20:11:31.739 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:31.750 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:31.814 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:11:31.814 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:11:31.814 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:11:31.843 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:11:31.843 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:11:31.843 -08 000000058 INF: ===================Camera #0 Frame #136===================
17-02-28 20:11:31.858 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:11:31.858 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:11:31.858 -08 000000085 INF: ===================Camera #2 Frame #136===================
17-02-28 20:11:31.865 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:32.000 -08 000000102 INF: Y Motor: Unshifted Position: 3460689
17-02-28 20:11:32.013 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:11:32.013 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:11:32.013 -08 000000058 INF: ===================Camera #0 Frame #142===================
17-02-28 20:11:32.029 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:11:32.029 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:11:32.029 -08 000000085 INF: ===================Camera #2 Frame #143===================
17-02-28 20:11:32.050 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:32.176 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:32.183 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:11:32.183 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:11:32.183 -08 000000058 INF: ===================Camera #0 Frame #148===================
17-02-28 20:11:32.203 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:11:32.203 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:11:32.203 -08 000000085 INF: ===================Camera #2 Frame #149===================
17-02-28 20:11:32.314 -08 000000102 INF: Y Motor: Unshifted Position: 3258321
17-02-28 20:11:32.353 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:11:32.353 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:11:32.353 -08 000000058 INF: ===================Camera #0 Frame #155===================
17-02-28 20:11:32.364 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:32.373 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:11:32.373 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:11:32.373 -08 000000085 INF: ===================Camera #2 Frame #155===================
17-02-28 20:11:32.487 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:32.524 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:11:32.524 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:11:32.524 -08 000000058 INF: ===================Camera #0 Frame #161===================
17-02-28 20:11:32.542 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:11:32.542 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:11:32.542 -08 000000085 INF: ===================Camera #2 Frame #162===================
17-02-28 20:11:32.625 -08 000000102 INF: Y Motor: Unshifted Position: 3054224
17-02-28 20:11:32.675 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:32.692 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:11:32.692 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:11:32.692 -08 000000058 INF: ===================Camera #0 Frame #167===================
17-02-28 20:11:32.716 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:11:32.716 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:11:32.716 -08 000000085 INF: ===================Camera #2 Frame #168===================
17-02-28 20:11:32.801 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:32.862 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:11:32.862 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:11:32.862 -08 000000058 INF: ===================Camera #0 Frame #173===================
17-02-28 20:11:32.886 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:11:32.886 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:11:32.886 -08 000000085 INF: ===================Camera #2 Frame #174===================
17-02-28 20:11:32.914 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:11:32.938 -08 000000102 INF: Y Motor: Unshifted Position: 2852513
17-02-28 20:11:32.988 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:32.998 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:33.032 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:11:33.032 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:11:33.032 -08 000000058 INF: ===================Camera #0 Frame #180===================
17-02-28 20:11:33.057 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:11:33.057 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:11:33.057 -08 000000085 INF: ===================Camera #2 Frame #181===================
17-02-28 20:11:33.098 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:33.111 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:33.186 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:11:33.205 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:11:33.205 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:11:33.205 -08 000000058 INF: ===================Camera #0 Frame #186===================
17-02-28 20:11:33.231 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:11:33.231 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:11:33.231 -08 000000085 INF: ===================Camera #2 Frame #187===================
17-02-28 20:11:33.249 -08 000000102 INF: Y Motor: Unshifted Position: 2648412
17-02-28 20:11:33.299 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:33.375 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:11:33.375 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:11:33.375 -08 000000058 INF: ===================Camera #0 Frame #192===================
17-02-28 20:11:33.401 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:11:33.401 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:11:33.401 -08 000000085 INF: ===================Camera #2 Frame #193===================
17-02-28 20:11:33.425 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:33.436 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:11:33.497 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:11:33.497 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:11:33.497 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Closing shutoff valve===================
17-02-28 20:11:33.545 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:11:33.545 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:11:33.545 -08 000000058 INF: ===================Camera #0 Frame #199===================
17-02-28 20:11:33.560 -08 000000102 INF: Y Motor: Unshifted Position: 2446052
17-02-28 20:11:33.572 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:11:33.572 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:11:33.572 -08 000000085 INF: ===================Camera #2 Frame #200===================
17-02-28 20:11:33.610 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:33.717 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:11:33.717 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:11:33.717 -08 000000058 INF: ===================Camera #0 Frame #205===================
17-02-28 20:11:33.736 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:33.746 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:11:33.746 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:11:33.746 -08 000000085 INF: ===================Camera #2 Frame #206===================
17-02-28 20:11:33.874 -08 000000102 INF: Y Motor: Unshifted Position: 2243683
17-02-28 20:11:33.886 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:11:33.886 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:11:33.886 -08 000000058 INF: ===================Camera #0 Frame #211===================
17-02-28 20:11:33.917 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:11:33.917 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:11:33.917 -08 000000085 INF: ===================Camera #2 Frame #212===================
17-02-28 20:11:33.924 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:34.047 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:34.055 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:11:34.055 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:11:34.055 -08 000000058 INF: ===================Camera #0 Frame #217===================
17-02-28 20:11:34.088 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:11:34.088 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:11:34.088 -08 000000085 INF: ===================Camera #2 Frame #219===================
17-02-28 20:11:34.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:11:34.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:11:34.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:11:34.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:11:34.152 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:11:34.152 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°, FC temperature to 20°===================
17-02-28 20:11:34.185 -08 000000102 INF: Y Motor: Unshifted Position: 2039583
17-02-28 20:11:34.225 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:11:34.225 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:11:34.225 -08 000000058 INF: ===================Camera #0 Frame #224===================
17-02-28 20:11:34.235 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:34.262 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:11:34.262 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:11:34.262 -08 000000085 INF: ===================Camera #2 Frame #225===================
17-02-28 20:11:34.361 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:34.398 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:11:34.398 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:11:34.398 -08 000000058 INF: ===================Camera #0 Frame #230===================
17-02-28 20:11:34.401 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:11:34.402 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:11:34.403 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:11:34.403 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:11:34.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:11:34.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:11:34.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:11:34.405 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:11:34.405 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:11:34.406 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:11:34.433 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:11:34.433 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:11:34.433 -08 000000085 INF: ===================Camera #2 Frame #231===================
17-02-28 20:11:34.496 -08 000000102 INF: Y Motor: Unshifted Position: 1837433
17-02-28 20:11:34.546 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:34.566 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:11:34.566 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:11:34.566 -08 000000058 INF: ===================Camera #0 Frame #236===================
17-02-28 20:11:34.603 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:11:34.603 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:11:34.603 -08 000000085 INF: ===================Camera #2 Frame #238===================
17-02-28 20:11:34.672 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:34.736 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:11:34.736 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:11:34.736 -08 000000058 INF: ===================Camera #0 Frame #242===================
17-02-28 20:11:34.777 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:11:34.777 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:11:34.777 -08 000000085 INF: ===================Camera #2 Frame #244===================
17-02-28 20:11:34.809 -08 000000102 INF: Y Motor: Unshifted Position: 1635062
17-02-28 20:11:34.859 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:34.905 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:11:34.905 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:11:34.905 -08 000000058 INF: ===================Camera #0 Frame #249===================
17-02-28 20:11:34.948 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:11:34.948 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:11:34.948 -08 000000085 INF: ===================Camera #2 Frame #250===================
17-02-28 20:11:34.985 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:35.078 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:11:35.078 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:11:35.078 -08 000000058 INF: ===================Camera #0 Frame #255===================
17-02-28 20:11:35.119 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:11:35.119 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:11:35.119 -08 000000085 INF: ===================Camera #2 Frame #257===================
17-02-28 20:11:35.120 -08 000000102 INF: Y Motor: Unshifted Position: 1431608
17-02-28 20:11:35.170 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:35.248 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:11:35.248 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:11:35.248 -08 000000058 INF: ===================Camera #0 Frame #261===================
17-02-28 20:11:35.292 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:11:35.292 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:11:35.292 -08 000000085 INF: ===================Camera #2 Frame #263===================
17-02-28 20:11:35.296 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:35.418 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:11:35.418 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:11:35.418 -08 000000058 INF: ===================Camera #0 Frame #268===================
17-02-28 20:11:35.434 -08 000000102 INF: Y Motor: Unshifted Position: 1229226
17-02-28 20:11:35.461 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:11:35.461 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:11:35.461 -08 000000085 INF: ===================Camera #2 Frame #269===================
17-02-28 20:11:35.484 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:35.555 -08 000000030 INF: FPGA: Recv TDIYWAIT
17-02-28 20:11:35.555 -08 000000076 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:35.557 -08 000000076 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:11:35.558 -08 000000101 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:11:35.558 -08 000000039 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:11:35.558 -08 000000101 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:11:35.558 -08 000000101 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:11:35.558 -08 000000101 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:11:35.558 -08 000000039 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:11:35.558 -08 000000101 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:11:35.558 -08 000000039 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:11:35.558 -08 000000039 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:11:35.559 -08 000000039 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:11:35.590 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:11:35.590 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:11:35.590 -08 000000058 INF: ===================Camera #0 Frame #272===================
17-02-28 20:11:35.603 -08 000000058 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:11:35.604 -08 000000058 INF: ===================CameraTDI Cleanup===================
17-02-28 20:11:35.606 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:35.733 -08 000000058 INF: Camera #0 ReleaseBuffer
17-02-28 20:11:35.733 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:11:35.734 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:11:35.734 -08 000000085 INF: ===================Camera #2 Frame #272===================
17-02-28 20:11:35.734 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:11:35.744 -08 000000085 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:11:35.745 -08 000000102 INF: Y Motor: Unshifted Position: 1024919
17-02-28 20:11:35.745 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:11:35.763 -08 000000058 INF: ======================================
17-02-28 20:11:35.795 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:35.912 -08 000000085 INF: Camera #2 ReleaseBuffer
17-02-28 20:11:35.912 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:11:35.930 -08 000000030 INF: FPGA: Recv EX2MV
17-02-28 20:11:35.930 -08 000000030 INF: FPGA: Recv EX1MV
17-02-28 20:11:35.930 -08 000000039 INF: Excitation Filter 1: Moved 107 steps in 371.834 ms
17-02-28 20:11:35.930 -08 000000101 INF: Excitation Filter 2: Moved 107 steps in 372.0492 ms
17-02-28 20:11:35.930 -08 000000039 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.9793 ms
17-02-28 20:11:35.930 -08 000000039 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.091 ms
17-02-28 20:11:35.930 -08 000000101 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.1377 ms
17-02-28 20:11:35.930 -08 000000101 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.3092 ms
17-02-28 20:11:35.930 -08 000000039 INF: ======================================
17-02-28 20:11:35.930 -08 000000101 INF: ======================================
17-02-28 20:11:35.931 -08 000000076 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:35.932 -08 000000102 INF: Y Motor: Unshifted Position: 992614
17-02-28 20:11:35.932 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:11:35.932 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:35.933 -08 000000076 INF: ======================================
17-02-28 20:11:35.946 -08 000000085 INF: ======================================
17-02-28 20:11:35.947 -08 000000055 INF: ===================Camera TDI===================
17-02-28 20:11:35.948 -08 000000055 INF: ======================================
17-02-28 20:11:35.994 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:11:35.994 -08 000000102 INF: Y Motor: Moved to 14.9261 after 7863 ms
17-02-28 20:11:35.994 -08 000000102 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:11:36.056 -08 000000102 INF: Y Motor: Recv v 4097\r
17-02-28 20:11:36.056 -08 000000102 INF: Y Motor: Status After move finished OK:
17-02-28 20:11:36.056 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:36.120 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:11:36.120 -08 000000102 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:36.120 -08 000000102 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:11:36.182 -08 000000102 INF: Y Motor: Recv v 134217728\r
17-02-28 20:11:36.182 -08 000000102 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:11:36.182 -08 000000102 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:11:36.182 -08 000000102 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:11:36.244 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:11:36.244 -08 000000102 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:11:36.244 -08 000000102 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:11:36.244 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:36.306 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:11:36.306 -08 000000102 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:11:36.306 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:36.371 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:11:36.371 -08 000000102 INF: ======================================
17-02-28 20:11:36.372 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:36.373 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:36.374 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:36.374 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:11:36.430 -08 000000010 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:11:36.430 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:11:36.492 -08 000000053 INF: FPGA: Recv TDIYERD 1492615
17-02-28 20:11:36.492 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:11:36.556 -08 000000083 INF: FPGA: Recv ZADCR 22034
17-02-28 20:11:36.556 -08 000000042 INF: At scan end Y pos = 14.926 and Z pos = -0.085. Y moved -48.539 mm
17-02-28 20:11:36.556 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:11:36.618 -08 000000100 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:11:36.618 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:11:36.618 -08 000000042 INF: TDIScan finished after 12574.8021 ms
17-02-28 20:11:36.618 -08 000000042 INF: Image[0]: Y should trigger at 63.465 mm, 2nd row was at 64.374 mm (error = 0.909 mm)
17-02-28 20:11:36.618 -08 000000042 INF: Image[2]: Y should trigger at 63.465 mm, 2nd row was at 64.374 mm (error = 0.909 mm)
17-02-28 20:11:36.620 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:36.654 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.536 um
17-02-28 20:11:36.654 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:36.655 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:11:36.680 -08 000000044 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:11:36.680 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:36.681 -08 000000039 INF: ===================Dither Clean Up Command===================
17-02-28 20:11:36.681 -08 000000055 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:11:36.681 -08 000000047 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:11:36.681 -08 000000069 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:11:36.682 -08 000000069 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:11:36.682 -08 000000055 INF: ======================================
17-02-28 20:11:36.682 -08 000000069 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:11:36.682 -08 000000047 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:11:36.682 -08 000000047 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:11:36.682 -08 000000098 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:11:36.682 -08 000000101 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:11:36.682 -08 000000101 INF: ======================================
17-02-28 20:11:36.683 -08 000000098 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:11:36.741 -08 000000091 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:36.741 -08 000000091 INF: FPGA: Recv ZSEL 
17-02-28 20:11:36.741 -08 000000098 INF: FPGA: Xmit ZDACW 26669\n
17-02-28 20:11:36.741 -08 000000069 INF: ======================================
17-02-28 20:11:36.743 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:11:36.743 -08 000000047 INF: ======================================
17-02-28 20:11:36.803 -08 000000032 INF: FPGA: Recv ZDACW 
17-02-28 20:11:36.803 -08 000000098 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:11:36.803 -08 000000098 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:11:36.868 -08 000000051 INF: FPGA: Recv TDIBB
17-02-28 20:11:36.868 -08 000000098 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:11:36.869 -08 000000098 INF: ======================================
17-02-28 20:11:36.870 -08 000000039 INF: ======================================
17-02-28 20:11:36.871 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:36.872 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:11:36.872 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:36.872 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:11:36.872 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:36.873 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:11:36.873 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:36.873 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:11:36.873 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:36.873 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827===================
17-02-28 20:11:36.873 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827===================
17-02-28 20:11:36.874 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module..., Waiting for image analysis===================
17-02-28 20:11:36.874 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:11:36.874 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:11:36.874 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827===================
17-02-28 20:11:36.897 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:11:36.898 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:36.898 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:36.898 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:36.898 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:11:36.899 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:11:36.899 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface===================
17-02-28 20:11:36.963 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2206 Request: {"Cycle":2,"Lane":7,"Tile":2206,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF220","HCSMMF260","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:36.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:36.981 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:36.981 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:11:36.981 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:11:37.030 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2207 Request: {"Cycle":2,"Lane":7,"Tile":2207,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF196","HCSMMF224","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.032 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2208 Request: {"Cycle":2,"Lane":7,"Tile":2208,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF235","HCSMMF183","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.088 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:11:37.088 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:37.088 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:11:37.089 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:37.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:37.090 -08 000000039 INF: ===================Move Tilt Motor 1===================
17-02-28 20:11:37.091 -08 000000054 INF: ===================Move Tilt Motor 3===================
17-02-28 20:11:37.091 -08 000000039 INF: Tilt Motor 1: Moving to 4.9785 mm, started at 5.0005 mm, delta = -0.0220 mm
17-02-28 20:11:37.091 -08 000000110 INF: ===================Move Tilt Motor 2===================
17-02-28 20:11:37.091 -08 000000054 INF: Tilt Motor 3: Moving to 5.3996 mm, started at 5.3393 mm, delta = 0.0603 mm
17-02-28 20:11:37.091 -08 000000110 INF: Tilt Motor 2: Moving to 5.4532 mm, started at 5.3939 mm, delta = 0.0592 mm
17-02-28 20:11:37.091 -08 000000039 INF: FPGA: Xmit T1RD\n
17-02-28 20:11:37.092 -08 000000054 INF: FPGA: Xmit T3RD\n
17-02-28 20:11:37.094 -08 000000110 INF: FPGA: Xmit T2RD\n
17-02-28 20:11:37.166 -08 000000055 INF: FPGA: Recv T1RD 19687
17-02-28 20:11:37.166 -08 000000055 INF: FPGA: Recv T3RD 21019
17-02-28 20:11:37.166 -08 000000055 INF: FPGA: Recv T2RD 21236
17-02-28 20:11:37.166 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2211 Request: {"Cycle":2,"Lane":7,"Tile":2211,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF204","HCSMMF268","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.166 -08 000000039 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:11:37.166 -08 000000039 INF: Tilt Motor 1: Moving to 19600 encoder counts
17-02-28 20:11:37.166 -08 000000039 INF: FPGA: Xmit T1MOVETO 19600\n
17-02-28 20:11:37.166 -08 000000110 INF: Tilt Motor 2: Encoder: at motor step 3539 + 2/6
17-02-28 20:11:37.166 -08 000000110 INF: Tilt Motor 2: Moving to 21469 encoder counts
17-02-28 20:11:37.166 -08 000000054 INF: Tilt Motor 3: Encoder: at motor step 3503 + 1/6
17-02-28 20:11:37.166 -08 000000054 INF: Tilt Motor 3: Moving to 21258 encoder counts
17-02-28 20:11:37.167 -08 000000054 INF: FPGA: Xmit T3MOVETO 21258\n
17-02-28 20:11:37.167 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2201 Request: {"Cycle":2,"Lane":7,"Tile":2201,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF223","HCSMMF213","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.169 -08 000000110 INF: FPGA: Xmit T2MOVETO 21469\n
17-02-28 20:11:37.169 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2210 Request: {"Cycle":2,"Lane":7,"Tile":2210,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF249","HCSMMF284","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.170 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2202 Request: {"Cycle":2,"Lane":7,"Tile":2202,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF184","HCSMMF181","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.171 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2213 Request: {"Cycle":2,"Lane":7,"Tile":2213,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF227","HCSMMF209","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.172 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2204 Request: {"Cycle":2,"Lane":7,"Tile":2204,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF286","HCSMMF271","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.173 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2203 Request: {"Cycle":2,"Lane":7,"Tile":2203,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF236","HCSMMF237","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.173 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2214 Request: {"Cycle":2,"Lane":7,"Tile":2214,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF261","HCSMMF240","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.174 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2205 Request: {"Cycle":2,"Lane":7,"Tile":2205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF200","HCSMMF222","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.175 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2209 Request: {"Cycle":2,"Lane":7,"Tile":2209,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF228","HCSMMF197","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.175 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2215 Request: {"Cycle":2,"Lane":7,"Tile":2215,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF226","HCSMMF259","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.176 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2216 Request: {"Cycle":2,"Lane":7,"Tile":2216,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF225","HCSMMF245","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.177 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2212 Request: {"Cycle":2,"Lane":7,"Tile":2212,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF248","HCSMMF238","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.178 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2217 Request: {"Cycle":2,"Lane":7,"Tile":2217,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF218","HCSMMF282","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.178 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2218 Request: {"Cycle":2,"Lane":7,"Tile":2218,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF267","HCSMMF242","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.179 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2223 Request: {"Cycle":2,"Lane":7,"Tile":2223,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF272","HCSMMF214","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.180 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2222 Request: {"Cycle":2,"Lane":7,"Tile":2222,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF278","HCSMMF256","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.181 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2224 Request: {"Cycle":2,"Lane":7,"Tile":2224,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF250","HCSMMF280","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.182 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2220 Request: {"Cycle":2,"Lane":7,"Tile":2220,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF192","HCSMMF265","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.183 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2219 Request: {"Cycle":2,"Lane":7,"Tile":2219,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF198","HCSMMF177","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.184 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2225 Request: {"Cycle":2,"Lane":7,"Tile":2225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF244","HCSMMF241","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.185 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2228 Request: {"Cycle":2,"Lane":7,"Tile":2228,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF258","HCSMMF270","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.186 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2227 Request: {"Cycle":2,"Lane":7,"Tile":2227,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF193","HCSMMF279","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.187 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2221 Request: {"Cycle":2,"Lane":7,"Tile":2221,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF255","HCSMMF287","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.188 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 2 Tile: 2226 Request: {"Cycle":2,"Lane":7,"Tile":2226,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF234","HCSMMF233","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:37.190 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:37.197 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:11:37.289 -08 000000084 INF: FPGA: Recv T1MOVETO 14
17-02-28 20:11:37.289 -08 000000039 INF: Tilt Motor 1: To move from 5.000 to 4.978 (-0.022 mm) should take 14 steps, but required 14 steps (0.021 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:11:37.289 -08 000000039 INF: FPGA: Xmit T1RD\n
17-02-28 20:11:37.307 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:37.308 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:11:37.351 -08 000000076 INF: FPGA: Recv T1RD 19603
17-02-28 20:11:37.351 -08 000000076 INF: FPGA: Recv T3MOVETO 39
17-02-28 20:11:37.351 -08 000000076 INF: FPGA: Recv T2MOVETO 38
17-02-28 20:11:37.351 -08 000000110 INF: Tilt Motor 2: To move from 5.394 to 5.453 (0.059 mm) should take 39 steps, but required 38 steps (0.058 mm). Slippage = -0.002 mm (-0.03%)
17-02-28 20:11:37.351 -08 000000054 INF: Tilt Motor 3: To move from 5.339 to 5.400 (0.060 mm) should take 40 steps, but required 39 steps (0.059 mm). Slippage = -0.002 mm (-0.03%)
17-02-28 20:11:37.351 -08 000000110 INF: FPGA: Xmit T2RD\n
17-02-28 20:11:37.351 -08 000000039 INF: Tilt Motor 1: Encoder: at motor step 3267 + 1/6
17-02-28 20:11:37.352 -08 000000054 INF: FPGA: Xmit T3RD\n
17-02-28 20:11:37.354 -08 000000039 INF: FPGA: Xmit T1RD\n
17-02-28 20:11:37.356 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:37.363 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:11:37.413 -08 000000102 INF: FPGA: Recv T2RD 21464
17-02-28 20:11:37.413 -08 000000102 INF: FPGA: Recv T3RD 21255
17-02-28 20:11:37.413 -08 000000102 INF: FPGA: Recv T1RD 19603
17-02-28 20:11:37.413 -08 000000039 INF: Tilt Motor 1: Encoder: at motor step 3267 + 1/6
17-02-28 20:11:37.413 -08 000000039 INF: FPGA: Xmit T1RD\n
17-02-28 20:11:37.413 -08 000000054 INF: Tilt Motor 3: Encoder: at motor step 3542 + 3/6
17-02-28 20:11:37.413 -08 000000110 INF: Tilt Motor 2: Encoder: at motor step 3577 + 2/6
17-02-28 20:11:37.414 -08 000000110 INF: FPGA: Xmit T2RD\n
17-02-28 20:11:37.416 -08 000000054 INF: FPGA: Xmit T3RD\n
17-02-28 20:11:37.463 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:37.469 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:11:37.477 -08 000000091 INF: FPGA: Recv T1RD 19603
17-02-28 20:11:37.478 -08 000000091 INF: FPGA: Recv T2RD 21464
17-02-28 20:11:37.478 -08 000000091 INF: FPGA: Recv T3RD 21255
17-02-28 20:11:37.478 -08 000000054 INF: Tilt Motor 3: Encoder: at motor step 3542 + 3/6
17-02-28 20:11:37.478 -08 000000039 INF: Tilt Motor 1: Encoder: at motor step 3267 + 1/6
17-02-28 20:11:37.478 -08 000000110 INF: Tilt Motor 2: Encoder: at motor step 3577 + 2/6
17-02-28 20:11:37.478 -08 000000054 INF: FPGA: Xmit T3RD\n
17-02-28 20:11:37.478 -08 000000039 INF: Tilt Motor 1: After move to 4.9785, error = 0.0007, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:11:37.478 -08 000000039 INF: Tilt Motor 1: Moved to 4.9792 after 387.406 ms
17-02-28 20:11:37.478 -08 000000039 INF: ======================================
17-02-28 20:11:37.479 -08 000000110 INF: FPGA: Xmit T2RD\n
17-02-28 20:11:37.537 -08 000000044 INF: FPGA: Recv T3RD 21255
17-02-28 20:11:37.537 -08 000000044 INF: FPGA: Recv T2RD 21464
17-02-28 20:11:37.537 -08 000000054 INF: Tilt Motor 3: Encoder: at motor step 3542 + 3/6
17-02-28 20:11:37.537 -08 000000054 INF: Tilt Motor 3: After move to 5.3996, error = -0.0008, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:11:37.537 -08 000000110 INF: Tilt Motor 2: Encoder: at motor step 3577 + 2/6
17-02-28 20:11:37.537 -08 000000054 INF: Tilt Motor 3: Moved to 5.3988 after 446.5089 ms
17-02-28 20:11:37.537 -08 000000110 INF: Tilt Motor 2: After move to 5.4532, error = -0.0013, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:11:37.537 -08 000000110 INF: Tilt Motor 2: Moved to 5.4519 after 446.5036 ms
17-02-28 20:11:37.538 -08 000000054 INF: ======================================
17-02-28 20:11:37.538 -08 000000110 INF: ======================================
17-02-28 20:11:37.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:37.540 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:37.540 -08 000000042 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=4.97847296731801, m2=5.45318979375872, m3=5.39959579375872
17-02-28 20:11:37.546 -08 000000042 INF: Transformed XStagePosition from 88.54063 mm to 88.5406341552734 mm.
17-02-28 20:11:37.555 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:11:37.555 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:11:37.555 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:11:37.555 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:11:37.556 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:11:37.559 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:11:37.559 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:11:37.559 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:11:37.599 -08 000000047 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:37.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:11:37.600 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:11:37.600 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1017 mm
17-02-28 20:11:37.600 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:11:37.613 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:37.619 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:11:37.661 -08 000000081 INF: FPGA: Recv ZTRG 
17-02-28 20:11:37.661 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:11:37.726 -08 000000105 INF: FPGA: Recv ZYT 
17-02-28 20:11:37.726 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:11:37.726 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:11:37.744 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:37.791 -08 000000068 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:11:37.791 -08 000000068 INF: FPGA: Recv ZMV 
17-02-28 20:11:37.791 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:11:37.791 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 64.924 ms
17-02-28 20:11:37.791 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:11:37.849 -08 000000100 INF: FPGA: Recv ZDACR 60292
17-02-28 20:11:37.849 -08 000000042 INF: Z Motor: MoveAndTrigger took 249.573 ms w/comms
17-02-28 20:11:37.849 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:11:37.849 -08 000000042 INF: Z Motor: MoveAbsStepped took 249.754 ms
17-02-28 20:11:37.850 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:11:37.850 -08 000000042 INF: Transformed XStagePosition from 88.54063 mm to 88.5406341552734 mm.
17-02-28 20:11:37.859 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:11:37.859 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:11:37.859 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:11:37.859 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:11:37.859 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:11:37.911 -08 000000104 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:37.922 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:11:37.922 -08 000000042 INF: Transformed XStagePosition from 88.54063 mm to 88.5406341552734 mm.
17-02-28 20:11:37.930 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:11:37.930 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:11:37.931 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:11:37.933 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:37.933 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:11:37.933 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:37.933 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = H_1
17-02-28 20:11:37.933 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:37.934 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:37.935 -08 000000085 INF: ===================Move X,Y===================
17-02-28 20:11:37.935 -08 000000052 INF: ===================MoveEmissionFilters===================
17-02-28 20:11:37.936 -08 000000085 INF: ===================Move X,Y, Parallel===================
17-02-28 20:11:37.936 -08 000000084 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:11:37.936 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:11:37.936 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:11:37.936 -08 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:11:37.936 -08 000000045 INF: ===================Move X Motor without settling===================
17-02-28 20:11:37.936 -08 000000054 INF: ===================Move Y Motor without settling===================
17-02-28 20:11:37.937 -08 000000045 INF: X Motor: Xmit PR VM\n
17-02-28 20:11:37.937 -08 000000054 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9261 mm
17-02-28 20:11:37.937 -08 000000084 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:11:37.937 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:11:37.937 -08 000000054 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:11:37.937 -08 000000054 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:37.937 -08 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:11:37.937 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:11:37.938 -08 000000051 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:11:37.938 -08 000000039 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:11:37.938 -08 000000010 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:11:37.938 -08 000000091 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:11:37.938 -08 000000044 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:11:37.938 -08 000000098 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:11:37.938 -08 000000109 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:11:37.938 -08 000000102 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:11:37.938 -08 000000051 INF: ======================================
17-02-28 20:11:37.938 -08 000000091 INF: ======================================
17-02-28 20:11:37.939 -08 000000109 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:11:37.939 -08 000000102 INF: ======================================
17-02-28 20:11:37.939 -08 000000109 INF: ======================================
17-02-28 20:11:37.939 -08 000000039 INF: ======================================
17-02-28 20:11:37.939 -08 000000098 INF: ======================================
17-02-28 20:11:37.940 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:11:37.941 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:11:37.941 -08 000000032 INF: ======================================
17-02-28 20:11:37.941 -08 000000010 INF: ======================================
17-02-28 20:11:37.941 -08 000000044 INF: ======================================
17-02-28 20:11:37.942 -08 000000062 INF: ======================================
17-02-28 20:11:37.943 -08 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:11:37.943 -08 000000084 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:11:37.944 -08 000000081 INF: ======================================
17-02-28 20:11:37.944 -08 000000084 INF: ======================================
17-02-28 20:11:37.945 -08 000000052 INF: ======================================
17-02-28 20:11:37.975 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:11:37.975 -08 000000054 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:11:37.975 -08 000000054 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:37.975 -08 000000045 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:11:37.975 -08 000000045 INF: X Motor: Xmit PR VI\n
17-02-28 20:11:38.040 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:11:38.040 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:38.040 -08 000000045 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:11:38.040 -08 000000045 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:11:38.040 -08 000000045 INF: X Motor: Moving to 88.5406 mm @15.000 mm/sec, started at 86.3022 mm
17-02-28 20:11:38.040 -08 000000045 INF: X Motor: Xmit MA 12100\n
17-02-28 20:11:38.043 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:11:38.102 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:11:38.102 -08 000000054 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:38.102 -08 000000045 INF: X Motor: Recv MA 12100\r\n>
17-02-28 20:11:38.102 -08 000000054 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:11:38.102 -08 000000054 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:11:38.102 -08 000000045 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:11:38.166 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:11:38.166 -08 000000054 INF: Y Motor: Start the move command
17-02-28 20:11:38.166 -08 000000054 INF: Y Motor: Xmit t 1\r
17-02-28 20:11:38.226 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:11:38.226 -08 000000054 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:11:38.226 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:38.351 -08 000000054 INF: Y Motor: Unshifted Position: 1074054
17-02-28 20:11:38.401 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:38.525 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:38.664 -08 000000054 INF: Y Motor: Unshifted Position: 1771776
17-02-28 20:11:38.714 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:38.726 -08 000000045 INF: X Motor: Xmit PR ER\n
17-02-28 20:11:38.789 -08 000000045 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:11:38.789 -08 000000045 INF: X Motor: Moved to 88.5410 after 687 ms
17-02-28 20:11:38.789 -08 000000045 INF: ======================================
17-02-28 20:11:38.838 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:38.975 -08 000000054 INF: Y Motor: Unshifted Position: 2555132
17-02-28 20:11:39.025 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:39.151 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:39.287 -08 000000054 INF: Y Motor: Unshifted Position: 3337571
17-02-28 20:11:39.337 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:39.461 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:39.600 -08 000000054 INF: Y Motor: Unshifted Position: 4113486
17-02-28 20:11:39.650 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:39.774 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:39.912 -08 000000054 INF: Y Motor: Unshifted Position: 4895916
17-02-28 20:11:39.962 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:40.085 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:40.224 -08 000000054 INF: Y Motor: Unshifted Position: 5673197
17-02-28 20:11:40.274 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:40.398 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:40.534 -08 000000054 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:11:40.534 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:11:40.534 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:40.596 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:11:40.596 -08 000000054 INF: Y Motor: Moved to 64.5335 after 2370 ms
17-02-28 20:11:40.596 -08 000000054 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:11:40.658 -08 000000054 INF: Y Motor: Recv v 4096\r
17-02-28 20:11:40.658 -08 000000054 INF: Y Motor: Status After move finished OK:
17-02-28 20:11:40.658 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:40.724 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:11:40.724 -08 000000054 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:40.724 -08 000000054 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:11:40.783 -08 000000054 INF: Y Motor: Recv v 402653184\r
17-02-28 20:11:40.783 -08 000000054 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:11:40.783 -08 000000054 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:11:40.783 -08 000000054 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:11:40.849 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:11:40.849 -08 000000054 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:11:40.849 -08 000000054 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:11:40.849 -08 000000054 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:40.909 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:11:40.909 -08 000000054 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:11:40.909 -08 000000054 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:40.970 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:11:40.970 -08 000000054 INF: ======================================
17-02-28 20:11:40.971 -08 000000085 INF: ===================Move X,Y===================
17-02-28 20:11:40.972 -08 000000085 INF: ======================================
17-02-28 20:11:40.973 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:40.974 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:40.974 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:11:40.974 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:11:41.036 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:11:41.036 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:11:41.093 -08 000000062 INF: FPGA: Recv ZFREQCL
17-02-28 20:11:41.093 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:11:41.093 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:41.094 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:11:41.158 -08 000000105 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:11:41.158 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:11:41.159 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:41.159 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:41.160 -08 000000110 INF: ===================Set YMotor gains for scans===================
17-02-28 20:11:41.160 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:11:41.160 -08 000000110 INF: ======================================
17-02-28 20:11:41.161 -08 000000058 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:11:41.161 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:11:41.163 -08 000000058 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:11:41.163 -08 000000058 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:11:41.163 -08 000000058 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:11:41.221 -08 000000054 INF: FPGA: Recv TDIYPOS
17-02-28 20:11:41.221 -08 000000058 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:11:41.223 -08 000000058 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:11:41.223 -08 000000058 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:11:41.282 -08 000000068 INF: FPGA: Recv TDIYARM2
17-02-28 20:11:41.283 -08 000000058 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:11:41.284 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:11:41.285 -08 000000058 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:11:41.286 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:11:41.287 -08 000000058 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:11:41.288 -08 000000058 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:11:41.289 -08 000000058 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:11:41.655 -08 000000058 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:11:41.656 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:11:41.656 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:11:41.670 -08 000000058 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:11:41.672 -08 000000058 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:11:42.056 -08 000000058 INF: Camera #2 AttachBuffer (imageDataPtr = 53822025616 imgPtr = 53895782648 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:11:42.056 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:11:42.056 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:11:42.071 -08 000000058 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:11:42.074 -08 000000058 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:11:42.075 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:11:42.076 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:42.077 -08 000000058 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:11:42.077 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:42.079 -08 000000058 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:11:42.079 -08 000000058 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:11:42.079 -08 000000058 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:11:42.079 -08 000000058 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:11:42.094 -08 000000081 INF: FPGA: Recv ZYT 
17-02-28 20:11:42.094 -08 000000058 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:11:42.094 -08 000000058 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:11:42.156 -08 000000100 INF: FPGA: Recv ZARM
17-02-28 20:11:42.156 -08 000000058 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.3461 ms
17-02-28 20:11:42.156 -08 000000058 INF: Z Motor: ArmAbsStepped took 77.1654 ms
17-02-28 20:11:42.157 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:42.158 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:11:42.159 -08 000000058 INF: ======================================
17-02-28 20:11:42.160 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:42.161 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:42.161 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:42.162 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:42.162 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:42.163 -08 000000085 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:11:42.163 -08 000000091 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:11:42.163 -08 000000085 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:11:42.163 -08 000000085 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:11:42.163 -08 000000085 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:11:42.163 -08 000000085 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:11:42.163 -08 000000091 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:11:42.163 -08 000000091 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:11:42.164 -08 000000091 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:11:42.166 -08 000000091 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:11:42.528 -08 000000030 INF: FPGA: Recv EX1MV
17-02-28 20:11:42.528 -08 000000030 INF: FPGA: Recv EX2MV
17-02-28 20:11:42.528 -08 000000091 INF: Excitation Filter 2: Moved -107 steps in 364.3995 ms
17-02-28 20:11:42.528 -08 000000085 INF: Excitation Filter 1: Moved -107 steps in 364.5888 ms
17-02-28 20:11:42.528 -08 000000085 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 364.7633 ms
17-02-28 20:11:42.528 -08 000000091 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 364.5208 ms
17-02-28 20:11:42.528 -08 000000085 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 364.8352 ms
17-02-28 20:11:42.528 -08 000000091 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 364.7283 ms
17-02-28 20:11:42.529 -08 000000085 INF: ======================================
17-02-28 20:11:42.529 -08 000000091 INF: ======================================
17-02-28 20:11:42.530 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:42.531 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:42.532 -08 000000102 INF: ===================Serial===================
17-02-28 20:11:42.532 -08 000000054 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:42.532 -08 000000062 INF: ===================Move Y Motor without settling===================
17-02-28 20:11:42.532 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:11:42.532 -08 000000062 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:11:42.533 -08 000000062 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:11:42.533 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:42.533 -08 000000102 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:11:42.533 -08 000000054 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:11:42.533 -08 000000102 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:11:42.533 -08 000000090 INF: ===================Camera TDI, Parallel===================
17-02-28 20:11:42.534 -08 000000054 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:11:42.534 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:11:42.534 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:11:42.535 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:42.535 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:42.536 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:42.536 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:42.596 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:11:42.596 -08 000000062 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:11:42.596 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:42.655 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:11:42.655 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:42.685 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:42.685 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:42.686 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:42.686 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:42.720 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:11:42.720 -08 000000062 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:42.720 -08 000000062 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:11:42.720 -08 000000062 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:11:42.782 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:11:42.782 -08 000000062 INF: Y Motor: Start the move command
17-02-28 20:11:42.782 -08 000000062 INF: Y Motor: Xmit t 1\r
17-02-28 20:11:42.835 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:42.835 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:42.836 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:42.836 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:42.844 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:11:42.844 -08 000000062 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:11:42.844 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:42.969 -08 000000062 INF: Y Motor: Unshifted Position: 5935281
17-02-28 20:11:42.985 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:42.985 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:42.986 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:42.986 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:43.019 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:43.135 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:11:43.135 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:11:43.135 -08 000000098 INF: ===================Camera #0 Frame #1===================
17-02-28 20:11:43.136 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:11:43.136 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:11:43.136 -08 000000100 INF: ===================Camera #2 Frame #1===================
17-02-28 20:11:43.143 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:43.279 -08 000000062 INF: Y Motor: Unshifted Position: 5888625
17-02-28 20:11:43.288 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:11:43.288 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2
17-02-28 20:11:43.288 -08 000000098 INF: ===================Camera #0 Frame #2===================
17-02-28 20:11:43.289 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:11:43.289 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:11:43.289 -08 000000100 INF: ===================Camera #2 Frame #3===================
17-02-28 20:11:43.329 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:43.441 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:11:43.441 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:11:43.441 -08 000000098 INF: ===================Camera #0 Frame #4===================
17-02-28 20:11:43.446 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:11:43.446 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:11:43.446 -08 000000100 INF: ===================Camera #2 Frame #4===================
17-02-28 20:11:43.456 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:43.592 -08 000000062 INF: Y Motor: Unshifted Position: 5841668
17-02-28 20:11:43.597 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:11:43.597 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:11:43.597 -08 000000098 INF: ===================Camera #0 Frame #5===================
17-02-28 20:11:43.599 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:11:43.599 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:11:43.599 -08 000000100 INF: ===================Camera #2 Frame #5===================
17-02-28 20:11:43.642 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:43.652 -08 000000083 INF: FPGA: Recv ZWAIT 
17-02-28 20:11:43.652 -08 000000083 INF: FPGA: Recv TDIYWAIT
17-02-28 20:11:43.652 -08 000000054 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:43.652 -08 000000102 INF: ===================Serial===================
17-02-28 20:11:43.654 -08 000000054 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:11:43.654 -08 000000102 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:11:43.654 -08 000000102 INF: ===================Serial===================
17-02-28 20:11:43.655 -08 000000076 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:11:43.655 -08 000000101 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:11:43.655 -08 000000076 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:11:43.655 -08 000000076 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:11:43.655 -08 000000076 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:11:43.655 -08 000000076 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:11:43.655 -08 000000101 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:11:43.655 -08 000000101 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:11:43.655 -08 000000101 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:11:43.655 -08 000000102 INF: ======================================
17-02-28 20:11:43.656 -08 000000101 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:11:43.750 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:11:43.750 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:11:43.750 -08 000000098 INF: ===================Camera #0 Frame #6===================
17-02-28 20:11:43.752 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:11:43.752 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:11:43.752 -08 000000100 INF: ===================Camera #2 Frame #6===================
17-02-28 20:11:43.753 -08 000000098 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:11:43.754 -08 000000098 INF: ===================CameraTDI Cleanup===================
17-02-28 20:11:43.755 -08 000000100 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:11:43.756 -08 000000100 INF: ===================CameraTDI Cleanup===================
17-02-28 20:11:43.766 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:43.777 -08 000000098 INF: Camera #0 ReleaseBuffer
17-02-28 20:11:43.777 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:11:43.778 -08 000000098 INF: ======================================
17-02-28 20:11:43.803 -08 000000100 INF: Camera #2 ReleaseBuffer
17-02-28 20:11:43.803 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:11:43.804 -08 000000100 INF: ======================================
17-02-28 20:11:43.806 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:11:43.807 -08 000000090 INF: ======================================
17-02-28 20:11:43.905 -08 000000062 INF: Y Motor: Unshifted Position: 5797055
17-02-28 20:11:43.955 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:44.028 -08 000000090 INF: FPGA: Recv EX1MV
17-02-28 20:11:44.028 -08 000000090 INF: FPGA: Recv EX2MV
17-02-28 20:11:44.028 -08 000000101 INF: Excitation Filter 2: Moved 107 steps in 372.7384 ms
17-02-28 20:11:44.028 -08 000000101 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.8347 ms
17-02-28 20:11:44.028 -08 000000101 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.94 ms
17-02-28 20:11:44.028 -08 000000076 INF: Excitation Filter 1: Moved 107 steps in 372.9623 ms
17-02-28 20:11:44.028 -08 000000076 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.1639 ms
17-02-28 20:11:44.028 -08 000000076 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.2346 ms
17-02-28 20:11:44.028 -08 000000101 INF: ======================================
17-02-28 20:11:44.028 -08 000000076 INF: ======================================
17-02-28 20:11:44.030 -08 000000054 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:44.031 -08 000000054 INF: ======================================
17-02-28 20:11:44.092 -08 000000062 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:11:44.092 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:11:44.092 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:44.154 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:11:44.154 -08 000000062 INF: Y Motor: Moved to 62.9704 after 1310 ms
17-02-28 20:11:44.154 -08 000000062 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:11:44.216 -08 000000062 INF: Y Motor: Recv v 4097\r
17-02-28 20:11:44.216 -08 000000062 INF: Y Motor: Status After move finished OK:
17-02-28 20:11:44.216 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:44.278 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:11:44.278 -08 000000062 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:44.278 -08 000000062 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:11:44.340 -08 000000062 INF: Y Motor: Recv v 134217728\r
17-02-28 20:11:44.340 -08 000000062 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:11:44.340 -08 000000062 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:11:44.340 -08 000000062 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:11:44.402 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:11:44.402 -08 000000062 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:11:44.402 -08 000000062 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:11:44.402 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:44.468 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:11:44.468 -08 000000062 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:11:44.468 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:44.527 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:11:44.527 -08 000000062 INF: ======================================
17-02-28 20:11:44.528 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:44.529 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:11:44.530 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:44.530 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:11:44.587 -08 000000034 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:11:44.587 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:11:44.652 -08 000000090 INF: FPGA: Recv TDIYERD 6297042
17-02-28 20:11:44.652 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:11:44.714 -08 000000055 INF: FPGA: Recv ZADCR 2428
17-02-28 20:11:44.714 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:11:44.714 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:11:44.777 -08 000000062 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:11:44.777 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:11:44.777 -08 000000042 INF: TDIScan finished after 6855.3749 ms
17-02-28 20:11:44.777 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:11:44.777 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:11:44.777 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:11:44.838 -08 000000055 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:11:44.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:44.839 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:44.840 -08 000000085 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:11:44.840 -08 000000062 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:11:44.840 -08 000000105 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:11:44.840 -08 000000062 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:11:44.840 -08 000000062 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:11:44.840 -08 000000085 INF: ======================================
17-02-28 20:11:44.841 -08 000000105 INF: ======================================
17-02-28 20:11:44.902 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:11:44.902 -08 000000062 INF: ======================================
17-02-28 20:11:44.903 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:44.904 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:44.905 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:11:44.937 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:44.937 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:11:44.964 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:44.964 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:11:45.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:45.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:11:45.061 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:11:45.062 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:11:45.062 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:11:45.063 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:11:45.071 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:11:45.071 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:11:45.071 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:11:45.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:11:45.779 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.081365814089077Best Z position at top surface = -0.154384141549849Best Z position at top surface + compensator offset = -0.131684141549849 C:2,L:8,B
17-02-28 20:11:45.781 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.154384141549849
17-02-28 20:11:45.781 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94967
17-02-28 20:11:45.781 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.081365814089077
17-02-28 20:11:45.781 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.59847
17-02-28 20:11:45.781 -08 000000042 INF: Z-height at LaneBottomSurface is -0.081365814089077.
17-02-28 20:11:45.781 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:11:45.917 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:11:45.917 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:11:45.961 -08 000000066 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:45.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:11:45.963 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:45.963 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:45.964 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:45.964 -08 000000068 INF: ===================Move Tilt Motor 1===================
17-02-28 20:11:45.964 -08 000000109 INF: ===================Move Tilt Motor 2===================
17-02-28 20:11:45.964 -08 000000058 INF: ===================Move Tilt Motor 3===================
17-02-28 20:11:45.965 -08 000000109 INF: Tilt Motor 2: Moving to 5.4532 mm, started at 5.4519 mm, delta = 0.0013 mm
17-02-28 20:11:45.965 -08 000000109 INF: FPGA: Xmit T2RD\n
17-02-28 20:11:45.965 -08 000000058 INF: Tilt Motor 3: Moving to 5.3996 mm, started at 5.3988 mm, delta = 0.0008 mm
17-02-28 20:11:45.965 -08 000000068 INF: ======================================
17-02-28 20:11:45.966 -08 000000058 INF: FPGA: Xmit T3RD\n
17-02-28 20:11:46.023 -08 000000105 INF: FPGA: Recv T2RD 21464
17-02-28 20:11:46.023 -08 000000105 INF: FPGA: Recv T3RD 21254
17-02-28 20:11:46.023 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3577 + 2/6
17-02-28 20:11:46.023 -08 000000109 INF: Tilt Motor 2: Moving to 21469 encoder counts
17-02-28 20:11:46.023 -08 000000109 INF: FPGA: Xmit T2MOVETO 21469\n
17-02-28 20:11:46.023 -08 000000058 INF: Tilt Motor 3: Encoder: at motor step 3542 + 2/6
17-02-28 20:11:46.023 -08 000000058 INF: Tilt Motor 3: Moving to 21258 encoder counts
17-02-28 20:11:46.024 -08 000000058 INF: FPGA: Xmit T3MOVETO 21258\n
17-02-28 20:11:46.148 -08 000000105 INF: FPGA: Recv T3MOVETO 0
17-02-28 20:11:46.148 -08 000000105 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:11:46.148 -08 000000109 INF: Tilt Motor 2: To move from 5.452 to 5.453 (0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:11:46.148 -08 000000109 INF: FPGA: Xmit T2RD\n
17-02-28 20:11:46.148 -08 000000058 INF: Tilt Motor 3: To move from 5.399 to 5.400 (0.001 mm) should take 1 steps, but required 0 steps (0.000 mm). Slippage = -0.002 mm (-1.85%)
17-02-28 20:11:46.149 -08 000000058 INF: FPGA: Xmit T3RD\n
17-02-28 20:11:46.213 -08 000000074 INF: FPGA: Recv T2RD 21469
17-02-28 20:11:46.213 -08 000000074 INF: FPGA: Recv T3RD 21254
17-02-28 20:11:46.213 -08 000000058 INF: Tilt Motor 3: Encoder: at motor step 3542 + 2/6
17-02-28 20:11:46.213 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3578 + 1/6
17-02-28 20:11:46.213 -08 000000058 INF: FPGA: Xmit T3RD\n
17-02-28 20:11:46.214 -08 000000109 INF: FPGA: Xmit T2RD\n
17-02-28 20:11:46.275 -08 000000105 INF: FPGA: Recv T3RD 21254
17-02-28 20:11:46.275 -08 000000105 INF: FPGA: Recv T2RD 21469
17-02-28 20:11:46.275 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3578 + 1/6
17-02-28 20:11:46.275 -08 000000109 INF: FPGA: Xmit T2RD\n
17-02-28 20:11:46.275 -08 000000058 INF: Tilt Motor 3: Encoder: at motor step 3542 + 2/6
17-02-28 20:11:46.276 -08 000000058 INF: FPGA: Xmit T3RD\n
17-02-28 20:11:46.337 -08 000000034 INF: FPGA: Recv T2RD 21469
17-02-28 20:11:46.337 -08 000000034 INF: FPGA: Recv T3RD 21254
17-02-28 20:11:46.337 -08 000000058 INF: Tilt Motor 3: Encoder: at motor step 3542 + 2/6
17-02-28 20:11:46.337 -08 000000058 INF: Tilt Motor 3: After move to 5.3996, error = -0.0011, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:11:46.337 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3578 + 1/6
17-02-28 20:11:46.337 -08 000000058 INF: Tilt Motor 3: Moved to 5.3985 after 371.3478 ms
17-02-28 20:11:46.337 -08 000000109 INF: Tilt Motor 2: After move to 5.4532, error = -0.0001, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:11:46.337 -08 000000109 INF: Tilt Motor 2: Moved to 5.4531 after 371.5307 ms
17-02-28 20:11:46.337 -08 000000058 INF: ======================================
17-02-28 20:11:46.337 -08 000000109 INF: ======================================
17-02-28 20:11:46.338 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:46.339 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:46.340 -08 000000042 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=4.97847296731801, m2=5.45318979375872, m3=5.39959579375872
17-02-28 20:11:46.340 -08 000000042 INF: ETF Best Z: -0.08136582 mm (21329 DAC)
17-02-28 20:11:46.340 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:46.341 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:46.341 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:11:46.341 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:46.342 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:46.776 -08 000000042 INF: Swath 1 position calculated to be: {X=87.98318, Y=39.78827} from estimated center X= 88.50199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:11:46.776 -08 000000042 INF: Swath 2 position calculated to be: {X=89.09118, Y=39.78827} from estimated center X= 88.50199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:11:46.782 -08 000000042 INF: Swath 0: Converted transform from (-11.71005, -12.60138) pixels to (-0.00414, -0.004485) mm.
17-02-28 20:11:46.788 -08 000000042 INF: Swath 1: Converted transform from (-30.06179, -6.061213) pixels to (-0.01035, -0.00207) mm.
17-02-28 20:11:46.789 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827===================
17-02-28 20:11:46.790 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827===================
17-02-28 20:11:46.790 -08 000000042 INF: Transformed XStagePosition from 87.98318 mm to 87.9790371851996 mm.
17-02-28 20:11:46.802 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5737928015888 mm.
17-02-28 20:11:46.802 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3737928015888 mm.
17-02-28 20:11:46.802 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4645428015888 mm.
17-02-28 20:11:46.804 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:46.804 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:11:46.804 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:46.804 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = H_1
17-02-28 20:11:46.813 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:46.813 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:46.814 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:11:46.814 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:11:46.814 -08 000000039 INF: ===================MoveEmissionFilters===================
17-02-28 20:11:46.815 -08 000000044 INF: ===================Move X,Y, Parallel===================
17-02-28 20:11:46.815 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:11:46.815 -08 000000068 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:11:46.815 -08 000000068 INF: Z Motor: Moving to -0.1014 mm, started at -0.0100 mm
17-02-28 20:11:46.815 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:11:46.815 -08 000000068 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:11:46.815 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:11:46.815 -08 000000058 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:11:46.815 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:11:46.816 -08 000000102 INF: ===================Move X Motor without settling===================
17-02-28 20:11:46.816 -08 000000102 INF: X Motor: Xmit PR VM\n
17-02-28 20:11:46.816 -08 000000064 INF: ===================Move Y Motor without settling===================
17-02-28 20:11:46.816 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:11:46.816 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:11:46.816 -08 000000064 INF: Y Motor: Moving to 64.5738 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:11:46.816 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:11:46.817 -08 000000064 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:11:46.817 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:46.817 -08 000000032 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:11:46.817 -08 000000076 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:11:46.817 -08 000000058 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:11:46.817 -08 000000066 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:11:46.817 -08 000000030 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:11:46.818 -08 000000032 INF: ======================================
17-02-28 20:11:46.818 -08 000000052 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:11:46.818 -08 000000076 INF: ======================================
17-02-28 20:11:46.818 -08 000000101 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:11:46.818 -08 000000066 INF: ======================================
17-02-28 20:11:46.818 -08 000000101 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:11:46.818 -08 000000052 INF: ======================================
17-02-28 20:11:46.818 -08 000000101 INF: ======================================
17-02-28 20:11:46.819 -08 000000030 INF: ======================================
17-02-28 20:11:46.819 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:11:46.820 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:11:46.820 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:11:46.820 -08 000000085 INF: ======================================
17-02-28 20:11:46.821 -08 000000030 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:11:46.821 -08 000000110 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:11:46.821 -08 000000081 INF: ======================================
17-02-28 20:11:46.821 -08 000000110 INF: ======================================
17-02-28 20:11:46.821 -08 000000109 INF: ======================================
17-02-28 20:11:46.821 -08 000000030 INF: ======================================
17-02-28 20:11:46.823 -08 000000058 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:11:46.824 -08 000000058 INF: ======================================
17-02-28 20:11:46.825 -08 000000039 INF: ======================================
17-02-28 20:11:46.836 -08 000000091 INF: FPGA: Recv ZTRG 
17-02-28 20:11:46.836 -08 000000068 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:11:46.898 -08 000000081 INF: FPGA: Recv ZYT 
17-02-28 20:11:46.898 -08 000000068 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:11:46.898 -08 000000068 INF: FPGA: Xmit ZMV 26572\n
17-02-28 20:11:46.900 -08 000000102 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:11:46.900 -08 000000102 INF: X Motor: Xmit PR VI\n
17-02-28 20:11:46.900 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:11:46.900 -08 000000064 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:11:46.900 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:46.960 -08 000000034 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:11:46.960 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:11:46.962 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:11:46.962 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:46.962 -08 000000102 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:11:46.962 -08 000000102 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:11:46.962 -08 000000102 INF: X Motor: Moving to 87.9790 mm @15.000 mm/sec, started at 88.5410 mm
17-02-28 20:11:46.962 -08 000000102 INF: X Motor: Xmit MA 11870\n
17-02-28 20:11:47.022 -08 000000081 INF: FPGA: Recv ZMV 
17-02-28 20:11:47.022 -08 000000068 INF: Z Motor: MoveAndTrigger 'ZMV' command took 124.1405 ms
17-02-28 20:11:47.022 -08 000000068 INF: FPGA: Xmit ZDACR\n
17-02-28 20:11:47.024 -08 000000102 INF: X Motor: Recv MA 11870\r\n>
17-02-28 20:11:47.024 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:11:47.024 -08 000000064 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:47.024 -08 000000102 INF: X Motor: WaitUntilStopped 60037
17-02-28 20:11:47.024 -08 000000064 INF: Y Motor: Set target position to 5957379 encoder counts
17-02-28 20:11:47.024 -08 000000064 INF: Y Motor: Xmit s r0xca 5957379\r
17-02-28 20:11:47.086 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:11:47.086 -08 000000064 INF: Y Motor: Start the move command
17-02-28 20:11:47.086 -08 000000064 INF: Y Motor: Xmit t 1\r
17-02-28 20:11:47.086 -08 000000034 INF: FPGA: Recv ZDACR 26572
17-02-28 20:11:47.087 -08 000000068 INF: Z Motor: MoveAndTrigger took 271.4428 ms w/comms
17-02-28 20:11:47.087 -08 000000068 INF: Z Motor: After move to -0.1014, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:11:47.087 -08 000000068 INF: Z Motor: MoveAbsStepped took 271.5774 ms
17-02-28 20:11:47.087 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:11:47.088 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:11:47.089 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:11:47.089 -08 000000066 INF: ===================Camera Arm TDI===================
17-02-28 20:11:47.090 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:47.090 -08 000000066 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:11:47.091 -08 000000058 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:11:47.091 -08 000000066 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:11:47.091 -08 000000058 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:11:47.091 -08 000000058 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:11:47.149 -08 000000104 INF: FPGA: Recv ZSEL 
17-02-28 20:11:47.150 -08 000000058 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:11:47.150 -08 000000058 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:11:47.152 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:11:47.152 -08 000000064 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:11:47.152 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:47.212 -08 000000062 INF: FPGA: Recv TDIBB
17-02-28 20:11:47.212 -08 000000058 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:11:47.213 -08 000000058 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:11:47.213 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:47.215 -08 000000058 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:11:47.215 -08 000000058 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:11:47.215 -08 000000058 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:11:47.273 -08 000000053 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:47.273 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:47.275 -08 000000064 INF: Y Motor: Unshifted Position: 5882717
17-02-28 20:11:47.275 -08 000000058 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:11:47.275 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:47.277 -08 000000058 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:11:47.277 -08 000000058 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:11:47.277 -08 000000058 INF: Z Motor: Arming to move to -0.0614 mm
17-02-28 20:11:47.277 -08 000000058 INF: FPGA: Xmit ZYT 6437379 4\n
17-02-28 20:11:47.325 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:47.336 -08 000000039 INF: FPGA: Recv ZYT 
17-02-28 20:11:47.336 -08 000000058 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6382717 enc / 63.827 mm / ) = 6437379 enc / 64.374 mm
17-02-28 20:11:47.336 -08 000000058 INF: FPGA: Xmit ZARM 16086\n
17-02-28 20:11:47.397 -08 000000010 INF: FPGA: Recv ZARM
17-02-28 20:11:47.397 -08 000000058 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.8813 ms
17-02-28 20:11:47.397 -08 000000058 INF: Z Motor: ArmAbsStepped took 119.7927 ms
17-02-28 20:11:47.397 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:47.398 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:11:47.400 -08 000000058 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:11:47.400 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:11:47.402 -08 000000058 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:11:47.402 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:11:47.403 -08 000000058 INF: ======================================
17-02-28 20:11:47.449 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:47.461 -08 000000102 INF: X Motor: Xmit PR ER\n
17-02-28 20:11:47.523 -08 000000102 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:11:47.523 -08 000000102 INF: X Motor: Moved to 87.9795 after 499 ms
17-02-28 20:11:47.523 -08 000000102 INF: ======================================
17-02-28 20:11:47.589 -08 000000064 INF: Y Motor: Unshifted Position: 5957380
17-02-28 20:11:47.589 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:11:47.589 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:47.648 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:11:47.648 -08 000000064 INF: Y Motor: Moved to 64.5738 after 496 ms
17-02-28 20:11:47.648 -08 000000064 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:11:47.710 -08 000000064 INF: Y Motor: Recv v 4096\r
17-02-28 20:11:47.710 -08 000000064 INF: Y Motor: Status After move finished OK:
17-02-28 20:11:47.710 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:47.775 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:11:47.775 -08 000000064 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:47.775 -08 000000064 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:11:47.837 -08 000000064 INF: Y Motor: Recv v 402653184\r
17-02-28 20:11:47.837 -08 000000064 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:11:47.837 -08 000000064 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:11:47.837 -08 000000064 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:11:47.899 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:11:47.899 -08 000000064 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:11:47.899 -08 000000064 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:11:47.899 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:47.961 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:11:47.961 -08 000000064 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:11:47.961 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:48.024 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:11:48.024 -08 000000064 INF: ======================================
17-02-28 20:11:48.025 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:11:48.026 -08 000000044 INF: ======================================
17-02-28 20:11:48.031 -08 000000066 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:11:48.031 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:11:48.031 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:11:48.046 -08 000000066 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:11:48.048 -08 000000066 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:11:49.027 -08 000000066 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:11:49.027 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:11:49.027 -08 000000066 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:11:49.042 -08 000000066 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:11:49.044 -08 000000066 INF: ===================Camera Arm TDI===================
17-02-28 20:11:49.045 -08 000000066 INF: ======================================
17-02-28 20:11:49.046 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:11:49.047 -08 000000068 INF: ======================================
17-02-28 20:11:49.048 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:49.049 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:49.049 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:11:49.049 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:11:49.147 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:11:49.147 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:11:49.207 -08 000000069 INF: FPGA: Recv ZFREQCL
17-02-28 20:11:49.207 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:11:49.207 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:49.207 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:11:49.269 -08 000000106 INF: FPGA: Recv TDIYERD 6457380
17-02-28 20:11:49.269 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457380 counts (64.574 mm)
17-02-28 20:11:49.269 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:49.270 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:49.270 -08 000000030 INF: ===================TDI FPGA Arm===================
17-02-28 20:11:49.270 -08 000000052 INF: ===================Set YMotor gains for scans===================
17-02-28 20:11:49.271 -08 000000052 INF: ======================================
17-02-28 20:11:49.271 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:11:49.272 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:11:49.272 -08 000000030 INF: FPGA: Xmit TDIYPOS 6346454\n
17-02-28 20:11:49.331 -08 000000091 INF: FPGA: Recv TDIYPOS
17-02-28 20:11:49.331 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:11:49.333 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:11:49.333 -08 000000030 INF: FPGA: Xmit TDIYARM3 139264 6437379 1 1\n
17-02-28 20:11:49.393 -08 000000053 INF: FPGA: Recv TDIYARM3
17-02-28 20:11:49.393 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:11:49.394 -08 000000030 INF: ===================TDI FPGA Arm===================
17-02-28 20:11:49.395 -08 000000030 INF: ======================================
17-02-28 20:11:49.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:11:49.397 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:49.397 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:49.398 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:49.398 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:49.399 -08 000000069 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:11:49.399 -08 000000058 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:11:49.399 -08 000000069 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:11:49.399 -08 000000069 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:11:49.399 -08 000000069 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:11:49.399 -08 000000058 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:11:49.399 -08 000000069 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:11:49.399 -08 000000058 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:11:49.399 -08 000000058 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:11:49.400 -08 000000058 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:11:49.768 -08 000000052 INF: FPGA: Recv EX2MV
17-02-28 20:11:49.768 -08 000000052 INF: FPGA: Recv EX1MV
17-02-28 20:11:49.768 -08 000000058 INF: Excitation Filter 1: Moved -107 steps in 368.5939 ms
17-02-28 20:11:49.768 -08 000000058 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.7319 ms
17-02-28 20:11:49.768 -08 000000058 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.8026 ms
17-02-28 20:11:49.768 -08 000000069 INF: Excitation Filter 2: Moved -107 steps in 368.8083 ms
17-02-28 20:11:49.768 -08 000000069 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.0071 ms
17-02-28 20:11:49.768 -08 000000069 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.0827 ms
17-02-28 20:11:49.768 -08 000000058 INF: ======================================
17-02-28 20:11:49.768 -08 000000069 INF: ======================================
17-02-28 20:11:49.769 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:49.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:49.771 -08 000000104 INF: ===================Camera TDI===================
17-02-28 20:11:49.771 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:49.771 -08 000000076 INF: ===================FPGA Z Wait===================
17-02-28 20:11:49.771 -08 000000045 INF: ===================Move Y Motor without settling===================
17-02-28 20:11:49.772 -08 000000076 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:11:49.772 -08 000000045 INF: Y Motor: Moving to 14.9255 mm @6.500 mm/sec, started at 64.5738 mm
17-02-28 20:11:49.772 -08 000000104 INF: ===================Camera TDI, Parallel===================
17-02-28 20:11:49.772 -08 000000032 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:11:49.772 -08 000000045 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:11:49.772 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:49.773 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:11:49.773 -08 000000032 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:11:49.773 -08 000000109 INF: ===================Camera TDI===================
17-02-28 20:11:49.774 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:49.774 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:49.776 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:49.776 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:49.832 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:11:49.832 -08 000000045 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:11:49.832 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:49.894 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:11:49.894 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:49.925 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:49.925 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:49.926 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:49.926 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:49.959 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:11:49.959 -08 000000045 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:49.959 -08 000000045 INF: Y Motor: Set target position to 992546 encoder counts
17-02-28 20:11:49.959 -08 000000045 INF: Y Motor: Xmit s r0xca 992546\r
17-02-28 20:11:50.020 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:11:50.020 -08 000000045 INF: Y Motor: Start the move command
17-02-28 20:11:50.020 -08 000000045 INF: Y Motor: Xmit t 1\r
17-02-28 20:11:50.075 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:50.075 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:50.076 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:11:50.076 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:11:50.084 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:11:50.084 -08 000000045 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:11:50.084 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:50.142 -08 000000110 INF: FPGA: Recv ZWAIT 
17-02-28 20:11:50.142 -08 000000076 INF: ======================================
17-02-28 20:11:50.206 -08 000000045 INF: Y Motor: Unshifted Position: 5893572
17-02-28 20:11:50.225 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:11:50.225 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:11:50.225 -08 000000109 INF: ===================Camera #2 Frame #5===================
17-02-28 20:11:50.226 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:11:50.226 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:11:50.226 -08 000000068 INF: ===================Camera #0 Frame #5===================
17-02-28 20:11:50.256 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:50.383 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:50.392 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:11:50.392 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:11:50.392 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:11:50.392 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:11:50.392 -08 000000068 INF: ===================Camera #0 Frame #11===================
17-02-28 20:11:50.392 -08 000000109 INF: ===================Camera #2 Frame #11===================
17-02-28 20:11:50.519 -08 000000045 INF: Y Motor: Unshifted Position: 5691856
17-02-28 20:11:50.561 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:11:50.561 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:11:50.561 -08 000000068 INF: ===================Camera #0 Frame #17===================
17-02-28 20:11:50.562 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:11:50.562 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:11:50.562 -08 000000109 INF: ===================Camera #2 Frame #17===================
17-02-28 20:11:50.569 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:50.693 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:50.731 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:11:50.731 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:11:50.731 -08 000000068 INF: ===================Camera #0 Frame #23===================
17-02-28 20:11:50.732 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:11:50.732 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:11:50.732 -08 000000109 INF: ===================Camera #2 Frame #23===================
17-02-28 20:11:50.833 -08 000000045 INF: Y Motor: Unshifted Position: 5488205
17-02-28 20:11:50.883 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:50.901 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:11:50.901 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:11:50.901 -08 000000068 INF: ===================Camera #0 Frame #29===================
17-02-28 20:11:50.903 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:11:50.903 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:11:50.903 -08 000000109 INF: ===================Camera #2 Frame #29===================
17-02-28 20:11:51.006 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:51.071 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:11:51.071 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:11:51.071 -08 000000068 INF: ===================Camera #0 Frame #36===================
17-02-28 20:11:51.074 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:11:51.074 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:11:51.074 -08 000000109 INF: ===================Camera #2 Frame #36===================
17-02-28 20:11:51.142 -08 000000045 INF: Y Motor: Unshifted Position: 5286696
17-02-28 20:11:51.192 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:51.244 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:11:51.244 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:11:51.244 -08 000000068 INF: ===================Camera #0 Frame #42===================
17-02-28 20:11:51.248 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:11:51.248 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:11:51.248 -08 000000109 INF: ===================Camera #2 Frame #42===================
17-02-28 20:11:51.320 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:51.414 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:11:51.414 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:11:51.414 -08 000000068 INF: ===================Camera #0 Frame #48===================
17-02-28 20:11:51.418 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:11:51.418 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:11:51.418 -08 000000109 INF: ===================Camera #2 Frame #48===================
17-02-28 20:11:51.455 -08 000000045 INF: Y Motor: Unshifted Position: 5083241
17-02-28 20:11:51.505 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:51.584 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:11:51.584 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:11:51.584 -08 000000068 INF: ===================Camera #0 Frame #55===================
17-02-28 20:11:51.588 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:11:51.588 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:11:51.588 -08 000000109 INF: ===================Camera #2 Frame #55===================
17-02-28 20:11:51.629 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:51.757 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:11:51.757 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:11:51.757 -08 000000068 INF: ===================Camera #0 Frame #61===================
17-02-28 20:11:51.762 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:11:51.762 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:11:51.762 -08 000000109 INF: ===================Camera #2 Frame #61===================
17-02-28 20:11:51.768 -08 000000045 INF: Y Motor: Unshifted Position: 4879576
17-02-28 20:11:51.818 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:51.926 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:11:51.926 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:11:51.926 -08 000000068 INF: ===================Camera #0 Frame #67===================
17-02-28 20:11:51.932 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:11:51.932 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:11:51.932 -08 000000109 INF: ===================Camera #2 Frame #67===================
17-02-28 20:11:51.942 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:52.078 -08 000000045 INF: Y Motor: Unshifted Position: 4678077
17-02-28 20:11:52.096 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:11:52.096 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:11:52.096 -08 000000068 INF: ===================Camera #0 Frame #73===================
17-02-28 20:11:52.102 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:11:52.102 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:11:52.102 -08 000000109 INF: ===================Camera #2 Frame #74===================
17-02-28 20:11:52.128 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:52.255 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:52.265 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:11:52.265 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:11:52.265 -08 000000068 INF: ===================Camera #0 Frame #80===================
17-02-28 20:11:52.275 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:11:52.275 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:11:52.275 -08 000000109 INF: ===================Camera #2 Frame #80===================
17-02-28 20:11:52.391 -08 000000045 INF: Y Motor: Unshifted Position: 4474400
17-02-28 20:11:52.438 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:11:52.438 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:11:52.438 -08 000000068 INF: ===================Camera #0 Frame #86===================
17-02-28 20:11:52.441 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:52.446 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:11:52.446 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:11:52.446 -08 000000109 INF: ===================Camera #2 Frame #86===================
17-02-28 20:11:52.565 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:52.608 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:11:52.608 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:11:52.608 -08 000000068 INF: ===================Camera #0 Frame #92===================
17-02-28 20:11:52.616 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:11:52.616 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:11:52.616 -08 000000109 INF: ===================Camera #2 Frame #93===================
17-02-28 20:11:52.704 -08 000000045 INF: Y Motor: Unshifted Position: 4270731
17-02-28 20:11:52.754 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:52.778 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:11:52.778 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:11:52.778 -08 000000068 INF: ===================Camera #0 Frame #99===================
17-02-28 20:11:52.790 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:11:52.790 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:11:52.790 -08 000000109 INF: ===================Camera #2 Frame #99===================
17-02-28 20:11:52.878 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:52.951 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:11:52.951 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:11:52.951 -08 000000068 INF: ===================Camera #0 Frame #105===================
17-02-28 20:11:52.961 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:11:52.961 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:11:52.961 -08 000000109 INF: ===================Camera #2 Frame #105===================
17-02-28 20:11:53.014 -08 000000045 INF: Y Motor: Unshifted Position: 4069228
17-02-28 20:11:53.064 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:53.121 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:11:53.121 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:11:53.121 -08 000000068 INF: ===================Camera #0 Frame #111===================
17-02-28 20:11:53.132 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:11:53.132 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:11:53.132 -08 000000109 INF: ===================Camera #2 Frame #112===================
17-02-28 20:11:53.191 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:53.290 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:11:53.290 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:11:53.290 -08 000000068 INF: ===================Camera #0 Frame #117===================
17-02-28 20:11:53.306 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:11:53.306 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:11:53.306 -08 000000109 INF: ===================Camera #2 Frame #118===================
17-02-28 20:11:53.327 -08 000000045 INF: Y Motor: Unshifted Position: 3865779
17-02-28 20:11:53.377 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:53.459 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:11:53.459 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:11:53.459 -08 000000068 INF: ===================Camera #0 Frame #124===================
17-02-28 20:11:53.476 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:11:53.476 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:11:53.476 -08 000000109 INF: ===================Camera #2 Frame #124===================
17-02-28 20:11:53.501 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:53.630 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:11:53.630 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:11:53.630 -08 000000068 INF: ===================Camera #0 Frame #130===================
17-02-28 20:11:53.640 -08 000000045 INF: Y Motor: Unshifted Position: 3662109
17-02-28 20:11:53.646 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:11:53.646 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:11:53.646 -08 000000109 INF: ===================Camera #2 Frame #130===================
17-02-28 20:11:53.690 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:53.799 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:11:53.799 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:11:53.799 -08 000000068 INF: ===================Camera #0 Frame #136===================
17-02-28 20:11:53.815 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:53.817 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:11:53.817 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:11:53.817 -08 000000109 INF: ===================Camera #2 Frame #137===================
17-02-28 20:11:53.950 -08 000000045 INF: Y Motor: Unshifted Position: 3460401
17-02-28 20:11:53.969 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:11:53.969 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:11:53.969 -08 000000068 INF: ===================Camera #0 Frame #142===================
17-02-28 20:11:53.991 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:11:53.991 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:11:53.991 -08 000000109 INF: ===================Camera #2 Frame #143===================
17-02-28 20:11:54.000 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:54.125 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:54.138 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:11:54.138 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:11:54.138 -08 000000068 INF: ===================Camera #0 Frame #149===================
17-02-28 20:11:54.162 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:11:54.162 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:11:54.162 -08 000000109 INF: ===================Camera #2 Frame #149===================
17-02-28 20:11:54.264 -08 000000045 INF: Y Motor: Unshifted Position: 3256299
17-02-28 20:11:54.311 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:11:54.311 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:11:54.311 -08 000000068 INF: ===================Camera #0 Frame #155===================
17-02-28 20:11:54.314 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:54.333 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:11:54.333 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:11:54.333 -08 000000109 INF: ===================Camera #2 Frame #156===================
17-02-28 20:11:54.438 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:54.481 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:11:54.481 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:11:54.481 -08 000000068 INF: ===================Camera #0 Frame #161===================
17-02-28 20:11:54.507 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:11:54.507 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:11:54.507 -08 000000109 INF: ===================Camera #2 Frame #162===================
17-02-28 20:11:54.574 -08 000000045 INF: Y Motor: Unshifted Position: 3054584
17-02-28 20:11:54.624 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:54.650 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:11:54.650 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:11:54.650 -08 000000068 INF: ===================Camera #0 Frame #167===================
17-02-28 20:11:54.678 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:11:54.678 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:11:54.678 -08 000000109 INF: ===================Camera #2 Frame #168===================
17-02-28 20:11:54.751 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:54.820 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:11:54.820 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:11:54.820 -08 000000068 INF: ===================Camera #0 Frame #174===================
17-02-28 20:11:54.848 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:11:54.848 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:11:54.848 -08 000000109 INF: ===================Camera #2 Frame #175===================
17-02-28 20:11:54.887 -08 000000045 INF: Y Motor: Unshifted Position: 2851142
17-02-28 20:11:54.937 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:54.991 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:11:54.991 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:11:54.991 -08 000000068 INF: ===================Camera #0 Frame #180===================
17-02-28 20:11:55.022 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:11:55.022 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:11:55.022 -08 000000109 INF: ===================Camera #2 Frame #181===================
17-02-28 20:11:55.061 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:55.159 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:11:55.159 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:11:55.159 -08 000000068 INF: ===================Camera #0 Frame #186===================
17-02-28 20:11:55.191 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:11:55.191 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:11:55.191 -08 000000109 INF: ===================Camera #2 Frame #187===================
17-02-28 20:11:55.200 -08 000000045 INF: Y Motor: Unshifted Position: 2647468
17-02-28 20:11:55.250 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:55.327 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:11:55.327 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:11:55.327 -08 000000068 INF: ===================Camera #0 Frame #192===================
17-02-28 20:11:55.361 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:11:55.361 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:11:55.361 -08 000000109 INF: ===================Camera #2 Frame #194===================
17-02-28 20:11:55.374 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:55.495 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:11:55.495 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:11:55.495 -08 000000068 INF: ===================Camera #0 Frame #199===================
17-02-28 20:11:55.510 -08 000000045 INF: Y Motor: Unshifted Position: 2445978
17-02-28 20:11:55.535 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:11:55.535 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:11:55.535 -08 000000109 INF: ===================Camera #2 Frame #200===================
17-02-28 20:11:55.560 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:55.668 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:11:55.668 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:11:55.668 -08 000000068 INF: ===================Camera #0 Frame #205===================
17-02-28 20:11:55.687 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:55.706 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:11:55.706 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:11:55.706 -08 000000109 INF: ===================Camera #2 Frame #206===================
17-02-28 20:11:55.823 -08 000000045 INF: Y Motor: Unshifted Position: 2242318
17-02-28 20:11:55.836 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:11:55.836 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:11:55.836 -08 000000068 INF: ===================Camera #0 Frame #211===================
17-02-28 20:11:55.873 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:55.877 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:11:55.877 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:11:55.877 -08 000000109 INF: ===================Camera #2 Frame #213===================
17-02-28 20:11:55.997 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:56.006 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:11:56.006 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:11:56.006 -08 000000068 INF: ===================Camera #0 Frame #217===================
17-02-28 20:11:56.051 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:11:56.051 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:11:56.051 -08 000000109 INF: ===================Camera #2 Frame #219===================
17-02-28 20:11:56.136 -08 000000045 INF: Y Motor: Unshifted Position: 2040813
17-02-28 20:11:56.176 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:11:56.176 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:11:56.176 -08 000000068 INF: ===================Camera #0 Frame #224===================
17-02-28 20:11:56.186 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:56.223 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:11:56.223 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:11:56.223 -08 000000109 INF: ===================Camera #2 Frame #225===================
17-02-28 20:11:56.307 -08 000000062 INF: RunCopyService queue size at 2/28/2017 8:11:56 PM is 2
17-02-28 20:11:56.311 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:56.350 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:11:56.350 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:11:56.350 -08 000000068 INF: ===================Camera #0 Frame #230===================
17-02-28 20:11:56.394 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:11:56.394 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:11:56.394 -08 000000109 INF: ===================Camera #2 Frame #232===================
17-02-28 20:11:56.450 -08 000000045 INF: Y Motor: Unshifted Position: 1837363
17-02-28 20:11:56.500 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:56.520 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:11:56.520 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:11:56.520 -08 000000068 INF: ===================Camera #0 Frame #236===================
17-02-28 20:11:56.568 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:11:56.568 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:11:56.568 -08 000000109 INF: ===================Camera #2 Frame #238===================
17-02-28 20:11:56.623 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:56.690 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:11:56.690 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:11:56.690 -08 000000068 INF: ===================Camera #0 Frame #243===================
17-02-28 20:11:56.738 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:11:56.738 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:11:56.738 -08 000000109 INF: ===================Camera #2 Frame #244===================
17-02-28 20:11:56.759 -08 000000045 INF: Y Motor: Unshifted Position: 1634341
17-02-28 20:11:56.809 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:56.863 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:11:56.863 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:11:56.863 -08 000000068 INF: ===================Camera #0 Frame #249===================
17-02-28 20:11:56.908 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:11:56.908 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:11:56.908 -08 000000109 INF: ===================Camera #2 Frame #251===================
17-02-28 20:11:56.936 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:57.033 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:11:57.033 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:11:57.033 -08 000000068 INF: ===================Camera #0 Frame #255===================
17-02-28 20:11:57.074 -08 000000045 INF: Y Motor: Unshifted Position: 1430669
17-02-28 20:11:57.082 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:11:57.082 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:11:57.082 -08 000000109 INF: ===================Camera #2 Frame #257===================
17-02-28 20:11:57.124 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:57.203 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:11:57.203 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:11:57.203 -08 000000068 INF: ===================Camera #0 Frame #261===================
17-02-28 20:11:57.246 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:57.253 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:11:57.253 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:11:57.253 -08 000000109 INF: ===================Camera #2 Frame #263===================
17-02-28 20:11:57.373 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:11:57.373 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:11:57.373 -08 000000068 INF: ===================Camera #0 Frame #268===================
17-02-28 20:11:57.385 -08 000000045 INF: Y Motor: Unshifted Position: 1229159
17-02-28 20:11:57.423 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:11:57.423 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:11:57.423 -08 000000109 INF: ===================Camera #2 Frame #270===================
17-02-28 20:11:57.435 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:57.507 -08 000000074 INF: FPGA: Recv TDIYWAIT
17-02-28 20:11:57.507 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:57.509 -08 000000032 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:11:57.510 -08 000000055 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:11:57.510 -08 000000098 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:11:57.510 -08 000000055 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:11:57.510 -08 000000055 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:11:57.510 -08 000000055 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:11:57.510 -08 000000098 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:11:57.510 -08 000000098 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:11:57.510 -08 000000098 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:11:57.510 -08 000000055 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:11:57.511 -08 000000098 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:11:57.546 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:11:57.546 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:11:57.546 -08 000000068 INF: ===================Camera #0 Frame #272===================
17-02-28 20:11:57.559 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:57.559 -08 000000068 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:11:57.560 -08 000000068 INF: ===================CameraTDI Cleanup===================
17-02-28 20:11:57.695 -08 000000045 INF: Y Motor: Unshifted Position: 1025498
17-02-28 20:11:57.727 -08 000000068 INF: Camera #0 ReleaseBuffer
17-02-28 20:11:57.727 -08 000000109 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:11:57.727 -08 000000109 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:11:57.727 -08 000000109 INF: ===================Camera #2 Frame #272===================
17-02-28 20:11:57.727 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:11:57.734 -08 000000109 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:11:57.735 -08 000000109 INF: ===================CameraTDI Cleanup===================
17-02-28 20:11:57.745 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:57.758 -08 000000068 INF: ======================================
17-02-28 20:11:57.882 -08 000000100 INF: FPGA: Recv EX1MV
17-02-28 20:11:57.882 -08 000000100 INF: FPGA: Recv EX2MV
17-02-28 20:11:57.882 -08 000000098 INF: Excitation Filter 2: Moved 107 steps in 371.9546 ms
17-02-28 20:11:57.882 -08 000000098 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.0499 ms
17-02-28 20:11:57.882 -08 000000098 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.118 ms
17-02-28 20:11:57.882 -08 000000055 INF: Excitation Filter 1: Moved 107 steps in 372.1275 ms
17-02-28 20:11:57.882 -08 000000055 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.3218 ms
17-02-28 20:11:57.882 -08 000000055 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.3894 ms
17-02-28 20:11:57.882 -08 000000098 INF: ======================================
17-02-28 20:11:57.882 -08 000000055 INF: ======================================
17-02-28 20:11:57.884 -08 000000045 INF: Y Motor: Unshifted Position: 992545
17-02-28 20:11:57.884 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:11:57.884 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:11:57.884 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:57.885 -08 000000032 INF: ======================================
17-02-28 20:11:57.934 -08 000000109 INF: Camera #2 ReleaseBuffer
17-02-28 20:11:57.934 -08 000000109 INF: ===================Camera TDI===================
17-02-28 20:11:57.946 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:11:57.946 -08 000000045 INF: Y Motor: Moved to 14.9255 after 7861 ms
17-02-28 20:11:57.946 -08 000000045 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:11:57.969 -08 000000109 INF: ======================================
17-02-28 20:11:57.971 -08 000000104 INF: ===================Camera TDI===================
17-02-28 20:11:57.972 -08 000000104 INF: ======================================
17-02-28 20:11:58.008 -08 000000045 INF: Y Motor: Recv v 4097\r
17-02-28 20:11:58.008 -08 000000045 INF: Y Motor: Status After move finished OK:
17-02-28 20:11:58.008 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:58.070 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:11:58.070 -08 000000045 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:58.070 -08 000000045 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:11:58.133 -08 000000045 INF: Y Motor: Recv v 134217728\r
17-02-28 20:11:58.133 -08 000000045 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:11:58.133 -08 000000045 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:11:58.133 -08 000000045 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:11:58.195 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:11:58.195 -08 000000045 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:11:58.195 -08 000000045 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:11:58.195 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:58.257 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:11:58.257 -08 000000045 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:11:58.257 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:58.319 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:11:58.319 -08 000000045 INF: ======================================
17-02-28 20:11:58.320 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:58.321 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:11:58.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:58.322 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:11:58.379 -08 000000010 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:11:58.379 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:11:58.444 -08 000000034 INF: FPGA: Recv TDIYERD 1492547
17-02-28 20:11:58.444 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:11:58.506 -08 000000085 INF: FPGA: Recv ZADCR 22031
17-02-28 20:11:58.506 -08 000000042 INF: At scan end Y pos = 14.925 and Z pos = -0.085. Y moved -48.539 mm
17-02-28 20:11:58.506 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:11:58.570 -08 000000032 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:11:58.571 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:11:58.571 -08 000000042 INF: TDIScan finished after 11780.3761 ms
17-02-28 20:11:58.571 -08 000000042 INF: Image[0]: Y should trigger at 63.465 mm, 2nd row was at 64.373 mm (error = 0.909 mm)
17-02-28 20:11:58.571 -08 000000042 INF: Image[2]: Y should trigger at 63.465 mm, 2nd row was at 64.373 mm (error = 0.909 mm)
17-02-28 20:11:58.573 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:58.608 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.521 um
17-02-28 20:11:58.608 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:58.609 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:11:58.630 -08 000000090 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:11:58.630 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:58.631 -08 000000102 INF: ===================Dither Clean Up Command===================
17-02-28 20:11:58.631 -08 000000106 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:11:58.631 -08 000000053 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:11:58.631 -08 000000104 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:11:58.632 -08 000000104 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:11:58.632 -08 000000106 INF: ======================================
17-02-28 20:11:58.632 -08 000000104 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:11:58.632 -08 000000053 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:11:58.632 -08 000000053 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:11:58.632 -08 000000062 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:11:58.632 -08 000000066 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:11:58.632 -08 000000066 INF: ======================================
17-02-28 20:11:58.633 -08 000000062 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:11:58.693 -08 000000087 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:58.693 -08 000000087 INF: FPGA: Recv ZSEL 
17-02-28 20:11:58.693 -08 000000062 INF: FPGA: Xmit ZDACW 26572\n
17-02-28 20:11:58.693 -08 000000104 INF: ======================================
17-02-28 20:11:58.695 -08 000000053 INF: Y Motor: Recv ok\r
17-02-28 20:11:58.695 -08 000000053 INF: ======================================
17-02-28 20:11:58.754 -08 000000069 INF: FPGA: Recv ZDACW 
17-02-28 20:11:58.754 -08 000000062 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:11:58.754 -08 000000062 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:11:58.816 -08 000000076 INF: FPGA: Recv TDIBB
17-02-28 20:11:58.816 -08 000000062 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:11:58.817 -08 000000062 INF: ======================================
17-02-28 20:11:58.818 -08 000000102 INF: ======================================
17-02-28 20:11:58.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:58.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:11:58.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:58.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:11:58.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:58.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:11:58.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:58.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:11:58.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:58.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827===================
17-02-28 20:11:58.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827===================
17-02-28 20:11:58.822 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module..., Waiting for image analysis===================
17-02-28 20:11:58.822 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:11:58.822 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:11:58.822 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827===================
17-02-28 20:11:58.845 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:11:58.845 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:11:58.846 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827===================
17-02-28 20:11:58.846 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:58.846 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827===================
17-02-28 20:11:58.846 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:11:58.846 -08 000000042 INF: Transformed XStagePosition from 89.09118 mm to 89.0808288939297 mm.
17-02-28 20:11:58.860 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5762078015842 mm.
17-02-28 20:11:58.860 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3762078015842 mm.
17-02-28 20:11:58.860 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4669578015842 mm.
17-02-28 20:11:58.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:58.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:11:58.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:11:58.863 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -101.4 um, section = H_1
17-02-28 20:11:58.868 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:58.869 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:11:58.877 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:11:58.879 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:11:58.879 -08 000000076 INF: ===================MoveEmissionFilters===================
17-02-28 20:11:58.879 -08 000000037 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:11:58.880 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:11:58.882 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:11:58.883 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:11:58.884 -08 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:11:58.884 -08 000000095 INF: ===================Move X,Y===================
17-02-28 20:11:58.884 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:11:58.884 -08 000000074 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:11:58.885 -08 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:11:58.885 -08 000000074 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:11:58.886 -08 000000095 INF: ===================Move X,Y, Parallel===================
17-02-28 20:11:58.886 -08 000000053 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:11:58.887 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:11:58.887 -08 000000053 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:11:58.887 -08 000000102 INF: ===================Camera Arm TDI===================
17-02-28 20:11:58.887 -08 000000083 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:11:58.887 -08 000000039 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:11:58.887 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:58.888 -08 000000039 INF: ======================================
17-02-28 20:11:58.888 -08 000000102 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:11:58.888 -08 000000083 INF: ======================================
17-02-28 20:11:58.888 -08 000000089 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:11:58.888 -08 000000101 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:11:58.889 -08 000000089 INF: ======================================
17-02-28 20:11:58.889 -08 000000102 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:11:58.889 -08 000000101 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:11:58.889 -08 000000101 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:11:58.889 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2102 Request: {"Cycle":2,"Lane":8,"Tile":2102,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF190","HCSMMF269","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:58.889 -08 000000055 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:11:58.889 -08 000000055 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:11:58.890 -08 000000055 INF: ======================================
17-02-28 20:11:58.890 -08 000000083 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:11:58.890 -08 000000039 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:11:58.890 -08 000000083 INF: ======================================
17-02-28 20:11:58.890 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:11:58.890 -08 000000039 INF: ======================================
17-02-28 20:11:58.891 -08 000000089 INF: Y Motor: Moving to 64.5762 mm @25.000 mm/sec, started at 14.9255 mm
17-02-28 20:11:58.891 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:11:58.891 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:11:58.891 -08 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:11:58.892 -08 000000055 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:11:58.892 -08 000000090 INF: ======================================
17-02-28 20:11:58.892 -08 000000074 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:11:58.893 -08 000000055 INF: ======================================
17-02-28 20:11:58.893 -08 000000047 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:11:58.893 -08 000000047 INF: ======================================
17-02-28 20:11:58.896 -08 000000074 INF: ======================================
17-02-28 20:11:58.897 -08 000000053 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:11:58.900 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:11:58.901 -08 000000053 INF: ======================================
17-02-28 20:11:58.902 -08 000000086 INF: ======================================
17-02-28 20:11:58.912 -08 000000087 INF: ===================Move X Motor without settling===================
17-02-28 20:11:58.912 -08 000000087 INF: X Motor: Xmit PR VM\n
17-02-28 20:11:58.959 -08 000000076 INF: ======================================
17-02-28 20:11:58.966 -08 000000105 INF: FPGA: Recv ZSEL 
17-02-28 20:11:58.967 -08 000000101 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:11:58.967 -08 000000101 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:11:58.979 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:11:58.979 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:11:58.979 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:11:58.980 -08 000000087 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:11:58.980 -08 000000087 INF: X Motor: Xmit PR VI\n
17-02-28 20:11:59.028 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2101 Request: {"Cycle":2,"Lane":8,"Tile":2101,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF255","HCSMMF254","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.030 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2111 Request: {"Cycle":2,"Lane":8,"Tile":2111,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF177","HCSMMF275","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.032 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2103 Request: {"Cycle":2,"Lane":8,"Tile":2103,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF279","HCSMMF245","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.034 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2108 Request: {"Cycle":2,"Lane":8,"Tile":2108,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF242","HCSMMF236","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.041 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2114 Request: {"Cycle":2,"Lane":8,"Tile":2114,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF261","HCSMMF202","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.050 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2109 Request: {"Cycle":2,"Lane":8,"Tile":2109,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF208","HCSMMF247","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.051 -08 000000057 INF: FPGA: Recv TDIBB
17-02-28 20:11:59.052 -08 000000101 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:11:59.054 -08 000000087 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:11:59.054 -08 000000087 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:11:59.054 -08 000000087 INF: X Motor: Moving to 89.0808 mm @15.000 mm/sec, started at 87.9795 mm
17-02-28 20:11:59.054 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:11:59.054 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:11:59.054 -08 000000087 INF: X Motor: Xmit MA 12321\n
17-02-28 20:11:59.054 -08 000000101 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:11:59.055 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2105 Request: {"Cycle":2,"Lane":8,"Tile":2105,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF258","HCSMMF259","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.055 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:59.059 -08 000000101 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:11:59.059 -08 000000101 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:11:59.059 -08 000000101 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:11:59.063 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2106 Request: {"Cycle":2,"Lane":8,"Tile":2106,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF187","HCSMMF217","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.064 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2107 Request: {"Cycle":2,"Lane":8,"Tile":2107,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF232","HCSMMF212","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.066 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2115 Request: {"Cycle":2,"Lane":8,"Tile":2115,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF241","HCSMMF251","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.067 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2104 Request: {"Cycle":2,"Lane":8,"Tile":2104,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF205","HCSMMF211","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.068 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2110 Request: {"Cycle":2,"Lane":8,"Tile":2110,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF181","HCSMMF240","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.069 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2112 Request: {"Cycle":2,"Lane":8,"Tile":2112,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF188","HCSMMF207","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.069 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2116 Request: {"Cycle":2,"Lane":8,"Tile":2116,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF252","HCSMMF179","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.070 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2118 Request: {"Cycle":2,"Lane":8,"Tile":2118,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF228","HCSMMF246","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.071 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2113 Request: {"Cycle":2,"Lane":8,"Tile":2113,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF262","HCSMMF227","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.072 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2120 Request: {"Cycle":2,"Lane":8,"Tile":2120,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF280","HCSMMF231","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.072 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2119 Request: {"Cycle":2,"Lane":8,"Tile":2119,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF264","HCSMMF256","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.074 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2123 Request: {"Cycle":2,"Lane":8,"Tile":2123,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF272","HCSMMF214","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.074 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2121 Request: {"Cycle":2,"Lane":8,"Tile":2121,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF223","HCSMMF284","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.075 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2126 Request: {"Cycle":2,"Lane":8,"Tile":2126,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF178","HCSMMF230","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.076 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2127 Request: {"Cycle":2,"Lane":8,"Tile":2127,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF196","HCSMMF229","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.077 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2128 Request: {"Cycle":2,"Lane":8,"Tile":2128,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF274","HCSMMF224","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.077 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2122 Request: {"Cycle":2,"Lane":8,"Tile":2122,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF263","HCSMMF186","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.079 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2124 Request: {"Cycle":2,"Lane":8,"Tile":2124,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF199","HCSMMF278","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.079 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2125 Request: {"Cycle":2,"Lane":8,"Tile":2125,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF194","HCSMMF218","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.081 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2117 Request: {"Cycle":2,"Lane":8,"Tile":2117,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF277","HCSMMF268","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:11:59.083 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:59.089 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:11:59.113 -08 000000047 INF: FPGA: Recv ZSTEP 
17-02-28 20:11:59.113 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:59.115 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:11:59.115 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:11:59.115 -08 000000087 INF: X Motor: Recv MA 12321\r\n>
17-02-28 20:11:59.115 -08 000000089 INF: Y Motor: Set target position to 5957621 encoder counts
17-02-28 20:11:59.115 -08 000000089 INF: Y Motor: Xmit s r0xca 5957621\r
17-02-28 20:11:59.115 -08 000000087 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:11:59.115 -08 000000101 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:11:59.116 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:59.117 -08 000000101 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:11:59.117 -08 000000101 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:11:59.117 -08 000000101 INF: Z Motor: Arming to move to -0.0614 mm
17-02-28 20:11:59.117 -08 000000101 INF: FPGA: Xmit ZYT 6437621 4\n
17-02-28 20:11:59.175 -08 000000030 INF: FPGA: Recv ZYT 
17-02-28 20:11:59.175 -08 000000101 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492545 enc / 14.925 mm / ) = 6437621 enc / 64.376 mm
17-02-28 20:11:59.175 -08 000000101 INF: FPGA: Xmit ZARM 16086\n
17-02-28 20:11:59.177 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:11:59.177 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:11:59.177 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:11:59.178 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:59.178 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:11:59.216 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:59.222 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:11:59.237 -08 000000098 INF: FPGA: Recv ZARM
17-02-28 20:11:59.237 -08 000000101 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8432 ms
17-02-28 20:11:59.237 -08 000000101 INF: Z Motor: ArmAbsStepped took 119.4794 ms
17-02-28 20:11:59.237 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:11:59.239 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:11:59.239 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:11:59.239 -08 000000089 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:11:59.239 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:59.240 -08 000000101 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:11:59.241 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:11:59.242 -08 000000101 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:11:59.242 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:11:59.244 -08 000000101 INF: ======================================
17-02-28 20:11:59.311 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:59.317 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:11:59.366 -08 000000089 INF: Y Motor: Unshifted Position: 1078880
17-02-28 20:11:59.416 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:59.416 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:59.421 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:11:59.485 -08 000000102 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:11:59.486 -08 000000102 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:11:59.486 -08 000000102 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:11:59.501 -08 000000102 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:11:59.503 -08 000000102 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:11:59.518 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:11:59.540 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:59.676 -08 000000089 INF: Y Motor: Unshifted Position: 1786698
17-02-28 20:11:59.726 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:59.738 -08 000000087 INF: X Motor: Xmit PR ER\n
17-02-28 20:11:59.804 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:11:59.806 -08 000000087 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:11:59.806 -08 000000087 INF: X Motor: Moved to 89.0806 after 690 ms
17-02-28 20:11:59.806 -08 000000087 INF: ======================================
17-02-28 20:11:59.854 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:11:59.991 -08 000000089 INF: Y Motor: Unshifted Position: 2561735
17-02-28 20:12:00.041 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:00.105 -08 000000102 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:12:00.105 -08 000000102 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:12:00.105 -08 000000102 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:12:00.121 -08 000000102 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:12:00.122 -08 000000102 INF: ===================Camera Arm TDI===================
17-02-28 20:12:00.123 -08 000000102 INF: ======================================
17-02-28 20:12:00.124 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:12:00.125 -08 000000037 INF: ======================================
17-02-28 20:12:00.164 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:00.301 -08 000000089 INF: Y Motor: Unshifted Position: 3345004
17-02-28 20:12:00.351 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:00.475 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:00.614 -08 000000089 INF: Y Motor: Unshifted Position: 4120081
17-02-28 20:12:00.664 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:00.788 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:00.924 -08 000000089 INF: Y Motor: Unshifted Position: 4903355
17-02-28 20:12:00.974 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:01.102 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:01.236 -08 000000089 INF: Y Motor: Unshifted Position: 5682778
17-02-28 20:12:01.286 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:01.414 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:01.550 -08 000000089 INF: Y Motor: Unshifted Position: 5957624
17-02-28 20:12:01.550 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:12:01.550 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:01.613 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:12:01.613 -08 000000089 INF: Y Motor: Moved to 64.5762 after 2374 ms
17-02-28 20:12:01.613 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:12:01.674 -08 000000089 INF: Y Motor: Recv v 4096\r
17-02-28 20:12:01.674 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:12:01.674 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:01.750 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:12:01.750 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:01.750 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:12:01.797 -08 000000089 INF: Y Motor: Recv v 402653184\r
17-02-28 20:12:01.797 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:12:01.797 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:12:01.797 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:12:01.863 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:12:01.863 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:12:01.863 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:12:01.863 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:01.923 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:12:01.923 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:12:01.923 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:01.985 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:12:01.985 -08 000000089 INF: ======================================
17-02-28 20:12:01.986 -08 000000095 INF: ===================Move X,Y===================
17-02-28 20:12:01.987 -08 000000095 INF: ======================================
17-02-28 20:12:01.988 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:01.989 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:12:01.989 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:12:01.989 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:12:02.049 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:12:02.049 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:12:02.112 -08 000000076 INF: FPGA: Recv ZFREQCL
17-02-28 20:12:02.113 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:12:02.113 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:12:02.113 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:12:02.172 -08 000000110 INF: FPGA: Recv TDIYERD 6457622
17-02-28 20:12:02.172 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457622 counts (64.576 mm)
17-02-28 20:12:02.173 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:02.173 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:02.174 -08 000000054 INF: ===================TDI FPGA Arm===================
17-02-28 20:12:02.174 -08 000000052 INF: ===================Set YMotor gains for scans===================
17-02-28 20:12:02.174 -08 000000052 INF: ======================================
17-02-28 20:12:02.174 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:12:02.175 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:12:02.175 -08 000000054 INF: FPGA: Xmit TDIYPOS 6346696\n
17-02-28 20:12:02.234 -08 000000066 INF: FPGA: Recv TDIYPOS
17-02-28 20:12:02.235 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:12:02.236 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:12:02.237 -08 000000054 INF: FPGA: Xmit TDIYARM3 139264 6437621 1 1\n
17-02-28 20:12:02.297 -08 000000084 INF: FPGA: Recv TDIYARM3
17-02-28 20:12:02.298 -08 000000054 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:12:02.299 -08 000000054 INF: ===================TDI FPGA Arm===================
17-02-28 20:12:02.300 -08 000000054 INF: ======================================
17-02-28 20:12:02.301 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:02.301 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:12:02.302 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:12:02.302 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:12:02.303 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:12:02.303 -08 000000105 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:12:02.304 -08 000000090 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:12:02.304 -08 000000105 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:12:02.304 -08 000000105 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:12:02.304 -08 000000105 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:12:02.304 -08 000000090 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:12:02.304 -08 000000105 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:12:02.304 -08 000000090 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:12:02.304 -08 000000090 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:12:02.305 -08 000000090 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:12:02.669 -08 000000106 INF: FPGA: Recv EX2MV
17-02-28 20:12:02.669 -08 000000106 INF: FPGA: Recv EX1MV
17-02-28 20:12:02.669 -08 000000105 INF: Excitation Filter 2: Moved -107 steps in 365.3009 ms
17-02-28 20:12:02.669 -08 000000090 INF: Excitation Filter 1: Moved -107 steps in 365.1686 ms
17-02-28 20:12:02.669 -08 000000105 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.4328 ms
17-02-28 20:12:02.669 -08 000000105 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.54 ms
17-02-28 20:12:02.669 -08 000000090 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.3544 ms
17-02-28 20:12:02.669 -08 000000090 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.5727 ms
17-02-28 20:12:02.670 -08 000000105 INF: ======================================
17-02-28 20:12:02.670 -08 000000090 INF: ======================================
17-02-28 20:12:02.671 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:12:02.672 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:12:02.673 -08 000000044 INF: ===================Camera TDI===================
17-02-28 20:12:02.673 -08 000000068 INF: ===================FPGA Z Wait===================
17-02-28 20:12:02.673 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:12:02.673 -08 000000068 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:12:02.673 -08 000000089 INF: Y Motor: Moving to 14.9279 mm @6.500 mm/sec, started at 64.5762 mm
17-02-28 20:12:02.673 -08 000000102 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:02.673 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:12:02.673 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:02.673 -08 000000044 INF: ===================Camera TDI, Parallel===================
17-02-28 20:12:02.674 -08 000000102 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:12:02.674 -08 000000102 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:12:02.674 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:12:02.674 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:12:02.676 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:02.676 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:02.678 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:02.678 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:02.733 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:12:02.733 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:12:02.733 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:02.798 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:12:02.798 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:02.826 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:02.826 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:02.828 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:02.828 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:02.859 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:12:02.859 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:02.859 -08 000000089 INF: Y Motor: Set target position to 992787 encoder counts
17-02-28 20:12:02.859 -08 000000089 INF: Y Motor: Xmit s r0xca 992787\r
17-02-28 20:12:02.921 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:12:02.921 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:12:02.921 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:12:02.976 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:02.976 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:02.978 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:02.978 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:02.985 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:12:02.985 -08 000000089 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:12:02.985 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:03.045 -08 000000052 INF: FPGA: Recv ZWAIT 
17-02-28 20:12:03.045 -08 000000068 INF: ======================================
17-02-28 20:12:03.109 -08 000000089 INF: Y Motor: Unshifted Position: 5894685
17-02-28 20:12:03.126 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:12:03.126 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:12:03.126 -08 000000010 INF: ===================Camera #0 Frame #5===================
17-02-28 20:12:03.128 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:12:03.128 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:12:03.128 -08 000000074 INF: ===================Camera #2 Frame #5===================
17-02-28 20:12:03.159 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:03.283 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:03.292 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:12:03.292 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:12:03.292 -08 000000010 INF: ===================Camera #0 Frame #11===================
17-02-28 20:12:03.294 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:12:03.294 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:12:03.294 -08 000000074 INF: ===================Camera #2 Frame #11===================
17-02-28 20:12:03.421 -08 000000089 INF: Y Motor: Unshifted Position: 5691666
17-02-28 20:12:03.460 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:12:03.460 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:12:03.460 -08 000000010 INF: ===================Camera #0 Frame #17===================
17-02-28 20:12:03.463 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:12:03.463 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:12:03.463 -08 000000074 INF: ===================Camera #2 Frame #17===================
17-02-28 20:12:03.471 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:03.597 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:03.628 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:12:03.628 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:12:03.628 -08 000000010 INF: ===================Camera #0 Frame #23===================
17-02-28 20:12:03.632 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:12:03.632 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:12:03.632 -08 000000074 INF: ===================Camera #2 Frame #23===================
17-02-28 20:12:03.733 -08 000000089 INF: Y Motor: Unshifted Position: 5484544
17-02-28 20:12:03.783 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:03.796 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:12:03.796 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:12:03.796 -08 000000010 INF: ===================Camera #0 Frame #29===================
17-02-28 20:12:03.801 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:12:03.801 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:12:03.801 -08 000000074 INF: ===================Camera #2 Frame #29===================
17-02-28 20:12:03.908 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:03.964 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:12:03.964 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:12:03.964 -08 000000010 INF: ===================Camera #0 Frame #35===================
17-02-28 20:12:03.970 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:12:03.970 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:12:03.970 -08 000000074 INF: ===================Camera #2 Frame #36===================
17-02-28 20:12:04.046 -08 000000089 INF: Y Motor: Unshifted Position: 5287157
17-02-28 20:12:04.096 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:04.132 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:12:04.132 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:12:04.132 -08 000000010 INF: ===================Camera #0 Frame #42===================
17-02-28 20:12:04.142 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:12:04.142 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:12:04.142 -08 000000074 INF: ===================Camera #2 Frame #42===================
17-02-28 20:12:04.219 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:04.303 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:12:04.303 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:12:04.303 -08 000000010 INF: ===================Camera #0 Frame #48===================
17-02-28 20:12:04.311 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:12:04.311 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:12:04.311 -08 000000074 INF: ===================Camera #2 Frame #48===================
17-02-28 20:12:04.357 -08 000000089 INF: Y Motor: Unshifted Position: 5082832
17-02-28 20:12:04.407 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:04.473 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:12:04.473 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:12:04.473 -08 000000010 INF: ===================Camera #0 Frame #54===================
17-02-28 20:12:04.482 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:12:04.482 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:12:04.482 -08 000000074 INF: ===================Camera #2 Frame #54===================
17-02-28 20:12:04.533 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:04.643 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:12:04.643 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:12:04.643 -08 000000010 INF: ===================Camera #0 Frame #60===================
17-02-28 20:12:04.653 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:12:04.653 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:12:04.653 -08 000000074 INF: ===================Camera #2 Frame #61===================
17-02-28 20:12:04.668 -08 000000089 INF: Y Motor: Unshifted Position: 4880684
17-02-28 20:12:04.718 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:04.813 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:12:04.813 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:12:04.813 -08 000000010 INF: ===================Camera #0 Frame #67===================
17-02-28 20:12:04.827 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:12:04.827 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:12:04.827 -08 000000074 INF: ===================Camera #2 Frame #67===================
17-02-28 20:12:04.844 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:04.982 -08 000000089 INF: Y Motor: Unshifted Position: 4678321
17-02-28 20:12:04.986 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:12:04.986 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:12:04.986 -08 000000010 INF: ===================Camera #0 Frame #73===================
17-02-28 20:12:04.998 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:12:04.998 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:12:04.998 -08 000000074 INF: ===================Camera #2 Frame #73===================
17-02-28 20:12:05.032 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:05.155 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:12:05.155 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:12:05.155 -08 000000010 INF: ===================Camera #0 Frame #79===================
17-02-28 20:12:05.156 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:05.169 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:12:05.169 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:12:05.169 -08 000000074 INF: ===================Camera #2 Frame #80===================
17-02-28 20:12:05.292 -08 000000089 INF: Y Motor: Unshifted Position: 4473556
17-02-28 20:12:05.325 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:12:05.325 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:12:05.325 -08 000000010 INF: ===================Camera #0 Frame #85===================
17-02-28 20:12:05.342 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:05.343 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:12:05.343 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:12:05.343 -08 000000074 INF: ===================Camera #2 Frame #86===================
17-02-28 20:12:05.468 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:05.495 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:12:05.495 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:12:05.495 -08 000000010 INF: ===================Camera #0 Frame #92===================
17-02-28 20:12:05.514 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:12:05.514 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:12:05.514 -08 000000074 INF: ===================Camera #2 Frame #92===================
17-02-28 20:12:05.606 -08 000000089 INF: Y Motor: Unshifted Position: 4272492
17-02-28 20:12:05.656 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:05.668 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:12:05.668 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:12:05.668 -08 000000010 INF: ===================Camera #0 Frame #98===================
17-02-28 20:12:05.685 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:12:05.685 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:12:05.685 -08 000000074 INF: ===================Camera #2 Frame #99===================
17-02-28 20:12:05.779 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:05.838 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:12:05.838 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:12:05.838 -08 000000010 INF: ===================Camera #0 Frame #104===================
17-02-28 20:12:05.859 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:12:05.859 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:12:05.859 -08 000000074 INF: ===================Camera #2 Frame #105===================
17-02-28 20:12:05.917 -08 000000089 INF: Y Motor: Unshifted Position: 4068390
17-02-28 20:12:05.967 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:06.008 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:12:06.008 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:12:06.008 -08 000000010 INF: ===================Camera #0 Frame #111===================
17-02-28 20:12:06.030 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:12:06.030 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:12:06.030 -08 000000074 INF: ===================Camera #2 Frame #111===================
17-02-28 20:12:06.093 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:06.181 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:12:06.181 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:12:06.181 -08 000000010 INF: ===================Camera #0 Frame #117===================
17-02-28 20:12:06.201 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:12:06.201 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:12:06.201 -08 000000074 INF: ===================Camera #2 Frame #118===================
17-02-28 20:12:06.229 -08 000000089 INF: Y Motor: Unshifted Position: 3865370
17-02-28 20:12:06.279 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:06.352 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:12:06.352 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:12:06.352 -08 000000010 INF: ===================Camera #0 Frame #123===================
17-02-28 20:12:06.376 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:12:06.376 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:12:06.376 -08 000000074 INF: ===================Camera #2 Frame #124===================
17-02-28 20:12:06.406 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:06.522 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:12:06.522 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:12:06.522 -08 000000010 INF: ===================Camera #0 Frame #130===================
17-02-28 20:12:06.541 -08 000000089 INF: Y Motor: Unshifted Position: 3662567
17-02-28 20:12:06.547 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:12:06.547 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:12:06.547 -08 000000074 INF: ===================Camera #2 Frame #130===================
17-02-28 20:12:06.591 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:06.695 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:12:06.695 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:12:06.695 -08 000000010 INF: ===================Camera #0 Frame #136===================
17-02-28 20:12:06.717 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:06.718 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:12:06.718 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:12:06.718 -08 000000074 INF: ===================Camera #2 Frame #137===================
17-02-28 20:12:06.855 -08 000000089 INF: Y Motor: Unshifted Position: 3460859
17-02-28 20:12:06.865 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:12:06.865 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:12:06.865 -08 000000010 INF: ===================Camera #0 Frame #142===================
17-02-28 20:12:06.892 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:12:06.892 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:12:06.892 -08 000000074 INF: ===================Camera #2 Frame #143===================
17-02-28 20:12:06.905 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:07.028 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:07.035 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:12:07.035 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:12:07.035 -08 000000010 INF: ===================Camera #0 Frame #148===================
17-02-28 20:12:07.063 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:12:07.063 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:12:07.063 -08 000000074 INF: ===================Camera #2 Frame #149===================
17-02-28 20:12:07.166 -08 000000089 INF: Y Motor: Unshifted Position: 3256758
17-02-28 20:12:07.205 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:12:07.205 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:12:07.205 -08 000000010 INF: ===================Camera #0 Frame #155===================
17-02-28 20:12:07.216 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:07.234 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:12:07.234 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:12:07.234 -08 000000074 INF: ===================Camera #2 Frame #156===================
17-02-28 20:12:07.340 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:07.378 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:12:07.378 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:12:07.378 -08 000000010 INF: ===================Camera #0 Frame #161===================
17-02-28 20:12:07.408 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:12:07.408 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:12:07.408 -08 000000074 INF: ===================Camera #2 Frame #162===================
17-02-28 20:12:07.478 -08 000000089 INF: Y Motor: Unshifted Position: 3053744
17-02-28 20:12:07.528 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:07.548 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:12:07.548 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:12:07.548 -08 000000010 INF: ===================Camera #0 Frame #167===================
17-02-28 20:12:07.579 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:12:07.579 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:12:07.579 -08 000000074 INF: ===================Camera #2 Frame #168===================
17-02-28 20:12:07.651 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:07.718 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:12:07.718 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:12:07.718 -08 000000010 INF: ===================Camera #0 Frame #174===================
17-02-28 20:12:07.750 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:12:07.750 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:12:07.750 -08 000000074 INF: ===================Camera #2 Frame #175===================
17-02-28 20:12:07.789 -08 000000089 INF: Y Motor: Unshifted Position: 2851382
17-02-28 20:12:07.839 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:07.891 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:12:07.891 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:12:07.891 -08 000000010 INF: ===================Camera #0 Frame #180===================
17-02-28 20:12:07.924 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:12:07.924 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:12:07.924 -08 000000074 INF: ===================Camera #2 Frame #181===================
17-02-28 20:12:07.965 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:08.061 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:12:08.061 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:12:08.061 -08 000000010 INF: ===================Camera #0 Frame #186===================
17-02-28 20:12:08.095 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:12:08.095 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:12:08.095 -08 000000074 INF: ===================Camera #2 Frame #187===================
17-02-28 20:12:08.100 -08 000000089 INF: Y Motor: Unshifted Position: 2649236
17-02-28 20:12:08.150 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:08.231 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:12:08.231 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:12:08.231 -08 000000010 INF: ===================Camera #0 Frame #192===================
17-02-28 20:12:08.265 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:12:08.265 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:12:08.265 -08 000000074 INF: ===================Camera #2 Frame #194===================
17-02-28 20:12:08.278 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:08.401 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:12:08.401 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:12:08.401 -08 000000010 INF: ===================Camera #0 Frame #199===================
17-02-28 20:12:08.414 -08 000000089 INF: Y Motor: Unshifted Position: 2445138
17-02-28 20:12:08.439 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:12:08.439 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:12:08.439 -08 000000074 INF: ===================Camera #2 Frame #200===================
17-02-28 20:12:08.464 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:08.573 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:12:08.573 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:12:08.573 -08 000000010 INF: ===================Camera #0 Frame #205===================
17-02-28 20:12:08.587 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:08.610 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:12:08.610 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:12:08.610 -08 000000074 INF: ===================Camera #2 Frame #206===================
17-02-28 20:12:08.725 -08 000000089 INF: Y Motor: Unshifted Position: 2242771
17-02-28 20:12:08.743 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:12:08.743 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:12:08.744 -08 000000010 INF: ===================Camera #0 Frame #211===================
17-02-28 20:12:08.775 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:08.781 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:12:08.781 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:12:08.781 -08 000000074 INF: ===================Camera #2 Frame #213===================
17-02-28 20:12:08.902 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:08.914 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:12:08.914 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:12:08.914 -08 000000010 INF: ===================Camera #0 Frame #218===================
17-02-28 20:12:08.955 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:12:08.955 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:12:08.955 -08 000000074 INF: ===================Camera #2 Frame #219===================
17-02-28 20:12:09.036 -08 000000089 INF: Y Motor: Unshifted Position: 2040622
17-02-28 20:12:09.086 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:09.087 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:12:09.087 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:12:09.087 -08 000000010 INF: ===================Camera #0 Frame #224===================
17-02-28 20:12:09.126 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:12:09.126 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:12:09.126 -08 000000074 INF: ===================Camera #2 Frame #225===================
17-02-28 20:12:09.213 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:09.257 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:12:09.257 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:12:09.257 -08 000000010 INF: ===================Camera #0 Frame #230===================
17-02-28 20:12:09.297 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:12:09.297 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:12:09.297 -08 000000074 INF: ===================Camera #2 Frame #232===================
17-02-28 20:12:09.349 -08 000000089 INF: Y Motor: Unshifted Position: 1836955
17-02-28 20:12:09.399 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:09.427 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:12:09.427 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:12:09.427 -08 000000010 INF: ===================Camera #0 Frame #236===================
17-02-28 20:12:09.471 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:12:09.471 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:12:09.471 -08 000000074 INF: ===================Camera #2 Frame #238===================
17-02-28 20:12:09.525 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:09.597 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:12:09.597 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:12:09.597 -08 000000010 INF: ===================Camera #0 Frame #243===================
17-02-28 20:12:09.642 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:12:09.642 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:12:09.642 -08 000000074 INF: ===================Camera #2 Frame #244===================
17-02-28 20:12:09.660 -08 000000089 INF: Y Motor: Unshifted Position: 1634584
17-02-28 20:12:09.710 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:09.770 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:12:09.770 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:12:09.770 -08 000000010 INF: ===================Camera #0 Frame #249===================
17-02-28 20:12:09.813 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:12:09.813 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:12:09.813 -08 000000074 INF: ===================Camera #2 Frame #251===================
17-02-28 20:12:09.836 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:09.940 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:12:09.940 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:12:09.940 -08 000000010 INF: ===================Camera #0 Frame #255===================
17-02-28 20:12:09.974 -08 000000089 INF: Y Motor: Unshifted Position: 1430482
17-02-28 20:12:09.987 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:12:09.987 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:12:09.987 -08 000000074 INF: ===================Camera #2 Frame #257===================
17-02-28 20:12:10.024 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:10.110 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:12:10.110 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:12:10.110 -08 000000010 INF: ===================Camera #0 Frame #262===================
17-02-28 20:12:10.147 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:10.158 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:12:10.158 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:12:10.158 -08 000000074 INF: ===================Camera #2 Frame #263===================
17-02-28 20:12:10.284 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:12:10.284 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:12:10.284 -08 000000010 INF: ===================Camera #0 Frame #268===================
17-02-28 20:12:10.286 -08 000000089 INF: Y Motor: Unshifted Position: 1228319
17-02-28 20:12:10.329 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:12:10.329 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:12:10.329 -08 000000074 INF: ===================Camera #2 Frame #270===================
17-02-28 20:12:10.336 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:10.407 -08 000000053 INF: FPGA: Recv TDIYWAIT
17-02-28 20:12:10.407 -08 000000102 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:10.409 -08 000000102 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:12:10.410 -08 000000046 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:12:10.410 -08 000000095 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:12:10.410 -08 000000046 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:12:10.410 -08 000000046 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:12:10.410 -08 000000046 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:12:10.410 -08 000000046 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:12:10.410 -08 000000095 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:12:10.410 -08 000000095 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:12:10.410 -08 000000095 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:12:10.411 -08 000000095 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:12:10.453 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:12:10.453 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:12:10.453 -08 000000010 INF: ===================Camera #0 Frame #272===================
17-02-28 20:12:10.459 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:10.466 -08 000000010 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:12:10.467 -08 000000010 INF: ===================CameraTDI Cleanup===================
17-02-28 20:12:10.597 -08 000000089 INF: Y Motor: Unshifted Position: 1020542
17-02-28 20:12:10.600 -08 000000010 INF: Camera #0 ReleaseBuffer
17-02-28 20:12:10.600 -08 000000074 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:12:10.600 -08 000000074 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:12:10.600 -08 000000074 INF: ===================Camera #2 Frame #272===================
17-02-28 20:12:10.600 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:12:10.606 -08 000000074 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:12:10.607 -08 000000074 INF: ===================CameraTDI Cleanup===================
17-02-28 20:12:10.630 -08 000000010 INF: ======================================
17-02-28 20:12:10.647 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:10.776 -08 000000074 INF: Camera #2 ReleaseBuffer
17-02-28 20:12:10.776 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:12:10.782 -08 000000032 INF: FPGA: Recv EX1MV
17-02-28 20:12:10.782 -08 000000032 INF: FPGA: Recv EX2MV
17-02-28 20:12:10.782 -08 000000095 INF: Excitation Filter 2: Moved 107 steps in 371.8591 ms
17-02-28 20:12:10.782 -08 000000046 INF: Excitation Filter 1: Moved 107 steps in 372.0933 ms
17-02-28 20:12:10.782 -08 000000095 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.0081 ms
17-02-28 20:12:10.782 -08 000000046 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.194 ms
17-02-28 20:12:10.782 -08 000000046 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.2963 ms
17-02-28 20:12:10.782 -08 000000095 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.0922 ms
17-02-28 20:12:10.782 -08 000000046 INF: ======================================
17-02-28 20:12:10.782 -08 000000095 INF: ======================================
17-02-28 20:12:10.784 -08 000000102 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:10.785 -08 000000089 INF: Y Motor: Unshifted Position: 992788
17-02-28 20:12:10.785 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:12:10.785 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:10.785 -08 000000102 INF: ======================================
17-02-28 20:12:10.811 -08 000000074 INF: ======================================
17-02-28 20:12:10.812 -08 000000044 INF: ===================Camera TDI===================
17-02-28 20:12:10.813 -08 000000044 INF: ======================================
17-02-28 20:12:10.846 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:12:10.846 -08 000000089 INF: Y Motor: Moved to 14.9279 after 7860 ms
17-02-28 20:12:10.846 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:12:10.908 -08 000000089 INF: Y Motor: Recv v 4097\r
17-02-28 20:12:10.908 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:12:10.908 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:10.972 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:12:10.972 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:10.972 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:12:11.034 -08 000000089 INF: Y Motor: Recv v 134217728\r
17-02-28 20:12:11.034 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:12:11.034 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:12:11.034 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:12:11.098 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:12:11.098 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:12:11.098 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:12:11.098 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:11.160 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:12:11.160 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:12:11.160 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:11.222 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:12:11.222 -08 000000089 INF: ======================================
17-02-28 20:12:11.223 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:12:11.224 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:12:11.225 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:12:11.225 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:12:11.281 -08 000000054 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:12:11.281 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:12:11.343 -08 000000085 INF: FPGA: Recv TDIYERD 1492788
17-02-28 20:12:11.343 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:12:11.407 -08 000000086 INF: FPGA: Recv ZADCR 22172
17-02-28 20:12:11.407 -08 000000042 INF: At scan end Y pos = 14.928 and Z pos = -0.085. Y moved -48.539 mm
17-02-28 20:12:11.407 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:12:11.469 -08 000000090 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:12:11.469 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:12:11.469 -08 000000042 INF: TDIScan finished after 12622.0597 ms
17-02-28 20:12:11.469 -08 000000042 INF: Image[0]: Y should trigger at 63.467 mm, 2nd row was at 64.376 mm (error = 0.909 mm)
17-02-28 20:12:11.469 -08 000000042 INF: Image[2]: Y should trigger at 63.467 mm, 2nd row was at 64.376 mm (error = 0.909 mm)
17-02-28 20:12:11.471 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:12:11.505 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.506 um
17-02-28 20:12:11.506 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:12:11.507 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:12:11.531 -08 000000034 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:12:11.532 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:12:11.532 -08 000000085 INF: ===================Dither Clean Up Command===================
17-02-28 20:12:11.532 -08 000000045 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:12:11.532 -08 000000055 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:12:11.532 -08 000000047 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:12:11.533 -08 000000055 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:12:11.533 -08 000000055 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:12:11.533 -08 000000045 INF: ======================================
17-02-28 20:12:11.533 -08 000000047 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:12:11.533 -08 000000047 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:12:11.533 -08 000000053 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:12:11.533 -08 000000068 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:12:11.533 -08 000000068 INF: ======================================
17-02-28 20:12:11.534 -08 000000053 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:12:11.595 -08 000000109 INF: FPGA: Recv ZSTEP 
17-02-28 20:12:11.595 -08 000000109 INF: FPGA: Recv ZSEL 
17-02-28 20:12:11.595 -08 000000053 INF: FPGA: Xmit ZDACW 26572\n
17-02-28 20:12:11.595 -08 000000047 INF: ======================================
17-02-28 20:12:11.597 -08 000000055 INF: Y Motor: Recv ok\r
17-02-28 20:12:11.597 -08 000000055 INF: ======================================
17-02-28 20:12:11.657 -08 000000032 INF: FPGA: Recv ZDACW 
17-02-28 20:12:11.657 -08 000000053 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:12:11.657 -08 000000053 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:12:11.720 -08 000000046 INF: FPGA: Recv TDIBB
17-02-28 20:12:11.721 -08 000000053 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:12:11.722 -08 000000053 INF: ======================================
17-02-28 20:12:11.723 -08 000000085 INF: ======================================
17-02-28 20:12:11.724 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:12:11.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:12:11.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:12:11.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:12:11.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:12:11.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:12:11.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:12:11.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:12:11.726 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:12:11.726 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827===================
17-02-28 20:12:11.726 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827===================
17-02-28 20:12:11.727 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module..., Waiting for image analysis===================
17-02-28 20:12:11.727 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:12:11.727 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:12:11.727 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827===================
17-02-28 20:12:11.749 -08 000000042 INF: Waited 22 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:12:11.749 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:12:11.750 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:12:11.750 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:12:11.750 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:12:11.750 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:12:11.751 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Bottom Surface===================
17-02-28 20:12:11.751 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging===================
17-02-28 20:12:11.751 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging===================
17-02-28 20:12:11.751 -08 000000042 INF: EjectButton: EjectButton LED On
17-02-28 20:12:11.751 -08 000000042 INF: FPGA: Xmit LEDMODEPB 1\n
17-02-28 20:12:11.784 -08 000000100 INF: FPGA: Recv LEDMODEPB
17-02-28 20:12:11.784 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging===================
17-02-28 20:12:11.785 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:12:11.785 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for analysis...===================
17-02-28 20:12:11.785 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:12:11.785 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging===================
17-02-28 20:12:11.785 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for user to shut the door...===================
17-02-28 20:12:11.785 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:12:11.786 -08 000000042 INF: LaserShutterArbiter: Request to Close; lock count was 0, will be 1
17-02-28 20:12:11.786 -08 000000042 INF: LaserShutter: Closing laser shutter
17-02-28 20:12:11.786 -08 000000042 INF: FPGA: Xmit SWLSRSHUT 0\n
17-02-28 20:12:11.786 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:12:11.786 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:12:11.787 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:12:11.787 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:12:11.787 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:12:11.787 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for analysis...===================
17-02-28 20:12:11.787 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:12:11.787 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Waiting for user to shut the door...===================
17-02-28 20:12:11.787 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:12:11.788 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:12:11.788 -08 000000018 INF: EjectButton: EjectButton LED Off
17-02-28 20:12:11.788 -08 000000018 INF: FPGA: Xmit LEDMODEPB 0\n
17-02-28 20:12:11.872 -08 000000081 INF: FPGA: Recv SWLSRSHUT
17-02-28 20:12:11.872 -08 000000081 INF: FPGA: Recv LEDMODEPB
17-02-28 20:12:11.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:12:11.876 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:12:11.878 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2206 Request: {"Cycle":2,"Lane":8,"Tile":2206,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF177","HCSMMF176","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:11.885 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2201 Request: {"Cycle":2,"Lane":8,"Tile":2201,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF235","HCSMMF199","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:11.970 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2204 Request: {"Cycle":2,"Lane":8,"Tile":2204,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF277","HCSMMF248","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:11.979 -08 000000018 INF: LaserShutterArbiter: Request to Open; lock count was 1, will be 0
17-02-28 20:12:11.979 -08 000000018 INF: LaserShutter: Opening laser shutter
17-02-28 20:12:11.979 -08 000000018 INF: FPGA: Xmit SWLSRSHUT 1\n
17-02-28 20:12:11.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging===================
17-02-28 20:12:11.980 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2203 Request: {"Cycle":2,"Lane":8,"Tile":2203,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF268","HCSMMF283","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:11.981 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging===================
17-02-28 20:12:11.982 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging===================
17-02-28 20:12:11.982 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry===================
17-02-28 20:12:11.983 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2202 Request: {"Cycle":2,"Lane":8,"Tile":2202,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF194","HCSMMF210","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:11.983 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry===================
17-02-28 20:12:11.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry===================
17-02-28 20:12:11.984 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2205 Request: {"Cycle":2,"Lane":8,"Tile":2205,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF253","HCSMMF181","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:11.986 -08 000000055 INF: FPGA: Recv SWLSRSHUT
17-02-28 20:12:11.986 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2207 Request: {"Cycle":2,"Lane":8,"Tile":2207,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF229","HCSMMF196","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:11.988 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2212 Request: {"Cycle":2,"Lane":8,"Tile":2212,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF200","HCSMMF284","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:11.990 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2210 Request: {"Cycle":2,"Lane":8,"Tile":2210,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF239","HCSMMF191","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:11.999 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2209 Request: {"Cycle":2,"Lane":8,"Tile":2209,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF215","HCSMMF271","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.002 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2211 Request: {"Cycle":2,"Lane":8,"Tile":2211,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF262","HCSMMF243","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.005 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2214 Request: {"Cycle":2,"Lane":8,"Tile":2214,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF252","HCSMMF260","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.007 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2216 Request: {"Cycle":2,"Lane":8,"Tile":2216,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF197","HCSMMF190","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.008 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2213 Request: {"Cycle":2,"Lane":8,"Tile":2213,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF227","HCSMMF192","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.010 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:12.010 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2215 Request: {"Cycle":2,"Lane":8,"Tile":2215,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF178","HCSMMF254","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.012 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2218 Request: {"Cycle":2,"Lane":8,"Tile":2218,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF224","HCSMMF287","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.015 -08 000000110 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2208 Request: {"Cycle":2,"Lane":8,"Tile":2208,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF249","HCSMMF208","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.016 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2223 Request: {"Cycle":2,"Lane":8,"Tile":2223,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF281","HCSMMF251","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.018 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2217 Request: {"Cycle":2,"Lane":8,"Tile":2217,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF222","HCSMMF247","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.021 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2222 Request: {"Cycle":2,"Lane":8,"Tile":2222,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF207","HCSMMF231","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.023 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2221 Request: {"Cycle":2,"Lane":8,"Tile":2221,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF184","HCSMMF244","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.024 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2219 Request: {"Cycle":2,"Lane":8,"Tile":2219,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF212","HCSMMF232","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.025 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2224 Request: {"Cycle":2,"Lane":8,"Tile":2224,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF286","HCSMMF202","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.029 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2225 Request: {"Cycle":2,"Lane":8,"Tile":2225,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF259","HCSMMF234","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.031 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2227 Request: {"Cycle":2,"Lane":8,"Tile":2227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF250","HCSMMF246","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.033 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2220 Request: {"Cycle":2,"Lane":8,"Tile":2220,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF255","HCSMMF193","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.035 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2228 Request: {"Cycle":2,"Lane":8,"Tile":2228,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF204","HCSMMF256","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.036 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 2 Tile: 2226 Request: {"Cycle":2,"Lane":8,"Tile":2226,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF276","HCSMMF264","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:12.038 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:12:12.044 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:12:12.048 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:12.048 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Selecting Reagent HB2 (8)===================
17-02-28 20:12:12.048 -08 000000042 INF: Valve B1: Go to position 8
17-02-28 20:12:12.048 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:12:12.086 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:12:12.086 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:12:12.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:12:12.087 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:12:12.087 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:12:12.111 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 3\r
17-02-28 20:12:12.111 -08 000000042 INF: Valve B1: 625.475 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:12:12.111 -08 000000042 INF: Valve B1: Taking longest path 'CC' from 3 to 8 to avoid 7
17-02-28 20:12:12.111 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CC8\r
17-02-28 20:12:12.111 -08 000000042 INF: SerialPort B1 (VICIB1): Recv  (discarded)
17-02-28 20:12:12.111 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:12:12.126 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:12:12.126 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:12:12.163 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:12:12.169 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:12:12.256 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:12:12.262 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:12:12.394 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:12:12.399 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:12:12.484 -08 000000102 INF: FPGA: Recv MIOCOMPF
17-02-28 20:12:12.484 -08 000000018 INF: Compensator: Moved IntoPath in 397 ms
17-02-28 20:12:12.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:12:12.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:12:12.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:12:12.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:12:12.487 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:12:12.487 -08 000000090 INF: ===================Move Tilt Motor 1===================
17-02-28 20:12:12.487 -08 000000037 INF: ===================Move Tilt Motor 2===================
17-02-28 20:12:12.487 -08 000000098 INF: ===================Move Tilt Motor 3===================
17-02-28 20:12:12.487 -08 000000090 INF: Tilt Motor 1: Moving to 5.1796 mm, started at 4.9792 mm, delta = 0.2004 mm
17-02-28 20:12:12.487 -08 000000090 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:12.487 -08 000000037 INF: Tilt Motor 2: Moving to 5.2428 mm, started at 5.4531 mm, delta = -0.2103 mm
17-02-28 20:12:12.488 -08 000000098 INF: Tilt Motor 3: Moving to 5.2695 mm, started at 5.3985 mm, delta = -0.1290 mm
17-02-28 20:12:12.489 -08 000000098 INF: FPGA: Xmit T3RD\n
17-02-28 20:12:12.490 -08 000000037 INF: FPGA: Xmit T2RD\n
17-02-28 20:12:12.495 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:12:12.546 -08 000000109 INF: FPGA: Recv T1RD 19602
17-02-28 20:12:12.546 -08 000000109 INF: FPGA: Recv T3RD 21254
17-02-28 20:12:12.546 -08 000000109 INF: FPGA: Recv T2RD 21469
17-02-28 20:12:12.546 -08 000000037 INF: Tilt Motor 2: Encoder: at motor step 3578 + 1/6
17-02-28 20:12:12.546 -08 000000037 INF: Tilt Motor 2: Moving to 20641 encoder counts
17-02-28 20:12:12.546 -08 000000037 INF: FPGA: Xmit T2MOVETO 20641\n
17-02-28 20:12:12.546 -08 000000090 INF: Tilt Motor 1: Encoder: at motor step 3267 + 0/6
17-02-28 20:12:12.546 -08 000000090 INF: Tilt Motor 1: Moving to 20392 encoder counts
17-02-28 20:12:12.547 -08 000000090 INF: FPGA: Xmit T1MOVETO 20392\n
17-02-28 20:12:12.547 -08 000000098 INF: Tilt Motor 3: Encoder: at motor step 3542 + 2/6
17-02-28 20:12:12.547 -08 000000098 INF: Tilt Motor 3: Moving to 20746 encoder counts
17-02-28 20:12:12.548 -08 000000098 INF: FPGA: Xmit T3MOVETO 20746\n
17-02-28 20:12:12.734 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 8\r
17-02-28 20:12:12.734 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry===================
17-02-28 20:12:12.734 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Opening shutoff valve===================
17-02-28 20:12:12.781 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:12:12.795 -08 000000039 INF: FPGA: Recv T3MOVETO 84
17-02-28 20:12:12.795 -08 000000098 INF: Tilt Motor 3: To move from 5.399 to 5.269 (-0.129 mm) should take 85 steps, but required 84 steps (0.128 mm). Slippage = -0.002 mm (0.01%)
17-02-28 20:12:12.795 -08 000000098 INF: FPGA: Xmit T3RD\n
17-02-28 20:12:12.857 -08 000000062 INF: FPGA: Recv T3RD 20752
17-02-28 20:12:12.857 -08 000000062 INF: FPGA: Recv T1MOVETO 131
17-02-28 20:12:12.857 -08 000000062 INF: FPGA: Recv T2MOVETO 138
17-02-28 20:12:12.857 -08 000000037 INF: Tilt Motor 2: To move from 5.453 to 5.243 (-0.210 mm) should take 138 steps, but required 138 steps (0.210 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:12:12.857 -08 000000098 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:12:12.857 -08 000000037 INF: FPGA: Xmit T2RD\n
17-02-28 20:12:12.857 -08 000000090 INF: Tilt Motor 1: To move from 4.979 to 5.180 (0.200 mm) should take 132 steps, but required 131 steps (0.200 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:12:12.858 -08 000000090 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:12.860 -08 000000098 INF: FPGA: Xmit T3RD\n
17-02-28 20:12:12.921 -08 000000058 INF: FPGA: Recv T2RD 20642
17-02-28 20:12:12.921 -08 000000058 INF: FPGA: Recv T1RD 20388
17-02-28 20:12:12.921 -08 000000058 INF: FPGA: Recv T3RD 20752
17-02-28 20:12:12.921 -08 000000098 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:12:12.921 -08 000000098 INF: FPGA: Xmit T3RD\n
17-02-28 20:12:12.921 -08 000000090 INF: Tilt Motor 1: Encoder: at motor step 3398 + 0/6
17-02-28 20:12:12.921 -08 000000037 INF: Tilt Motor 2: Encoder: at motor step 3440 + 2/6
17-02-28 20:12:12.922 -08 000000090 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:12.924 -08 000000037 INF: FPGA: Xmit T2RD\n
17-02-28 20:12:12.983 -08 000000102 INF: FPGA: Recv T3RD 20752
17-02-28 20:12:12.983 -08 000000102 INF: FPGA: Recv T1RD 20388
17-02-28 20:12:12.983 -08 000000102 INF: FPGA: Recv T2RD 20642
17-02-28 20:12:12.983 -08 000000037 INF: Tilt Motor 2: Encoder: at motor step 3440 + 2/6
17-02-28 20:12:12.983 -08 000000098 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:12:12.983 -08 000000037 INF: FPGA: Xmit T2RD\n
17-02-28 20:12:12.983 -08 000000098 INF: Tilt Motor 3: After move to 5.2695, error = 0.0015, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:12:12.983 -08 000000098 INF: Tilt Motor 3: Moved to 5.2710 after 495.7241 ms
17-02-28 20:12:12.983 -08 000000090 INF: Tilt Motor 1: Encoder: at motor step 3398 + 0/6
17-02-28 20:12:12.984 -08 000000098 INF: ======================================
17-02-28 20:12:12.984 -08 000000090 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:13.049 -08 000000039 INF: FPGA: Recv T2RD 20642
17-02-28 20:12:13.050 -08 000000039 INF: FPGA: Recv T1RD 20388
17-02-28 20:12:13.050 -08 000000090 INF: Tilt Motor 1: Encoder: at motor step 3398 + 0/6
17-02-28 20:12:13.050 -08 000000037 INF: Tilt Motor 2: Encoder: at motor step 3440 + 2/6
17-02-28 20:12:13.050 -08 000000037 INF: Tilt Motor 2: After move to 5.2428, error = 0.0003, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:12:13.050 -08 000000090 INF: Tilt Motor 1: After move to 5.1796, error = -0.0010, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:12:13.050 -08 000000037 INF: Tilt Motor 2: Moved to 5.2431 after 562.4584 ms
17-02-28 20:12:13.050 -08 000000090 INF: Tilt Motor 1: Moved to 5.1786 after 562.655 ms
17-02-28 20:12:13.050 -08 000000090 INF: ======================================
17-02-28 20:12:13.050 -08 000000037 INF: ======================================
17-02-28 20:12:13.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:12:13.052 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:12:13.053 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:12:13.053 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:12:13.059 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry===================
17-02-28 20:12:13.059 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8)===================
17-02-28 20:12:13.069 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:13.069 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:13.070 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:12:13.070 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:12:13.109 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:12:13.109 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:13.109 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:12:13.109 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:12:13.185 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:13.249 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:13.263 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 8, aspirate port PortB, aspiration rate 250, dispense rate 2000, volume 100, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=3, Children=0, Thread="Run", Parent="Pause flowcell", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:12:13.349 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:12:13.434 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:12:13.434 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:12:13.498 -08 000000098 INF: FPGA: Recv MIOCOMPR
17-02-28 20:12:13.498 -08 000000018 INF: Compensator: Moved OutOfPath in 389 ms
17-02-28 20:12:13.499 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:13.500 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:13.501 -08 000000010 INF: ===================Move Tilt Motor 1===================
17-02-28 20:12:13.501 -08 000000109 INF: ===================Move Tilt Motor 2===================
17-02-28 20:12:13.501 -08 000000010 INF: Tilt Motor 1: Moving to 5.2805 mm, started at 5.1786 mm, delta = 0.1019 mm
17-02-28 20:12:13.501 -08 000000010 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:13.501 -08 000000109 INF: Tilt Motor 2: Moving to 5.2092 mm, started at 5.2431 mm, delta = -0.0339 mm
17-02-28 20:12:13.501 -08 000000074 INF: ===================Move Tilt Motor 3===================
17-02-28 20:12:13.501 -08 000000074 INF: Tilt Motor 3: Moving to 5.2351 mm, started at 5.2710 mm, delta = -0.0359 mm
17-02-28 20:12:13.502 -08 000000074 INF: FPGA: Xmit T3RD\n
17-02-28 20:12:13.504 -08 000000109 INF: FPGA: Xmit T2RD\n
17-02-28 20:12:13.534 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:12:13.560 -08 000000076 INF: FPGA: Recv T1RD 20388
17-02-28 20:12:13.560 -08 000000076 INF: FPGA: Recv T3RD 20752
17-02-28 20:12:13.560 -08 000000076 INF: FPGA: Recv T2RD 20642
17-02-28 20:12:13.560 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3440 + 2/6
17-02-28 20:12:13.560 -08 000000109 INF: Tilt Motor 2: Moving to 20509 encoder counts
17-02-28 20:12:13.560 -08 000000074 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:12:13.560 -08 000000074 INF: Tilt Motor 3: Moving to 20611 encoder counts
17-02-28 20:12:13.560 -08 000000109 INF: FPGA: Xmit T2MOVETO 20509\n
17-02-28 20:12:13.561 -08 000000010 INF: Tilt Motor 1: Encoder: at motor step 3398 + 0/6
17-02-28 20:12:13.561 -08 000000010 INF: Tilt Motor 1: Moving to 20789 encoder counts
17-02-28 20:12:13.563 -08 000000074 INF: FPGA: Xmit T3MOVETO 20611\n
17-02-28 20:12:13.564 -08 000000010 INF: FPGA: Xmit T1MOVETO 20789\n
17-02-28 20:12:13.623 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:13.684 -08 000000106 INF: FPGA: Recv T2MOVETO 22
17-02-28 20:12:13.684 -08 000000106 INF: FPGA: Recv T3MOVETO 23
17-02-28 20:12:13.684 -08 000000109 INF: Tilt Motor 2: To move from 5.243 to 5.209 (-0.034 mm) should take 22 steps, but required 22 steps (0.034 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:12:13.684 -08 000000074 INF: Tilt Motor 3: To move from 5.271 to 5.235 (-0.036 mm) should take 24 steps, but required 23 steps (0.035 mm). Slippage = -0.002 mm (0.04%)
17-02-28 20:12:13.684 -08 000000109 INF: FPGA: Xmit T2RD\n
17-02-28 20:12:13.685 -08 000000074 INF: FPGA: Xmit T3RD\n
17-02-28 20:12:13.723 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:13.746 -08 000000051 INF: FPGA: Recv T2RD 20510
17-02-28 20:12:13.746 -08 000000051 INF: FPGA: Recv T3RD 20613
17-02-28 20:12:13.746 -08 000000051 INF: FPGA: Recv T1MOVETO 66
17-02-28 20:12:13.746 -08 000000010 INF: Tilt Motor 1: To move from 5.179 to 5.280 (0.102 mm) should take 67 steps, but required 66 steps (0.101 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:12:13.746 -08 000000010 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:13.747 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:13.747 -08 000000074 INF: Tilt Motor 3: Encoder: at motor step 3435 + 3/6
17-02-28 20:12:13.747 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3418 + 2/6
17-02-28 20:12:13.748 -08 000000074 INF: FPGA: Xmit T3RD\n
17-02-28 20:12:13.749 -08 000000109 INF: FPGA: Xmit T2RD\n
17-02-28 20:12:13.810 -08 000000046 INF: FPGA: Recv T1RD 20785
17-02-28 20:12:13.811 -08 000000046 INF: FPGA: Recv T3RD 20613
17-02-28 20:12:13.811 -08 000000046 INF: FPGA: Recv T2RD 20510
17-02-28 20:12:13.811 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3418 + 2/6
17-02-28 20:12:13.811 -08 000000010 INF: Tilt Motor 1: Encoder: at motor step 3464 + 1/6
17-02-28 20:12:13.811 -08 000000109 INF: FPGA: Xmit T2RD\n
17-02-28 20:12:13.811 -08 000000074 INF: Tilt Motor 3: Encoder: at motor step 3435 + 3/6
17-02-28 20:12:13.812 -08 000000010 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:13.814 -08 000000074 INF: FPGA: Xmit T3RD\n
17-02-28 20:12:13.870 -08 000000052 INF: FPGA: Recv T2RD 20510
17-02-28 20:12:13.870 -08 000000052 INF: FPGA: Recv T1RD 20785
17-02-28 20:12:13.870 -08 000000052 INF: FPGA: Recv T3RD 20613
17-02-28 20:12:13.870 -08 000000010 INF: Tilt Motor 1: Encoder: at motor step 3464 + 1/6
17-02-28 20:12:13.870 -08 000000074 INF: Tilt Motor 3: Encoder: at motor step 3435 + 3/6
17-02-28 20:12:13.870 -08 000000074 INF: Tilt Motor 3: After move to 5.2351, error = 0.0006, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:12:13.870 -08 000000074 INF: Tilt Motor 3: Moved to 5.2357 after 369.0045 ms
17-02-28 20:12:13.870 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3418 + 2/6
17-02-28 20:12:13.870 -08 000000010 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:13.870 -08 000000109 INF: Tilt Motor 2: After move to 5.2092, error = 0.0003, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:12:13.871 -08 000000109 INF: Tilt Motor 2: Moved to 5.2095 after 369.4701 ms
17-02-28 20:12:13.871 -08 000000074 INF: ======================================
17-02-28 20:12:13.871 -08 000000109 INF: ======================================
17-02-28 20:12:13.935 -08 000000095 INF: FPGA: Recv T1RD 20785
17-02-28 20:12:13.935 -08 000000010 INF: Tilt Motor 1: Encoder: at motor step 3464 + 1/6
17-02-28 20:12:13.935 -08 000000010 INF: Tilt Motor 1: After move to 5.2805, error = -0.0011, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:12:13.935 -08 000000010 INF: Tilt Motor 1: Moved to 5.2794 after 434.1269 ms
17-02-28 20:12:13.936 -08 000000010 INF: ======================================
17-02-28 20:12:13.937 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:13.937 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:13.938 -08 000000018 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.28045574574027, m2=5.20920266944303, m3=5.23511066944303
17-02-28 20:12:13.944 -08 000000018 INF: Transformed XStagePosition from 6.138931 mm to 6.13893127441406 mm.
17-02-28 20:12:13.953 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:12:13.953 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:12:13.953 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:12:13.953 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:12:13.954 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:12:13.957 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:12:13.957 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:12:13.957 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:12:13.997 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:13.997 -08 000000109 INF: FPGA: Recv ZSTEP 
17-02-28 20:12:13.998 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:12:13.998 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:12:13.998 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1014 mm
17-02-28 20:12:13.998 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:12:14.059 -08 000000089 INF: FPGA: Recv ZTRG 
17-02-28 20:12:14.059 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:12:14.060 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:14.121 -08 000000074 INF: FPGA: Recv ZYT 
17-02-28 20:12:14.121 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:12:14.121 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:12:14.160 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:12:14.185 -08 000000105 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:12:14.186 -08 000000105 INF: FPGA: Recv ZMV 
17-02-28 20:12:14.186 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:12:14.186 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 64.548 ms
17-02-28 20:12:14.186 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:12:14.245 -08 000000030 INF: FPGA: Recv ZDACR 60292
17-02-28 20:12:14.245 -08 000000018 INF: Z Motor: MoveAndTrigger took 247.2247 ms w/comms
17-02-28 20:12:14.245 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:12:14.245 -08 000000018 INF: Z Motor: MoveAbsStepped took 247.4441 ms
17-02-28 20:12:14.246 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:14.246 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:12:14.246 -08 000000018 INF: Transformed XStagePosition from 6.138931 mm to 6.13893127441406 mm.
17-02-28 20:12:14.255 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:12:14.255 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:12:14.255 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:12:14.255 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:12:14.255 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:12:14.307 -08 000000110 INF: FPGA: Recv ZSTEP 
17-02-28 20:12:14.317 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:12:14.318 -08 000000018 INF: Transformed XStagePosition from 6.138931 mm to 6.13893127441406 mm.
17-02-28 20:12:14.326 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:12:14.326 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:12:14.326 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:12:14.329 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:14.329 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:12:14.329 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:14.329 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = A_1
17-02-28 20:12:14.329 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:14.330 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:14.331 -08 000000074 INF: ===================Move X,Y===================
17-02-28 20:12:14.331 -08 000000010 INF: ===================MoveEmissionFilters===================
17-02-28 20:12:14.332 -08 000000074 INF: ===================Move X,Y, Parallel===================
17-02-28 20:12:14.332 -08 000000104 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:12:14.332 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:12:14.332 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:12:14.332 -08 000000044 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:12:14.332 -08 000000109 INF: ===================Move X Motor without settling===================
17-02-28 20:12:14.332 -08 000000090 INF: ===================Move Y Motor without settling===================
17-02-28 20:12:14.332 -08 000000104 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:12:14.333 -08 000000109 INF: X Motor: Xmit PR VM\n
17-02-28 20:12:14.333 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:12:14.333 -08 000000090 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.9279 mm
17-02-28 20:12:14.333 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:12:14.333 -08 000000044 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:12:14.333 -08 000000090 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:12:14.333 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:14.334 -08 000000039 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:12:14.334 -08 000000064 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:12:14.334 -08 000000045 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:12:14.334 -08 000000089 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:12:14.334 -08 000000037 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:12:14.334 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:12:14.334 -08 000000064 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:12:14.334 -08 000000039 INF: ======================================
17-02-28 20:12:14.334 -08 000000037 INF: ======================================
17-02-28 20:12:14.334 -08 000000076 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:12:14.334 -08 000000083 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:12:14.335 -08 000000089 INF: ======================================
17-02-28 20:12:14.335 -08 000000076 INF: ======================================
17-02-28 20:12:14.335 -08 000000045 INF: ======================================
17-02-28 20:12:14.335 -08 000000064 INF: ======================================
17-02-28 20:12:14.336 -08 000000083 INF: ======================================
17-02-28 20:12:14.336 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:12:14.336 -08 000000044 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:12:14.337 -08 000000104 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:12:14.337 -08 000000087 INF: ======================================
17-02-28 20:12:14.338 -08 000000100 INF: ======================================
17-02-28 20:12:14.338 -08 000000044 INF: ======================================
17-02-28 20:12:14.338 -08 000000104 INF: ======================================
17-02-28 20:12:14.338 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:12:14.340 -08 000000098 INF: ======================================
17-02-28 20:12:14.341 -08 000000010 INF: ======================================
17-02-28 20:12:14.346 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:14.371 -08 000000109 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:12:14.371 -08 000000109 INF: X Motor: Xmit PR VI\n
17-02-28 20:12:14.372 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:12:14.372 -08 000000090 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:12:14.372 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:14.435 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:14.435 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:12:14.436 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:12:14.436 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:14.438 -08 000000109 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:12:14.438 -08 000000109 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:12:14.438 -08 000000109 INF: X Motor: Moving to 6.1389 mm @15.000 mm/sec, started at 89.0806 mm
17-02-28 20:12:14.438 -08 000000109 INF: X Motor: Xmit MA -21652\n
17-02-28 20:12:14.497 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:12:14.497 -08 000000090 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:14.497 -08 000000090 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:12:14.497 -08 000000090 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:12:14.499 -08 000000109 INF: X Motor: Recv MA -21652\r\n>
17-02-28 20:12:14.499 -08 000000109 INF: X Motor: WaitUntilStopped 65529
17-02-28 20:12:14.535 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V800IP19200R\r
17-02-28 20:12:14.561 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:12:14.561 -08 000000090 INF: Y Motor: Start the move command
17-02-28 20:12:14.561 -08 000000090 INF: Y Motor: Xmit t 1\r
17-02-28 20:12:14.623 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:12:14.623 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:14.623 -08 000000090 INF: Y Motor: WaitUntilStopped 61982
17-02-28 20:12:14.623 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:14.723 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:14.747 -08 000000090 INF: Y Motor: Unshifted Position: 1074295
17-02-28 20:12:14.797 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:14.810 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:14.921 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:15.059 -08 000000090 INF: Y Motor: Unshifted Position: 1779441
17-02-28 20:12:15.060 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:15.109 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:15.119 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:15.235 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:15.369 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:15.373 -08 000000090 INF: Y Motor: Unshifted Position: 2557822
17-02-28 20:12:15.423 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:15.432 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:15.544 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:15.682 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:15.683 -08 000000090 INF: Y Motor: Unshifted Position: 3335256
17-02-28 20:12:15.733 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:15.746 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:15.859 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:15.995 -08 000000090 INF: Y Motor: Unshifted Position: 4116166
17-02-28 20:12:15.996 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:16.045 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:16.057 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:16.168 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:16.308 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:16.309 -08 000000090 INF: Y Motor: Unshifted Position: 4896093
17-02-28 20:12:16.359 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:16.370 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:16.481 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:16.620 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:16.620 -08 000000090 INF: Y Motor: Unshifted Position: 5684495
17-02-28 20:12:16.670 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:16.681 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:16.795 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:16.931 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:16.935 -08 000000090 INF: Y Motor: Unshifted Position: 5947065
17-02-28 20:12:16.935 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:12:16.935 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:16.994 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:16.995 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:12:16.995 -08 000000090 INF: Y Motor: Moved to 64.4707 after 2371 ms
17-02-28 20:12:16.995 -08 000000090 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:12:17.057 -08 000000090 INF: Y Motor: Recv v 4096\r
17-02-28 20:12:17.057 -08 000000090 INF: Y Motor: Status After move finished OK:
17-02-28 20:12:17.057 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:17.120 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:12:17.120 -08 000000090 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:17.120 -08 000000090 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:12:17.182 -08 000000090 INF: Y Motor: Recv v 402653184\r
17-02-28 20:12:17.182 -08 000000090 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:12:17.182 -08 000000090 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:12:17.182 -08 000000090 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:12:17.244 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:17.245 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:12:17.245 -08 000000090 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:12:17.245 -08 000000090 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:12:17.245 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:17.304 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:17.305 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:12:17.305 -08 000000090 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:12:17.305 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:17.367 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:12:17.367 -08 000000090 INF: ======================================
17-02-28 20:12:17.554 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:17.617 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:17.867 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:17.930 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:18.180 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:18.241 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:18.491 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:18.552 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:18.802 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:18.865 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:19.115 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:19.178 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:19.428 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:19.490 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:19.757 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:19.803 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:20.053 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:20.114 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:20.364 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:20.425 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:20.551 -08 000000109 INF: X Motor: Xmit PR ER\n
17-02-28 20:12:20.613 -08 000000109 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:12:20.613 -08 000000109 INF: X Motor: Moved to 6.1387 after 6113 ms
17-02-28 20:12:20.613 -08 000000109 INF: ======================================
17-02-28 20:12:20.615 -08 000000074 INF: ===================Move X,Y===================
17-02-28 20:12:20.616 -08 000000074 INF: ======================================
17-02-28 20:12:20.617 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:20.618 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:20.618 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:12:20.618 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:12:20.675 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:12:20.675 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:12:20.675 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:20.735 -08 000000068 INF: FPGA: Recv ZFREQCL
17-02-28 20:12:20.735 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:12:20.735 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:20.736 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:20.736 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:12:20.797 -08 000000037 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:12:20.797 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:12:20.797 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:20.798 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:20.799 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:12:20.799 -08 000000038 INF: ===================Set YMotor gains for scans===================
17-02-28 20:12:20.799 -08 000000038 INF: ======================================
17-02-28 20:12:20.799 -08 000000010 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:12:20.800 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:12:20.801 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:12:20.802 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:12:20.802 -08 000000010 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:12:20.863 -08 000000069 INF: FPGA: Recv TDIYPOS
17-02-28 20:12:20.863 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:12:20.865 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:12:20.865 -08 000000010 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:12:20.924 -08 000000104 INF: FPGA: Recv TDIYARM2
17-02-28 20:12:20.924 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:12:20.925 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:12:20.927 -08 000000010 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:12:20.927 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:12:20.928 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:12:20.929 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:12:20.930 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:12:20.986 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:21.049 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:21.299 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:21.299 -08 000000010 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:12:21.299 -08 000000010 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:12:21.299 -08 000000010 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:12:21.314 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:12:21.316 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:12:21.362 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:21.612 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:21.674 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:21.699 -08 000000010 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:12:21.699 -08 000000010 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:12:21.699 -08 000000010 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:12:21.714 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:12:21.715 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:12:21.717 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:12:21.718 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:21.719 -08 000000010 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:12:21.719 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:21.721 -08 000000010 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:12:21.721 -08 000000010 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:12:21.721 -08 000000010 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:12:21.721 -08 000000010 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:12:21.737 -08 000000081 INF: FPGA: Recv ZYT 
17-02-28 20:12:21.738 -08 000000010 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:12:21.738 -08 000000010 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:12:21.796 -08 000000062 INF: FPGA: Recv ZARM
17-02-28 20:12:21.796 -08 000000010 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 58.1745 ms
17-02-28 20:12:21.796 -08 000000010 INF: Z Motor: ArmAbsStepped took 75.0448 ms
17-02-28 20:12:21.796 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:21.797 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:12:21.799 -08 000000010 INF: ======================================
17-02-28 20:12:21.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:21.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:21.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:21.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:21.802 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:21.803 -08 000000086 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:12:21.803 -08 000000104 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:12:21.803 -08 000000086 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:12:21.803 -08 000000086 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:12:21.803 -08 000000086 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:12:21.803 -08 000000104 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:12:21.803 -08 000000086 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:12:21.803 -08 000000104 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:12:21.803 -08 000000104 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:12:21.807 -08 000000104 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:12:21.924 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:21.985 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:22.171 -08 000000089 INF: FPGA: Recv EX2MV
17-02-28 20:12:22.171 -08 000000086 INF: Excitation Filter 2: Moved -107 steps in 367.9339 ms
17-02-28 20:12:22.171 -08 000000086 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.035 ms
17-02-28 20:12:22.171 -08 000000086 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.1046 ms
17-02-28 20:12:22.171 -08 000000086 INF: ======================================
17-02-28 20:12:22.232 -08 000000044 INF: FPGA: Recv EX1MV
17-02-28 20:12:22.232 -08 000000104 INF: Excitation Filter 1: Moved -107 steps in 428.7559 ms
17-02-28 20:12:22.232 -08 000000104 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 428.873 ms
17-02-28 20:12:22.232 -08 000000104 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 428.9392 ms
17-02-28 20:12:22.232 -08 000000104 INF: ======================================
17-02-28 20:12:22.233 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:22.235 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:22.235 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:22.235 -08 000000058 INF: ===================Serial===================
17-02-28 20:12:22.235 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:12:22.236 -08 000000076 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:22.236 -08 000000090 INF: ===================Move Y Motor without settling===================
17-02-28 20:12:22.236 -08 000000090 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4707 mm
17-02-28 20:12:22.236 -08 000000090 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:12:22.236 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:22.236 -08 000000058 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:12:22.236 -08 000000032 INF: ===================Camera TDI, Parallel===================
17-02-28 20:12:22.236 -08 000000058 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:12:22.237 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:12:22.237 -08 000000076 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:12:22.237 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:12:22.238 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:22.238 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:22.239 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:22.239 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:22.244 -08 000000076 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:12:22.298 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:22.299 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:12:22.299 -08 000000090 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:12:22.299 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:22.361 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:12:22.361 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:22.388 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:22.388 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:22.389 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:22.389 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:22.422 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:12:22.422 -08 000000090 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:22.422 -08 000000090 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:12:22.422 -08 000000090 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:12:22.484 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:12:22.484 -08 000000090 INF: Y Motor: Start the move command
17-02-28 20:12:22.484 -08 000000090 INF: Y Motor: Xmit t 1\r
17-02-28 20:12:22.538 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:22.538 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:22.539 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:22.539 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:22.548 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:12:22.548 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:22.548 -08 000000090 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:12:22.548 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:22.609 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:22.673 -08 000000090 INF: Y Motor: Unshifted Position: 5928735
17-02-28 20:12:22.688 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:22.688 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:22.689 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:22.689 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:22.723 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:22.838 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:12:22.838 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:12:22.838 -08 000000010 INF: ===================Camera #0 Frame #1===================
17-02-28 20:12:22.839 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:12:22.839 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:12:22.839 -08 000000089 INF: ===================Camera #2 Frame #1===================
17-02-28 20:12:22.847 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:22.859 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:22.920 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:22.983 -08 000000090 INF: Y Motor: Unshifted Position: 5882025
17-02-28 20:12:22.991 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:12:22.991 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:12:22.991 -08 000000010 INF: ===================Camera #0 Frame #3===================
17-02-28 20:12:22.992 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:12:22.992 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:12:22.992 -08 000000089 INF: ===================Camera #2 Frame #3===================
17-02-28 20:12:23.033 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:23.148 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:12:23.148 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:12:23.148 -08 000000010 INF: ===================Camera #0 Frame #4===================
17-02-28 20:12:23.149 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:12:23.149 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:12:23.149 -08 000000089 INF: ===================Camera #2 Frame #4===================
17-02-28 20:12:23.161 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:23.170 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:23.235 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:23.297 -08 000000090 INF: Y Motor: Unshifted Position: 5834780
17-02-28 20:12:23.301 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:12:23.301 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:12:23.301 -08 000000010 INF: ===================Camera #0 Frame #5===================
17-02-28 20:12:23.302 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:12:23.302 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:12:23.302 -08 000000089 INF: ===================Camera #2 Frame #5===================
17-02-28 20:12:23.347 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:23.359 -08 000000110 INF: FPGA: Recv ZWAIT 
17-02-28 20:12:23.359 -08 000000110 INF: FPGA: Recv TDIYWAIT
17-02-28 20:12:23.360 -08 000000058 INF: ===================Serial===================
17-02-28 20:12:23.360 -08 000000076 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:23.362 -08 000000058 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:12:23.362 -08 000000076 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:12:23.362 -08 000000058 INF: ===================Serial===================
17-02-28 20:12:23.363 -08 000000105 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:12:23.363 -08 000000083 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:12:23.363 -08 000000105 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:12:23.363 -08 000000105 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:12:23.363 -08 000000105 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:12:23.363 -08 000000105 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:12:23.363 -08 000000083 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:12:23.363 -08 000000083 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:12:23.363 -08 000000083 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:12:23.363 -08 000000058 INF: ======================================
17-02-28 20:12:23.364 -08 000000083 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:12:23.454 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:12:23.454 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:12:23.454 -08 000000010 INF: ===================Camera #0 Frame #6===================
17-02-28 20:12:23.455 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:12:23.455 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:12:23.455 -08 000000089 INF: ===================Camera #2 Frame #6===================
17-02-28 20:12:23.457 -08 000000010 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:12:23.458 -08 000000010 INF: ===================CameraTDI Cleanup===================
17-02-28 20:12:23.458 -08 000000089 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:12:23.459 -08 000000089 INF: ===================CameraTDI Cleanup===================
17-02-28 20:12:23.471 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:23.481 -08 000000010 INF: Camera #0 ReleaseBuffer
17-02-28 20:12:23.481 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:12:23.482 -08 000000010 INF: ======================================
17-02-28 20:12:23.485 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:23.506 -08 000000089 INF: Camera #2 ReleaseBuffer
17-02-28 20:12:23.506 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:12:23.507 -08 000000089 INF: ======================================
17-02-28 20:12:23.509 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:12:23.510 -08 000000032 INF: ======================================
17-02-28 20:12:23.546 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:23.611 -08 000000090 INF: Y Motor: Unshifted Position: 5790758
17-02-28 20:12:23.661 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:23.794 -08 000000030 INF: FPGA: Recv EX1MV
17-02-28 20:12:23.794 -08 000000030 INF: FPGA: Recv EX2MV
17-02-28 20:12:23.794 -08 000000083 INF: Excitation Filter 2: Moved 107 steps in 430.7275 ms
17-02-28 20:12:23.794 -08 000000083 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 430.8236 ms
17-02-28 20:12:23.794 -08 000000083 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 430.8943 ms
17-02-28 20:12:23.794 -08 000000105 INF: Excitation Filter 1: Moved 107 steps in 431.0282 ms
17-02-28 20:12:23.794 -08 000000105 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 431.2369 ms
17-02-28 20:12:23.794 -08 000000105 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 431.3098 ms
17-02-28 20:12:23.794 -08 000000083 INF: ======================================
17-02-28 20:12:23.794 -08 000000105 INF: ======================================
17-02-28 20:12:23.796 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:23.796 -08 000000090 INF: Y Motor: Unshifted Position: 5790744
17-02-28 20:12:23.796 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:12:23.796 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:23.796 -08 000000076 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:23.797 -08 000000076 INF: ======================================
17-02-28 20:12:23.858 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:23.859 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:12:23.859 -08 000000090 INF: Y Motor: Moved to 62.9074 after 1311 ms
17-02-28 20:12:23.859 -08 000000090 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:12:23.921 -08 000000090 INF: Y Motor: Recv v 4097\r
17-02-28 20:12:23.921 -08 000000090 INF: Y Motor: Status After move finished OK:
17-02-28 20:12:23.921 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:23.982 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:12:23.982 -08 000000090 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:23.982 -08 000000090 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:12:24.044 -08 000000090 INF: Y Motor: Recv v 134217728\r
17-02-28 20:12:24.044 -08 000000090 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:12:24.044 -08 000000090 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:12:24.044 -08 000000090 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:12:24.106 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:12:24.106 -08 000000090 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:12:24.106 -08 000000090 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:12:24.106 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:24.108 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:24.169 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:24.170 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:12:24.170 -08 000000090 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:12:24.170 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:24.232 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:12:24.232 -08 000000090 INF: ======================================
17-02-28 20:12:24.233 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:24.234 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:24.235 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:24.235 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:12:24.293 -08 000000051 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:12:24.293 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:12:24.355 -08 000000109 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:12:24.355 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:12:24.418 -08 000000054 INF: FPGA: Recv ZADCR 2428
17-02-28 20:12:24.418 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:12:24.418 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:12:24.419 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:24.480 -08 000000086 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:12:24.480 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:12:24.480 -08 000000018 INF: TDIScan finished after 10161.6885 ms
17-02-28 20:12:24.480 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:12:24.480 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:12:24.480 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:12:24.481 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:24.543 -08 000000074 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:12:24.543 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:24.544 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:24.545 -08 000000085 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:12:24.545 -08 000000037 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:12:24.545 -08 000000087 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:12:24.545 -08 000000085 INF: ======================================
17-02-28 20:12:24.545 -08 000000087 INF: ======================================
17-02-28 20:12:24.545 -08 000000037 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:12:24.545 -08 000000037 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:12:24.606 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:12:24.606 -08 000000037 INF: ======================================
17-02-28 20:12:24.607 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:24.608 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:24.609 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:12:24.641 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:24.641 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:12:24.670 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:24.670 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:12:24.700 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:24.700 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:12:24.726 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:24.726 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:12:24.727 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:12:24.728 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:12:24.731 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:24.735 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:12:24.736 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-02-28 20:12:24.736 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:12:24.793 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:25.043 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:25.104 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:25.354 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:25.360 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-02-28 20:12:25.384 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0464092879413927Best Z position at top surface = -0.120027123627975Best Z position at top surface + compensator offset = -0.0973271236279754 C:3,L:1,T
17-02-28 20:12:25.385 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.120027123627975
17-02-28 20:12:25.385 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.72146
17-02-28 20:12:25.385 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0464092879413927
17-02-28 20:12:25.385 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.3668
17-02-28 20:12:25.385 -08 000000018 INF: Z-height at LaneTopSurface is -0.120027123627975.
17-02-28 20:12:25.385 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:12:25.416 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:25.520 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:12:25.520 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:12:25.539 -08 000000052 INF: FPGA: Recv ZSTEP 
17-02-28 20:12:25.539 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:12:25.541 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:25.541 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:25.542 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:25.542 -08 000000083 INF: ===================Move Tilt Motor 1===================
17-02-28 20:12:25.543 -08 000000104 INF: ===================Move Tilt Motor 2===================
17-02-28 20:12:25.543 -08 000000083 INF: Tilt Motor 1: Moving to 5.2805 mm, started at 5.2794 mm, delta = 0.0011 mm
17-02-28 20:12:25.543 -08 000000083 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:25.543 -08 000000032 INF: ===================Move Tilt Motor 3===================
17-02-28 20:12:25.543 -08 000000104 INF: ======================================
17-02-28 20:12:25.543 -08 000000032 INF: ======================================
17-02-28 20:12:25.604 -08 000000101 INF: FPGA: Recv T1RD 20785
17-02-28 20:12:25.604 -08 000000083 INF: Tilt Motor 1: Encoder: at motor step 3464 + 1/6
17-02-28 20:12:25.604 -08 000000083 INF: Tilt Motor 1: Moving to 20789 encoder counts
17-02-28 20:12:25.604 -08 000000083 INF: FPGA: Xmit T1MOVETO 20789\n
17-02-28 20:12:25.666 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:25.728 -08 000000110 INF: FPGA: Recv T1MOVETO 0
17-02-28 20:12:25.728 -08 000000083 INF: Tilt Motor 1: To move from 5.279 to 5.280 (0.001 mm) should take 1 steps, but required 0 steps (0.000 mm). Slippage = -0.002 mm (-1.43%)
17-02-28 20:12:25.728 -08 000000083 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:25.729 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:25.790 -08 000000098 INF: FPGA: Recv T1RD 20785
17-02-28 20:12:25.790 -08 000000083 INF: Tilt Motor 1: Encoder: at motor step 3464 + 1/6
17-02-28 20:12:25.790 -08 000000083 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:25.852 -08 000000074 INF: FPGA: Recv T1RD 20785
17-02-28 20:12:25.852 -08 000000083 INF: Tilt Motor 1: Encoder: at motor step 3464 + 1/6
17-02-28 20:12:25.852 -08 000000083 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:25.916 -08 000000064 INF: FPGA: Recv T1RD 20785
17-02-28 20:12:25.916 -08 000000083 INF: Tilt Motor 1: Encoder: at motor step 3464 + 1/6
17-02-28 20:12:25.916 -08 000000083 INF: Tilt Motor 1: After move to 5.2805, error = -0.0011, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:12:25.916 -08 000000083 INF: Tilt Motor 1: Moved to 5.2794 after 373.2836 ms
17-02-28 20:12:25.916 -08 000000083 INF: ======================================
17-02-28 20:12:25.917 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:25.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:25.918 -08 000000018 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.28045574574027, m2=5.20920266944303, m3=5.23511066944303
17-02-28 20:12:25.919 -08 000000018 INF: ETF Best Z: -0.09732712 mm (25513 DAC)
17-02-28 20:12:25.919 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:25.920 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:25.920 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:12:25.920 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:12:26.334 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:26.334 -08 000000038 INF: FPGA: Recv MIOCOMPF
17-02-28 20:12:26.334 -08 000000018 INF: Compensator: Moved IntoPath in 414 ms
17-02-28 20:12:26.335 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:26.336 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:26.338 -08 000000110 INF: RunCopyService queue size at 2/28/2017 8:12:26 PM is 2
17-02-28 20:12:26.342 -08 000000018 INF: Swath 1 position calculated to be: {X=5.584931, Y=39.70011} from estimated center X= 6.061996, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:12:26.342 -08 000000018 INF: Swath 2 position calculated to be: {X=6.692931, Y=39.70011} from estimated center X= 6.061996, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:12:26.348 -08 000000018 INF: Swath 0: Converted transform from (32.80916, -65.33437) pixels to (0.011385, -0.022425) mm.
17-02-28 20:12:26.354 -08 000000018 INF: Swath 1: Converted transform from (-10.56714, -64.5733) pixels to (-0.003795, -0.022425) mm.
17-02-28 20:12:26.354 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011===================
17-02-28 20:12:26.355 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011===================
17-02-28 20:12:26.355 -08 000000018 INF: Transformed XStagePosition from 5.584931 mm to 5.59631637390703 mm.
17-02-28 20:12:26.366 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4676913333833 mm.
17-02-28 20:12:26.366 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2676913333833 mm.
17-02-28 20:12:26.366 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3584413333833 mm.
17-02-28 20:12:26.369 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:26.369 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:12:26.369 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:26.369 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = A_1
17-02-28 20:12:26.374 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:26.375 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:26.376 -08 000000032 INF: ===================MoveEmissionFilters===================
17-02-28 20:12:26.376 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:12:26.376 -08 000000064 INF: ===================Move X,Y===================
17-02-28 20:12:26.377 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:12:26.377 -08 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:12:26.377 -08 000000106 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:12:26.377 -08 000000046 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:12:26.377 -08 000000046 INF: Z Motor: Moving to -0.1173 mm, started at -0.0100 mm
17-02-28 20:12:26.377 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:12:26.377 -08 000000064 INF: ===================Move X,Y, Parallel===================
17-02-28 20:12:26.377 -08 000000046 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:12:26.377 -08 000000083 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:12:26.378 -08 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:12:26.378 -08 000000106 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:12:26.378 -08 000000054 INF: ===================Move X Motor without settling===================
17-02-28 20:12:26.378 -08 000000062 INF: ===================Move Y Motor without settling===================
17-02-28 20:12:26.378 -08 000000083 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:12:26.378 -08 000000054 INF: X Motor: Xmit PR VM\n
17-02-28 20:12:26.378 -08 000000062 INF: Y Motor: Moving to 64.4677 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:12:26.378 -08 000000062 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:12:26.378 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:26.378 -08 000000068 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:12:26.378 -08 000000034 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:12:26.379 -08 000000089 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:12:26.379 -08 000000104 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:12:26.379 -08 000000104 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:12:26.379 -08 000000098 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:12:26.379 -08 000000100 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:12:26.379 -08 000000034 INF: ======================================
17-02-28 20:12:26.379 -08 000000104 INF: ======================================
17-02-28 20:12:26.379 -08 000000100 INF: ======================================
17-02-28 20:12:26.380 -08 000000098 INF: ======================================
17-02-28 20:12:26.380 -08 000000068 INF: ======================================
17-02-28 20:12:26.380 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:12:26.381 -08 000000083 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:12:26.381 -08 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:12:26.381 -08 000000100 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:12:26.381 -08 000000098 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:12:26.382 -08 000000100 INF: ======================================
17-02-28 20:12:26.382 -08 000000083 INF: ======================================
17-02-28 20:12:26.382 -08 000000089 INF: ======================================
17-02-28 20:12:26.382 -08 000000086 INF: ======================================
17-02-28 20:12:26.383 -08 000000098 INF: ======================================
17-02-28 20:12:26.383 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:12:26.383 -08 000000106 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:12:26.384 -08 000000069 INF: FPGA: Recv ZTRG 
17-02-28 20:12:26.384 -08 000000046 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:12:26.384 -08 000000085 INF: ======================================
17-02-28 20:12:26.385 -08 000000106 INF: ======================================
17-02-28 20:12:26.386 -08 000000032 INF: ======================================
17-02-28 20:12:26.401 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:26.447 -08 000000076 INF: FPGA: Recv ZYT 
17-02-28 20:12:26.447 -08 000000046 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:12:26.447 -08 000000046 INF: FPGA: Xmit ZMV 30756\n
17-02-28 20:12:26.448 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:12:26.448 -08 000000062 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:12:26.448 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:26.450 -08 000000054 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:12:26.450 -08 000000054 INF: X Motor: Xmit PR VI\n
17-02-28 20:12:26.508 -08 000000052 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:12:26.508 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:12:26.510 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:12:26.510 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:26.510 -08 000000054 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:12:26.510 -08 000000054 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:12:26.510 -08 000000054 INF: X Motor: Moving to 5.5963 mm @15.000 mm/sec, started at 6.1387 mm
17-02-28 20:12:26.510 -08 000000054 INF: X Motor: Xmit MA -21874\n
17-02-28 20:12:26.570 -08 000000090 INF: FPGA: Recv ZMV 
17-02-28 20:12:26.570 -08 000000046 INF: Z Motor: MoveAndTrigger 'ZMV' command took 123.0545 ms
17-02-28 20:12:26.570 -08 000000046 INF: FPGA: Xmit ZDACR\n
17-02-28 20:12:26.572 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:12:26.572 -08 000000062 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:26.572 -08 000000054 INF: X Motor: Recv MA -21874\r\n>
17-02-28 20:12:26.572 -08 000000062 INF: Y Motor: Set target position to 5946769 encoder counts
17-02-28 20:12:26.572 -08 000000062 INF: Y Motor: Xmit s r0xca 5946769\r
17-02-28 20:12:26.572 -08 000000054 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:12:26.635 -08 000000076 INF: FPGA: Recv ZDACR 30756
17-02-28 20:12:26.635 -08 000000046 INF: Z Motor: MoveAndTrigger took 257.9321 ms w/comms
17-02-28 20:12:26.635 -08 000000046 INF: Z Motor: After move to -0.1173, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:12:26.635 -08 000000046 INF: Z Motor: MoveAbsStepped took 258.0781 ms
17-02-28 20:12:26.635 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:12:26.637 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:12:26.637 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:12:26.637 -08 000000062 INF: Y Motor: Start the move command
17-02-28 20:12:26.637 -08 000000062 INF: Y Motor: Xmit t 1\r
17-02-28 20:12:26.638 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:12:26.638 -08 000000105 INF: ===================Camera Arm TDI===================
17-02-28 20:12:26.638 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:26.638 -08 000000105 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:12:26.639 -08 000000085 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:12:26.639 -08 000000105 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:12:26.639 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:12:26.640 -08 000000085 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:12:26.651 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:26.698 -08 000000044 INF: FPGA: Recv ZSEL 
17-02-28 20:12:26.699 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:12:26.699 -08 000000085 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:12:26.700 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:12:26.700 -08 000000062 INF: Y Motor: WaitUntilStopped 60062
17-02-28 20:12:26.700 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:26.713 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:26.758 -08 000000110 INF: FPGA: Recv TDIBB
17-02-28 20:12:26.758 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:12:26.759 -08 000000085 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:12:26.760 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:26.761 -08 000000085 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:12:26.761 -08 000000085 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:12:26.761 -08 000000085 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:12:26.820 -08 000000102 INF: FPGA: Recv ZSTEP 
17-02-28 20:12:26.820 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:26.822 -08 000000062 INF: Y Motor: Unshifted Position: 5870962
17-02-28 20:12:26.822 -08 000000085 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:12:26.822 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:26.824 -08 000000085 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:12:26.824 -08 000000085 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:12:26.824 -08 000000085 INF: Z Motor: Arming to move to -0.0773 mm
17-02-28 20:12:26.824 -08 000000085 INF: FPGA: Xmit ZYT 6426769 4\n
17-02-28 20:12:26.872 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:26.883 -08 000000032 INF: FPGA: Recv ZYT 
17-02-28 20:12:26.883 -08 000000085 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6370962 enc / 63.710 mm / ) = 6426769 enc / 64.268 mm
17-02-28 20:12:26.883 -08 000000085 INF: FPGA: Xmit ZARM 20271\n
17-02-28 20:12:26.947 -08 000000069 INF: FPGA: Recv ZARM
17-02-28 20:12:26.947 -08 000000085 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.7347 ms
17-02-28 20:12:26.948 -08 000000085 INF: Z Motor: ArmAbsStepped took 123.5871 ms
17-02-28 20:12:26.948 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:26.949 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:12:26.951 -08 000000085 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:12:26.951 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:12:26.953 -08 000000085 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:12:26.953 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:12:26.954 -08 000000085 INF: ======================================
17-02-28 20:12:26.963 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:26.999 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:27.011 -08 000000054 INF: X Motor: Xmit PR ER\n
17-02-28 20:12:27.026 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:27.073 -08 000000054 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:12:27.073 -08 000000054 INF: X Motor: Moved to 5.5967 after 500 ms
17-02-28 20:12:27.073 -08 000000054 INF: ======================================
17-02-28 20:12:27.135 -08 000000062 INF: Y Motor: Unshifted Position: 5946770
17-02-28 20:12:27.135 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:12:27.135 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:27.196 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:12:27.196 -08 000000062 INF: Y Motor: Moved to 64.4677 after 496 ms
17-02-28 20:12:27.196 -08 000000062 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:12:27.258 -08 000000062 INF: Y Motor: Recv v 4096\r
17-02-28 20:12:27.258 -08 000000062 INF: Y Motor: Status After move finished OK:
17-02-28 20:12:27.258 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:27.276 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:27.323 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:12:27.323 -08 000000062 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:27.323 -08 000000062 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:12:27.338 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:27.385 -08 000000062 INF: Y Motor: Recv v 402653184\r
17-02-28 20:12:27.385 -08 000000062 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:12:27.385 -08 000000062 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:12:27.385 -08 000000062 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:12:27.445 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:12:27.445 -08 000000062 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:12:27.445 -08 000000062 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:12:27.445 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:27.509 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:12:27.509 -08 000000062 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:12:27.509 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:27.571 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:12:27.571 -08 000000062 INF: ======================================
17-02-28 20:12:27.572 -08 000000064 INF: ===================Move X,Y===================
17-02-28 20:12:27.573 -08 000000064 INF: ======================================
17-02-28 20:12:27.588 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:27.610 -08 000000105 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:12:27.610 -08 000000105 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:12:27.610 -08 000000105 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:12:27.625 -08 000000105 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:12:27.627 -08 000000105 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:12:27.650 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:27.900 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:27.961 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:28.211 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:28.274 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:28.524 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:28.584 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:28.637 -08 000000105 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:12:28.637 -08 000000105 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:12:28.637 -08 000000105 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:12:28.652 -08 000000105 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:12:28.654 -08 000000105 INF: ===================Camera Arm TDI===================
17-02-28 20:12:28.655 -08 000000105 INF: ======================================
17-02-28 20:12:28.656 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:12:28.657 -08 000000046 INF: ======================================
17-02-28 20:12:28.658 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:28.659 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:28.659 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:12:28.659 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:12:28.757 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:12:28.757 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:12:28.817 -08 000000104 INF: FPGA: Recv ZFREQCL
17-02-28 20:12:28.817 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:12:28.817 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:28.818 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:12:28.834 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:28.881 -08 000000046 INF: FPGA: Recv TDIYERD 6446771
17-02-28 20:12:28.881 -08 000000018 INF: Before scan, Y encoder from FPGA = 6446771 counts (64.468 mm)
17-02-28 20:12:28.881 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:28.882 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:28.882 -08 000000101 INF: ===================TDI FPGA Arm===================
17-02-28 20:12:28.882 -08 000000081 INF: ===================Set YMotor gains for scans===================
17-02-28 20:12:28.883 -08 000000081 INF: ======================================
17-02-28 20:12:28.883 -08 000000101 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:12:28.884 -08 000000101 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:12:28.884 -08 000000101 INF: FPGA: Xmit TDIYPOS 6335844\n
17-02-28 20:12:28.898 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:28.943 -08 000000104 INF: FPGA: Recv TDIYPOS
17-02-28 20:12:28.943 -08 000000101 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:12:28.945 -08 000000101 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:12:28.945 -08 000000101 INF: FPGA: Xmit TDIYARM3 139264 6426769 1 1\n
17-02-28 20:12:29.005 -08 000000046 INF: FPGA: Recv TDIYARM3
17-02-28 20:12:29.005 -08 000000101 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:12:29.006 -08 000000101 INF: ===================TDI FPGA Arm===================
17-02-28 20:12:29.007 -08 000000101 INF: ======================================
17-02-28 20:12:29.008 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:29.009 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:29.009 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:29.010 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:29.010 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:29.011 -08 000000086 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:12:29.011 -08 000000068 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:12:29.011 -08 000000086 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:12:29.011 -08 000000086 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:12:29.011 -08 000000086 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:12:29.011 -08 000000068 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:12:29.011 -08 000000086 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:12:29.011 -08 000000068 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:12:29.011 -08 000000068 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:12:29.012 -08 000000068 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:12:29.148 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:29.208 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:29.379 -08 000000034 INF: FPGA: Recv EX2MV
17-02-28 20:12:29.379 -08 000000034 INF: FPGA: Recv EX1MV
17-02-28 20:12:29.379 -08 000000068 INF: Excitation Filter 1: Moved -107 steps in 367.5172 ms
17-02-28 20:12:29.379 -08 000000068 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.6477 ms
17-02-28 20:12:29.379 -08 000000068 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.7294 ms
17-02-28 20:12:29.379 -08 000000086 INF: Excitation Filter 2: Moved -107 steps in 367.7141 ms
17-02-28 20:12:29.379 -08 000000086 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.9206 ms
17-02-28 20:12:29.379 -08 000000086 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.9863 ms
17-02-28 20:12:29.379 -08 000000068 INF: ======================================
17-02-28 20:12:29.379 -08 000000086 INF: ======================================
17-02-28 20:12:29.380 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:29.381 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:29.382 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:12:29.382 -08 000000090 INF: ===================FPGA Z Wait===================
17-02-28 20:12:29.382 -08 000000083 INF: ===================Move Y Motor without settling===================
17-02-28 20:12:29.382 -08 000000090 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:12:29.383 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:29.383 -08 000000083 INF: Y Motor: Moving to 14.8194 mm @6.500 mm/sec, started at 64.4677 mm
17-02-28 20:12:29.383 -08 000000083 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:12:29.383 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:29.383 -08 000000062 INF: ===================Camera TDI, Parallel===================
17-02-28 20:12:29.383 -08 000000045 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:12:29.384 -08 000000045 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:12:29.384 -08 000000110 INF: ===================Camera TDI===================
17-02-28 20:12:29.384 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:12:29.385 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:29.385 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:29.388 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:29.388 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:29.443 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:12:29.443 -08 000000083 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:12:29.443 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:29.458 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:29.506 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:12:29.506 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:29.521 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:29.535 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:29.535 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:29.538 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:29.538 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:29.567 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:12:29.567 -08 000000083 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:29.567 -08 000000083 INF: Y Motor: Set target position to 981935 encoder counts
17-02-28 20:12:29.567 -08 000000083 INF: Y Motor: Xmit s r0xca 981935\r
17-02-28 20:12:29.630 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:12:29.630 -08 000000083 INF: Y Motor: Start the move command
17-02-28 20:12:29.630 -08 000000083 INF: Y Motor: Xmit t 1\r
17-02-28 20:12:29.685 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:29.685 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:29.688 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:29.688 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:29.694 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:12:29.694 -08 000000083 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:12:29.694 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:29.754 -08 000000105 INF: FPGA: Recv ZWAIT 
17-02-28 20:12:29.754 -08 000000090 INF: ======================================
17-02-28 20:12:29.771 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:29.819 -08 000000083 INF: Y Motor: Unshifted Position: 5883610
17-02-28 20:12:29.831 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:29.835 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:12:29.835 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:12:29.835 -08 000000110 INF: ===================Camera #0 Frame #5===================
17-02-28 20:12:29.838 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:12:29.838 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:12:29.838 -08 000000085 INF: ===================Camera #2 Frame #5===================
17-02-28 20:12:29.869 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:29.993 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:30.000 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:12:30.000 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:12:30.000 -08 000000110 INF: ===================Camera #0 Frame #11===================
17-02-28 20:12:30.004 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:12:30.004 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:12:30.004 -08 000000085 INF: ===================Camera #2 Frame #11===================
17-02-28 20:12:30.081 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:30.130 -08 000000083 INF: Y Motor: Unshifted Position: 5680813
17-02-28 20:12:30.144 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:30.168 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:12:30.168 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:12:30.168 -08 000000110 INF: ===================Camera #0 Frame #17===================
17-02-28 20:12:30.173 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:12:30.173 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:12:30.173 -08 000000085 INF: ===================Camera #2 Frame #17===================
17-02-28 20:12:30.180 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:30.303 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:30.336 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:12:30.336 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:12:30.336 -08 000000110 INF: ===================Camera #0 Frame #23===================
17-02-28 20:12:30.342 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:12:30.342 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:12:30.342 -08 000000085 INF: ===================Camera #2 Frame #23===================
17-02-28 20:12:30.394 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:30.443 -08 000000083 INF: Y Motor: Unshifted Position: 5478457
17-02-28 20:12:30.457 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:30.493 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:30.504 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:12:30.504 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:12:30.504 -08 000000110 INF: ===================Camera #0 Frame #29===================
17-02-28 20:12:30.511 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:12:30.511 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:12:30.511 -08 000000085 INF: ===================Camera #2 Frame #29===================
17-02-28 20:12:30.617 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:30.672 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:12:30.672 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:12:30.672 -08 000000110 INF: ===================Camera #0 Frame #35===================
17-02-28 20:12:30.680 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:12:30.680 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:12:30.680 -08 000000085 INF: ===================Camera #2 Frame #36===================
17-02-28 20:12:30.707 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:30.753 -08 000000083 INF: Y Motor: Unshifted Position: 5275001
17-02-28 20:12:30.767 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:30.803 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:30.840 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:12:30.840 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:12:30.840 -08 000000110 INF: ===================Camera #0 Frame #42===================
17-02-28 20:12:30.853 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:12:30.853 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:12:30.853 -08 000000085 INF: ===================Camera #2 Frame #42===================
17-02-28 20:12:30.929 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:31.012 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:12:31.012 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:12:31.012 -08 000000110 INF: ===================Camera #0 Frame #48===================
17-02-28 20:12:31.017 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:31.023 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:12:31.023 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:12:31.023 -08 000000085 INF: ===================Camera #2 Frame #48===================
17-02-28 20:12:31.066 -08 000000083 INF: Y Motor: Unshifted Position: 5073288
17-02-28 20:12:31.080 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:31.116 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:31.181 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:12:31.181 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:12:31.181 -08 000000110 INF: ===================Camera #0 Frame #54===================
17-02-28 20:12:31.193 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:12:31.193 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:12:31.193 -08 000000085 INF: ===================Camera #2 Frame #55===================
17-02-28 20:12:31.239 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:31.330 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:31.350 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:12:31.350 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:12:31.351 -08 000000110 INF: ===================Camera #0 Frame #60===================
17-02-28 20:12:31.366 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:12:31.366 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:12:31.366 -08 000000085 INF: ===================Camera #2 Frame #61===================
17-02-28 20:12:31.377 -08 000000083 INF: Y Motor: Unshifted Position: 4869186
17-02-28 20:12:31.391 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:31.427 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:31.520 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:12:31.520 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:12:31.520 -08 000000110 INF: ===================Camera #0 Frame #67===================
17-02-28 20:12:31.536 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:12:31.536 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:12:31.536 -08 000000085 INF: ===================Camera #2 Frame #67===================
17-02-28 20:12:31.553 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:31.641 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:31.690 -08 000000083 INF: Y Motor: Unshifted Position: 4666820
17-02-28 20:12:31.693 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:12:31.693 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:12:31.693 -08 000000110 INF: ===================Camera #0 Frame #73===================
17-02-28 20:12:31.704 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:31.706 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:12:31.706 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:12:31.706 -08 000000085 INF: ===================Camera #2 Frame #73===================
17-02-28 20:12:31.740 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:31.862 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:12:31.862 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:12:31.862 -08 000000110 INF: ===================Camera #0 Frame #79===================
17-02-28 20:12:31.866 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:31.876 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:12:31.876 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:12:31.876 -08 000000085 INF: ===================Camera #2 Frame #80===================
17-02-28 20:12:31.954 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:32.001 -08 000000083 INF: Y Motor: Unshifted Position: 4463139
17-02-28 20:12:32.015 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:32.031 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:12:32.031 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:12:32.031 -08 000000110 INF: ===================Camera #0 Frame #85===================
17-02-28 20:12:32.050 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:12:32.050 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:12:32.050 -08 000000085 INF: ===================Camera #2 Frame #86===================
17-02-28 20:12:32.051 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:32.176 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:32.201 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:12:32.201 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:12:32.201 -08 000000110 INF: ===================Camera #0 Frame #92===================
17-02-28 20:12:32.220 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:12:32.220 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:12:32.220 -08 000000085 INF: ===================Camera #2 Frame #92===================
17-02-28 20:12:32.265 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:32.313 -08 000000083 INF: Y Motor: Unshifted Position: 4260347
17-02-28 20:12:32.327 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:32.363 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:32.374 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:12:32.374 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:12:32.374 -08 000000110 INF: ===================Camera #0 Frame #98===================
17-02-28 20:12:32.390 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:12:32.390 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:12:32.390 -08 000000085 INF: ===================Camera #2 Frame #99===================
17-02-28 20:12:32.489 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:32.543 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:12:32.543 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:12:32.543 -08 000000110 INF: ===================Camera #0 Frame #104===================
17-02-28 20:12:32.564 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:12:32.564 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:12:32.564 -08 000000085 INF: ===================Camera #2 Frame #105===================
17-02-28 20:12:32.577 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:32.624 -08 000000083 INF: Y Motor: Unshifted Position: 4058833
17-02-28 20:12:32.641 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:32.674 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:32.712 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:12:32.712 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:12:32.712 -08 000000110 INF: ===================Camera #0 Frame #110===================
17-02-28 20:12:32.735 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:12:32.735 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:12:32.735 -08 000000085 INF: ===================Camera #2 Frame #111===================
17-02-28 20:12:32.801 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:32.882 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:12:32.882 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:12:32.882 -08 000000110 INF: ===================Camera #0 Frame #117===================
17-02-28 20:12:32.891 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:32.906 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:12:32.906 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:12:32.906 -08 000000085 INF: ===================Camera #2 Frame #118===================
17-02-28 20:12:32.936 -08 000000083 INF: Y Motor: Unshifted Position: 3855169
17-02-28 20:12:32.953 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:32.986 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:33.055 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:12:33.055 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:12:33.055 -08 000000110 INF: ===================Camera #0 Frame #123===================
17-02-28 20:12:33.080 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:12:33.080 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:12:33.080 -08 000000085 INF: ===================Camera #2 Frame #124===================
17-02-28 20:12:33.111 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:33.203 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:33.224 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:12:33.224 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:12:33.224 -08 000000110 INF: ===================Camera #0 Frame #129===================
17-02-28 20:12:33.248 -08 000000083 INF: Y Motor: Unshifted Position: 3651070
17-02-28 20:12:33.251 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:12:33.251 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:12:33.251 -08 000000085 INF: ===================Camera #2 Frame #130===================
17-02-28 20:12:33.265 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:33.298 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:33.394 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:12:33.394 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:12:33.394 -08 000000110 INF: ===================Camera #0 Frame #136===================
17-02-28 20:12:33.422 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:12:33.422 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:12:33.422 -08 000000085 INF: ===================Camera #2 Frame #137===================
17-02-28 20:12:33.424 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:33.515 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:33.562 -08 000000083 INF: Y Motor: Unshifted Position: 3449996
17-02-28 20:12:33.567 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:12:33.567 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:12:33.567 -08 000000110 INF: ===================Camera #0 Frame #142===================
17-02-28 20:12:33.576 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:33.596 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:12:33.596 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:12:33.596 -08 000000085 INF: ===================Camera #2 Frame #143===================
17-02-28 20:12:33.612 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:33.735 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:33.737 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:12:33.737 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:12:33.737 -08 000000110 INF: ===================Camera #0 Frame #148===================
17-02-28 20:12:33.767 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:12:33.767 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:12:33.767 -08 000000085 INF: ===================Camera #2 Frame #149===================
17-02-28 20:12:33.826 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:33.872 -08 000000083 INF: Y Motor: Unshifted Position: 3245684
17-02-28 20:12:33.889 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:33.907 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:12:33.907 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:12:33.907 -08 000000110 INF: ===================Camera #0 Frame #154===================
17-02-28 20:12:33.922 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:33.938 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:12:33.938 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:12:33.938 -08 000000085 INF: ===================Camera #2 Frame #156===================
17-02-28 20:12:34.048 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:34.077 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:12:34.077 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:12:34.077 -08 000000110 INF: ===================Camera #0 Frame #161===================
17-02-28 20:12:34.112 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:12:34.112 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:12:34.112 -08 000000085 INF: ===================Camera #2 Frame #162===================
17-02-28 20:12:34.139 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:34.186 -08 000000083 INF: Y Motor: Unshifted Position: 3044195
17-02-28 20:12:34.200 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:34.236 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:34.250 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:12:34.250 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:12:34.250 -08 000000110 INF: ===================Camera #0 Frame #167===================
17-02-28 20:12:34.283 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:12:34.283 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:12:34.283 -08 000000085 INF: ===================Camera #2 Frame #168===================
17-02-28 20:12:34.363 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:34.420 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:12:34.420 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:12:34.420 -08 000000110 INF: ===================Camera #0 Frame #173===================
17-02-28 20:12:34.450 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:34.454 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:12:34.454 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:12:34.454 -08 000000085 INF: ===================Camera #2 Frame #175===================
17-02-28 20:12:34.498 -08 000000083 INF: Y Motor: Unshifted Position: 2841396
17-02-28 20:12:34.512 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:34.548 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:34.590 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:12:34.590 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:12:34.590 -08 000000110 INF: ===================Camera #0 Frame #180===================
17-02-28 20:12:34.628 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:12:34.628 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:12:34.628 -08 000000085 INF: ===================Camera #2 Frame #181===================
17-02-28 20:12:34.671 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:34.762 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:34.763 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:12:34.763 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:12:34.763 -08 000000110 INF: ===================Camera #0 Frame #186===================
17-02-28 20:12:34.799 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:12:34.799 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:12:34.799 -08 000000085 INF: ===================Camera #2 Frame #187===================
17-02-28 20:12:34.810 -08 000000083 INF: Y Motor: Unshifted Position: 2637724
17-02-28 20:12:34.825 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:34.860 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:34.933 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:12:34.933 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:12:34.933 -08 000000110 INF: ===================Camera #0 Frame #192===================
17-02-28 20:12:34.970 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:12:34.970 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:12:34.970 -08 000000085 INF: ===================Camera #2 Frame #194===================
17-02-28 20:12:34.985 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:35.075 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:35.102 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:12:35.102 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:12:35.102 -08 000000110 INF: ===================Camera #0 Frame #198===================
17-02-28 20:12:35.120 -08 000000083 INF: Y Motor: Unshifted Position: 2434720
17-02-28 20:12:35.137 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:35.144 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:12:35.144 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:12:35.144 -08 000000085 INF: ===================Camera #2 Frame #200===================
17-02-28 20:12:35.170 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:35.272 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:12:35.272 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:12:35.272 -08 000000110 INF: ===================Camera #0 Frame #205===================
17-02-28 20:12:35.295 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:35.315 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:12:35.315 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:12:35.315 -08 000000085 INF: ===================Camera #2 Frame #206===================
17-02-28 20:12:35.387 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:35.432 -08 000000083 INF: Y Motor: Unshifted Position: 2231916
17-02-28 20:12:35.445 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:12:35.445 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:12:35.445 -08 000000110 INF: ===================Camera #0 Frame #211===================
17-02-28 20:12:35.449 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:35.482 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:35.486 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:12:35.486 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:12:35.486 -08 000000085 INF: ===================Camera #2 Frame #213===================
17-02-28 20:12:35.608 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:35.615 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:12:35.615 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:12:35.615 -08 000000110 INF: ===================Camera #0 Frame #217===================
17-02-28 20:12:35.660 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:12:35.660 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:12:35.660 -08 000000085 INF: ===================Camera #2 Frame #219===================
17-02-28 20:12:35.699 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:35.746 -08 000000083 INF: Y Motor: Unshifted Position: 2029760
17-02-28 20:12:35.760 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:35.784 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:12:35.784 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:12:35.784 -08 000000110 INF: ===================Camera #0 Frame #224===================
17-02-28 20:12:35.796 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:35.829 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:12:35.829 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:12:35.829 -08 000000085 INF: ===================Camera #2 Frame #225===================
17-02-28 20:12:35.919 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:35.955 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:12:35.955 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:12:35.955 -08 000000110 INF: ===================Camera #0 Frame #230===================
17-02-28 20:12:35.998 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:12:35.998 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:12:35.998 -08 000000085 INF: ===================Camera #2 Frame #231===================
17-02-28 20:12:36.010 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:36.056 -08 000000083 INF: Y Motor: Unshifted Position: 1825445
17-02-28 20:12:36.073 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:36.106 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:36.125 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:12:36.125 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:12:36.125 -08 000000110 INF: ===================Camera #0 Frame #236===================
17-02-28 20:12:36.169 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:12:36.169 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:12:36.169 -08 000000085 INF: ===================Camera #2 Frame #238===================
17-02-28 20:12:36.233 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:36.295 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:12:36.295 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:12:36.295 -08 000000110 INF: ===================Camera #0 Frame #242===================
17-02-28 20:12:36.324 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:36.344 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:12:36.344 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:12:36.344 -08 000000085 INF: ===================Camera #2 Frame #244===================
17-02-28 20:12:36.371 -08 000000083 INF: Y Motor: Unshifted Position: 1623732
17-02-28 20:12:36.385 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:36.421 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:36.465 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:12:36.465 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:12:36.465 -08 000000110 INF: ===================Camera #0 Frame #249===================
17-02-28 20:12:36.515 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:12:36.515 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:12:36.515 -08 000000085 INF: ===================Camera #2 Frame #250===================
17-02-28 20:12:36.546 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:36.635 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:36.638 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:12:36.638 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:12:36.638 -08 000000110 INF: ===================Camera #0 Frame #255===================
17-02-28 20:12:36.682 -08 000000083 INF: Y Motor: Unshifted Position: 1420926
17-02-28 20:12:36.686 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:12:36.686 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:12:36.686 -08 000000085 INF: ===================Camera #2 Frame #257===================
17-02-28 20:12:36.696 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:36.732 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:36.808 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:12:36.808 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:12:36.808 -08 000000110 INF: ===================Camera #0 Frame #261===================
17-02-28 20:12:36.858 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:36.860 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:12:36.860 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:12:36.860 -08 000000085 INF: ===================Camera #2 Frame #263===================
17-02-28 20:12:36.946 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:36.978 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:12:36.978 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:12:36.978 -08 000000110 INF: ===================Camera #0 Frame #267===================
17-02-28 20:12:36.995 -08 000000083 INF: Y Motor: Unshifted Position: 1217904
17-02-28 20:12:37.009 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:37.031 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:12:37.031 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:12:37.031 -08 000000085 INF: ===================Camera #2 Frame #269===================
17-02-28 20:12:37.045 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:37.118 -08 000000037 INF: FPGA: Recv TDIYWAIT
17-02-28 20:12:37.118 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:37.120 -08 000000045 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:12:37.121 -08 000000102 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:12:37.121 -08 000000044 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:12:37.121 -08 000000102 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:12:37.121 -08 000000102 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:12:37.121 -08 000000102 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:12:37.121 -08 000000044 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:12:37.121 -08 000000102 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:12:37.121 -08 000000044 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:12:37.121 -08 000000044 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:12:37.122 -08 000000044 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:12:37.148 -08 000000110 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:12:37.148 -08 000000110 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:12:37.148 -08 000000110 INF: ===================Camera #0 Frame #272===================
17-02-28 20:12:37.164 -08 000000110 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:12:37.165 -08 000000110 INF: ===================CameraTDI Cleanup===================
17-02-28 20:12:37.170 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:37.259 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:37.305 -08 000000083 INF: Y Motor: Unshifted Position: 1014466
17-02-28 20:12:37.322 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:37.328 -08 000000110 INF: Camera #0 ReleaseBuffer
17-02-28 20:12:37.328 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:12:37.328 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:12:37.328 -08 000000085 INF: ===================Camera #2 Frame #272===================
17-02-28 20:12:37.328 -08 000000110 INF: ===================Camera TDI===================
17-02-28 20:12:37.338 -08 000000085 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:12:37.339 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:12:37.355 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:37.362 -08 000000110 INF: ======================================
17-02-28 20:12:37.492 -08 000000076 INF: FPGA: Recv EX2MV
17-02-28 20:12:37.492 -08 000000076 INF: FPGA: Recv EX1MV
17-02-28 20:12:37.492 -08 000000044 INF: Excitation Filter 1: Moved 107 steps in 370.8748 ms
17-02-28 20:12:37.492 -08 000000102 INF: Excitation Filter 2: Moved 107 steps in 371.0897 ms
17-02-28 20:12:37.492 -08 000000102 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.1881 ms
17-02-28 20:12:37.492 -08 000000102 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.263 ms
17-02-28 20:12:37.492 -08 000000044 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.0213 ms
17-02-28 20:12:37.492 -08 000000044 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.4086 ms
17-02-28 20:12:37.492 -08 000000102 INF: ======================================
17-02-28 20:12:37.493 -08 000000044 INF: ======================================
17-02-28 20:12:37.494 -08 000000083 INF: Y Motor: Unshifted Position: 981933
17-02-28 20:12:37.494 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:12:37.494 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:37.494 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:37.495 -08 000000045 INF: ======================================
17-02-28 20:12:37.538 -08 000000085 INF: Camera #2 ReleaseBuffer
17-02-28 20:12:37.538 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:12:37.556 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:12:37.556 -08 000000083 INF: Y Motor: Moved to 14.8193 after 7861 ms
17-02-28 20:12:37.556 -08 000000083 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:12:37.572 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:37.572 -08 000000085 INF: ======================================
17-02-28 20:12:37.573 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:12:37.574 -08 000000062 INF: ======================================
17-02-28 20:12:37.619 -08 000000083 INF: Y Motor: Recv v 4097\r
17-02-28 20:12:37.619 -08 000000083 INF: Y Motor: Status After move finished OK:
17-02-28 20:12:37.619 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:37.634 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:37.680 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:12:37.680 -08 000000083 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:37.680 -08 000000083 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:12:37.744 -08 000000083 INF: Y Motor: Recv v 134217728\r
17-02-28 20:12:37.744 -08 000000083 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:12:37.744 -08 000000083 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:12:37.744 -08 000000083 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:12:37.806 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:12:37.806 -08 000000083 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:12:37.806 -08 000000083 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:12:37.806 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:37.868 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:12:37.868 -08 000000083 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:12:37.868 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:37.884 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:37.931 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:12:37.931 -08 000000083 INF: ======================================
17-02-28 20:12:37.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:37.933 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:37.934 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:37.934 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:12:37.946 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:37.992 -08 000000086 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:12:37.992 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:12:38.055 -08 000000104 INF: FPGA: Recv TDIYERD 1481936
17-02-28 20:12:38.056 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:12:38.115 -08 000000110 INF: FPGA: Recv ZADCR 27456
17-02-28 20:12:38.115 -08 000000018 INF: At scan end Y pos = 14.819 and Z pos = -0.105. Y moved -48.539 mm
17-02-28 20:12:38.115 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:12:38.179 -08 000000089 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:12:38.179 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:12:38.180 -08 000000018 INF: TDIScan finished after 11824.3244 ms
17-02-28 20:12:38.180 -08 000000018 INF: Image[0]: Y should trigger at 63.358 mm, 2nd row was at 64.267 mm (error = 0.909 mm)
17-02-28 20:12:38.180 -08 000000018 INF: Image[2]: Y should trigger at 63.358 mm, 2nd row was at 64.267 mm (error = 0.909 mm)
17-02-28 20:12:38.182 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:38.196 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:38.214 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.065 um
17-02-28 20:12:38.214 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:38.215 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:12:38.240 -08 000000081 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:12:38.240 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:38.241 -08 000000068 INF: ===================Dither Clean Up Command===================
17-02-28 20:12:38.241 -08 000000044 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:12:38.241 -08 000000105 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:12:38.241 -08 000000087 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:12:38.242 -08 000000105 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:12:38.242 -08 000000105 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:12:38.242 -08 000000044 INF: ======================================
17-02-28 20:12:38.242 -08 000000087 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:12:38.242 -08 000000087 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:12:38.242 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:12:38.242 -08 000000062 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:12:38.243 -08 000000090 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:12:38.249 -08 000000062 INF: ===================LFT:Extracting coords===================
17-02-28 20:12:38.256 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:38.274 -08 000000062 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:12:38.275 -08 000000062 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:12:38.276 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:12:38.276 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:12:38.276 -08 000000086 INF: ===================LookupFocusTracking===================
17-02-28 20:12:38.276 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:12:38.302 -08 000000032 INF: FPGA: Recv ZSTEP 
17-02-28 20:12:38.302 -08 000000032 INF: FPGA: Recv ZSEL 
17-02-28 20:12:38.302 -08 000000090 INF: FPGA: Xmit ZDACW 30756\n
17-02-28 20:12:38.302 -08 000000087 INF: ======================================
17-02-28 20:12:38.306 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:12:38.306 -08 000000105 INF: ======================================
17-02-28 20:12:38.314 -08 000000109 INF: ===================Lookup Focus Tracking===================
17-02-28 20:12:38.314 -08 000000034 INF: ===================Lookup Focus Tracking===================
17-02-28 20:12:38.314 -08 000000086 INF: ===================Lookup Focus Tracking===================
17-02-28 20:12:38.314 -08 000000069 INF: ===================Lookup Focus Tracking===================
17-02-28 20:12:38.366 -08 000000045 INF: FPGA: Recv ZDACW 
17-02-28 20:12:38.367 -08 000000090 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:12:38.367 -08 000000090 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:12:38.388 -08 000000086 INF: FC:A, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:12:38.388 -08 000000109 INF: FC:A, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:12:38.388 -08 000000034 INF: FC:A, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:12:38.388 -08 000000069 INF: FC:A, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:12:38.428 -08 000000044 INF: FPGA: Recv TDIBB
17-02-28 20:12:38.428 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:12:38.429 -08 000000090 INF: ======================================
17-02-28 20:12:38.506 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:38.543 -08 000000069 INF: LFT found best fwhm score 2.000747 in 155 ms
17-02-28 20:12:38.543 -08 000000034 INF: LFT found best fwhm score 2.000058 in 155 ms
17-02-28 20:12:38.543 -08 000000069 INF: LFT found good score at index 3989 with fwhm value 2.000747. Next cycle, cycle 4 starting Z position for top surface is at -0.119 mm FC:A, C:3,L:1,T
17-02-28 20:12:38.543 -08 000000034 INF: LFT found good score at index 17 with fwhm value 2.000058. Next cycle, cycle 4 starting Z position for top surface is at -0.119 mm FC:A, C:3,L:1,T
17-02-28 20:12:38.543 -08 000000109 INF: LFT found best fwhm score 2.172683 in 155 ms
17-02-28 20:12:38.543 -08 000000109 INF: LFT found good score at index 2617 with fwhm value 2.172683. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:1,T
17-02-28 20:12:38.543 -08 000000086 INF: LFT found best fwhm score 2.000087 in 155 ms
17-02-28 20:12:38.543 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:12:38.543 -08 000000086 INF: LFT found good score at index 3305 with fwhm value 2.000087. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:1,T
17-02-28 20:12:38.543 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:12:38.544 -08 000000086 INF: ===================LookupFocusTracking===================
17-02-28 20:12:38.544 -08 000000109 INF: ======================================
17-02-28 20:12:38.544 -08 000000069 INF: ======================================
17-02-28 20:12:38.544 -08 000000086 INF: ======================================
17-02-28 20:12:38.544 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:12:38.545 -08 000000034 INF: ======================================
17-02-28 20:12:38.546 -08 000000062 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:12:38.547 -08 000000062 INF: LFT weighted average best Z for top surface is at -0.119mm FC:A, C:3,L:1,T
17-02-28 20:12:38.547 -08 000000062 INF: ======================================
17-02-28 20:12:38.548 -08 000000068 INF: ======================================
17-02-28 20:12:38.550 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:38.550 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:12:38.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:38.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:12:38.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:38.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:12:38.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:38.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:12:38.552 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:38.552 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011===================
17-02-28 20:12:38.552 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011===================
17-02-28 20:12:38.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:12:38.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 5.584931 Y = 39.70011===================
17-02-28 20:12:38.553 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:12:38.553 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:12:38.570 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:38.576 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:12:38.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:38.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011===================
17-02-28 20:12:38.576 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:38.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011===================
17-02-28 20:12:38.577 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:12:38.577 -08 000000018 INF: Transformed XStagePosition from 6.692931 mm to 6.68913617520593 mm.
17-02-28 20:12:38.628 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":1,"Tile":1101,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF265","HCSMMF250","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.636 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4676913333833 mm.
17-02-28 20:12:38.636 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2676913333833 mm.
17-02-28 20:12:38.637 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3584413333833 mm.
17-02-28 20:12:38.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:38.640 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:12:38.640 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:38.640 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -117.3 um, section = A_1
17-02-28 20:12:38.642 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:38.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:38.671 -08 000000051 INF: ===================MoveEmissionFilters===================
17-02-28 20:12:38.673 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:12:38.674 -08 000000058 INF: ===================Move X,Y, Parallel===================
17-02-28 20:12:38.674 -08 000000054 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:12:38.677 -08 000000054 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:12:38.684 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:12:38.685 -08 000000106 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:12:38.685 -08 000000106 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:12:38.685 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:12:38.686 -08 000000106 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:12:38.686 -08 000000106 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:12:38.687 -08 000000087 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:12:38.687 -08 000000106 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:12:38.688 -08 000000087 INF: ======================================
17-02-28 20:12:38.688 -08 000000083 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:12:38.689 -08 000000104 INF: ===================Move X Motor without settling===================
17-02-28 20:12:38.689 -08 000000104 INF: X Motor: Xmit PR VM\n
17-02-28 20:12:38.690 -08 000000087 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:12:38.690 -08 000000083 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:12:38.690 -08 000000087 INF: ======================================
17-02-28 20:12:38.691 -08 000000052 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:12:38.692 -08 000000052 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:12:38.692 -08 000000052 INF: ======================================
17-02-28 20:12:38.692 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:12:38.693 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:12:38.693 -08 000000086 INF: ===================Move Y Motor without settling===================
17-02-28 20:12:38.693 -08 000000086 INF: Y Motor: Moving to 64.4677 mm @25.000 mm/sec, started at 14.8193 mm
17-02-28 20:12:38.693 -08 000000086 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:12:38.693 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:38.693 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:38.694 -08 000000101 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:12:38.694 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:12:38.694 -08 000000054 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:12:38.694 -08 000000068 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:12:38.695 -08 000000052 INF: ===================Camera Arm TDI===================
17-02-28 20:12:38.695 -08 000000101 INF: ======================================
17-02-28 20:12:38.695 -08 000000068 INF: ======================================
17-02-28 20:12:38.695 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:12:38.696 -08 000000054 INF: ======================================
17-02-28 20:12:38.696 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:12:38.696 -08 000000052 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:12:38.696 -08 000000090 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:12:38.697 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:12:38.697 -08 000000085 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:12:38.697 -08 000000101 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:12:38.697 -08 000000052 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:12:38.697 -08 000000054 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:12:38.698 -08 000000054 INF: ======================================
17-02-28 20:12:38.698 -08 000000064 INF: ======================================
17-02-28 20:12:38.698 -08 000000101 INF: ======================================
17-02-28 20:12:38.700 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:12:38.701 -08 000000085 INF: ======================================
17-02-28 20:12:38.701 -08 000000087 INF: ======================================
17-02-28 20:12:38.704 -08 000000083 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:12:38.705 -08 000000083 INF: ======================================
17-02-28 20:12:38.706 -08 000000051 INF: ======================================
17-02-28 20:12:38.706 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":1,"Tile":1105,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF280","HCSMMF214","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.714 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":1,"Tile":1106,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF284","HCSMMF210","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.723 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":1,"Tile":1103,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF213","HCSMMF255","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.726 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":1,"Tile":1110,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF212","HCSMMF287","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.740 -08 000000044 INF: FPGA: Recv ZSEL 
17-02-28 20:12:38.742 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:12:38.742 -08 000000104 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:12:38.742 -08 000000104 INF: X Motor: Xmit PR VI\n
17-02-28 20:12:38.742 -08 000000090 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:12:38.742 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:12:38.742 -08 000000086 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:12:38.742 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:38.755 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":1,"Tile":1109,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF238","HCSMMF244","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.756 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":1,"Tile":1114,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF266","HCSMMF278","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.763 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":1,"Tile":1102,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF256","HCSMMF246","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.776 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":1,"Tile":1104,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF276","HCSMMF263","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.783 -08 000000110 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":1,"Tile":1107,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF273","HCSMMF188","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.784 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":1,"Tile":1112,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF194","HCSMMF226","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.787 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":1,"Tile":1111,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF286","HCSMMF241","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.792 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":1,"Tile":1116,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF217","HCSMMF183","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.797 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":1,"Tile":1108,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF237","HCSMMF282","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.801 -08 000000100 INF: FPGA: Recv TDIBB
17-02-28 20:12:38.801 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:12:38.803 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:12:38.803 -08 000000104 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:12:38.803 -08 000000104 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:12:38.803 -08 000000104 INF: X Motor: Moving to 6.6891 mm @15.000 mm/sec, started at 5.5967 mm
17-02-28 20:12:38.803 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:38.803 -08 000000104 INF: X Motor: Xmit MA -21427\n
17-02-28 20:12:38.803 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":1,"Tile":1113,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF205","HCSMMF207","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.804 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:12:38.804 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:38.804 -08 000000090 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:12:38.805 -08 000000090 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:12:38.805 -08 000000090 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:12:38.805 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":1,"Tile":1115,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF249","HCSMMF257","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.807 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":1,"Tile":1118,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF199","HCSMMF254","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.808 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":1,"Tile":1117,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF182","HCSMMF272","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.809 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":1,"Tile":1120,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF178","HCSMMF181","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.809 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":1,"Tile":1119,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF230","HCSMMF179","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.810 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":1,"Tile":1124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF203","HCSMMF185","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.811 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":1,"Tile":1121,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF268","HCSMMF220","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.812 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":1,"Tile":1125,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF275","HCSMMF227","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.823 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:38.823 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":1,"Tile":1123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF261","HCSMMF180","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.824 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":1,"Tile":1122,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF283","HCSMMF240","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.825 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":1,"Tile":1127,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF201","HCSMMF258","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.826 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":1,"Tile":1128,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF197","HCSMMF211","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.827 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":1,"Tile":1126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF192","HCSMMF285","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:38.829 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:38.835 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:12:38.865 -08 000000030 INF: FPGA: Recv ZSTEP 
17-02-28 20:12:38.865 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:38.867 -08 000000104 INF: X Motor: Recv MA -21427\r\n>
17-02-28 20:12:38.867 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:12:38.867 -08 000000086 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:38.867 -08 000000104 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:12:38.867 -08 000000086 INF: Y Motor: Set target position to 5946769 encoder counts
17-02-28 20:12:38.867 -08 000000086 INF: Y Motor: Xmit s r0xca 5946769\r
17-02-28 20:12:38.867 -08 000000090 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:12:38.867 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:38.869 -08 000000090 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:12:38.869 -08 000000090 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:12:38.869 -08 000000090 INF: Z Motor: Arming to move to -0.0773 mm
17-02-28 20:12:38.869 -08 000000090 INF: FPGA: Xmit ZYT 6426769 4\n
17-02-28 20:12:38.881 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:38.928 -08 000000068 INF: FPGA: Recv ZYT 
17-02-28 20:12:38.928 -08 000000090 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1481933 enc / 14.819 mm / ) = 6426769 enc / 64.268 mm
17-02-28 20:12:38.928 -08 000000090 INF: FPGA: Xmit ZARM 20271\n
17-02-28 20:12:38.929 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:12:38.929 -08 000000086 INF: Y Motor: Start the move command
17-02-28 20:12:38.929 -08 000000086 INF: Y Motor: Xmit t 1\r
17-02-28 20:12:38.933 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:38.933 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:12:38.970 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:38.976 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:12:38.988 -08 000000101 INF: FPGA: Recv ZARM
17-02-28 20:12:38.988 -08 000000090 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.1032 ms
17-02-28 20:12:38.988 -08 000000090 INF: Z Motor: ArmAbsStepped took 118.6548 ms
17-02-28 20:12:38.988 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:38.990 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:12:38.990 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:12:38.990 -08 000000086 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:12:38.990 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:38.991 -08 000000090 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:12:38.992 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:12:38.993 -08 000000090 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:12:38.994 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:12:38.995 -08 000000090 INF: ======================================
17-02-28 20:12:39.068 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:39.074 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:12:39.116 -08 000000086 INF: Y Motor: Unshifted Position: 1064625
17-02-28 20:12:39.131 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:39.162 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:39.166 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:39.168 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:12:39.194 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:39.269 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:39.290 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:39.298 -08 000000052 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:12:39.298 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:12:39.298 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:12:39.313 -08 000000052 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:12:39.315 -08 000000052 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:12:39.428 -08 000000086 INF: Y Motor: Unshifted Position: 1776103
17-02-28 20:12:39.444 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:39.478 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:39.489 -08 000000104 INF: X Motor: Xmit PR ER\n
17-02-28 20:12:39.506 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:39.553 -08 000000104 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:12:39.553 -08 000000104 INF: X Motor: Moved to 6.6880 after 686 ms
17-02-28 20:12:39.553 -08 000000104 INF: ======================================
17-02-28 20:12:39.572 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:12:39.603 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:39.741 -08 000000086 INF: Y Motor: Unshifted Position: 2554454
17-02-28 20:12:39.756 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:39.791 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:39.816 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:39.912 -08 000000052 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:12:39.912 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:12:39.912 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:12:39.914 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:39.928 -08 000000052 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:12:39.930 -08 000000052 INF: ===================Camera Arm TDI===================
17-02-28 20:12:39.931 -08 000000052 INF: ======================================
17-02-28 20:12:39.932 -08 000000106 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:12:39.933 -08 000000106 INF: ======================================
17-02-28 20:12:40.052 -08 000000086 INF: Y Motor: Unshifted Position: 3332732
17-02-28 20:12:40.066 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:40.102 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:40.130 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:40.130 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8)===================
17-02-28 20:12:40.131 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8)===================
17-02-28 20:12:40.131 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:12:40.131 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:12:40.228 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:40.363 -08 000000086 INF: Y Motor: Unshifted Position: 4110304
17-02-28 20:12:40.413 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:40.539 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:40.677 -08 000000086 INF: Y Motor: Unshifted Position: 4888563
17-02-28 20:12:40.727 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:40.852 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:40.989 -08 000000086 INF: Y Motor: Unshifted Position: 5670599
17-02-28 20:12:41.039 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:41.131 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8)===================
17-02-28 20:12:41.131 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:12:41.162 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:41.302 -08 000000086 INF: Y Motor: Unshifted Position: 5946771
17-02-28 20:12:41.302 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:12:41.302 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:41.361 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:12:41.361 -08 000000086 INF: Y Motor: Moved to 64.4677 after 2371 ms
17-02-28 20:12:41.361 -08 000000086 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:12:41.426 -08 000000086 INF: Y Motor: Recv v 4096\r
17-02-28 20:12:41.426 -08 000000086 INF: Y Motor: Status After move finished OK:
17-02-28 20:12:41.426 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:41.487 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:12:41.487 -08 000000086 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:41.487 -08 000000086 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:12:41.549 -08 000000086 INF: Y Motor: Recv v 402653184\r
17-02-28 20:12:41.549 -08 000000086 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:12:41.549 -08 000000086 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:12:41.549 -08 000000086 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:12:41.611 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:12:41.611 -08 000000086 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:12:41.611 -08 000000086 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:12:41.611 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:41.675 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:12:41.675 -08 000000086 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:12:41.675 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:41.735 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:12:41.735 -08 000000086 INF: ======================================
17-02-28 20:12:41.736 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:12:41.737 -08 000000058 INF: ======================================
17-02-28 20:12:41.738 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:41.739 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:41.739 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:12:41.739 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:12:41.799 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:12:41.799 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:12:41.859 -08 000000058 INF: FPGA: Recv ZFREQCL
17-02-28 20:12:41.859 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:12:41.859 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:41.860 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:12:41.921 -08 000000069 INF: FPGA: Recv TDIYERD 6446771
17-02-28 20:12:41.921 -08 000000018 INF: Before scan, Y encoder from FPGA = 6446771 counts (64.468 mm)
17-02-28 20:12:41.922 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:41.922 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:41.923 -08 000000034 INF: ===================TDI FPGA Arm===================
17-02-28 20:12:41.923 -08 000000102 INF: ===================Set YMotor gains for scans===================
17-02-28 20:12:41.923 -08 000000102 INF: ======================================
17-02-28 20:12:41.923 -08 000000034 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:12:41.924 -08 000000034 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:12:41.924 -08 000000034 INF: FPGA: Xmit TDIYPOS 6335844\n
17-02-28 20:12:41.986 -08 000000058 INF: FPGA: Recv TDIYPOS
17-02-28 20:12:41.986 -08 000000034 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:12:41.988 -08 000000034 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:12:41.988 -08 000000034 INF: FPGA: Xmit TDIYARM3 139264 6426769 1 1\n
17-02-28 20:12:42.047 -08 000000069 INF: FPGA: Recv TDIYARM3
17-02-28 20:12:42.047 -08 000000034 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:12:42.048 -08 000000034 INF: ===================TDI FPGA Arm===================
17-02-28 20:12:42.049 -08 000000034 INF: ======================================
17-02-28 20:12:42.050 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:42.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:42.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:42.052 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:42.052 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:42.053 -08 000000104 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:12:42.053 -08 000000044 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:12:42.053 -08 000000104 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:12:42.053 -08 000000104 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:12:42.053 -08 000000104 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:12:42.053 -08 000000044 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:12:42.053 -08 000000104 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:12:42.054 -08 000000044 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:12:42.054 -08 000000044 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:12:42.055 -08 000000044 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:12:42.131 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8)===================
17-02-28 20:12:42.131 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:12:42.422 -08 000000034 INF: FPGA: Recv EX2MV
17-02-28 20:12:42.422 -08 000000034 INF: FPGA: Recv EX1MV
17-02-28 20:12:42.422 -08 000000044 INF: Excitation Filter 1: Moved -107 steps in 368.3635 ms
17-02-28 20:12:42.422 -08 000000104 INF: Excitation Filter 2: Moved -107 steps in 368.5623 ms
17-02-28 20:12:42.422 -08 000000044 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.5677 ms
17-02-28 20:12:42.422 -08 000000044 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.6961 ms
17-02-28 20:12:42.422 -08 000000104 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.7224 ms
17-02-28 20:12:42.422 -08 000000104 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.9014 ms
17-02-28 20:12:42.423 -08 000000044 INF: ======================================
17-02-28 20:12:42.423 -08 000000104 INF: ======================================
17-02-28 20:12:42.424 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:42.425 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:42.426 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:12:42.426 -08 000000109 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:42.426 -08 000000090 INF: ===================FPGA Z Wait===================
17-02-28 20:12:42.426 -08 000000054 INF: ===================Move Y Motor without settling===================
17-02-28 20:12:42.426 -08 000000090 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:12:42.426 -08 000000054 INF: Y Motor: Moving to 14.8194 mm @6.500 mm/sec, started at 64.4677 mm
17-02-28 20:12:42.426 -08 000000054 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:12:42.426 -08 000000054 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:42.427 -08 000000038 INF: ===================Camera TDI, Parallel===================
17-02-28 20:12:42.427 -08 000000109 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:12:42.428 -08 000000109 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:12:42.428 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:12:42.428 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:12:42.429 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:42.429 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:42.432 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:42.432 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:42.487 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:12:42.487 -08 000000054 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:12:42.487 -08 000000054 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:42.548 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:12:42.548 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:42.579 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:42.579 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:42.582 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:42.582 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:42.611 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:12:42.611 -08 000000054 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:42.611 -08 000000054 INF: Y Motor: Set target position to 981935 encoder counts
17-02-28 20:12:42.611 -08 000000054 INF: Y Motor: Xmit s r0xca 981935\r
17-02-28 20:12:42.674 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:12:42.674 -08 000000054 INF: Y Motor: Start the move command
17-02-28 20:12:42.674 -08 000000054 INF: Y Motor: Xmit t 1\r
17-02-28 20:12:42.729 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:42.729 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:42.732 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:42.732 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:42.736 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:12:42.736 -08 000000054 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:12:42.736 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:42.796 -08 000000050 INF: FPGA: Recv ZWAIT 
17-02-28 20:12:42.796 -08 000000090 INF: ======================================
17-02-28 20:12:42.860 -08 000000054 INF: Y Motor: Unshifted Position: 5884911
17-02-28 20:12:42.879 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:12:42.879 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:12:42.879 -08 000000062 INF: ===================Camera #0 Frame #5===================
17-02-28 20:12:42.882 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:12:42.882 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:12:42.882 -08 000000068 INF: ===================Camera #2 Frame #5===================
17-02-28 20:12:42.910 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:43.033 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:43.044 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:12:43.044 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:12:43.044 -08 000000062 INF: ===================Camera #0 Frame #11===================
17-02-28 20:12:43.048 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:12:43.048 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:12:43.048 -08 000000068 INF: ===================Camera #2 Frame #11===================
17-02-28 20:12:43.132 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8)===================
17-02-28 20:12:43.132 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:12:43.171 -08 000000054 INF: Y Motor: Unshifted Position: 5682547
17-02-28 20:12:43.213 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:12:43.213 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:12:43.213 -08 000000062 INF: ===================Camera #0 Frame #17===================
17-02-28 20:12:43.217 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:12:43.217 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:12:43.217 -08 000000068 INF: ===================Camera #2 Frame #17===================
17-02-28 20:12:43.221 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:43.347 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:43.381 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:12:43.381 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:12:43.381 -08 000000062 INF: ===================Camera #0 Frame #23===================
17-02-28 20:12:43.386 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:12:43.386 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:12:43.386 -08 000000068 INF: ===================Camera #2 Frame #23===================
17-02-28 20:12:43.482 -08 000000054 INF: Y Motor: Unshifted Position: 5480406
17-02-28 20:12:43.532 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:43.549 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:12:43.549 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:12:43.549 -08 000000062 INF: ===================Camera #0 Frame #29===================
17-02-28 20:12:43.555 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:12:43.555 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:12:43.555 -08 000000068 INF: ===================Camera #2 Frame #29===================
17-02-28 20:12:43.658 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:43.717 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:12:43.717 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:12:43.717 -08 000000062 INF: ===================Camera #0 Frame #35===================
17-02-28 20:12:43.724 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:12:43.724 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:12:43.724 -08 000000068 INF: ===================Camera #2 Frame #36===================
17-02-28 20:12:43.795 -08 000000054 INF: Y Motor: Unshifted Position: 5277381
17-02-28 20:12:43.845 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:43.886 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:12:43.886 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:12:43.886 -08 000000062 INF: ===================Camera #0 Frame #42===================
17-02-28 20:12:43.897 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:12:43.897 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:12:43.897 -08 000000068 INF: ===================Camera #2 Frame #42===================
17-02-28 20:12:43.973 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:44.057 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:12:44.057 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:12:44.057 -08 000000062 INF: ===================Camera #0 Frame #48===================
17-02-28 20:12:44.066 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:12:44.066 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:12:44.066 -08 000000068 INF: ===================Camera #2 Frame #48===================
17-02-28 20:12:44.106 -08 000000054 INF: Y Motor: Unshifted Position: 5074368
17-02-28 20:12:44.132 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8)===================
17-02-28 20:12:44.132 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:12:44.156 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:44.234 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:12:44.234 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:12:44.234 -08 000000062 INF: ===================Camera #0 Frame #54===================
17-02-28 20:12:44.244 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:12:44.244 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:12:44.244 -08 000000068 INF: ===================Camera #2 Frame #55===================
17-02-28 20:12:44.282 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:44.403 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:12:44.403 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:12:44.403 -08 000000062 INF: ===================Camera #0 Frame #61===================
17-02-28 20:12:44.420 -08 000000054 INF: Y Motor: Unshifted Position: 4870271
17-02-28 20:12:44.425 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:12:44.425 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:12:44.425 -08 000000068 INF: ===================Camera #2 Frame #61===================
17-02-28 20:12:44.470 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:44.574 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:12:44.574 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:12:44.574 -08 000000062 INF: ===================Camera #0 Frame #67===================
17-02-28 20:12:44.593 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:44.594 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:12:44.594 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:12:44.594 -08 000000068 INF: ===================Camera #2 Frame #68===================
17-02-28 20:12:44.731 -08 000000054 INF: Y Motor: Unshifted Position: 4668122
17-02-28 20:12:44.743 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:12:44.743 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:12:44.743 -08 000000062 INF: ===================Camera #0 Frame #73===================
17-02-28 20:12:44.766 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:12:44.766 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:12:44.766 -08 000000068 INF: ===================Camera #2 Frame #74===================
17-02-28 20:12:44.781 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:44.907 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:44.919 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:12:44.919 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:12:44.919 -08 000000062 INF: ===================Camera #0 Frame #80===================
17-02-28 20:12:44.944 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:12:44.944 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:12:44.944 -08 000000068 INF: ===================Camera #2 Frame #81===================
17-02-28 20:12:45.042 -08 000000054 INF: Y Motor: Unshifted Position: 4465736
17-02-28 20:12:45.090 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:12:45.090 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:12:45.090 -08 000000062 INF: ===================Camera #0 Frame #86===================
17-02-28 20:12:45.092 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:45.116 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:12:45.116 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:12:45.116 -08 000000068 INF: ===================Camera #2 Frame #87===================
17-02-28 20:12:45.132 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8)===================
17-02-28 20:12:45.132 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8)===================
17-02-28 20:12:45.132 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:12:45.133 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8)===================
17-02-28 20:12:45.218 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:45.231 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:12:45.263 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:12:45.263 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:12:45.263 -08 000000062 INF: ===================Camera #0 Frame #92===================
17-02-28 20:12:45.286 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:12:45.286 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:12:45.286 -08 000000068 INF: ===================Camera #2 Frame #93===================
17-02-28 20:12:45.308 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`19200 (0x03)\r\n(0xFF)
17-02-28 20:12:45.308 -08 000000042 INF: Current Position of Pump is: 19200
17-02-28 20:12:45.356 -08 000000054 INF: Y Motor: Unshifted Position: 4261640
17-02-28 20:12:45.406 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:45.408 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:12:45.431 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:12:45.431 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:12:45.431 -08 000000062 INF: ===================Camera #0 Frame #98===================
17-02-28 20:12:45.455 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:12:45.455 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:12:45.455 -08 000000068 INF: ===================Camera #2 Frame #99===================
17-02-28 20:12:45.496 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`19200 (0x03)\r\n(0xFF)
17-02-28 20:12:45.496 -08 000000042 INF: Current Position of Pump is: 19200
17-02-28 20:12:45.496 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:12:45.529 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:45.596 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V6400OD19200R\r
17-02-28 20:12:45.599 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:12:45.599 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:12:45.599 -08 000000062 INF: ===================Camera #0 Frame #105===================
17-02-28 20:12:45.633 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:12:45.633 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:12:45.633 -08 000000068 INF: ===================Camera #2 Frame #106===================
17-02-28 20:12:45.667 -08 000000054 INF: Y Motor: Unshifted Position: 4059266
17-02-28 20:12:45.681 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:45.717 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:45.771 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:12:45.771 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:12:45.771 -08 000000062 INF: ===================Camera #0 Frame #111===================
17-02-28 20:12:45.781 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:45.813 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:12:45.813 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:12:45.813 -08 000000068 INF: ===================Camera #2 Frame #113===================
17-02-28 20:12:45.841 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:45.870 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:45.948 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:12:45.948 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:12:45.948 -08 000000062 INF: ===================Camera #0 Frame #118===================
17-02-28 20:12:45.979 -08 000000054 INF: Y Motor: Unshifted Position: 3856471
17-02-28 20:12:45.986 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:12:45.986 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:12:45.986 -08 000000068 INF: ===================Camera #2 Frame #119===================
17-02-28 20:12:46.029 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:46.120 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:46.123 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:12:46.123 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:12:46.123 -08 000000062 INF: ===================Camera #0 Frame #124===================
17-02-28 20:12:46.155 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:46.155 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:12:46.155 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:12:46.155 -08 000000068 INF: ===================Camera #2 Frame #125===================
17-02-28 20:12:46.181 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:46.291 -08 000000054 INF: Y Motor: Unshifted Position: 3654103
17-02-28 20:12:46.292 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:12:46.292 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:12:46.292 -08 000000062 INF: ===================Camera #0 Frame #130===================
17-02-28 20:12:46.325 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:12:46.325 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:12:46.325 -08 000000068 INF: ===================Camera #2 Frame #131===================
17-02-28 20:12:46.341 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:46.432 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:46.460 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:12:46.460 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:12:46.460 -08 000000062 INF: ===================Camera #0 Frame #136===================
17-02-28 20:12:46.467 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:46.494 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:12:46.494 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:12:46.494 -08 000000068 INF: ===================Camera #2 Frame #138===================
17-02-28 20:12:46.496 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:46.605 -08 000000054 INF: Y Motor: Unshifted Position: 3449778
17-02-28 20:12:46.629 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:12:46.629 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:12:46.629 -08 000000062 INF: ===================Camera #0 Frame #143===================
17-02-28 20:12:46.655 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:46.666 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:12:46.666 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:12:46.666 -08 000000068 INF: ===================Camera #2 Frame #144===================
17-02-28 20:12:46.746 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:46.778 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:46.800 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:12:46.800 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:12:46.800 -08 000000062 INF: ===================Camera #0 Frame #149===================
17-02-28 20:12:46.805 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:46.835 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:12:46.835 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:12:46.835 -08 000000068 INF: ===================Camera #2 Frame #150===================
17-02-28 20:12:46.917 -08 000000054 INF: Y Motor: Unshifted Position: 3246989
17-02-28 20:12:46.967 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:46.968 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:12:46.968 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:12:46.968 -08 000000062 INF: ===================Camera #0 Frame #155===================
17-02-28 20:12:47.004 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:12:47.004 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:12:47.004 -08 000000068 INF: ===================Camera #2 Frame #156===================
17-02-28 20:12:47.055 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:47.090 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:47.119 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:47.136 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:12:47.136 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:12:47.136 -08 000000062 INF: ===================Camera #0 Frame #161===================
17-02-28 20:12:47.173 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:12:47.173 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:12:47.173 -08 000000068 INF: ===================Camera #2 Frame #163===================
17-02-28 20:12:47.228 -08 000000054 INF: Y Motor: Unshifted Position: 3043546
17-02-28 20:12:47.278 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:47.305 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:12:47.305 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:12:47.305 -08 000000062 INF: ===================Camera #0 Frame #167===================
17-02-28 20:12:47.345 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:12:47.345 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:12:47.345 -08 000000068 INF: ===================Camera #2 Frame #169===================
17-02-28 20:12:47.369 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:47.405 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:47.430 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:47.474 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:12:47.474 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:12:47.474 -08 000000062 INF: ===================Camera #0 Frame #174===================
17-02-28 20:12:47.516 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:12:47.516 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:12:47.517 -08 000000068 INF: ===================Camera #2 Frame #175===================
17-02-28 20:12:47.539 -08 000000054 INF: Y Motor: Unshifted Position: 2841830
17-02-28 20:12:47.589 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:47.645 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:12:47.645 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:12:47.645 -08 000000062 INF: ===================Camera #0 Frame #180===================
17-02-28 20:12:47.680 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:47.686 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:12:47.686 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:12:47.686 -08 000000068 INF: ===================Camera #2 Frame #181===================
17-02-28 20:12:47.715 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:47.741 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:47.814 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:12:47.814 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:12:47.814 -08 000000062 INF: ===================Camera #0 Frame #186===================
17-02-28 20:12:47.852 -08 000000054 INF: Y Motor: Unshifted Position: 2638379
17-02-28 20:12:47.856 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:12:47.856 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:12:47.856 -08 000000068 INF: ===================Camera #2 Frame #188===================
17-02-28 20:12:47.902 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:47.983 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:12:47.983 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:12:47.983 -08 000000062 INF: ===================Camera #0 Frame #192===================
17-02-28 20:12:47.991 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:48.028 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:48.028 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:12:48.028 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:12:48.028 -08 000000068 INF: ===================Camera #2 Frame #194===================
17-02-28 20:12:48.053 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:48.151 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:12:48.151 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:12:48.151 -08 000000062 INF: ===================Camera #0 Frame #199===================
17-02-28 20:12:48.165 -08 000000054 INF: Y Motor: Unshifted Position: 2435373
17-02-28 20:12:48.198 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:12:48.198 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:12:48.198 -08 000000068 INF: ===================Camera #2 Frame #200===================
17-02-28 20:12:48.215 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:48.303 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:48.322 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:12:48.322 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:12:48.322 -08 000000062 INF: ===================Camera #0 Frame #205===================
17-02-28 20:12:48.340 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:48.367 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:48.367 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:12:48.367 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:12:48.367 -08 000000068 INF: ===================Camera #2 Frame #207===================
17-02-28 20:12:48.476 -08 000000054 INF: Y Motor: Unshifted Position: 2233220
17-02-28 20:12:48.490 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:12:48.490 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:12:48.490 -08 000000062 INF: ===================Camera #0 Frame #211===================
17-02-28 20:12:48.526 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:48.539 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:12:48.539 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:12:48.539 -08 000000068 INF: ===================Camera #2 Frame #213===================
17-02-28 20:12:48.617 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:48.652 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:48.658 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:12:48.658 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:12:48.658 -08 000000062 INF: ===================Camera #0 Frame #217===================
17-02-28 20:12:48.678 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:48.708 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:12:48.708 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:12:48.708 -08 000000068 INF: ===================Camera #2 Frame #219===================
17-02-28 20:12:48.787 -08 000000054 INF: Y Motor: Unshifted Position: 2030847
17-02-28 20:12:48.826 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:12:48.826 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:12:48.826 -08 000000062 INF: ===================Camera #0 Frame #223===================
17-02-28 20:12:48.837 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:48.877 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:12:48.877 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:12:48.877 -08 000000068 INF: ===================Camera #2 Frame #225===================
17-02-28 20:12:48.928 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:48.964 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:48.990 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:48.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Pumping Reagent HB2 (8)===================
17-02-28 20:12:48.990 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:12:48.994 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:12:48.994 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:12:48.994 -08 000000062 INF: ===================Camera #0 Frame #230===================
17-02-28 20:12:49.046 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:12:49.046 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:12:49.046 -08 000000068 INF: ===================Camera #2 Frame #232===================
17-02-28 20:12:49.099 -08 000000054 INF: Y Motor: Unshifted Position: 1828046
17-02-28 20:12:49.149 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:49.165 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:12:49.165 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:12:49.165 -08 000000062 INF: ===================Camera #0 Frame #236===================
17-02-28 20:12:49.218 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:12:49.218 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:12:49.218 -08 000000068 INF: ===================Camera #2 Frame #238===================
17-02-28 20:12:49.275 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:49.333 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:12:49.333 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:12:49.333 -08 000000062 INF: ===================Camera #0 Frame #242===================
17-02-28 20:12:49.387 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:12:49.387 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:12:49.387 -08 000000068 INF: ===================Camera #2 Frame #244===================
17-02-28 20:12:49.413 -08 000000054 INF: Y Motor: Unshifted Position: 1623732
17-02-28 20:12:49.463 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:49.501 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:12:49.501 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:12:49.501 -08 000000062 INF: ===================Camera #0 Frame #248===================
17-02-28 20:12:49.556 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:12:49.556 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:12:49.556 -08 000000068 INF: ===================Camera #2 Frame #250===================
17-02-28 20:12:49.587 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:49.669 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 253, frameCount = 254.
17-02-28 20:12:49.669 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 254
17-02-28 20:12:49.669 -08 000000062 INF: ===================Camera #0 Frame #254===================
17-02-28 20:12:49.724 -08 000000054 INF: Y Motor: Unshifted Position: 1421576
17-02-28 20:12:49.725 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:12:49.725 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:12:49.725 -08 000000068 INF: ===================Camera #2 Frame #257===================
17-02-28 20:12:49.774 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:49.837 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:12:49.837 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:12:49.837 -08 000000062 INF: ===================Camera #0 Frame #261===================
17-02-28 20:12:49.897 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:12:49.897 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:12:49.897 -08 000000068 INF: ===================Camera #2 Frame #263===================
17-02-28 20:12:49.898 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:50.008 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:12:50.008 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:12:50.008 -08 000000062 INF: ===================Camera #0 Frame #267===================
17-02-28 20:12:50.036 -08 000000054 INF: Y Motor: Unshifted Position: 1218556
17-02-28 20:12:50.066 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:12:50.066 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:12:50.066 -08 000000068 INF: ===================Camera #2 Frame #269===================
17-02-28 20:12:50.086 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:50.090 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:12:50.160 -08 000000010 INF: FPGA: Recv TDIYWAIT
17-02-28 20:12:50.160 -08 000000109 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:50.162 -08 000000109 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:12:50.162 -08 000000058 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:12:50.163 -08 000000032 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:12:50.163 -08 000000058 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:12:50.163 -08 000000058 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:12:50.163 -08 000000058 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:12:50.163 -08 000000058 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:12:50.163 -08 000000032 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:12:50.163 -08 000000032 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:12:50.163 -08 000000032 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:12:50.164 -08 000000032 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:12:50.176 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:50.176 -08 000000062 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:12:50.176 -08 000000062 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:12:50.176 -08 000000062 INF: ===================Camera #0 Frame #272===================
17-02-28 20:12:50.191 -08 000000062 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:12:50.192 -08 000000062 INF: ===================CameraTDI Cleanup===================
17-02-28 20:12:50.212 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:50.276 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:50.316 -08 000000062 INF: Camera #0 ReleaseBuffer
17-02-28 20:12:50.316 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:12:50.316 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:12:50.316 -08 000000068 INF: ===================Camera #2 Frame #272===================
17-02-28 20:12:50.316 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:12:50.325 -08 000000068 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:12:50.326 -08 000000068 INF: ===================CameraTDI Cleanup===================
17-02-28 20:12:50.344 -08 000000062 INF: ======================================
17-02-28 20:12:50.347 -08 000000054 INF: Y Motor: Unshifted Position: 1016409
17-02-28 20:12:50.364 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:50.397 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:50.491 -08 000000068 INF: Camera #2 ReleaseBuffer
17-02-28 20:12:50.491 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:12:50.523 -08 000000068 INF: ======================================
17-02-28 20:12:50.524 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:12:50.525 -08 000000038 INF: ======================================
17-02-28 20:12:50.532 -08 000000110 INF: FPGA: Recv EX2MV
17-02-28 20:12:50.532 -08 000000110 INF: FPGA: Recv EX1MV
17-02-28 20:12:50.532 -08 000000032 INF: Excitation Filter 1: Moved 107 steps in 368.8976 ms
17-02-28 20:12:50.532 -08 000000058 INF: Excitation Filter 2: Moved 107 steps in 369.1269 ms
17-02-28 20:12:50.532 -08 000000058 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.2165 ms
17-02-28 20:12:50.532 -08 000000058 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.2862 ms
17-02-28 20:12:50.532 -08 000000032 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.0037 ms
17-02-28 20:12:50.532 -08 000000032 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.3869 ms
17-02-28 20:12:50.532 -08 000000058 INF: ======================================
17-02-28 20:12:50.532 -08 000000032 INF: ======================================
17-02-28 20:12:50.534 -08 000000054 INF: Y Motor: Unshifted Position: 981934
17-02-28 20:12:50.534 -08 000000054 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:12:50.534 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:50.534 -08 000000109 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:50.535 -08 000000109 INF: ======================================
17-02-28 20:12:50.599 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:12:50.599 -08 000000054 INF: Y Motor: Moved to 14.8193 after 7862 ms
17-02-28 20:12:50.599 -08 000000054 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:12:50.614 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:50.661 -08 000000054 INF: Y Motor: Recv v 4097\r
17-02-28 20:12:50.661 -08 000000054 INF: Y Motor: Status After move finished OK:
17-02-28 20:12:50.661 -08 000000054 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:50.675 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:50.675 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry===================
17-02-28 20:12:50.675 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Closing shutoff valve===================
17-02-28 20:12:50.722 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:12:50.722 -08 000000054 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:50.722 -08 000000054 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:12:50.784 -08 000000054 INF: Y Motor: Recv v 134217728\r
17-02-28 20:12:50.784 -08 000000054 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:12:50.784 -08 000000054 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:12:50.784 -08 000000054 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:12:50.848 -08 000000054 INF: Y Motor: Recv v 0\r
17-02-28 20:12:50.848 -08 000000054 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:12:50.848 -08 000000054 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:12:50.848 -08 000000054 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:50.911 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:12:50.911 -08 000000054 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:12:50.911 -08 000000054 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:50.973 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:12:50.973 -08 000000054 INF: ======================================
17-02-28 20:12:50.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:50.975 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:12:50.976 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:50.976 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:12:51.032 -08 000000083 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:12:51.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry===================
17-02-28 20:12:51.032 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:12:51.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry===================
17-02-28 20:12:51.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry===================
17-02-28 20:12:51.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Flowcell Temp 20°===================
17-02-28 20:12:51.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Flowcell Temp 20°===================
17-02-28 20:12:51.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Flowcell Temp 20°, FC temperature to 20°===================
17-02-28 20:12:51.094 -08 000000105 INF: FPGA: Recv TDIYERD 1481936
17-02-28 20:12:51.094 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:12:51.158 -08 000000102 INF: FPGA: Recv ZADCR 27547
17-02-28 20:12:51.158 -08 000000018 INF: At scan end Y pos = 14.819 and Z pos = -0.106. Y moved -48.539 mm
17-02-28 20:12:51.158 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:12:51.220 -08 000000109 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:12:51.220 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:12:51.220 -08 000000018 INF: TDIScan finished after 12642.5062 ms
17-02-28 20:12:51.220 -08 000000018 INF: Image[0]: Y should trigger at 63.358 mm, 2nd row was at 64.267 mm (error = 0.909 mm)
17-02-28 20:12:51.220 -08 000000018 INF: Image[2]: Y should trigger at 63.358 mm, 2nd row was at 64.267 mm (error = 0.909 mm)
17-02-28 20:12:51.222 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:51.257 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.901 um
17-02-28 20:12:51.257 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:51.258 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:12:51.284 -08 000000034 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:12:51.285 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:51.286 -08 000000087 INF: ===================Dither Clean Up Command===================
17-02-28 20:12:51.286 -08 000000085 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:12:51.286 -08 000000037 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:12:51.286 -08 000000069 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:12:51.286 -08 000000069 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:12:51.286 -08 000000069 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:12:51.286 -08 000000037 INF: ======================================
17-02-28 20:12:51.286 -08 000000085 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:12:51.286 -08 000000085 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:12:51.287 -08 000000086 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:12:51.287 -08 000000081 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:12:51.288 -08 000000086 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:12:51.290 -08 000000081 INF: ===================LFT:Extracting coords===================
17-02-28 20:12:51.315 -08 000000081 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:12:51.316 -08 000000081 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:12:51.317 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:12:51.317 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:12:51.317 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:12:51.317 -08 000000044 INF: ===================LookupFocusTracking===================
17-02-28 20:12:51.317 -08 000000064 INF: ===================Lookup Focus Tracking===================
17-02-28 20:12:51.317 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:12:51.317 -08 000000044 INF: ===================Lookup Focus Tracking===================
17-02-28 20:12:51.317 -08 000000098 INF: ===================Lookup Focus Tracking===================
17-02-28 20:12:51.345 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:12:51.345 -08 000000085 INF: ======================================
17-02-28 20:12:51.345 -08 000000104 INF: FPGA: Recv ZSTEP 
17-02-28 20:12:51.345 -08 000000104 INF: FPGA: Recv ZSEL 
17-02-28 20:12:51.345 -08 000000086 INF: FPGA: Xmit ZDACW 30756\n
17-02-28 20:12:51.346 -08 000000069 INF: ======================================
17-02-28 20:12:51.391 -08 000000064 INF: FC:A, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:12:51.391 -08 000000052 INF: FC:A, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:12:51.391 -08 000000044 INF: FC:A, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:12:51.392 -08 000000098 INF: FC:A, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:12:51.403 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Flowcell Temp 20°===================
17-02-28 20:12:51.403 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Flowcell Temp 20°===================
17-02-28 20:12:51.404 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Flowcell Temp 20°===================
17-02-28 20:12:51.405 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry, Flowcell Temp 20°===================
17-02-28 20:12:51.405 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry===================
17-02-28 20:12:51.405 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry===================
17-02-28 20:12:51.406 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Pausing Chemistry===================
17-02-28 20:12:51.407 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging===================
17-02-28 20:12:51.407 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging===================
17-02-28 20:12:51.408 -08 000000100 INF: FPGA: Recv ZDACW 
17-02-28 20:12:51.409 -08 000000086 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:12:51.409 -08 000000086 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:12:51.470 -08 000000109 INF: FPGA: Recv TDIBB
17-02-28 20:12:51.470 -08 000000086 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:12:51.471 -08 000000086 INF: ======================================
17-02-28 20:12:51.542 -08 000000064 INF: LFT found best fwhm score 2.000015 in 151 ms
17-02-28 20:12:51.542 -08 000000064 INF: LFT found good score at index 8189 with fwhm value 2.000015. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:1,T
17-02-28 20:12:51.543 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:12:51.543 -08 000000052 INF: LFT found best fwhm score 2.000096 in 152 ms
17-02-28 20:12:51.543 -08 000000052 INF: LFT found good score at index 3177 with fwhm value 2.000096. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:1,T
17-02-28 20:12:51.543 -08 000000044 INF: LFT found best fwhm score 2.132537 in 152 ms
17-02-28 20:12:51.543 -08 000000098 INF: LFT found best fwhm score 2.000176 in 151 ms
17-02-28 20:12:51.543 -08 000000044 INF: LFT found good score at index 2129 with fwhm value 2.132537. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:1,T
17-02-28 20:12:51.543 -08 000000098 INF: LFT found good score at index 1261 with fwhm value 2.000176. Next cycle, cycle 4 starting Z position for top surface is at -0.119 mm FC:A, C:3,L:1,T
17-02-28 20:12:51.543 -08 000000064 INF: ======================================
17-02-28 20:12:51.543 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:12:51.543 -08 000000044 INF: ===================LookupFocusTracking===================
17-02-28 20:12:51.543 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:12:51.543 -08 000000052 INF: ======================================
17-02-28 20:12:51.544 -08 000000098 INF: ======================================
17-02-28 20:12:51.544 -08 000000044 INF: ======================================
17-02-28 20:12:51.544 -08 000000081 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:12:51.545 -08 000000081 INF: LFT weighted average best Z for top surface is at -0.118mm FC:A, C:3,L:1,T
17-02-28 20:12:51.545 -08 000000081 INF: ======================================
17-02-28 20:12:51.547 -08 000000087 INF: ======================================
17-02-28 20:12:51.548 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:51.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:12:51.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:51.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:12:51.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:51.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:12:51.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:51.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:12:51.550 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:12:51.550 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011===================
17-02-28 20:12:51.550 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011===================
17-02-28 20:12:51.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:12:51.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 6.692931 Y = 39.70011===================
17-02-28 20:12:51.551 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Waiting for image analysis===================
17-02-28 20:12:51.551 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging===================
17-02-28 20:12:51.573 -08 000000018 INF: Waited 22 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:12:51.574 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:51.574 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:51.574 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:12:51.574 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:51.575 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:12:51.575 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:12:51.620 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":1,"Tile":1204,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF221","HCSMMF187","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:12:51.630 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:12:51.630 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:12:51.630 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:12:51.704 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:12:51.705 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:12:51.706 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:12:51.706 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:12:51.822 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":1,"Tile":1203,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF248","HCSMMF197","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.826 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":1,"Tile":1201,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF246","HCSMMF277","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.836 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":1,"Tile":1211,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF184","HCSMMF287","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.846 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":1,"Tile":1207,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF249","HCSMMF226","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.848 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":1,"Tile":1202,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF259","HCSMMF283","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.851 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":1,"Tile":1206,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF198","HCSMMF252","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.853 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":1,"Tile":1209,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF195","HCSMMF219","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.854 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":1,"Tile":1212,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF261","HCSMMF218","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.856 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":1,"Tile":1210,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF212","HCSMMF180","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.857 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":1,"Tile":1205,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF257","HCSMMF256","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.860 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":1,"Tile":1213,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF243","HCSMMF254","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.862 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":1,"Tile":1208,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF183","HCSMMF236","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.863 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":1,"Tile":1214,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF181","HCSMMF205","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.864 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":1,"Tile":1220,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF188","HCSMMF220","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.866 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":1,"Tile":1216,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF207","HCSMMF284","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.871 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":1,"Tile":1218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF224","HCSMMF193","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.872 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":1,"Tile":1215,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF208","HCSMMF275","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.873 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":1,"Tile":1217,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF286","HCSMMF229","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.874 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":1,"Tile":1225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF278","HCSMMF231","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.875 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":1,"Tile":1219,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF210","HCSMMF270","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.877 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":1,"Tile":1221,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF276","HCSMMF251","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.879 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":1,"Tile":1222,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF223","HCSMMF230","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.880 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":1,"Tile":1228,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF281","HCSMMF182","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.882 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":1,"Tile":1226,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF266","HCSMMF204","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.885 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":1,"Tile":1227,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF216","HCSMMF206","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.886 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":1,"Tile":1223,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF268","HCSMMF269","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.889 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":1,"Tile":1224,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF191","HCSMMF209","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:12:51.891 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:51.897 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:12:51.991 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:51.992 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:12:52.029 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:52.034 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:12:52.123 -08 000000054 INF: FPGA: Recv MIOCOMPR
17-02-28 20:12:52.123 -08 000000018 INF: Compensator: Moved OutOfPath in 417 ms
17-02-28 20:12:52.123 -08 000000018 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:12:52.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:12:52.125 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:12:52.126 -08 000000052 INF: ===================Move Tilt Motor 2===================
17-02-28 20:12:52.126 -08 000000106 INF: ===================Move Tilt Motor 1===================
17-02-28 20:12:52.126 -08 000000034 INF: ===================Move Tilt Motor 3===================
17-02-28 20:12:52.126 -08 000000052 INF: Tilt Motor 2: Moving to 5.2431 mm, started at 5.2095 mm, delta = 0.0335 mm
17-02-28 20:12:52.126 -08 000000052 INF: FPGA: Xmit T2RD\n
17-02-28 20:12:52.126 -08 000000106 INF: Tilt Motor 1: Moving to 5.1786 mm, started at 5.2794 mm, delta = -0.1008 mm
17-02-28 20:12:52.126 -08 000000034 INF: Tilt Motor 3: Moving to 5.2710 mm, started at 5.2357 mm, delta = 0.0353 mm
17-02-28 20:12:52.127 -08 000000106 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:52.129 -08 000000034 INF: FPGA: Xmit T3RD\n
17-02-28 20:12:52.138 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:52.144 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:12:52.189 -08 000000085 INF: FPGA: Recv T2RD 20510
17-02-28 20:12:52.189 -08 000000085 INF: FPGA: Recv T1RD 20785
17-02-28 20:12:52.189 -08 000000085 INF: FPGA: Recv T3RD 20613
17-02-28 20:12:52.189 -08 000000034 INF: Tilt Motor 3: Encoder: at motor step 3435 + 3/6
17-02-28 20:12:52.189 -08 000000052 INF: Tilt Motor 2: Encoder: at motor step 3418 + 2/6
17-02-28 20:12:52.189 -08 000000052 INF: Tilt Motor 2: Moving to 20642 encoder counts
17-02-28 20:12:52.189 -08 000000106 INF: Tilt Motor 1: Encoder: at motor step 3464 + 1/6
17-02-28 20:12:52.189 -08 000000052 INF: FPGA: Xmit T2MOVETO 20642\n
17-02-28 20:12:52.189 -08 000000106 INF: Tilt Motor 1: Moving to 20388 encoder counts
17-02-28 20:12:52.189 -08 000000034 INF: Tilt Motor 3: Moving to 20752 encoder counts
17-02-28 20:12:52.192 -08 000000106 INF: FPGA: Xmit T1MOVETO 20388\n
17-02-28 20:12:52.193 -08 000000034 INF: FPGA: Xmit T3MOVETO 20752\n
17-02-28 20:12:52.231 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:52.236 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:12:52.313 -08 000000085 INF: FPGA: Recv T2MOVETO 21
17-02-28 20:12:52.313 -08 000000085 INF: FPGA: Recv T3MOVETO 22
17-02-28 20:12:52.313 -08 000000052 INF: Tilt Motor 2: To move from 5.210 to 5.243 (0.034 mm) should take 22 steps, but required 21 steps (0.032 mm). Slippage = -0.002 mm (-0.05%)
17-02-28 20:12:52.313 -08 000000034 INF: Tilt Motor 3: To move from 5.236 to 5.271 (0.035 mm) should take 23 steps, but required 22 steps (0.034 mm). Slippage = -0.002 mm (-0.04%)
17-02-28 20:12:52.313 -08 000000052 INF: FPGA: Xmit T2RD\n
17-02-28 20:12:52.314 -08 000000034 INF: FPGA: Xmit T3RD\n
17-02-28 20:12:52.333 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:12:52.376 -08 000000069 INF: FPGA: Recv T2RD 20635
17-02-28 20:12:52.376 -08 000000069 INF: FPGA: Recv T3RD 20746
17-02-28 20:12:52.376 -08 000000069 INF: FPGA: Recv T1MOVETO 65
17-02-28 20:12:52.376 -08 000000106 INF: Tilt Motor 1: To move from 5.279 to 5.179 (-0.101 mm) should take 66 steps, but required 65 steps (0.099 mm). Slippage = -0.002 mm (0.02%)
17-02-28 20:12:52.376 -08 000000106 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:52.376 -08 000000034 INF: Tilt Motor 3: Encoder: at motor step 3457 + 4/6
17-02-28 20:12:52.376 -08 000000052 INF: Tilt Motor 2: Encoder: at motor step 3439 + 1/6
17-02-28 20:12:52.377 -08 000000034 INF: FPGA: Xmit T3RD\n
17-02-28 20:12:52.379 -08 000000052 INF: FPGA: Xmit T2RD\n
17-02-28 20:12:52.435 -08 000000074 INF: FPGA: Recv T1RD 20393
17-02-28 20:12:52.435 -08 000000074 INF: FPGA: Recv T3RD 20746
17-02-28 20:12:52.435 -08 000000074 INF: FPGA: Recv T2RD 20635
17-02-28 20:12:52.435 -08 000000052 INF: Tilt Motor 2: Encoder: at motor step 3439 + 1/6
17-02-28 20:12:52.435 -08 000000034 INF: Tilt Motor 3: Encoder: at motor step 3457 + 4/6
17-02-28 20:12:52.435 -08 000000106 INF: Tilt Motor 1: Encoder: at motor step 3398 + 5/6
17-02-28 20:12:52.435 -08 000000052 INF: FPGA: Xmit T2RD\n
17-02-28 20:12:52.438 -08 000000034 INF: FPGA: Xmit T3RD\n
17-02-28 20:12:52.439 -08 000000106 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:52.501 -08 000000069 INF: FPGA: Recv T2RD 20635
17-02-28 20:12:52.501 -08 000000069 INF: FPGA: Recv T3RD 20746
17-02-28 20:12:52.501 -08 000000069 INF: FPGA: Recv T1RD 20392
17-02-28 20:12:52.501 -08 000000106 INF: Tilt Motor 1: Encoder: at motor step 3398 + 4/6
17-02-28 20:12:52.501 -08 000000052 INF: Tilt Motor 2: Encoder: at motor step 3439 + 1/6
17-02-28 20:12:52.501 -08 000000052 INF: Tilt Motor 2: After move to 5.2431, error = -0.0018, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:12:52.501 -08 000000034 INF: Tilt Motor 3: Encoder: at motor step 3457 + 4/6
17-02-28 20:12:52.501 -08 000000034 INF: Tilt Motor 3: After move to 5.2710, error = -0.0015, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:12:52.501 -08 000000034 INF: Tilt Motor 3: Moved to 5.2695 after 375.1962 ms
17-02-28 20:12:52.501 -08 000000106 INF: FPGA: Xmit T1RD\n
17-02-28 20:12:52.501 -08 000000052 INF: Tilt Motor 2: Moved to 5.2413 after 375.2594 ms
17-02-28 20:12:52.502 -08 000000034 INF: ======================================
17-02-28 20:12:52.502 -08 000000052 INF: ======================================
17-02-28 20:12:52.562 -08 000000076 INF: FPGA: Recv T1RD 20392
17-02-28 20:12:52.563 -08 000000106 INF: Tilt Motor 1: Encoder: at motor step 3398 + 4/6
17-02-28 20:12:52.563 -08 000000106 INF: Tilt Motor 1: After move to 5.1786, error = 0.0010, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:12:52.563 -08 000000106 INF: Tilt Motor 1: Moved to 5.1796 after 436.7816 ms
17-02-28 20:12:52.563 -08 000000106 INF: ======================================
17-02-28 20:12:52.564 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:12:52.565 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:12:52.572 -08 000000018 INF: Transformed XStagePosition from 8.903931 mm to 8.9039306640625 mm.
17-02-28 20:12:52.580 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:12:52.581 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:12:52.581 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:12:52.581 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:12:52.581 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:12:52.585 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:12:52.585 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:12:52.585 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:12:52.625 -08 000000104 INF: FPGA: Recv ZSTEP 
17-02-28 20:12:52.625 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:12:52.626 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:12:52.626 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1173 mm
17-02-28 20:12:52.626 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:12:52.634 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:12:52.687 -08 000000086 INF: FPGA: Recv ZTRG 
17-02-28 20:12:52.687 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:12:52.749 -08 000000104 INF: FPGA: Recv ZYT 
17-02-28 20:12:52.749 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:12:52.749 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:12:52.811 -08 000000095 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:12:52.811 -08 000000095 INF: FPGA: Recv ZMV 
17-02-28 20:12:52.811 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:12:52.811 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9762 ms
17-02-28 20:12:52.811 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:12:52.873 -08 000000102 INF: FPGA: Recv ZDACR 60292
17-02-28 20:12:52.873 -08 000000018 INF: Z Motor: MoveAndTrigger took 247.5204 ms w/comms
17-02-28 20:12:52.873 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:12:52.873 -08 000000018 INF: Z Motor: MoveAbsStepped took 247.7284 ms
17-02-28 20:12:52.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:12:52.874 -08 000000018 INF: Transformed XStagePosition from 8.903931 mm to 8.9039306640625 mm.
17-02-28 20:12:52.883 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:12:52.883 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:12:52.883 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:12:52.883 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:12:52.883 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:12:52.936 -08 000000085 INF: FPGA: Recv ZSTEP 
17-02-28 20:12:52.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:12:52.948 -08 000000018 INF: Transformed XStagePosition from 8.903931 mm to 8.9039306640625 mm.
17-02-28 20:12:52.956 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:12:52.956 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:12:52.956 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:12:52.959 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:52.959 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:12:52.959 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:52.959 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = B_1
17-02-28 20:12:52.959 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:52.960 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:52.961 -08 000000083 INF: ===================MoveEmissionFilters===================
17-02-28 20:12:52.962 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:12:52.962 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:12:52.963 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:12:52.963 -08 000000058 INF: ===================Move X,Y, Parallel===================
17-02-28 20:12:52.963 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:12:52.964 -08 000000032 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:12:52.964 -08 000000069 INF: ===================Move Y Motor without settling===================
17-02-28 20:12:52.964 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:12:52.964 -08 000000074 INF: ===================Move X Motor without settling===================
17-02-28 20:12:52.964 -08 000000038 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:12:52.964 -08 000000069 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8193 mm
17-02-28 20:12:52.964 -08 000000074 INF: X Motor: Xmit PR VM\n
17-02-28 20:12:52.965 -08 000000069 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:12:52.965 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:52.965 -08 000000089 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:12:52.965 -08 000000032 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:12:52.965 -08 000000090 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:12:52.965 -08 000000038 INF: ======================================
17-02-28 20:12:52.965 -08 000000089 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:12:52.966 -08 000000087 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:12:52.966 -08 000000089 INF: ======================================
17-02-28 20:12:52.966 -08 000000090 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:12:52.966 -08 000000100 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:12:52.966 -08 000000087 INF: ======================================
17-02-28 20:12:52.969 -08 000000100 INF: ======================================
17-02-28 20:12:52.970 -08 000000062 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:12:52.970 -08 000000037 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:12:52.970 -08 000000046 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:12:52.970 -08 000000086 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:12:52.970 -08 000000037 INF: ======================================
17-02-28 20:12:52.970 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:12:52.971 -08 000000086 INF: ======================================
17-02-28 20:12:52.971 -08 000000062 INF: ======================================
17-02-28 20:12:52.972 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:12:52.972 -08 000000081 INF: ======================================
17-02-28 20:12:52.972 -08 000000032 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:12:52.973 -08 000000046 INF: ======================================
17-02-28 20:12:52.974 -08 000000032 INF: ======================================
17-02-28 20:12:52.974 -08 000000106 INF: ======================================
17-02-28 20:12:52.974 -08 000000090 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:12:52.976 -08 000000090 INF: ======================================
17-02-28 20:12:52.977 -08 000000083 INF: ======================================
17-02-28 20:12:53.000 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:53.000 -08 000000069 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:12:53.000 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:53.000 -08 000000074 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:12:53.000 -08 000000074 INF: X Motor: Xmit PR VI\n
17-02-28 20:12:53.062 -08 000000074 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:12:53.062 -08 000000074 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:12:53.062 -08 000000074 INF: X Motor: Moving to 8.9039 mm @15.000 mm/sec, started at 6.6880 mm
17-02-28 20:12:53.062 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:53.062 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:53.062 -08 000000074 INF: X Motor: Xmit MA -20519\n
17-02-28 20:12:53.124 -08 000000074 INF: X Motor: Recv MA -20519\r\n>
17-02-28 20:12:53.124 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:53.124 -08 000000069 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:53.124 -08 000000074 INF: X Motor: WaitUntilStopped 60148
17-02-28 20:12:53.124 -08 000000069 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:12:53.124 -08 000000069 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:12:53.186 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:53.186 -08 000000069 INF: Y Motor: Start the move command
17-02-28 20:12:53.186 -08 000000069 INF: Y Motor: Xmit t 1\r
17-02-28 20:12:53.251 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:53.251 -08 000000069 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:12:53.251 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:53.376 -08 000000069 INF: Y Motor: Unshifted Position: 1066885
17-02-28 20:12:53.426 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:53.549 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:53.685 -08 000000069 INF: Y Motor: Unshifted Position: 1771103
17-02-28 20:12:53.735 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:53.752 -08 000000074 INF: X Motor: Xmit PR ER\n
17-02-28 20:12:53.811 -08 000000074 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:12:53.811 -08 000000074 INF: X Motor: Moved to 8.9048 after 686 ms
17-02-28 20:12:53.811 -08 000000074 INF: ======================================
17-02-28 20:12:53.862 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:53.997 -08 000000069 INF: Y Motor: Unshifted Position: 2551965
17-02-28 20:12:54.047 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:54.157 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2===================
17-02-28 20:12:54.158 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX)===================
17-02-28 20:12:54.172 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:54.302 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3===================
17-02-28 20:12:54.303 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:12:54.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:12:54.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:12:54.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:12:54.304 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:54.311 -08 000000069 INF: Y Motor: Unshifted Position: 3341896
17-02-28 20:12:54.361 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:54.374 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:54.374 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Selecting Reagent HB2 (8)===================
17-02-28 20:12:54.374 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:12:54.374 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-02-28 20:12:54.485 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:54.621 -08 000000069 INF: Y Motor: Unshifted Position: 4112799
17-02-28 20:12:54.671 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:54.753 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:12:54.754 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:12:54.756 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:54.807 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:54.807 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:54.815 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:12:54.907 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:12:54.935 -08 000000069 INF: Y Motor: Unshifted Position: 4897736
17-02-28 20:12:54.985 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:54.998 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:12:54.998 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:12:55.098 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:12:55.110 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:55.184 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:55.247 -08 000000069 INF: Y Motor: Unshifted Position: 5676058
17-02-28 20:12:55.284 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:55.297 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:55.370 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:55.421 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:55.557 -08 000000069 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:12:55.557 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:12:55.557 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:55.620 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:55.623 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:55.623 -08 000000069 INF: Y Motor: Moved to 64.4706 after 2371 ms
17-02-28 20:12:55.623 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:12:55.681 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:55.682 -08 000000069 INF: Y Motor: Recv v 4096\r
17-02-28 20:12:55.682 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:12:55.682 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:55.744 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:55.744 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:55.744 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:12:55.781 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:12:55.809 -08 000000069 INF: Y Motor: Recv v 402653184\r
17-02-28 20:12:55.809 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:12:55.809 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:12:55.809 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:12:55.870 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:55.871 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:55.871 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:12:55.871 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:12:55.871 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:55.933 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:55.933 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:12:55.933 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:55.970 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:55.995 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:55.995 -08 000000069 INF: ======================================
17-02-28 20:12:55.996 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:12:55.998 -08 000000058 INF: ======================================
17-02-28 20:12:55.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:56.000 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:56.000 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:12:56.000 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:12:56.056 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:56.056 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:12:56.058 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:12:56.058 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:12:56.119 -08 000000100 INF: FPGA: Recv ZFREQCL
17-02-28 20:12:56.119 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:12:56.120 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:56.120 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:12:56.156 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V1600IP18240R\r
17-02-28 20:12:56.179 -08 000000087 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:12:56.179 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:12:56.180 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:56.180 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:56.181 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:12:56.181 -08 000000069 INF: ===================Set YMotor gains for scans===================
17-02-28 20:12:56.182 -08 000000069 INF: ======================================
17-02-28 20:12:56.182 -08 000000104 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:12:56.182 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:12:56.184 -08 000000104 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:12:56.184 -08 000000104 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:12:56.185 -08 000000104 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:12:56.246 -08 000000058 INF: FPGA: Recv TDIYPOS
17-02-28 20:12:56.246 -08 000000104 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:12:56.247 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:56.248 -08 000000104 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:12:56.248 -08 000000104 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:12:56.305 -08 000000052 INF: FPGA: Recv TDIYARM2
17-02-28 20:12:56.305 -08 000000104 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:12:56.307 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:12:56.308 -08 000000104 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:12:56.308 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:12:56.310 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:12:56.311 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:12:56.311 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:12:56.338 -08 000000098 INF: RunCopyService queue size at 2/28/2017 8:12:56 PM is 2
17-02-28 20:12:56.347 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:56.432 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:56.679 -08 000000104 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:12:56.680 -08 000000104 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:12:56.680 -08 000000104 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:12:56.693 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:56.695 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:12:56.697 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:12:56.743 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:56.993 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:57.056 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:57.082 -08 000000104 INF: Camera #2 AttachBuffer (imageDataPtr = 53821386880 imgPtr = 53895782648 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:12:57.082 -08 000000104 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:12:57.082 -08 000000104 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:12:57.097 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:12:57.099 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:12:57.100 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:12:57.101 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:57.102 -08 000000104 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:12:57.102 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:57.104 -08 000000104 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:12:57.104 -08 000000104 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:12:57.104 -08 000000104 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:12:57.104 -08 000000104 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:12:57.116 -08 000000034 INF: FPGA: Recv ZYT 
17-02-28 20:12:57.116 -08 000000104 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:12:57.116 -08 000000104 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:12:57.179 -08 000000030 INF: FPGA: Recv ZARM
17-02-28 20:12:57.179 -08 000000104 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.9406 ms
17-02-28 20:12:57.179 -08 000000104 INF: Z Motor: ArmAbsStepped took 75.0034 ms
17-02-28 20:12:57.179 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:57.181 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:12:57.182 -08 000000104 INF: ======================================
17-02-28 20:12:57.183 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:57.184 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:57.184 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:57.184 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:57.185 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:57.186 -08 000000106 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:12:57.186 -08 000000106 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:12:57.186 -08 000000106 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:12:57.186 -08 000000106 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:12:57.186 -08 000000089 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:12:57.186 -08 000000106 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:12:57.187 -08 000000089 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:12:57.187 -08 000000089 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:12:57.187 -08 000000089 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:12:57.188 -08 000000089 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:12:57.306 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:57.368 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:57.553 -08 000000045 INF: FPGA: Recv EX2MV
17-02-28 20:12:57.553 -08 000000045 INF: FPGA: Recv EX1MV
17-02-28 20:12:57.553 -08 000000089 INF: Excitation Filter 1: Moved -107 steps in 366.2057 ms
17-02-28 20:12:57.553 -08 000000106 INF: Excitation Filter 2: Moved -107 steps in 366.6694 ms
17-02-28 20:12:57.553 -08 000000089 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.393 ms
17-02-28 20:12:57.553 -08 000000089 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.5425 ms
17-02-28 20:12:57.553 -08 000000106 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.8226 ms
17-02-28 20:12:57.553 -08 000000106 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.0735 ms
17-02-28 20:12:57.554 -08 000000089 INF: ======================================
17-02-28 20:12:57.554 -08 000000106 INF: ======================================
17-02-28 20:12:57.556 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:57.558 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:57.559 -08 000000069 INF: ===================Move Y Motor without settling===================
17-02-28 20:12:57.559 -08 000000039 INF: ===================Serial===================
17-02-28 20:12:57.559 -08 000000069 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:12:57.559 -08 000000076 INF: ===================Camera TDI===================
17-02-28 20:12:57.559 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:57.560 -08 000000069 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:12:57.560 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:57.560 -08 000000039 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:12:57.561 -08 000000039 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:12:57.561 -08 000000076 INF: ===================Camera TDI, Parallel===================
17-02-28 20:12:57.561 -08 000000010 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:12:57.562 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:12:57.562 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:12:57.563 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:57.564 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:57.565 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:57.565 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:57.565 -08 000000010 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:12:57.618 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:57.619 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:57.619 -08 000000069 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:12:57.619 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:57.680 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:57.681 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:57.681 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:57.714 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:57.714 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:57.715 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:57.715 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:57.742 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:57.742 -08 000000069 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:57.742 -08 000000069 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:12:57.742 -08 000000069 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:12:57.807 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:57.807 -08 000000069 INF: Y Motor: Start the move command
17-02-28 20:12:57.807 -08 000000069 INF: Y Motor: Xmit t 1\r
17-02-28 20:12:57.864 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:57.864 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:57.865 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:57.865 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:57.868 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:57.868 -08 000000069 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:12:57.868 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:57.930 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:57.991 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:57.992 -08 000000069 INF: Y Motor: Unshifted Position: 5929231
17-02-28 20:12:58.014 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:58.014 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:58.015 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:58.015 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:58.042 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:58.164 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:12:58.164 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:12:58.164 -08 000000087 INF: ===================Camera #0 Frame #1===================
17-02-28 20:12:58.165 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:12:58.165 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:12:58.165 -08 000000090 INF: ===================Camera #2 Frame #1===================
17-02-28 20:12:58.168 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:58.241 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:58.305 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:58.306 -08 000000069 INF: Y Motor: Unshifted Position: 5882532
17-02-28 20:12:58.317 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:12:58.317 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:12:58.317 -08 000000087 INF: ===================Camera #0 Frame #3===================
17-02-28 20:12:58.318 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:12:58.318 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:12:58.318 -08 000000090 INF: ===================Camera #2 Frame #3===================
17-02-28 20:12:58.356 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:58.474 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:12:58.474 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:12:58.474 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:12:58.474 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:12:58.474 -08 000000087 INF: ===================Camera #0 Frame #4===================
17-02-28 20:12:58.474 -08 000000090 INF: ===================Camera #2 Frame #4===================
17-02-28 20:12:58.481 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:58.555 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:58.615 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:58.616 -08 000000069 INF: Y Motor: Unshifted Position: 5835574
17-02-28 20:12:58.627 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:12:58.627 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:12:58.627 -08 000000087 INF: ===================Camera #0 Frame #5===================
17-02-28 20:12:58.628 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:12:58.628 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:12:58.628 -08 000000090 INF: ===================Camera #2 Frame #5===================
17-02-28 20:12:58.666 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:58.678 -08 000000062 INF: FPGA: Recv ZWAIT 
17-02-28 20:12:58.678 -08 000000062 INF: FPGA: Recv TDIYWAIT
17-02-28 20:12:58.678 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:58.678 -08 000000039 INF: ===================Serial===================
17-02-28 20:12:58.680 -08 000000039 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:12:58.680 -08 000000010 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:12:58.680 -08 000000039 INF: ===================Serial===================
17-02-28 20:12:58.681 -08 000000030 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:12:58.681 -08 000000058 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:12:58.681 -08 000000030 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:12:58.681 -08 000000030 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:12:58.681 -08 000000030 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:12:58.681 -08 000000030 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:12:58.681 -08 000000058 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:12:58.682 -08 000000058 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:12:58.682 -08 000000058 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:12:58.682 -08 000000039 INF: ======================================
17-02-28 20:12:58.683 -08 000000058 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:12:58.781 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:12:58.781 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:12:58.781 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:12:58.781 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:12:58.781 -08 000000090 INF: ===================Camera #2 Frame #6===================
17-02-28 20:12:58.781 -08 000000087 INF: ===================Camera #0 Frame #6===================
17-02-28 20:12:58.784 -08 000000090 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:12:58.785 -08 000000087 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:12:58.785 -08 000000090 INF: ===================CameraTDI Cleanup===================
17-02-28 20:12:58.787 -08 000000087 INF: ===================CameraTDI Cleanup===================
17-02-28 20:12:58.792 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:58.828 -08 000000087 INF: Camera #0 ReleaseBuffer
17-02-28 20:12:58.828 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:12:58.829 -08 000000087 INF: ======================================
17-02-28 20:12:58.841 -08 000000090 INF: Camera #2 ReleaseBuffer
17-02-28 20:12:58.841 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:12:58.842 -08 000000090 INF: ======================================
17-02-28 20:12:58.844 -08 000000076 INF: ===================Camera TDI===================
17-02-28 20:12:58.845 -08 000000076 INF: ======================================
17-02-28 20:12:58.865 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:58.929 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:58.931 -08 000000069 INF: Y Motor: Unshifted Position: 5790762
17-02-28 20:12:58.981 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:59.052 -08 000000086 INF: FPGA: Recv EX1MV
17-02-28 20:12:59.052 -08 000000086 INF: FPGA: Recv EX2MV
17-02-28 20:12:59.052 -08 000000058 INF: Excitation Filter 2: Moved 107 steps in 370.337 ms
17-02-28 20:12:59.052 -08 000000030 INF: Excitation Filter 1: Moved 107 steps in 370.5696 ms
17-02-28 20:12:59.052 -08 000000058 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.5026 ms
17-02-28 20:12:59.052 -08 000000058 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.6019 ms
17-02-28 20:12:59.052 -08 000000030 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.6939 ms
17-02-28 20:12:59.052 -08 000000030 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.879 ms
17-02-28 20:12:59.053 -08 000000058 INF: ======================================
17-02-28 20:12:59.053 -08 000000030 INF: ======================================
17-02-28 20:12:59.054 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:59.055 -08 000000010 INF: ======================================
17-02-28 20:12:59.115 -08 000000069 INF: Y Motor: Unshifted Position: 5790744
17-02-28 20:12:59.115 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:12:59.115 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:59.177 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:59.177 -08 000000069 INF: Y Motor: Moved to 62.9074 after 1309 ms
17-02-28 20:12:59.177 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:12:59.179 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:59.240 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:59.241 -08 000000069 INF: Y Motor: Recv v 4097\r
17-02-28 20:12:59.241 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:12:59.241 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:59.302 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:59.302 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:59.302 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:12:59.365 -08 000000069 INF: Y Motor: Recv v 134217728\r
17-02-28 20:12:59.365 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:12:59.365 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:12:59.365 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:12:59.429 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:59.429 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:12:59.429 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:12:59.429 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:59.490 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:59.491 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:59.491 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:12:59.491 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:59.552 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:59.554 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:59.554 -08 000000069 INF: ======================================
17-02-28 20:12:59.555 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:59.556 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:59.557 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:59.557 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:12:59.614 -08 000000076 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:12:59.615 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:12:59.676 -08 000000105 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:12:59.676 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:12:59.738 -08 000000050 INF: FPGA: Recv ZADCR 2422
17-02-28 20:12:59.738 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:12:59.738 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:12:59.801 -08 000000086 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:12:59.801 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:12:59.801 -08 000000018 INF: TDIScan finished after 6853.0331 ms
17-02-28 20:12:59.801 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:12:59.801 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:12:59.802 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:12:59.804 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:59.864 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:59.865 -08 000000095 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:12:59.866 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:59.867 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:59.868 -08 000000044 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:12:59.868 -08 000000030 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:12:59.868 -08 000000032 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:12:59.868 -08 000000044 INF: ======================================
17-02-28 20:12:59.868 -08 000000030 INF: ======================================
17-02-28 20:12:59.868 -08 000000032 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:12:59.869 -08 000000032 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:12:59.926 -08 000000032 INF: Y Motor: Recv ok\r
17-02-28 20:12:59.926 -08 000000032 INF: ======================================
17-02-28 20:12:59.927 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:59.928 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:59.929 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:12:59.989 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:59.989 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:13:00.017 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:00.017 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:13:00.044 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:00.044 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:13:00.072 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:00.072 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:13:00.073 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:13:00.074 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:13:00.081 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:13:00.082 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:13:00.082 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:13:00.114 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:00.176 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:00.426 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:00.487 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:00.737 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:00.750 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:13:00.772 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0468972597530989Best Z position at top surface = -0.118288169535349Best Z position at top surface + compensator offset = -0.0955881695353494 C:3,L:2,T
17-02-28 20:13:00.774 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.118288169535349
17-02-28 20:13:00.774 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.71318
17-02-28 20:13:00.774 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0468972597530989
17-02-28 20:13:00.774 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.3692
17-02-28 20:13:00.774 -08 000000018 INF: Z-height at LaneTopSurface is -0.118288169535349.
17-02-28 20:13:00.774 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:13:00.800 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:00.907 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:13:00.907 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:13:00.922 -08 000000062 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:00.922 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:13:00.924 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:00.924 -08 000000018 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:13:00.924 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:00.925 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:00.925 -08 000000037 INF: ===================Move Tilt Motor 1===================
17-02-28 20:13:00.926 -08 000000087 INF: ===================Move Tilt Motor 3===================
17-02-28 20:13:00.926 -08 000000037 INF: Tilt Motor 1: Moving to 5.1786 mm, started at 5.1796 mm, delta = -0.0010 mm
17-02-28 20:13:00.926 -08 000000037 INF: FPGA: Xmit T1RD\n
17-02-28 20:13:00.926 -08 000000089 INF: ===================Move Tilt Motor 2===================
17-02-28 20:13:00.926 -08 000000087 INF: Tilt Motor 3: Moving to 5.2710 mm, started at 5.2695 mm, delta = 0.0015 mm
17-02-28 20:13:00.926 -08 000000089 INF: Tilt Motor 2: Moving to 5.2431 mm, started at 5.2413 mm, delta = 0.0018 mm
17-02-28 20:13:00.927 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:13:00.929 -08 000000089 INF: FPGA: Xmit T2RD\n
17-02-28 20:13:00.987 -08 000000030 INF: FPGA: Recv T1RD 20391
17-02-28 20:13:00.987 -08 000000030 INF: FPGA: Recv T3RD 20745
17-02-28 20:13:00.987 -08 000000030 INF: FPGA: Recv T2RD 20635
17-02-28 20:13:00.987 -08 000000089 INF: Tilt Motor 2: Encoder: at motor step 3439 + 1/6
17-02-28 20:13:00.987 -08 000000089 INF: Tilt Motor 2: Moving to 20642 encoder counts
17-02-28 20:13:00.987 -08 000000037 INF: Tilt Motor 1: Encoder: at motor step 3398 + 3/6
17-02-28 20:13:00.987 -08 000000037 INF: Tilt Motor 1: Moving to 20388 encoder counts
17-02-28 20:13:00.987 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3457 + 3/6
17-02-28 20:13:00.987 -08 000000087 INF: Tilt Motor 3: Moving to 20752 encoder counts
17-02-28 20:13:00.987 -08 000000089 INF: FPGA: Xmit T2MOVETO 20642\n
17-02-28 20:13:00.990 -08 000000037 INF: FPGA: Xmit T1MOVETO 20388\n
17-02-28 20:13:00.991 -08 000000087 INF: FPGA: Xmit T3MOVETO 20752\n
17-02-28 20:13:01.050 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:01.111 -08 000000052 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:13:01.111 -08 000000052 INF: FPGA: Recv T1MOVETO 1
17-02-28 20:13:01.111 -08 000000052 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:13:01.111 -08 000000087 INF: Tilt Motor 3: To move from 5.269 to 5.271 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:13:01.111 -08 000000089 INF: Tilt Motor 2: To move from 5.241 to 5.243 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:13:01.111 -08 000000037 INF: Tilt Motor 1: To move from 5.179 to 5.179 (-0.001 mm) should take 0 steps, but required 1 steps (0.002 mm). Slippage = 0.002 mm (-1.50%)
17-02-28 20:13:01.111 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:13:01.112 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:01.112 -08 000000089 INF: FPGA: Xmit T2RD\n
17-02-28 20:13:01.114 -08 000000037 INF: FPGA: Xmit T1RD\n
17-02-28 20:13:01.173 -08 000000051 INF: FPGA: Recv T3RD 20752
17-02-28 20:13:01.173 -08 000000051 INF: FPGA: Recv T2RD 20641
17-02-28 20:13:01.173 -08 000000051 INF: FPGA: Recv T1RD 20389
17-02-28 20:13:01.173 -08 000000037 INF: Tilt Motor 1: Encoder: at motor step 3398 + 1/6
17-02-28 20:13:01.173 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:13:01.173 -08 000000037 INF: FPGA: Xmit T1RD\n
17-02-28 20:13:01.173 -08 000000089 INF: Tilt Motor 2: Encoder: at motor step 3440 + 1/6
17-02-28 20:13:01.174 -08 000000089 INF: FPGA: Xmit T2RD\n
17-02-28 20:13:01.176 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:13:01.235 -08 000000101 INF: FPGA: Recv T1RD 20389
17-02-28 20:13:01.235 -08 000000101 INF: FPGA: Recv T2RD 20641
17-02-28 20:13:01.235 -08 000000101 INF: FPGA: Recv T3RD 20752
17-02-28 20:13:01.235 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:13:01.235 -08 000000089 INF: Tilt Motor 2: Encoder: at motor step 3440 + 1/6
17-02-28 20:13:01.235 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:13:01.235 -08 000000037 INF: Tilt Motor 1: Encoder: at motor step 3398 + 1/6
17-02-28 20:13:01.236 -08 000000089 INF: FPGA: Xmit T2RD\n
17-02-28 20:13:01.238 -08 000000037 INF: FPGA: Xmit T1RD\n
17-02-28 20:13:01.299 -08 000000032 INF: FPGA: Recv T3RD 20752
17-02-28 20:13:01.299 -08 000000032 INF: FPGA: Recv T2RD 20641
17-02-28 20:13:01.299 -08 000000032 INF: FPGA: Recv T1RD 20389
17-02-28 20:13:01.299 -08 000000037 INF: Tilt Motor 1: Encoder: at motor step 3398 + 1/6
17-02-28 20:13:01.299 -08 000000037 INF: Tilt Motor 1: After move to 5.1786, error = 0.0003, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:13:01.299 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:13:01.299 -08 000000087 INF: Tilt Motor 3: After move to 5.2710, error = 0.0000, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:13:01.299 -08 000000037 INF: Tilt Motor 1: Moved to 5.1788 after 373.371 ms
17-02-28 20:13:01.299 -08 000000087 INF: Tilt Motor 3: Moved to 5.2710 after 373.3156 ms
17-02-28 20:13:01.299 -08 000000089 INF: Tilt Motor 2: Encoder: at motor step 3440 + 1/6
17-02-28 20:13:01.299 -08 000000089 INF: Tilt Motor 2: After move to 5.2431, error = -0.0003, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:13:01.299 -08 000000089 INF: Tilt Motor 2: Moved to 5.2428 after 373.3775 ms
17-02-28 20:13:01.299 -08 000000037 INF: ======================================
17-02-28 20:13:01.300 -08 000000087 INF: ======================================
17-02-28 20:13:01.300 -08 000000089 INF: ======================================
17-02-28 20:13:01.301 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:01.301 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:01.302 -08 000000018 INF: ETF Best Z: -0.09558817 mm (25057 DAC)
17-02-28 20:13:01.302 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:01.303 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:01.303 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:13:01.303 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:13:01.755 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:01.756 -08 000000098 INF: FPGA: Recv MIOCOMPF
17-02-28 20:13:01.756 -08 000000018 INF: Compensator: Moved IntoPath in 453 ms
17-02-28 20:13:01.756 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:01.758 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:01.764 -08 000000018 INF: Swath 1 position calculated to be: {X=8.349931, Y=39.70011} from estimated center X= 8.826996, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:13:01.764 -08 000000018 INF: Swath 2 position calculated to be: {X=9.457931, Y=39.70011} from estimated center X= 8.826996, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:13:01.769 -08 000000018 INF: Swath 0: Converted transform from (64.05065, -53.7112) pixels to (0.02208, -0.01863) mm.
17-02-28 20:13:01.775 -08 000000018 INF: Swath 1: Converted transform from (33.37777, -47.30994) pixels to (0.011385, -0.016215) mm.
17-02-28 20:13:01.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011===================
17-02-28 20:13:01.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011===================
17-02-28 20:13:01.776 -08 000000018 INF: Transformed XStagePosition from 8.349931 mm to 8.37201076373458 mm.
17-02-28 20:13:01.787 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4714863331765 mm.
17-02-28 20:13:01.787 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2714863331765 mm.
17-02-28 20:13:01.787 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3622363331765 mm.
17-02-28 20:13:01.790 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:01.790 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:13:01.790 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:01.790 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = B_1
17-02-28 20:13:01.796 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:01.796 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:01.797 -08 000000090 INF: ===================MoveEmissionFilters===================
17-02-28 20:13:01.797 -08 000000032 INF: ===================Move X,Y===================
17-02-28 20:13:01.797 -08 000000109 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:01.798 -08 000000039 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:01.798 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:01.798 -08 000000109 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:13:01.798 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:01.798 -08 000000032 INF: ===================Move X,Y, Parallel===================
17-02-28 20:13:01.798 -08 000000037 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:01.798 -08 000000109 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:13:01.798 -08 000000109 INF: Z Motor: Moving to -0.1156 mm, started at -0.0100 mm
17-02-28 20:13:01.798 -08 000000109 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:13:01.798 -08 000000039 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:01.799 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:01.799 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:01.799 -08 000000050 INF: ===================Move X Motor without settling===================
17-02-28 20:13:01.799 -08 000000062 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:01.799 -08 000000050 INF: X Motor: Xmit PR VM\n
17-02-28 20:13:01.799 -08 000000037 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:01.799 -08 000000034 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:13:01.799 -08 000000074 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:13:01.799 -08 000000062 INF: Y Motor: Moving to 64.4715 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:13:01.800 -08 000000095 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:13:01.800 -08 000000010 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:13:01.800 -08 000000074 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:13:01.800 -08 000000086 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:13:01.800 -08 000000038 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:13:01.800 -08 000000046 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:13:01.800 -08 000000074 INF: ======================================
17-02-28 20:13:01.800 -08 000000095 INF: ======================================
17-02-28 20:13:01.800 -08 000000106 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:13:01.800 -08 000000046 INF: ======================================
17-02-28 20:13:01.801 -08 000000106 INF: ======================================
17-02-28 20:13:01.801 -08 000000010 INF: ======================================
17-02-28 20:13:01.801 -08 000000086 INF: ======================================
17-02-28 20:13:01.802 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:01.802 -08 000000037 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:01.802 -08 000000062 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:01.803 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:01.803 -08 000000034 INF: ======================================
17-02-28 20:13:01.803 -08 000000037 INF: ======================================
17-02-28 20:13:01.803 -08 000000038 INF: ======================================
17-02-28 20:13:01.803 -08 000000087 INF: ======================================
17-02-28 20:13:01.804 -08 000000039 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:01.804 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:01.805 -08 000000039 INF: ======================================
17-02-28 20:13:01.805 -08 000000089 INF: ======================================
17-02-28 20:13:01.806 -08 000000090 INF: ======================================
17-02-28 20:13:01.815 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:01.876 -08 000000089 INF: FPGA: Recv ZTRG 
17-02-28 20:13:01.876 -08 000000109 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:13:01.878 -08 000000050 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:13:01.878 -08 000000050 INF: X Motor: Xmit PR VI\n
17-02-28 20:13:01.878 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:01.878 -08 000000062 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:01.878 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:01.939 -08 000000052 INF: FPGA: Recv ZYT 
17-02-28 20:13:01.939 -08 000000109 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:13:01.939 -08 000000109 INF: FPGA: Xmit ZMV 30300\n
17-02-28 20:13:01.940 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:01.940 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:01.942 -08 000000050 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:13:01.942 -08 000000050 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:13:01.942 -08 000000050 INF: X Motor: Moving to 8.3720 mm @15.000 mm/sec, started at 8.9048 mm
17-02-28 20:13:01.942 -08 000000050 INF: X Motor: Xmit MA -20737\n
17-02-28 20:13:02.000 -08 000000039 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:13:02.000 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:13:02.002 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:13:02.002 -08 000000062 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:02.002 -08 000000050 INF: X Motor: Recv MA -20737\r\n>
17-02-28 20:13:02.002 -08 000000062 INF: Y Motor: Set target position to 5947149 encoder counts
17-02-28 20:13:02.002 -08 000000062 INF: Y Motor: Xmit s r0xca 5947149\r
17-02-28 20:13:02.002 -08 000000050 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:13:02.061 -08 000000010 INF: FPGA: Recv ZMV 
17-02-28 20:13:02.061 -08 000000109 INF: Z Motor: MoveAndTrigger 'ZMV' command took 122.0284 ms
17-02-28 20:13:02.061 -08 000000109 INF: FPGA: Xmit ZDACR\n
17-02-28 20:13:02.063 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:02.063 -08 000000062 INF: Y Motor: Start the move command
17-02-28 20:13:02.063 -08 000000062 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:02.065 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:02.125 -08 000000038 INF: FPGA: Recv ZDACR 30300
17-02-28 20:13:02.125 -08 000000109 INF: Z Motor: MoveAndTrigger took 326.5635 ms w/comms
17-02-28 20:13:02.125 -08 000000109 INF: Z Motor: After move to -0.1156, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:13:02.125 -08 000000109 INF: Z Motor: MoveAbsStepped took 326.7387 ms
17-02-28 20:13:02.125 -08 000000109 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:02.127 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:02.127 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:02.127 -08 000000109 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:13:02.127 -08 000000062 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:13:02.127 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:02.128 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:13:02.128 -08 000000054 INF: ===================Camera Arm TDI===================
17-02-28 20:13:02.128 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:02.129 -08 000000054 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:02.129 -08 000000085 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:02.129 -08 000000054 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:02.130 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:02.130 -08 000000085 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:13:02.187 -08 000000106 INF: FPGA: Recv ZSEL 
17-02-28 20:13:02.188 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:02.188 -08 000000085 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:13:02.249 -08 000000045 INF: FPGA: Recv TDIBB
17-02-28 20:13:02.249 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:02.251 -08 000000062 INF: Y Motor: Unshifted Position: 5874658
17-02-28 20:13:02.251 -08 000000085 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:02.251 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:02.253 -08 000000085 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:13:02.253 -08 000000085 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:13:02.253 -08 000000085 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:13:02.301 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:02.313 -08 000000086 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:02.313 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:02.315 -08 000000085 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:13:02.315 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:02.317 -08 000000085 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:13:02.317 -08 000000085 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:13:02.317 -08 000000085 INF: Z Motor: Arming to move to -0.0756 mm
17-02-28 20:13:02.317 -08 000000085 INF: FPGA: Xmit ZYT 6427149 4\n
17-02-28 20:13:02.375 -08 000000044 INF: FPGA: Recv ZYT 
17-02-28 20:13:02.375 -08 000000085 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6374658 enc / 63.747 mm / ) = 6427149 enc / 64.271 mm
17-02-28 20:13:02.375 -08 000000085 INF: FPGA: Xmit ZARM 19815\n
17-02-28 20:13:02.377 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:02.427 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:02.438 -08 000000086 INF: FPGA: Recv ZARM
17-02-28 20:13:02.438 -08 000000085 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.8737 ms
17-02-28 20:13:02.438 -08 000000085 INF: Z Motor: ArmAbsStepped took 120.7929 ms
17-02-28 20:13:02.438 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:02.439 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:13:02.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:02.441 -08 000000050 INF: X Motor: Xmit PR ER\n
17-02-28 20:13:02.441 -08 000000085 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:13:02.441 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:13:02.443 -08 000000085 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:13:02.443 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:13:02.445 -08 000000085 INF: ======================================
17-02-28 20:13:02.502 -08 000000050 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:13:02.502 -08 000000050 INF: X Motor: Moved to 8.3726 after 500 ms
17-02-28 20:13:02.502 -08 000000050 INF: ======================================
17-02-28 20:13:02.563 -08 000000062 INF: Y Motor: Unshifted Position: 5947150
17-02-28 20:13:02.563 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:02.563 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:02.625 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:13:02.625 -08 000000062 INF: Y Motor: Moved to 64.4715 after 498 ms
17-02-28 20:13:02.625 -08 000000062 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:02.687 -08 000000062 INF: Y Motor: Recv v 4096\r
17-02-28 20:13:02.687 -08 000000062 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:02.687 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:02.690 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:02.750 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:02.751 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:13:02.751 -08 000000062 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:02.751 -08 000000062 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:02.813 -08 000000062 INF: Y Motor: Recv v 402653184\r
17-02-28 20:13:02.813 -08 000000062 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:13:02.813 -08 000000062 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:02.813 -08 000000062 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:02.874 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:13:02.874 -08 000000062 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:02.874 -08 000000062 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:02.874 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:02.939 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:02.939 -08 000000062 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:02.939 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:03.000 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:03.000 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:03.000 -08 000000062 INF: ======================================
17-02-28 20:13:03.001 -08 000000032 INF: ===================Move X,Y===================
17-02-28 20:13:03.002 -08 000000032 INF: ======================================
17-02-28 20:13:03.060 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:03.113 -08 000000054 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:03.114 -08 000000054 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:03.114 -08 000000054 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:03.129 -08 000000054 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:03.131 -08 000000054 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:03.310 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:03.373 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:03.623 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:03.684 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:03.934 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:03.998 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:04.189 -08 000000054 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:04.189 -08 000000054 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:04.189 -08 000000054 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:04.204 -08 000000054 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:04.206 -08 000000054 INF: ===================Camera Arm TDI===================
17-02-28 20:13:04.207 -08 000000054 INF: ======================================
17-02-28 20:13:04.208 -08 000000109 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:04.209 -08 000000109 INF: ======================================
17-02-28 20:13:04.210 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:04.211 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:04.211 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:13:04.211 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:13:04.248 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:13:04.248 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:13:04.248 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:04.307 -08 000000104 INF: FPGA: Recv ZFREQCL
17-02-28 20:13:04.307 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:13:04.307 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:04.308 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:04.308 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:04.372 -08 000000062 INF: FPGA: Recv TDIYERD 6447151
17-02-28 20:13:04.372 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447151 counts (64.472 mm)
17-02-28 20:13:04.372 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:04.373 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:04.373 -08 000000010 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:04.374 -08 000000064 INF: ===================Set YMotor gains for scans===================
17-02-28 20:13:04.374 -08 000000064 INF: ======================================
17-02-28 20:13:04.374 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:04.375 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:13:04.375 -08 000000010 INF: FPGA: Xmit TDIYPOS 6336224\n
17-02-28 20:13:04.434 -08 000000068 INF: FPGA: Recv TDIYPOS
17-02-28 20:13:04.434 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:04.436 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:13:04.436 -08 000000010 INF: FPGA: Xmit TDIYARM3 139264 6427149 1 1\n
17-02-28 20:13:04.497 -08 000000106 INF: FPGA: Recv TDIYARM3
17-02-28 20:13:04.497 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:04.498 -08 000000010 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:04.499 -08 000000010 INF: ======================================
17-02-28 20:13:04.500 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:04.501 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:04.501 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:04.502 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:04.502 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:04.503 -08 000000104 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:13:04.503 -08 000000102 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:13:04.503 -08 000000104 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:13:04.503 -08 000000104 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:13:04.503 -08 000000104 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:13:04.503 -08 000000102 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:13:04.503 -08 000000104 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:13:04.503 -08 000000102 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:13:04.503 -08 000000102 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:13:04.506 -08 000000102 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:13:04.558 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:04.622 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:04.869 -08 000000064 INF: FPGA: Recv EX2MV
17-02-28 20:13:04.869 -08 000000064 INF: FPGA: Recv EX1MV
17-02-28 20:13:04.869 -08 000000102 INF: Excitation Filter 1: Moved -107 steps in 365.7221 ms
17-02-28 20:13:04.869 -08 000000104 INF: Excitation Filter 2: Moved -107 steps in 365.9145 ms
17-02-28 20:13:04.869 -08 000000102 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.873 ms
17-02-28 20:13:04.869 -08 000000102 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.9814 ms
17-02-28 20:13:04.869 -08 000000104 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.0141 ms
17-02-28 20:13:04.869 -08 000000104 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.1928 ms
17-02-28 20:13:04.869 -08 000000102 INF: ======================================
17-02-28 20:13:04.869 -08 000000104 INF: ======================================
17-02-28 20:13:04.871 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:04.872 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:04.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:04.873 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:13:04.873 -08 000000058 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:04.873 -08 000000090 INF: ===================FPGA Z Wait===================
17-02-28 20:13:04.873 -08 000000085 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:04.873 -08 000000090 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:13:04.873 -08 000000085 INF: Y Motor: Moving to 14.8231 mm @6.500 mm/sec, started at 64.4715 mm
17-02-28 20:13:04.873 -08 000000085 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:04.873 -08 000000085 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:04.873 -08 000000045 INF: ===================Camera TDI, Parallel===================
17-02-28 20:13:04.873 -08 000000058 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:13:04.874 -08 000000058 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:13:04.874 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:13:04.874 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:13:04.876 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:04.876 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:04.878 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:04.878 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:04.934 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:04.935 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:04.935 -08 000000085 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:04.935 -08 000000085 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:04.997 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:04.997 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:05.026 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:05.026 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:05.028 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:05.028 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:05.058 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:05.058 -08 000000085 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:05.058 -08 000000085 INF: Y Motor: Set target position to 982315 encoder counts
17-02-28 20:13:05.058 -08 000000085 INF: Y Motor: Xmit s r0xca 982315\r
17-02-28 20:13:05.123 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:05.123 -08 000000085 INF: Y Motor: Start the move command
17-02-28 20:13:05.123 -08 000000085 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:05.176 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:05.176 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:05.178 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:05.178 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:05.186 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:05.186 -08 000000085 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:13:05.186 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:05.186 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:05.246 -08 000000081 INF: FPGA: Recv ZWAIT 
17-02-28 20:13:05.247 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:05.247 -08 000000090 INF: ======================================
17-02-28 20:13:05.308 -08 000000085 INF: Y Motor: Unshifted Position: 5884640
17-02-28 20:13:05.326 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:13:05.326 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:13:05.326 -08 000000010 INF: ===================Camera #0 Frame #4===================
17-02-28 20:13:05.328 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:05.328 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:05.328 -08 000000068 INF: ===================Camera #2 Frame #5===================
17-02-28 20:13:05.358 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:05.484 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:05.488 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:13:05.488 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:13:05.488 -08 000000010 INF: ===================Camera #0 Frame #10===================
17-02-28 20:13:05.494 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:13:05.494 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:13:05.494 -08 000000068 INF: ===================Camera #2 Frame #11===================
17-02-28 20:13:05.497 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:05.558 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:05.623 -08 000000085 INF: Y Motor: Unshifted Position: 5682281
17-02-28 20:13:05.657 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:13:05.657 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:13:05.657 -08 000000010 INF: ===================Camera #0 Frame #17===================
17-02-28 20:13:05.663 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:13:05.663 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:13:05.663 -08 000000068 INF: ===================Camera #2 Frame #17===================
17-02-28 20:13:05.673 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:05.796 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:05.808 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:05.828 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:13:05.828 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:13:05.828 -08 000000010 INF: ===================Camera #0 Frame #23===================
17-02-28 20:13:05.832 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:13:05.832 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:13:05.832 -08 000000068 INF: ===================Camera #2 Frame #23===================
17-02-28 20:13:05.868 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:05.933 -08 000000085 INF: Y Motor: Unshifted Position: 5480786
17-02-28 20:13:05.983 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:05.996 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:13:05.996 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:13:05.996 -08 000000010 INF: ===================Camera #0 Frame #29===================
17-02-28 20:13:06.001 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:13:06.001 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:13:06.001 -08 000000068 INF: ===================Camera #2 Frame #29===================
17-02-28 20:13:06.109 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:06.118 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:06.164 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:13:06.164 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:13:06.164 -08 000000010 INF: ===================Camera #0 Frame #35===================
17-02-28 20:13:06.170 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:13:06.170 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:13:06.170 -08 000000068 INF: ===================Camera #2 Frame #36===================
17-02-28 20:13:06.180 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:06.247 -08 000000085 INF: Y Motor: Unshifted Position: 5277764
17-02-28 20:13:06.297 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:06.334 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:13:06.334 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:13:06.334 -08 000000010 INF: ===================Camera #0 Frame #42===================
17-02-28 20:13:06.344 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:13:06.344 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:13:06.344 -08 000000068 INF: ===================Camera #2 Frame #42===================
17-02-28 20:13:06.421 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:06.431 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:06.493 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:06.505 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:13:06.505 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:13:06.505 -08 000000010 INF: ===================Camera #0 Frame #48===================
17-02-28 20:13:06.514 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:13:06.514 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:13:06.514 -08 000000068 INF: ===================Camera #2 Frame #48===================
17-02-28 20:13:06.559 -08 000000085 INF: Y Motor: Unshifted Position: 5074962
17-02-28 20:13:06.609 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:06.673 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:13:06.673 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:13:06.673 -08 000000010 INF: ===================Camera #0 Frame #54===================
17-02-28 20:13:06.684 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:13:06.684 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:13:06.684 -08 000000068 INF: ===================Camera #2 Frame #54===================
17-02-28 20:13:06.731 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:06.743 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:06.807 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:06.842 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:13:06.842 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:13:06.842 -08 000000010 INF: ===================Camera #0 Frame #60===================
17-02-28 20:13:06.854 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:13:06.854 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:13:06.854 -08 000000068 INF: ===================Camera #2 Frame #61===================
17-02-28 20:13:06.871 -08 000000085 INF: Y Motor: Unshifted Position: 4870649
17-02-28 20:13:06.921 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.011 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-02-28 20:13:07.011 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-02-28 20:13:07.011 -08 000000010 INF: ===================Camera #0 Frame #66===================
17-02-28 20:13:07.027 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:13:07.028 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:13:07.028 -08 000000068 INF: ===================Camera #2 Frame #67===================
17-02-28 20:13:07.047 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.057 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:07.119 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:07.180 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:13:07.180 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:13:07.180 -08 000000010 INF: ===================Camera #0 Frame #73===================
17-02-28 20:13:07.182 -08 000000085 INF: Y Motor: Unshifted Position: 4667627
17-02-28 20:13:07.198 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:13:07.198 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:13:07.198 -08 000000068 INF: ===================Camera #2 Frame #73===================
17-02-28 20:13:07.232 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.352 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:13:07.352 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:13:07.352 -08 000000010 INF: ===================Camera #0 Frame #79===================
17-02-28 20:13:07.355 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.368 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:13:07.368 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:13:07.368 -08 000000068 INF: ===================Camera #2 Frame #80===================
17-02-28 20:13:07.369 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:07.431 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:07.494 -08 000000085 INF: Y Motor: Unshifted Position: 4464818
17-02-28 20:13:07.521 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:13:07.521 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:13:07.521 -08 000000010 INF: ===================Camera #0 Frame #85===================
17-02-28 20:13:07.542 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:13:07.542 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:13:07.542 -08 000000068 INF: ===================Camera #2 Frame #86===================
17-02-28 20:13:07.544 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.667 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.681 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:07.689 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-02-28 20:13:07.689 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-02-28 20:13:07.689 -08 000000010 INF: ===================Camera #0 Frame #91===================
17-02-28 20:13:07.713 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:13:07.713 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:13:07.713 -08 000000068 INF: ===================Camera #2 Frame #92===================
17-02-28 20:13:07.741 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:07.806 -08 000000085 INF: Y Motor: Unshifted Position: 4263327
17-02-28 20:13:07.856 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.859 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:13:07.859 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:13:07.859 -08 000000010 INF: ===================Camera #0 Frame #98===================
17-02-28 20:13:07.884 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:13:07.884 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:13:07.884 -08 000000068 INF: ===================Camera #2 Frame #99===================
17-02-28 20:13:07.980 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.991 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:08.032 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:13:08.032 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:13:08.032 -08 000000010 INF: ===================Camera #0 Frame #104===================
17-02-28 20:13:08.053 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:08.058 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:13:08.058 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:13:08.058 -08 000000068 INF: ===================Camera #2 Frame #105===================
17-02-28 20:13:08.119 -08 000000085 INF: Y Motor: Unshifted Position: 4060301
17-02-28 20:13:08.169 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:08.202 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:13:08.202 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:13:08.202 -08 000000010 INF: ===================Camera #0 Frame #110===================
17-02-28 20:13:08.229 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:13:08.229 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:13:08.229 -08 000000068 INF: ===================Camera #2 Frame #111===================
17-02-28 20:13:08.293 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:08.303 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:08.365 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:08.372 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:13:08.372 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:13:08.372 -08 000000010 INF: ===================Camera #0 Frame #117===================
17-02-28 20:13:08.399 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:13:08.399 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:13:08.399 -08 000000068 INF: ===================Camera #2 Frame #118===================
17-02-28 20:13:08.431 -08 000000085 INF: Y Motor: Unshifted Position: 3855765
17-02-28 20:13:08.481 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:08.545 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:13:08.545 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:13:08.545 -08 000000010 INF: ===================Camera #0 Frame #123===================
17-02-28 20:13:08.573 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:13:08.573 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:13:08.573 -08 000000068 INF: ===================Camera #2 Frame #124===================
17-02-28 20:13:08.605 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:08.615 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:08.677 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:08.677 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:08.677 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:08.678 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:13:08.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:13:08.715 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:13:08.715 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:13:08.715 -08 000000010 INF: ===================Camera #0 Frame #129===================
17-02-28 20:13:08.743 -08 000000085 INF: Y Motor: Unshifted Position: 3654483
17-02-28 20:13:08.744 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:13:08.744 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:13:08.744 -08 000000068 INF: ===================Camera #2 Frame #130===================
17-02-28 20:13:08.793 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:08.885 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:13:08.885 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:13:08.885 -08 000000010 INF: ===================Camera #0 Frame #135===================
17-02-28 20:13:08.915 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:13:08.915 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:13:08.915 -08 000000068 INF: ===================Camera #2 Frame #137===================
17-02-28 20:13:08.918 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.053 -08 000000085 INF: Y Motor: Unshifted Position: 3451028
17-02-28 20:13:09.055 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:13:09.055 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:13:09.055 -08 000000010 INF: ===================Camera #0 Frame #142===================
17-02-28 20:13:09.089 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:13:09.089 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:13:09.089 -08 000000068 INF: ===================Camera #2 Frame #143===================
17-02-28 20:13:09.103 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.227 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.228 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:13:09.228 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:13:09.228 -08 000000010 INF: ===================Camera #0 Frame #148===================
17-02-28 20:13:09.260 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:13:09.260 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:13:09.260 -08 000000068 INF: ===================Camera #2 Frame #149===================
17-02-28 20:13:09.367 -08 000000085 INF: Y Motor: Unshifted Position: 3248670
17-02-28 20:13:09.397 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:13:09.397 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:13:09.397 -08 000000010 INF: ===================Camera #0 Frame #154===================
17-02-28 20:13:09.417 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.431 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:13:09.431 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:13:09.431 -08 000000068 INF: ===================Camera #2 Frame #156===================
17-02-28 20:13:09.541 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.567 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:13:09.567 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:13:09.567 -08 000000010 INF: ===================Camera #0 Frame #161===================
17-02-28 20:13:09.605 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:13:09.605 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:13:09.605 -08 000000068 INF: ===================Camera #2 Frame #162===================
17-02-28 20:13:09.677 -08 000000085 INF: Y Motor: Unshifted Position: 3045224
17-02-28 20:13:09.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:09.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:13:09.727 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.740 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:13:09.740 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:13:09.740 -08 000000010 INF: ===================Camera #0 Frame #167===================
17-02-28 20:13:09.776 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:13:09.776 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:13:09.776 -08 000000068 INF: ===================Camera #2 Frame #168===================
17-02-28 20:13:09.853 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.910 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:13:09.910 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:13:09.910 -08 000000010 INF: ===================Camera #0 Frame #173===================
17-02-28 20:13:09.947 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:13:09.947 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:13:09.947 -08 000000068 INF: ===================Camera #2 Frame #175===================
17-02-28 20:13:09.991 -08 000000085 INF: Y Motor: Unshifted Position: 2842858
17-02-28 20:13:10.041 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.080 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:13:10.080 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:13:10.080 -08 000000010 INF: ===================Camera #0 Frame #179===================
17-02-28 20:13:10.121 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:13:10.121 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:13:10.121 -08 000000068 INF: ===================Camera #2 Frame #181===================
17-02-28 20:13:10.167 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.250 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:13:10.250 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:13:10.250 -08 000000010 INF: ===================Camera #0 Frame #186===================
17-02-28 20:13:10.292 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:13:10.292 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:13:10.292 -08 000000068 INF: ===================Camera #2 Frame #187===================
17-02-28 20:13:10.303 -08 000000085 INF: Y Motor: Unshifted Position: 2638756
17-02-28 20:13:10.353 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.423 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:13:10.423 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:13:10.423 -08 000000010 INF: ===================Camera #0 Frame #192===================
17-02-28 20:13:10.463 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:13:10.463 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:13:10.463 -08 000000068 INF: ===================Camera #2 Frame #194===================
17-02-28 20:13:10.477 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.593 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:13:10.593 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:13:10.593 -08 000000010 INF: ===================Camera #0 Frame #198===================
17-02-28 20:13:10.613 -08 000000085 INF: Y Motor: Unshifted Position: 2436404
17-02-28 20:13:10.637 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:13:10.637 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:13:10.637 -08 000000068 INF: ===================Camera #2 Frame #200===================
17-02-28 20:13:10.663 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:10.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:13:10.763 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:13:10.763 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:13:10.763 -08 000000010 INF: ===================Camera #0 Frame #205===================
17-02-28 20:13:10.787 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.807 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:13:10.807 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:13:10.807 -08 000000068 INF: ===================Camera #2 Frame #206===================
17-02-28 20:13:10.924 -08 000000085 INF: Y Motor: Unshifted Position: 2234251
17-02-28 20:13:10.936 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:13:10.936 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:13:10.936 -08 000000010 INF: ===================Camera #0 Frame #211===================
17-02-28 20:13:10.974 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.978 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:13:10.978 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:13:10.978 -08 000000068 INF: ===================Camera #2 Frame #213===================
17-02-28 20:13:11.101 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:11.105 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:13:11.105 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:13:11.105 -08 000000010 INF: ===================Camera #0 Frame #217===================
17-02-28 20:13:11.152 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:13:11.152 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:13:11.152 -08 000000068 INF: ===================Camera #2 Frame #219===================
17-02-28 20:13:11.236 -08 000000085 INF: Y Motor: Unshifted Position: 2030579
17-02-28 20:13:11.275 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:13:11.275 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:13:11.275 -08 000000010 INF: ===================Camera #0 Frame #223===================
17-02-28 20:13:11.286 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:11.323 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:13:11.323 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:13:11.323 -08 000000068 INF: ===================Camera #2 Frame #225===================
17-02-28 20:13:11.413 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:11.445 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:13:11.445 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:13:11.445 -08 000000010 INF: ===================Camera #0 Frame #230===================
17-02-28 20:13:11.494 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:13:11.494 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:13:11.494 -08 000000068 INF: ===================Camera #2 Frame #232===================
17-02-28 20:13:11.549 -08 000000085 INF: Y Motor: Unshifted Position: 1827559
17-02-28 20:13:11.599 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:11.618 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:13:11.618 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:13:11.618 -08 000000010 INF: ===================Camera #0 Frame #236===================
17-02-28 20:13:11.668 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:13:11.668 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:13:11.668 -08 000000068 INF: ===================Camera #2 Frame #238===================
17-02-28 20:13:11.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:11.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:13:11.723 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:11.788 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:13:11.788 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:13:11.788 -08 000000010 INF: ===================Camera #0 Frame #242===================
17-02-28 20:13:11.839 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:13:11.839 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:13:11.839 -08 000000068 INF: ===================Camera #2 Frame #244===================
17-02-28 20:13:11.860 -08 000000085 INF: Y Motor: Unshifted Position: 1625414
17-02-28 20:13:11.910 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:11.957 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:13:11.957 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:13:11.957 -08 000000010 INF: ===================Camera #0 Frame #249===================
17-02-28 20:13:12.010 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:13:12.010 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:13:12.010 -08 000000068 INF: ===================Camera #2 Frame #251===================
17-02-28 20:13:12.037 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:12.130 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:13:12.130 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:13:12.130 -08 000000010 INF: ===================Camera #0 Frame #255===================
17-02-28 20:13:12.172 -08 000000085 INF: Y Motor: Unshifted Position: 1421737
17-02-28 20:13:12.184 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:13:12.184 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:13:12.184 -08 000000068 INF: ===================Camera #2 Frame #257===================
17-02-28 20:13:12.222 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:12.300 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:13:12.300 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:13:12.300 -08 000000010 INF: ===================Camera #0 Frame #261===================
17-02-28 20:13:12.349 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:12.355 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:13:12.355 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:13:12.355 -08 000000068 INF: ===================Camera #2 Frame #263===================
17-02-28 20:13:12.470 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:13:12.470 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:13:12.470 -08 000000010 INF: ===================Camera #0 Frame #267===================
17-02-28 20:13:12.485 -08 000000085 INF: Y Motor: Unshifted Position: 1218938
17-02-28 20:13:12.524 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:13:12.524 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:13:12.524 -08 000000068 INF: ===================Camera #2 Frame #269===================
17-02-28 20:13:12.535 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:12.607 -08 000000083 INF: FPGA: Recv TDIYWAIT
17-02-28 20:13:12.607 -08 000000058 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:12.609 -08 000000058 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:13:12.610 -08 000000095 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:13:12.610 -08 000000044 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:13:12.610 -08 000000095 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:13:12.610 -08 000000095 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:13:12.610 -08 000000095 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:13:12.610 -08 000000044 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:13:12.610 -08 000000095 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:13:12.610 -08 000000044 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:13:12.610 -08 000000044 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:13:12.611 -08 000000044 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:13:12.639 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:13:12.639 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:13:12.639 -08 000000010 INF: ===================Camera #0 Frame #272===================
17-02-28 20:13:12.654 -08 000000010 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:13:12.655 -08 000000010 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:12.659 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:12.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:12.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:13:12.796 -08 000000085 INF: Y Motor: Unshifted Position: 1016786
17-02-28 20:13:12.808 -08 000000010 INF: Camera #0 ReleaseBuffer
17-02-28 20:13:12.808 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:13:12.808 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:13:12.808 -08 000000068 INF: ===================Camera #2 Frame #272===================
17-02-28 20:13:12.808 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:13:12.817 -08 000000068 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:13:12.818 -08 000000068 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:12.839 -08 000000010 INF: ======================================
17-02-28 20:13:12.846 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:12.983 -08 000000106 INF: FPGA: Recv EX1MV
17-02-28 20:13:12.983 -08 000000106 INF: FPGA: Recv EX2MV
17-02-28 20:13:12.983 -08 000000095 INF: Excitation Filter 1: Moved 107 steps in 373.1897 ms
17-02-28 20:13:12.983 -08 000000095 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.2995 ms
17-02-28 20:13:12.983 -08 000000095 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.376 ms
17-02-28 20:13:12.983 -08 000000044 INF: Excitation Filter 2: Moved 107 steps in 373.0764 ms
17-02-28 20:13:12.983 -08 000000095 INF: ======================================
17-02-28 20:13:12.983 -08 000000044 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.5474 ms
17-02-28 20:13:12.983 -08 000000044 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.6626 ms
17-02-28 20:13:12.984 -08 000000044 INF: ======================================
17-02-28 20:13:12.985 -08 000000085 INF: Y Motor: Unshifted Position: 982316
17-02-28 20:13:12.985 -08 000000058 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:12.985 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:12.985 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:12.986 -08 000000058 INF: ======================================
17-02-28 20:13:13.019 -08 000000068 INF: Camera #2 ReleaseBuffer
17-02-28 20:13:13.019 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:13:13.047 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:13.047 -08 000000085 INF: Y Motor: Moved to 14.8232 after 7860 ms
17-02-28 20:13:13.047 -08 000000085 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:13.053 -08 000000068 INF: ======================================
17-02-28 20:13:13.055 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:13:13.056 -08 000000045 INF: ======================================
17-02-28 20:13:13.110 -08 000000085 INF: Y Motor: Recv v 4097\r
17-02-28 20:13:13.110 -08 000000085 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:13.110 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:13.171 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:13.171 -08 000000085 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:13.171 -08 000000085 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:13.233 -08 000000085 INF: Y Motor: Recv v 134217728\r
17-02-28 20:13:13.233 -08 000000085 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:13:13.233 -08 000000085 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:13.233 -08 000000085 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:13.299 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:13.299 -08 000000085 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:13.299 -08 000000085 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:13.299 -08 000000085 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:13.358 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:13.358 -08 000000085 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:13.358 -08 000000085 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:13.420 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:13.420 -08 000000085 INF: ======================================
17-02-28 20:13:13.421 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:13.422 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:13.424 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:13.424 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:13:13.483 -08 000000095 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:13:13.483 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:13.545 -08 000000068 INF: FPGA: Recv TDIYERD 1482316
17-02-28 20:13:13.545 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:13:13.609 -08 000000044 INF: FPGA: Recv ZADCR 28632
17-02-28 20:13:13.609 -08 000000018 INF: At scan end Y pos = 14.823 and Z pos = -0.110. Y moved -48.539 mm
17-02-28 20:13:13.610 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:13:13.669 -08 000000083 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:13:13.669 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:13:13.669 -08 000000018 INF: TDIScan finished after 11892.5787 ms
17-02-28 20:13:13.669 -08 000000018 INF: Image[0]: Y should trigger at 63.362 mm, 2nd row was at 64.271 mm (error = 0.909 mm)
17-02-28 20:13:13.669 -08 000000018 INF: Image[2]: Y should trigger at 63.362 mm, 2nd row was at 64.271 mm (error = 0.909 mm)
17-02-28 20:13:13.671 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:13.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:13.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:13.678 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:13:13.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:13.709 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.848 um
17-02-28 20:13:13.710 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:13.711 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:13:13.733 -08 000000030 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:13:13.734 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:13.735 -08 000000074 INF: ===================Dither Clean Up Command===================
17-02-28 20:13:13.735 -08 000000064 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:13:13.735 -08 000000058 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:13:13.735 -08 000000054 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:13:13.735 -08 000000054 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:13:13.735 -08 000000064 INF: ======================================
17-02-28 20:13:13.735 -08 000000054 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:13:13.736 -08 000000058 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:13:13.736 -08 000000058 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:13:13.736 -08 000000069 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:13:13.736 -08 000000068 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:13.737 -08 000000069 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:13:13.739 -08 000000068 INF: ===================LFT:Extracting coords===================
17-02-28 20:13:13.764 -08 000000068 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:13.765 -08 000000068 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:13:13.766 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.766 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.766 -08 000000083 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.766 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.766 -08 000000090 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:13.766 -08 000000081 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:13.766 -08 000000083 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:13.767 -08 000000105 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:13.777 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:13:13.793 -08 000000032 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:13.793 -08 000000032 INF: FPGA: Recv ZSEL 
17-02-28 20:13:13.793 -08 000000069 INF: FPGA: Xmit ZDACW 30300\n
17-02-28 20:13:13.793 -08 000000054 INF: ======================================
17-02-28 20:13:13.795 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:13.795 -08 000000058 INF: ======================================
17-02-28 20:13:13.840 -08 000000081 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:13.841 -08 000000090 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:13.841 -08 000000083 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:13.841 -08 000000105 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:13.855 -08 000000104 INF: FPGA: Recv ZDACW 
17-02-28 20:13:13.855 -08 000000069 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:13:13.856 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`18240 (0x03)\r\n(0xFF)
17-02-28 20:13:13.856 -08 000000042 INF: Current Position of Pump is: 18240
17-02-28 20:13:13.856 -08 000000069 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:13:13.921 -08 000000058 INF: FPGA: Recv TDIBB
17-02-28 20:13:13.921 -08 000000069 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:13:13.922 -08 000000069 INF: ======================================
17-02-28 20:13:13.956 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:13:13.992 -08 000000081 INF: LFT found best fwhm score 2.000004 in 151 ms
17-02-28 20:13:13.992 -08 000000081 INF: LFT found good score at index 6109 with fwhm value 2.000004. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:2,T
17-02-28 20:13:13.992 -08 000000083 INF: LFT found best fwhm score 2.000208 in 151 ms
17-02-28 20:13:13.992 -08 000000105 INF: LFT found best fwhm score 2.139231 in 151 ms
17-02-28 20:13:13.992 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.992 -08 000000105 INF: LFT found good score at index 8969 with fwhm value 2.139231. Next cycle, cycle 4 starting Z position for top surface is at -0.117 mm FC:A, C:3,L:2,T
17-02-28 20:13:13.992 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.992 -08 000000081 INF: ======================================
17-02-28 20:13:13.993 -08 000000105 INF: ======================================
17-02-28 20:13:13.993 -08 000000083 INF: LFT found good score at index 3261 with fwhm value 2.000208. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:2,T
17-02-28 20:13:13.993 -08 000000083 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.994 -08 000000083 INF: ======================================
17-02-28 20:13:13.995 -08 000000090 INF: LFT found best fwhm score 2.00018 in 151 ms
17-02-28 20:13:13.995 -08 000000090 INF: LFT found good score at index 7153 with fwhm value 2.00018. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:2,T
17-02-28 20:13:13.995 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.995 -08 000000090 INF: ======================================
17-02-28 20:13:13.997 -08 000000068 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:13.998 -08 000000068 INF: LFT weighted average best Z for top surface is at -0.118mm FC:A, C:3,L:2,T
17-02-28 20:13:13.998 -08 000000068 INF: ======================================
17-02-28 20:13:13.999 -08 000000074 INF: ======================================
17-02-28 20:13:14.000 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.001 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:13:14.001 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.001 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:13:14.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:13:14.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:13:14.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011===================
17-02-28 20:13:14.003 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011===================
17-02-28 20:13:14.003 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:13:14.004 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011===================
17-02-28 20:13:14.004 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Waiting for image analysis===================
17-02-28 20:13:14.004 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:14.029 -08 000000018 INF: Waited 26 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:13:14.029 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:14.030 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011===================
17-02-28 20:13:14.030 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.030 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011===================
17-02-28 20:13:14.030 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:13:14.031 -08 000000018 INF: Transformed XStagePosition from 9.457931 mm to 9.46931556519121 mm.
17-02-28 20:13:14.044 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4739013327062 mm.
17-02-28 20:13:14.044 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2739013327062 mm.
17-02-28 20:13:14.044 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3646513327062 mm.
17-02-28 20:13:14.047 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.048 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:13:14.048 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.048 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -115.6 um, section = B_1
17-02-28 20:13:14.050 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:14.052 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:14.085 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`18240 (0x03)\r\n(0xFF)
17-02-28 20:13:14.085 -08 000000042 INF: Current Position of Pump is: 18240
17-02-28 20:13:14.087 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:13:14.102 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":2,"Tile":1101,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF191","HCSMMF265","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.108 -08 000000064 INF: ===================MoveEmissionFilters===================
17-02-28 20:13:14.108 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:13:14.111 -08 000000037 INF: ===================Move X,Y, Parallel===================
17-02-28 20:13:14.118 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:14.119 -08 000000055 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:14.119 -08 000000074 INF: ===================Move X Motor without settling===================
17-02-28 20:13:14.119 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:13:14.119 -08 000000078 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:13:14.120 -08 000000074 INF: X Motor: Xmit PR VM\n
17-02-28 20:13:14.120 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:14.121 -08 000000055 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:14.121 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:14.122 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:13:14.122 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:14.123 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:14.124 -08 000000038 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:13:14.124 -08 000000030 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:14.125 -08 000000038 INF: ======================================
17-02-28 20:13:14.125 -08 000000030 INF: Y Motor: Moving to 64.4739 mm @25.000 mm/sec, started at 14.8232 mm
17-02-28 20:13:14.125 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:14.125 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:14.125 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:14.126 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:14.128 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:14.128 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:13:14.129 -08 000000029 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:13:14.129 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:14.129 -08 000000029 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:13:14.130 -08 000000095 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:13:14.130 -08 000000029 INF: ======================================
17-02-28 20:13:14.130 -08 000000038 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:14.130 -08 000000095 INF: ======================================
17-02-28 20:13:14.130 -08 000000050 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:13:14.130 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:14.131 -08 000000038 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:13:14.131 -08 000000050 INF: ======================================
17-02-28 20:13:14.133 -08 000000055 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:14.133 -08 000000095 INF: ===================Camera Arm TDI===================
17-02-28 20:13:14.134 -08 000000050 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:13:14.134 -08 000000029 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:13:14.134 -08 000000055 INF: ======================================
17-02-28 20:13:14.135 -08 000000029 INF: ======================================
17-02-28 20:13:14.135 -08 000000050 INF: ======================================
17-02-28 20:13:14.135 -08 000000095 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:14.136 -08 000000054 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:13:14.137 -08 000000105 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:13:14.137 -08 000000095 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:14.137 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:14.137 -08 000000054 INF: ======================================
17-02-28 20:13:14.139 -08 000000105 INF: ======================================
17-02-28 20:13:14.139 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:14.139 -08 000000010 INF: ======================================
17-02-28 20:13:14.141 -08 000000089 INF: FPGA: Recv ZSEL 
17-02-28 20:13:14.141 -08 000000085 INF: ======================================
17-02-28 20:13:14.141 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:14.142 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:14.142 -08 000000038 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:13:14.144 -08 000000087 INF: ======================================
17-02-28 20:13:14.146 -08 000000064 INF: ======================================
17-02-28 20:13:14.180 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":2,"Tile":1102,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF186","HCSMMF213","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.182 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":2,"Tile":1107,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF185","HCSMMF261","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.184 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":2,"Tile":1104,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF177","HCSMMF216","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.186 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD18240R\r
17-02-28 20:13:14.205 -08 000000029 INF: FPGA: Recv TDIBB
17-02-28 20:13:14.206 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:14.207 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:13:14.207 -08 000000074 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:13:14.207 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:14.207 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:14.207 -08 000000074 INF: X Motor: Xmit PR VI\n
17-02-28 20:13:14.207 -08 000000038 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:14.207 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:14.208 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":2,"Tile":1109,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF275","HCSMMF222","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.209 -08 000000038 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:13:14.209 -08 000000038 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:13:14.209 -08 000000038 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:13:14.211 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":2,"Tile":1105,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF256","HCSMMF199","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.213 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":2,"Tile":1110,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF285","HCSMMF179","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.222 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":2,"Tile":1103,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF206","HCSMMF238","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.224 -08 000000110 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":2,"Tile":1111,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF180","HCSMMF242","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.245 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":2,"Tile":1106,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF240","HCSMMF286","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.246 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":2,"Tile":1108,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF220","HCSMMF283","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.247 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":2,"Tile":1113,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF278","HCSMMF248","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.248 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":2,"Tile":1112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF258","HCSMMF197","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.249 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":2,"Tile":1115,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF214","HCSMMF183","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.250 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":2,"Tile":1114,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF277","HCSMMF190","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.251 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":2,"Tile":1116,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF236","HCSMMF203","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.252 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":2,"Tile":1126,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF284","HCSMMF239","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.253 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":2,"Tile":1123,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF194","HCSMMF262","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.253 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":2,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF224","HCSMMF187","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.254 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":2,"Tile":1119,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF195","HCSMMF273","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.255 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":2,"Tile":1125,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF235","HCSMMF181","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.256 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":2,"Tile":1120,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF274","HCSMMF250","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.257 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":2,"Tile":1122,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF184","HCSMMF207","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.257 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":2,"Tile":1118,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF219","HCSMMF176","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.259 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":2,"Tile":1124,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF226","HCSMMF210","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.260 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":2,"Tile":1121,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF287","HCSMMF198","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.261 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":2,"Tile":1117,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF251","HCSMMF233","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.263 -08 000000109 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:14.263 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":2,"Tile":1128,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF241","HCSMMF252","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.263 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:14.265 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:13:14.265 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:14.265 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:14.265 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.265 -08 000000074 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:13:14.265 -08 000000074 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:13:14.265 -08 000000038 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:13:14.265 -08 000000074 INF: X Motor: Moving to 9.4693 mm @15.000 mm/sec, started at 8.3726 mm
17-02-28 20:13:14.265 -08 000000074 INF: X Motor: Xmit MA -20288\n
17-02-28 20:13:14.265 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:14.267 -08 000000038 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:13:14.267 -08 000000038 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:13:14.267 -08 000000038 INF: Z Motor: Arming to move to -0.0756 mm
17-02-28 20:13:14.267 -08 000000038 INF: FPGA: Xmit ZYT 6427390 4\n
17-02-28 20:13:14.271 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:13:14.326 -08 000000085 INF: FPGA: Recv ZYT 
17-02-28 20:13:14.326 -08 000000038 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1482316 enc / 14.823 mm / ) = 6427390 enc / 64.274 mm
17-02-28 20:13:14.326 -08 000000038 INF: FPGA: Xmit ZARM 19815\n
17-02-28 20:13:14.327 -08 000000074 INF: X Motor: Recv MA -20288\r\n>
17-02-28 20:13:14.327 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:13:14.327 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:14.327 -08 000000074 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:13:14.327 -08 000000030 INF: Y Motor: Set target position to 5947390 encoder counts
17-02-28 20:13:14.327 -08 000000030 INF: Y Motor: Xmit s r0xca 5947390\r
17-02-28 20:13:14.365 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:14.375 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.375 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:13:14.387 -08 000000053 INF: FPGA: Recv ZARM
17-02-28 20:13:14.387 -08 000000038 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.0425 ms
17-02-28 20:13:14.387 -08 000000038 INF: Z Motor: ArmAbsStepped took 119.6455 ms
17-02-28 20:13:14.387 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:14.389 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:13:14.389 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:13:14.389 -08 000000030 INF: Y Motor: Start the move command
17-02-28 20:13:14.389 -08 000000030 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:14.390 -08 000000038 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:13:14.391 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:13:14.392 -08 000000038 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:13:14.392 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:13:14.394 -08 000000038 INF: ======================================
17-02-28 20:13:14.450 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:14.451 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:13:14.451 -08 000000030 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:13:14.451 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:14.463 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.469 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:13:14.575 -08 000000030 INF: Y Motor: Unshifted Position: 1063507
17-02-28 20:13:14.625 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:14.640 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.646 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:13:14.700 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:14.724 -08 000000095 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:14.725 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:14.725 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:14.740 -08 000000095 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:14.742 -08 000000095 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:14.749 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:14.763 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:14.769 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.774 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:13:14.865 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.889 -08 000000030 INF: Y Motor: Unshifted Position: 1773980
17-02-28 20:13:14.939 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:14.950 -08 000000074 INF: X Motor: Xmit PR ER\n
17-02-28 20:13:15.012 -08 000000074 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:13:15.012 -08 000000074 INF: X Motor: Moved to 9.4688 after 685 ms
17-02-28 20:13:15.012 -08 000000074 INF: ======================================
17-02-28 20:13:15.013 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:15.062 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:15.073 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:15.152 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:13:15.199 -08 000000030 INF: Y Motor: Unshifted Position: 2546488
17-02-28 20:13:15.249 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:15.323 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:15.334 -08 000000095 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:15.335 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:15.335 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:15.350 -08 000000095 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:15.352 -08 000000095 INF: ===================Camera Arm TDI===================
17-02-28 20:13:15.353 -08 000000095 INF: ======================================
17-02-28 20:13:15.354 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:15.355 -08 000000078 INF: ======================================
17-02-28 20:13:15.373 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:15.389 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:15.512 -08 000000030 INF: Y Motor: Unshifted Position: 3332282
17-02-28 20:13:15.562 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:15.639 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:15.687 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:15.697 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:15.825 -08 000000030 INF: Y Motor: Unshifted Position: 4108198
17-02-28 20:13:15.875 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:15.947 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:15.999 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:16.010 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:16.135 -08 000000030 INF: Y Motor: Unshifted Position: 4890615
17-02-28 20:13:16.185 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:16.261 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:16.311 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:16.324 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:16.450 -08 000000030 INF: Y Motor: Unshifted Position: 5667874
17-02-28 20:13:16.500 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:16.574 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:16.624 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:16.635 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:16.760 -08 000000030 INF: Y Motor: Unshifted Position: 5947392
17-02-28 20:13:16.760 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:16.760 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:16.822 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:13:16.822 -08 000000030 INF: Y Motor: Moved to 64.4739 after 2370 ms
17-02-28 20:13:16.822 -08 000000030 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:16.884 -08 000000030 INF: Y Motor: Recv v 4096\r
17-02-28 20:13:16.884 -08 000000030 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:16.884 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:16.885 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:16.948 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:16.948 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:16.948 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:13:16.951 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:13:16.951 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:16.951 -08 000000030 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:17.011 -08 000000030 INF: Y Motor: Recv v 402653184\r
17-02-28 20:13:17.011 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:13:17.011 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:17.011 -08 000000030 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:17.073 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:13:17.073 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:17.073 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:17.073 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:17.135 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:13:17.135 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:17.135 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:17.197 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:13:17.197 -08 000000030 INF: ======================================
17-02-28 20:13:17.198 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:13:17.199 -08 000000037 INF: ======================================
17-02-28 20:13:17.201 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:17.201 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:17.201 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:13:17.202 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:13:17.259 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:13:17.259 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:13:17.319 -08 000000058 INF: FPGA: Recv ZFREQCL
17-02-28 20:13:17.319 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:13:17.319 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:17.320 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:17.383 -08 000000044 INF: FPGA: Recv TDIYERD 6447392
17-02-28 20:13:17.383 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447392 counts (64.474 mm)
17-02-28 20:13:17.383 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:17.384 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:17.385 -08 000000095 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:17.385 -08 000000089 INF: ===================Set YMotor gains for scans===================
17-02-28 20:13:17.385 -08 000000089 INF: ======================================
17-02-28 20:13:17.385 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:17.386 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:13:17.386 -08 000000095 INF: FPGA: Xmit TDIYPOS 6336465\n
17-02-28 20:13:17.444 -08 000000058 INF: FPGA: Recv TDIYPOS
17-02-28 20:13:17.444 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:17.446 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:13:17.446 -08 000000095 INF: FPGA: Xmit TDIYARM3 139264 6427390 1 1\n
17-02-28 20:13:17.506 -08 000000062 INF: FPGA: Recv TDIYARM3
17-02-28 20:13:17.506 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:17.508 -08 000000095 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:17.509 -08 000000095 INF: ======================================
17-02-28 20:13:17.510 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:17.510 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:17.511 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:17.511 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:17.512 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:17.512 -08 000000046 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:13:17.513 -08 000000032 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:13:17.513 -08 000000046 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:13:17.513 -08 000000046 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:13:17.513 -08 000000032 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:13:17.513 -08 000000032 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:13:17.513 -08 000000032 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:13:17.513 -08 000000032 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:13:17.513 -08 000000046 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:13:17.514 -08 000000046 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:13:17.886 -08 000000101 INF: FPGA: Recv EX1MV
17-02-28 20:13:17.886 -08 000000101 INF: FPGA: Recv EX2MV
17-02-28 20:13:17.886 -08 000000046 INF: Excitation Filter 2: Moved -107 steps in 373.7185 ms
17-02-28 20:13:17.887 -08 000000032 INF: Excitation Filter 1: Moved -107 steps in 373.7029 ms
17-02-28 20:13:17.887 -08 000000046 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 373.8873 ms
17-02-28 20:13:17.887 -08 000000046 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 373.9961 ms
17-02-28 20:13:17.887 -08 000000032 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 373.8298 ms
17-02-28 20:13:17.887 -08 000000032 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 374.0401 ms
17-02-28 20:13:17.887 -08 000000046 INF: ======================================
17-02-28 20:13:17.887 -08 000000032 INF: ======================================
17-02-28 20:13:17.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:17.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:17.890 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:13:17.890 -08 000000087 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:17.890 -08 000000095 INF: ===================FPGA Z Wait===================
17-02-28 20:13:17.890 -08 000000085 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:17.890 -08 000000095 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:13:17.891 -08 000000085 INF: Y Motor: Moving to 14.8256 mm @6.500 mm/sec, started at 64.4739 mm
17-02-28 20:13:17.891 -08 000000085 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:17.891 -08 000000085 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:17.891 -08 000000098 INF: ===================Camera TDI, Parallel===================
17-02-28 20:13:17.891 -08 000000087 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:13:17.892 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:13:17.892 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:13:17.892 -08 000000087 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:13:17.893 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:17.893 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:17.894 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:17.894 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:17.945 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:17.945 -08 000000085 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:17.945 -08 000000085 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:18.010 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:18.010 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:18.044 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:18.044 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:18.044 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:18.044 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:18.048 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:13:18.072 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:18.072 -08 000000085 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:18.072 -08 000000085 INF: Y Motor: Set target position to 982556 encoder counts
17-02-28 20:13:18.072 -08 000000085 INF: Y Motor: Xmit s r0xca 982556\r
17-02-28 20:13:18.133 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:18.134 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:18.134 -08 000000085 INF: Y Motor: Start the move command
17-02-28 20:13:18.134 -08 000000085 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:18.194 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:18.194 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:18.194 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:18.194 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:18.196 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:18.196 -08 000000085 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:13:18.196 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:18.233 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:18.257 -08 000000057 INF: FPGA: Recv ZWAIT 
17-02-28 20:13:18.258 -08 000000095 INF: ======================================
17-02-28 20:13:18.318 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:18.319 -08 000000085 INF: Y Motor: Unshifted Position: 5883581
17-02-28 20:13:18.344 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:18.344 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:18.344 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:18.344 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:18.344 -08 000000058 INF: ===================Camera #2 Frame #5===================
17-02-28 20:13:18.344 -08 000000089 INF: ===================Camera #0 Frame #5===================
17-02-28 20:13:18.369 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:18.496 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:18.517 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:13:18.517 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:13:18.517 -08 000000089 INF: ===================Camera #0 Frame #11===================
17-02-28 20:13:18.519 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:13:18.519 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:13:18.519 -08 000000058 INF: ===================Camera #2 Frame #11===================
17-02-28 20:13:18.568 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:18.633 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:18.633 -08 000000085 INF: Y Motor: Unshifted Position: 5682088
17-02-28 20:13:18.633 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:18.633 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-02-28 20:13:18.683 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:18.690 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:13:18.690 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:13:18.690 -08 000000058 INF: ===================Camera #2 Frame #17===================
17-02-28 20:13:18.694 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:13:18.694 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:13:18.694 -08 000000089 INF: ===================Camera #0 Frame #18===================
17-02-28 20:13:18.806 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:18.862 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:13:18.862 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:13:18.862 -08 000000058 INF: ===================Camera #2 Frame #24===================
17-02-28 20:13:18.866 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:13:18.866 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:13:18.866 -08 000000089 INF: ===================Camera #0 Frame #24===================
17-02-28 20:13:18.945 -08 000000085 INF: Y Motor: Unshifted Position: 5479078
17-02-28 20:13:18.995 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:19.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.005 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.005 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:13:19.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:13:19.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°, FC temperature to 55°===================
17-02-28 20:13:19.040 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:13:19.040 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:13:19.040 -08 000000089 INF: ===================Camera #0 Frame #30===================
17-02-28 20:13:19.046 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:13:19.046 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:13:19.046 -08 000000058 INF: ===================Camera #2 Frame #31===================
17-02-28 20:13:19.119 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:19.209 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:13:19.209 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:13:19.209 -08 000000089 INF: ===================Camera #0 Frame #37===================
17-02-28 20:13:19.223 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:13:19.223 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:13:19.223 -08 000000058 INF: ===================Camera #2 Frame #37===================
17-02-28 20:13:19.255 -08 000000085 INF: Y Motor: Unshifted Position: 5277571
17-02-28 20:13:19.305 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:19.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:13:19.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:13:19.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:13:19.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:13:19.379 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.379 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.380 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.380 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:19.390 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:13:19.390 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:13:19.390 -08 000000089 INF: ===================Camera #0 Frame #43===================
17-02-28 20:13:19.401 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:13:19.401 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:13:19.401 -08 000000058 INF: ===================Camera #2 Frame #44===================
17-02-28 20:13:19.432 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:19.443 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:19.443 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Selecting Reagent HCM (7)===================
17-02-28 20:13:19.443 -08 000000042 INF: Valve B1: Go to position 7
17-02-28 20:13:19.443 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:13:19.505 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 8\r
17-02-28 20:13:19.505 -08 000000042 INF: Valve B1: 67.389 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:13:19.505 -08 000000042 INF: Valve B1: Taking shortest path 'CC' from 8 to 7
17-02-28 20:13:19.505 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CC7\r
17-02-28 20:13:19.505 -08 000000042 INF: SerialPort B1 (VICIB1): Recv  (discarded)
17-02-28 20:13:19.505 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:13:19.567 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:13:19.567 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:13:19.567 -08 000000089 INF: ===================Camera #0 Frame #50===================
17-02-28 20:13:19.568 -08 000000085 INF: Y Motor: Unshifted Position: 5073907
17-02-28 20:13:19.578 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:13:19.578 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:13:19.578 -08 000000058 INF: ===================Camera #2 Frame #50===================
17-02-28 20:13:19.618 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:19.739 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:13:19.739 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:13:19.739 -08 000000089 INF: ===================Camera #0 Frame #56===================
17-02-28 20:13:19.742 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:19.747 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:13:19.747 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:13:19.747 -08 000000058 INF: ===================Camera #2 Frame #56===================
17-02-28 20:13:19.756 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 7\r
17-02-28 20:13:19.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-02-28 20:13:19.881 -08 000000085 INF: Y Motor: Unshifted Position: 4870456
17-02-28 20:13:19.916 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:13:19.916 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:13:19.916 -08 000000089 INF: ===================Camera #0 Frame #63===================
17-02-28 20:13:19.926 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:13:19.926 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:13:19.926 -08 000000058 INF: ===================Camera #2 Frame #63===================
17-02-28 20:13:19.931 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.062 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.096 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:13:20.096 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:13:20.096 -08 000000089 INF: ===================Camera #0 Frame #69===================
17-02-28 20:13:20.109 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:13:20.109 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:13:20.109 -08 000000058 INF: ===================Camera #2 Frame #70===================
17-02-28 20:13:20.191 -08 000000085 INF: Y Motor: Unshifted Position: 4668740
17-02-28 20:13:20.241 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.265 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:13:20.265 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:13:20.265 -08 000000089 INF: ===================Camera #0 Frame #75===================
17-02-28 20:13:20.286 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:13:20.286 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:13:20.286 -08 000000058 INF: ===================Camera #2 Frame #76===================
17-02-28 20:13:20.369 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.434 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:13:20.434 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:13:20.434 -08 000000089 INF: ===================Camera #0 Frame #82===================
17-02-28 20:13:20.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:20.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:20.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:20.456 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:13:20.456 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:13:20.456 -08 000000058 INF: ===================Camera #2 Frame #82===================
17-02-28 20:13:20.504 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:20.505 -08 000000085 INF: Y Motor: Unshifted Position: 4464624
17-02-28 20:13:20.512 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 7, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 62, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:13:20.555 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.604 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:13:20.606 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:13:20.606 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:13:20.606 -08 000000089 INF: ===================Camera #0 Frame #88===================
17-02-28 20:13:20.625 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:13:20.625 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:13:20.625 -08 000000058 INF: ===================Camera #2 Frame #89===================
17-02-28 20:13:20.679 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.690 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:13:20.690 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:13:20.775 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:13:20.775 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:13:20.775 -08 000000089 INF: ===================Camera #0 Frame #94===================
17-02-28 20:13:20.790 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:13:20.797 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:13:20.797 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:13:20.797 -08 000000058 INF: ===================Camera #2 Frame #95===================
17-02-28 20:13:20.815 -08 000000085 INF: Y Motor: Unshifted Position: 4262917
17-02-28 20:13:20.865 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.879 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:20.944 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:13:20.944 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:13:20.944 -08 000000089 INF: ===================Camera #0 Frame #100===================
17-02-28 20:13:20.967 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:13:20.967 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:13:20.967 -08 000000058 INF: ===================Camera #2 Frame #101===================
17-02-28 20:13:20.979 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:20.992 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.067 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:21.112 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:13:21.112 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:13:21.112 -08 000000089 INF: ===================Camera #0 Frame #107===================
17-02-28 20:13:21.129 -08 000000085 INF: Y Motor: Unshifted Position: 4058160
17-02-28 20:13:21.137 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:13:21.137 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:13:21.137 -08 000000058 INF: ===================Camera #2 Frame #108===================
17-02-28 20:13:21.179 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.284 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:13:21.284 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:13:21.284 -08 000000089 INF: ===================Camera #0 Frame #113===================
17-02-28 20:13:21.302 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.309 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:13:21.309 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:13:21.309 -08 000000058 INF: ===================Camera #2 Frame #114===================
17-02-28 20:13:21.317 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:21.378 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:21.441 -08 000000085 INF: Y Motor: Unshifted Position: 3855792
17-02-28 20:13:21.453 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:13:21.453 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:13:21.453 -08 000000089 INF: ===================Camera #0 Frame #119===================
17-02-28 20:13:21.478 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:13:21.478 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:13:21.478 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:13:21.478 -08 000000058 INF: ===================Camera #2 Frame #120===================
17-02-28 20:13:21.491 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.564 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:21.615 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.622 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:13:21.622 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:13:21.622 -08 000000089 INF: ===================Camera #0 Frame #125===================
17-02-28 20:13:21.648 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:13:21.648 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:13:21.648 -08 000000058 INF: ===================Camera #2 Frame #126===================
17-02-28 20:13:21.664 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:21.750 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:21.750 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-02-28 20:13:21.751 -08 000000085 INF: Y Motor: Unshifted Position: 3654291
17-02-28 20:13:21.791 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:13:21.791 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:13:21.791 -08 000000089 INF: ===================Camera #0 Frame #132===================
17-02-28 20:13:21.801 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.817 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:13:21.817 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:13:21.817 -08 000000058 INF: ===================Camera #2 Frame #133===================
17-02-28 20:13:21.850 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V800IP11904R\r
17-02-28 20:13:21.926 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.940 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:21.963 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:13:21.963 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:13:21.963 -08 000000089 INF: ===================Camera #0 Frame #138===================
17-02-28 20:13:21.990 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:13:21.990 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:13:21.990 -08 000000058 INF: ===================Camera #2 Frame #139===================
17-02-28 20:13:22.040 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:22.065 -08 000000085 INF: Y Motor: Unshifted Position: 3450616
17-02-28 20:13:22.115 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:22.127 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:22.132 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:13:22.132 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:13:22.132 -08 000000089 INF: ===================Camera #0 Frame #144===================
17-02-28 20:13:22.159 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:13:22.159 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:13:22.159 -08 000000058 INF: ===================Camera #2 Frame #145===================
17-02-28 20:13:22.240 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:22.300 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:13:22.300 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:13:22.300 -08 000000089 INF: ===================Camera #0 Frame #150===================
17-02-28 20:13:22.328 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:13:22.328 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:13:22.328 -08 000000058 INF: ===================Camera #2 Frame #151===================
17-02-28 20:13:22.377 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:22.378 -08 000000085 INF: Y Motor: Unshifted Position: 3247176
17-02-28 20:13:22.428 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:22.438 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:22.470 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:13:22.470 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:13:22.471 -08 000000089 INF: ===================Camera #0 Frame #157===================
17-02-28 20:13:22.497 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:13:22.497 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:13:22.497 -08 000000058 INF: ===================Camera #2 Frame #158===================
17-02-28 20:13:22.551 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:22.642 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:13:22.642 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:13:22.642 -08 000000089 INF: ===================Camera #0 Frame #163===================
17-02-28 20:13:22.669 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:13:22.669 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:13:22.669 -08 000000058 INF: ===================Camera #2 Frame #164===================
17-02-28 20:13:22.688 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:22.690 -08 000000085 INF: Y Motor: Unshifted Position: 3044165
17-02-28 20:13:22.740 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:22.751 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:22.811 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:13:22.811 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:13:22.811 -08 000000089 INF: ===================Camera #0 Frame #169===================
17-02-28 20:13:22.838 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:13:22.838 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:13:22.838 -08 000000058 INF: ===================Camera #2 Frame #170===================
17-02-28 20:13:22.864 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:22.979 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:13:22.979 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:13:22.979 -08 000000089 INF: ===================Camera #0 Frame #175===================
17-02-28 20:13:23.000 -08 000000085 INF: Y Motor: Unshifted Position: 2841366
17-02-28 20:13:23.001 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:23.007 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:13:23.007 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:13:23.007 -08 000000058 INF: ===================Camera #2 Frame #176===================
17-02-28 20:13:23.050 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.061 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:23.147 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:13:23.147 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:13:23.147 -08 000000089 INF: ===================Camera #0 Frame #182===================
17-02-28 20:13:23.174 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.176 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:13:23.176 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:13:23.176 -08 000000058 INF: ===================Camera #2 Frame #183===================
17-02-28 20:13:23.311 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:23.311 -08 000000085 INF: Y Motor: Unshifted Position: 2637694
17-02-28 20:13:23.318 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:13:23.318 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:13:23.318 -08 000000089 INF: ===================Camera #0 Frame #188===================
17-02-28 20:13:23.348 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:13:23.348 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:13:23.348 -08 000000058 INF: ===================Camera #2 Frame #189===================
17-02-28 20:13:23.361 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.375 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:23.486 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:13:23.486 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:13:23.486 -08 000000089 INF: ===================Camera #0 Frame #194===================
17-02-28 20:13:23.487 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.517 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:13:23.517 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:13:23.517 -08 000000058 INF: ===================Camera #2 Frame #195===================
17-02-28 20:13:23.625 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:23.625 -08 000000085 INF: Y Motor: Unshifted Position: 2436642
17-02-28 20:13:23.654 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:13:23.654 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:13:23.654 -08 000000089 INF: ===================Camera #0 Frame #200===================
17-02-28 20:13:23.675 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.686 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:23.686 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:13:23.686 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:13:23.686 -08 000000058 INF: ===================Camera #2 Frame #201===================
17-02-28 20:13:23.800 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.822 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:13:23.822 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:13:23.822 -08 000000089 INF: ===================Camera #0 Frame #206===================
17-02-28 20:13:23.855 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:13:23.855 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:13:23.855 -08 000000058 INF: ===================Camera #2 Frame #208===================
17-02-28 20:13:23.936 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:23.937 -08 000000085 INF: Y Motor: Unshifted Position: 2232540
17-02-28 20:13:23.987 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.990 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:13:23.990 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:13:23.990 -08 000000089 INF: ===================Camera #0 Frame #213===================
17-02-28 20:13:23.998 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:24.027 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:13:24.027 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:13:24.027 -08 000000058 INF: ===================Camera #2 Frame #214===================
17-02-28 20:13:24.110 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:24.161 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:13:24.161 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:13:24.161 -08 000000089 INF: ===================Camera #0 Frame #219===================
17-02-28 20:13:24.196 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:13:24.196 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:13:24.196 -08 000000058 INF: ===================Camera #2 Frame #220===================
17-02-28 20:13:24.248 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:24.248 -08 000000085 INF: Y Motor: Unshifted Position: 2030173
17-02-28 20:13:24.298 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:24.311 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:24.329 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:13:24.329 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:13:24.329 -08 000000089 INF: ===================Camera #0 Frame #225===================
17-02-28 20:13:24.365 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:13:24.365 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:13:24.365 -08 000000058 INF: ===================Camera #2 Frame #226===================
17-02-28 20:13:24.422 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:24.497 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:13:24.497 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:13:24.497 -08 000000089 INF: ===================Camera #0 Frame #231===================
17-02-28 20:13:24.535 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:13:24.535 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:13:24.535 -08 000000058 INF: ===================Camera #2 Frame #233===================
17-02-28 20:13:24.561 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:24.561 -08 000000085 INF: Y Motor: Unshifted Position: 1826718
17-02-28 20:13:24.611 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:24.622 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:24.665 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:13:24.665 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:13:24.665 -08 000000089 INF: ===================Camera #0 Frame #237===================
17-02-28 20:13:24.707 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:13:24.707 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:13:24.707 -08 000000058 INF: ===================Camera #2 Frame #239===================
17-02-28 20:13:24.735 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:24.833 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:13:24.833 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:13:24.833 -08 000000089 INF: ===================Camera #0 Frame #244===================
17-02-28 20:13:24.872 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:24.873 -08 000000085 INF: Y Motor: Unshifted Position: 1623921
17-02-28 20:13:24.876 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:13:24.876 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:13:24.876 -08 000000058 INF: ===================Camera #2 Frame #245===================
17-02-28 20:13:24.923 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:24.935 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:25.004 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:13:25.004 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:13:25.004 -08 000000089 INF: ===================Camera #0 Frame #250===================
17-02-28 20:13:25.045 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:13:25.045 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:13:25.045 -08 000000058 INF: ===================Camera #2 Frame #251===================
17-02-28 20:13:25.048 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:25.172 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:13:25.172 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:13:25.172 -08 000000089 INF: ===================Camera #0 Frame #256===================
17-02-28 20:13:25.184 -08 000000085 INF: Y Motor: Unshifted Position: 1421548
17-02-28 20:13:25.185 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:25.214 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:13:25.214 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:13:25.214 -08 000000058 INF: ===================Camera #2 Frame #258===================
17-02-28 20:13:25.234 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:25.246 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:25.340 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:13:25.340 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:13:25.340 -08 000000089 INF: ===================Camera #0 Frame #262===================
17-02-28 20:13:25.358 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:25.386 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:13:25.386 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:13:25.386 -08 000000058 INF: ===================Camera #2 Frame #264===================
17-02-28 20:13:25.496 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:25.496 -08 000000085 INF: Y Motor: Unshifted Position: 1218526
17-02-28 20:13:25.510 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:13:25.510 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:13:25.510 -08 000000089 INF: ===================Camera #0 Frame #269===================
17-02-28 20:13:25.546 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:25.557 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:13:25.557 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:13:25.557 -08 000000058 INF: ===================Camera #2 Frame #270===================
17-02-28 20:13:25.559 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:25.619 -08 000000109 INF: FPGA: Recv TDIYWAIT
17-02-28 20:13:25.619 -08 000000087 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:25.621 -08 000000087 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:13:25.622 -08 000000064 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:13:25.622 -08 000000076 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:13:25.622 -08 000000064 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:13:25.622 -08 000000064 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:13:25.622 -08 000000064 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:13:25.622 -08 000000064 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:13:25.622 -08 000000076 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:13:25.622 -08 000000076 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:13:25.622 -08 000000076 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:13:25.625 -08 000000076 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:13:25.671 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:25.683 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:13:25.683 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:13:25.683 -08 000000089 INF: ===================Camera #0 Frame #272===================
17-02-28 20:13:25.693 -08 000000089 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:13:25.694 -08 000000089 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:25.809 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:25.809 -08 000000085 INF: Y Motor: Unshifted Position: 1016383
17-02-28 20:13:25.827 -08 000000089 INF: Camera #0 ReleaseBuffer
17-02-28 20:13:25.827 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:13:25.827 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:13:25.827 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:13:25.827 -08 000000058 INF: ===================Camera #2 Frame #272===================
17-02-28 20:13:25.834 -08 000000058 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:13:25.835 -08 000000058 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:25.858 -08 000000089 INF: ======================================
17-02-28 20:13:25.859 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:25.870 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:25.994 -08 000000054 INF: FPGA: Recv EX1MV
17-02-28 20:13:25.994 -08 000000054 INF: FPGA: Recv EX2MV
17-02-28 20:13:25.994 -08 000000076 INF: Excitation Filter 2: Moved 107 steps in 371.7105 ms
17-02-28 20:13:25.994 -08 000000064 INF: Excitation Filter 1: Moved 107 steps in 371.8812 ms
17-02-28 20:13:25.994 -08 000000076 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8253 ms
17-02-28 20:13:25.994 -08 000000076 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.9401 ms
17-02-28 20:13:25.994 -08 000000064 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.02 ms
17-02-28 20:13:25.994 -08 000000064 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.1986 ms
17-02-28 20:13:25.994 -08 000000076 INF: ======================================
17-02-28 20:13:25.994 -08 000000064 INF: ======================================
17-02-28 20:13:25.996 -08 000000085 INF: Y Motor: Unshifted Position: 982557
17-02-28 20:13:25.996 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:25.996 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:25.996 -08 000000087 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:25.997 -08 000000087 INF: ======================================
17-02-28 20:13:26.004 -08 000000058 INF: Camera #2 ReleaseBuffer
17-02-28 20:13:26.004 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:13:26.039 -08 000000058 INF: ======================================
17-02-28 20:13:26.040 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:13:26.041 -08 000000098 INF: ======================================
17-02-28 20:13:26.059 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:26.059 -08 000000085 INF: Y Motor: Moved to 14.8256 after 7863 ms
17-02-28 20:13:26.059 -08 000000085 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:26.120 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:26.122 -08 000000085 INF: Y Motor: Recv v 4097\r
17-02-28 20:13:26.122 -08 000000085 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:26.122 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:26.182 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:26.183 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:26.183 -08 000000085 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:26.183 -08 000000085 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:26.245 -08 000000085 INF: Y Motor: Recv v 134217728\r
17-02-28 20:13:26.245 -08 000000085 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:13:26.245 -08 000000085 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:26.245 -08 000000085 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:26.307 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:26.307 -08 000000085 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:26.307 -08 000000085 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:26.307 -08 000000085 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:26.355 -08 000000051 INF: RunCopyService queue size at 2/28/2017 8:13:26 PM is 2
17-02-28 20:13:26.372 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:26.372 -08 000000085 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:26.372 -08 000000085 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:26.448 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:26.451 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:26.451 -08 000000085 INF: ======================================
17-02-28 20:13:26.453 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:26.454 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:26.455 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:26.455 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:13:26.510 -08 000000074 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:13:26.510 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:26.513 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:26.573 -08 000000047 INF: FPGA: Recv TDIYERD 1482557
17-02-28 20:13:26.574 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:13:26.636 -08 000000102 INF: FPGA: Recv ZADCR 29177
17-02-28 20:13:26.636 -08 000000018 INF: At scan end Y pos = 14.826 and Z pos = -0.112. Y moved -48.539 mm
17-02-28 20:13:26.636 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:13:26.695 -08 000000032 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:13:26.695 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:13:26.695 -08 000000018 INF: TDIScan finished after 12662.9557 ms
17-02-28 20:13:26.695 -08 000000018 INF: Image[0]: Y should trigger at 63.365 mm, 2nd row was at 64.274 mm (error = 0.909 mm)
17-02-28 20:13:26.695 -08 000000018 INF: Image[2]: Y should trigger at 63.365 mm, 2nd row was at 64.274 mm (error = 0.909 mm)
17-02-28 20:13:26.697 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:26.731 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.890 um
17-02-28 20:13:26.731 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:26.732 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:13:26.760 -08 000000034 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:13:26.761 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:26.761 -08 000000098 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:13:26.761 -08 000000055 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:13:26.761 -08 000000076 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:13:26.762 -08 000000047 INF: ===================Dither Clean Up Command===================
17-02-28 20:13:26.762 -08 000000055 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:13:26.762 -08 000000055 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:13:26.762 -08 000000098 INF: ======================================
17-02-28 20:13:26.762 -08 000000076 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:13:26.762 -08 000000076 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:13:26.762 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:13:26.762 -08 000000057 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:26.763 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:26.763 -08 000000058 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:13:26.766 -08 000000057 INF: ===================LFT:Extracting coords===================
17-02-28 20:13:26.791 -08 000000057 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:26.791 -08 000000057 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:13:26.792 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:13:26.792 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:13:26.792 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:13:26.792 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:13:26.792 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:26.793 -08 000000046 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:26.793 -08 000000066 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:26.793 -08 000000050 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:26.822 -08 000000104 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:26.822 -08 000000104 INF: FPGA: Recv ZSEL 
17-02-28 20:13:26.822 -08 000000058 INF: FPGA: Xmit ZDACW 30300\n
17-02-28 20:13:26.822 -08 000000076 INF: ======================================
17-02-28 20:13:26.823 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:26.824 -08 000000055 INF: Y Motor: Recv ok\r
17-02-28 20:13:26.824 -08 000000055 INF: ======================================
17-02-28 20:13:26.867 -08 000000032 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:26.867 -08 000000046 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:26.867 -08 000000050 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:26.868 -08 000000066 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:26.885 -08 000000102 INF: FPGA: Recv ZDACW 
17-02-28 20:13:26.885 -08 000000058 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:13:26.886 -08 000000058 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:13:26.946 -08 000000062 INF: FPGA: Recv TDIBB
17-02-28 20:13:26.946 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:13:26.947 -08 000000058 INF: ======================================
17-02-28 20:13:27.018 -08 000000046 INF: LFT found best fwhm score 2.000585 in 151 ms
17-02-28 20:13:27.018 -08 000000032 INF: LFT found best fwhm score 2.000048 in 151 ms
17-02-28 20:13:27.018 -08 000000032 INF: LFT found good score at index 7345 with fwhm value 2.000048. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:2,T
17-02-28 20:13:27.018 -08 000000050 INF: LFT found best fwhm score 2.000367 in 151 ms
17-02-28 20:13:27.019 -08 000000050 INF: LFT found good score at index 6325 with fwhm value 2.000367. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:2,T
17-02-28 20:13:27.019 -08 000000046 INF: LFT found good score at index 189 with fwhm value 2.000585. Next cycle, cycle 4 starting Z position for top surface is at -0.119 mm FC:A, C:3,L:2,T
17-02-28 20:13:27.019 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:13:27.019 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:13:27.019 -08 000000066 INF: LFT found best fwhm score 2.272618 in 151 ms
17-02-28 20:13:27.019 -08 000000066 INF: LFT found good score at index 3013 with fwhm value 2.272618. Next cycle, cycle 4 starting Z position for top surface is at -0.119 mm FC:A, C:3,L:2,T
17-02-28 20:13:27.019 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:13:27.019 -08 000000032 INF: ======================================
17-02-28 20:13:27.019 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:13:27.019 -08 000000050 INF: ======================================
17-02-28 20:13:27.019 -08 000000046 INF: ======================================
17-02-28 20:13:27.019 -08 000000066 INF: ======================================
17-02-28 20:13:27.020 -08 000000057 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:27.021 -08 000000057 INF: LFT weighted average best Z for top surface is at -0.118mm FC:A, C:3,L:2,T
17-02-28 20:13:27.021 -08 000000057 INF: ======================================
17-02-28 20:13:27.023 -08 000000047 INF: ======================================
17-02-28 20:13:27.024 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:27.024 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:27.026 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011===================
17-02-28 20:13:27.026 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011===================
17-02-28 20:13:27.027 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:13:27.027 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011===================
17-02-28 20:13:27.027 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:13:27.027 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-02-28 20:13:27.050 -08 000000018 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:13:27.050 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:27.050 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:27.050 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.051 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:13:27.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:27.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:13:27.068 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.069 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.069 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:13:27.069 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:13:27.120 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":2,"Tile":1207,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF219","HCSMMF237","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.140 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:27.159 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:13:27.160 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.161 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:13:27.161 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:13:27.199 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:27.246 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":2,"Tile":1202,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF205","HCSMMF282","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.247 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":2,"Tile":1209,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF190","HCSMMF277","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.248 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":2,"Tile":1206,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF232","HCSMMF275","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.250 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":2,"Tile":1216,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF248","HCSMMF178","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.251 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":2,"Tile":1205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF251","HCSMMF258","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.252 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":2,"Tile":1215,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF284","HCSMMF221","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.253 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":2,"Tile":1204,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF279","HCSMMF269","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.253 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":2,"Tile":1201,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF287","HCSMMF210","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.254 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":2,"Tile":1213,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF247","HCSMMF220","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.255 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":2,"Tile":1218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF260","HCSMMF187","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.256 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":2,"Tile":1212,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF200","HCSMMF229","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.257 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":2,"Tile":1217,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF256","HCSMMF201","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.257 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":2,"Tile":1222,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF215","HCSMMF257","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.258 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":2,"Tile":1203,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF253","HCSMMF245","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.259 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":2,"Tile":1210,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF216","HCSMMF177","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.259 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":2,"Tile":1214,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF230","HCSMMF280","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.260 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":2,"Tile":1211,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF231","HCSMMF212","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.261 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":2,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF218","HCSMMF207","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.262 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":2,"Tile":1225,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF182","HCSMMF185","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.263 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":2,"Tile":1228,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF186","HCSMMF268","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.263 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":2,"Tile":1221,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF183","HCSMMF276","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.264 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":2,"Tile":1224,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF259","HCSMMF255","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.266 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":2,"Tile":1223,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF271","HCSMMF270","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.266 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":2,"Tile":1208,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF209","HCSMMF265","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.268 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":2,"Tile":1227,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF285","HCSMMF196","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.269 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":2,"Tile":1219,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF195","HCSMMF261","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.271 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":2,"Tile":1220,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF199","HCSMMF242","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.273 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.279 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:13:27.366 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.366 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:13:27.403 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.409 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:13:27.450 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:27.507 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:27.511 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.517 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:13:27.555 -08 000000062 INF: FPGA: Recv MIOCOMPR
17-02-28 20:13:27.555 -08 000000018 INF: Compensator: Moved OutOfPath in 394 ms
17-02-28 20:13:27.555 -08 000000018 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:13:27.556 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.556 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.557 -08 000000109 INF: ===================Move Tilt Motor 2===================
17-02-28 20:13:27.557 -08 000000104 INF: ===================Move Tilt Motor 3===================
17-02-28 20:13:27.557 -08 000000052 INF: ===================Move Tilt Motor 1===================
17-02-28 20:13:27.557 -08 000000109 INF: ======================================
17-02-28 20:13:27.557 -08 000000052 INF: ======================================
17-02-28 20:13:27.558 -08 000000104 INF: ======================================
17-02-28 20:13:27.558 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.559 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.566 -08 000000018 INF: Transformed XStagePosition from 11.66893 mm to 11.6689300537109 mm.
17-02-28 20:13:27.575 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:13:27.575 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:13:27.575 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:13:27.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:27.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:27.580 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:13:27.580 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:13:27.580 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:13:27.609 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.615 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:13:27.618 -08 000000050 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:27.618 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:27.619 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:13:27.619 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1156 mm
17-02-28 20:13:27.619 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:13:27.679 -08 000000110 INF: FPGA: Recv ZTRG 
17-02-28 20:13:27.679 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:13:27.710 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.740 -08 000000032 INF: FPGA: Recv ZYT 
17-02-28 20:13:27.740 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:13:27.740 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:13:27.757 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:27.804 -08 000000095 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:13:27.804 -08 000000095 INF: FPGA: Recv ZMV 
17-02-28 20:13:27.804 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 64.066 ms
17-02-28 20:13:27.804 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:13:27.804 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:13:27.820 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:27.867 -08 000000057 INF: FPGA: Recv ZDACR 60292
17-02-28 20:13:27.867 -08 000000018 INF: Z Motor: MoveAndTrigger took 248.3826 ms w/comms
17-02-28 20:13:27.867 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:13:27.867 -08 000000018 INF: Z Motor: MoveAbsStepped took 248.6066 ms
17-02-28 20:13:27.868 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:27.868 -08 000000018 INF: Transformed XStagePosition from 11.66893 mm to 11.6689300537109 mm.
17-02-28 20:13:27.877 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:13:27.877 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:13:27.877 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:13:27.877 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:13:27.877 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:13:27.928 -08 000000044 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:27.938 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:27.939 -08 000000018 INF: Transformed XStagePosition from 11.66893 mm to 11.6689300537109 mm.
17-02-28 20:13:27.947 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:13:27.947 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:13:27.947 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:13:27.949 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:27.949 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:13:27.950 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:27.950 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = C_1
17-02-28 20:13:27.950 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:27.951 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:27.951 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:13:27.951 -08 000000100 INF: ===================MoveEmissionFilters===================
17-02-28 20:13:27.952 -08 000000058 INF: ===================Move X,Y, Parallel===================
17-02-28 20:13:27.952 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:27.952 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:27.952 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:27.953 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:27.953 -08 000000066 INF: ===================Move X Motor without settling===================
17-02-28 20:13:27.953 -08 000000076 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:27.953 -08 000000066 INF: X Motor: Xmit PR VM\n
17-02-28 20:13:27.953 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:27.953 -08 000000076 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8256 mm
17-02-28 20:13:27.953 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:27.953 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:27.953 -08 000000076 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:27.953 -08 000000076 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:27.953 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:27.954 -08 000000057 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:13:27.954 -08 000000101 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:13:27.954 -08 000000106 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:13:27.954 -08 000000029 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:13:27.954 -08 000000104 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:13:27.954 -08 000000062 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:13:27.954 -08 000000034 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:13:27.955 -08 000000057 INF: ======================================
17-02-28 20:13:27.955 -08 000000085 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:13:27.955 -08 000000034 INF: ======================================
17-02-28 20:13:27.955 -08 000000085 INF: ======================================
17-02-28 20:13:27.955 -08 000000101 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:13:27.956 -08 000000106 INF: ======================================
17-02-28 20:13:27.956 -08 000000104 INF: ======================================
17-02-28 20:13:27.956 -08 000000101 INF: ======================================
17-02-28 20:13:27.956 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:27.957 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:27.958 -08 000000029 INF: ======================================
17-02-28 20:13:27.958 -08 000000098 INF: ======================================
17-02-28 20:13:27.958 -08 000000062 INF: ======================================
17-02-28 20:13:27.959 -08 000000052 INF: ======================================
17-02-28 20:13:27.959 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:27.959 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:27.960 -08 000000032 INF: ======================================
17-02-28 20:13:27.960 -08 000000109 INF: ======================================
17-02-28 20:13:27.962 -08 000000100 INF: ======================================
17-02-28 20:13:27.995 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:13:27.995 -08 000000076 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:27.995 -08 000000076 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:27.995 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:13:28.009 -08 000000066 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:13:28.009 -08 000000066 INF: X Motor: Xmit PR VI\n
17-02-28 20:13:28.055 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:13:28.055 -08 000000076 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:28.070 -08 000000066 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:13:28.070 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:28.070 -08 000000066 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:13:28.070 -08 000000066 INF: X Motor: Moving to 11.6689 mm @15.000 mm/sec, started at 9.4688 mm
17-02-28 20:13:28.070 -08 000000066 INF: X Motor: Xmit MA -19387\n
17-02-28 20:13:28.119 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:13:28.119 -08 000000076 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:28.119 -08 000000076 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:13:28.119 -08 000000076 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:13:28.133 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:28.134 -08 000000066 INF: X Motor: Recv MA -19387\r\n>
17-02-28 20:13:28.134 -08 000000066 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:13:28.179 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:13:28.179 -08 000000076 INF: Y Motor: Start the move command
17-02-28 20:13:28.179 -08 000000076 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:28.243 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:13:28.243 -08 000000076 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:13:28.243 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:28.368 -08 000000076 INF: Y Motor: Unshifted Position: 1064947
17-02-28 20:13:28.383 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:28.418 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:28.445 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:28.541 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:28.680 -08 000000076 INF: Y Motor: Unshifted Position: 1771725
17-02-28 20:13:28.695 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:28.730 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:28.755 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:28.756 -08 000000066 INF: X Motor: Xmit PR ER\n
17-02-28 20:13:28.820 -08 000000066 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:13:28.820 -08 000000066 INF: X Motor: Moved to 11.6685 after 686 ms
17-02-28 20:13:28.820 -08 000000066 INF: ======================================
17-02-28 20:13:28.854 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:28.990 -08 000000076 INF: Y Motor: Unshifted Position: 2560079
17-02-28 20:13:29.005 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:29.040 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:29.068 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:29.167 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:29.303 -08 000000076 INF: Y Motor: Unshifted Position: 3337517
17-02-28 20:13:29.318 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:29.353 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:29.381 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:29.479 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:29.615 -08 000000076 INF: Y Motor: Unshifted Position: 4117590
17-02-28 20:13:29.631 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:29.665 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:29.693 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:29.789 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:29.928 -08 000000076 INF: Y Motor: Unshifted Position: 4893367
17-02-28 20:13:29.943 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:29.978 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:30.003 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:30.102 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:30.238 -08 000000076 INF: Y Motor: Unshifted Position: 5674307
17-02-28 20:13:30.253 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:30.288 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:30.316 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:30.415 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:30.550 -08 000000076 INF: Y Motor: Unshifted Position: 5947055
17-02-28 20:13:30.550 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:30.550 -08 000000076 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:30.566 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:30.615 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:13:30.615 -08 000000076 INF: Y Motor: Moved to 64.4706 after 2372 ms
17-02-28 20:13:30.615 -08 000000076 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:30.628 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:30.677 -08 000000076 INF: Y Motor: Recv v 4096\r
17-02-28 20:13:30.677 -08 000000076 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:30.677 -08 000000076 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:30.738 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:13:30.738 -08 000000076 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:30.738 -08 000000076 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:30.802 -08 000000076 INF: Y Motor: Recv v 402653184\r
17-02-28 20:13:30.802 -08 000000076 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:13:30.802 -08 000000076 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:30.802 -08 000000076 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:30.863 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:13:30.863 -08 000000076 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:30.863 -08 000000076 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:30.863 -08 000000076 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:30.878 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:30.926 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:13:30.926 -08 000000076 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:30.926 -08 000000076 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:30.941 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:30.987 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:13:30.987 -08 000000076 INF: ======================================
17-02-28 20:13:30.988 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:13:30.990 -08 000000058 INF: ======================================
17-02-28 20:13:30.991 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:30.991 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:30.992 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:13:30.992 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:13:31.051 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:13:31.051 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:13:31.110 -08 000000034 INF: FPGA: Recv ZFREQCL
17-02-28 20:13:31.111 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:13:31.111 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:31.111 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:31.174 -08 000000081 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:13:31.174 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:13:31.175 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:31.175 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:31.176 -08 000000053 INF: ===================Set YMotor gains for scans===================
17-02-28 20:13:31.176 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:13:31.177 -08 000000053 INF: ======================================
17-02-28 20:13:31.178 -08 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:13:31.178 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:13:31.180 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:13:31.181 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:13:31.182 -08 000000089 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:13:31.191 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:31.235 -08 000000038 INF: FPGA: Recv TDIYPOS
17-02-28 20:13:31.235 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:13:31.238 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:13:31.238 -08 000000089 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:13:31.251 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:31.298 -08 000000069 INF: FPGA: Recv TDIYARM2
17-02-28 20:13:31.299 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:13:31.301 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:13:31.303 -08 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:13:31.303 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:13:31.306 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:13:31.307 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:13:31.308 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:31.501 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:31.563 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:31.680 -08 000000089 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:13:31.680 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:13:31.680 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:31.695 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:13:31.697 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:31.813 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:31.878 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:32.085 -08 000000089 INF: Camera #2 AttachBuffer (imageDataPtr = 53821386880 imgPtr = 53895782648 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:13:32.085 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:13:32.085 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:32.100 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:13:32.102 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:13:32.103 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:13:32.105 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:32.106 -08 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:13:32.106 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:32.108 -08 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:13:32.108 -08 000000089 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:13:32.108 -08 000000089 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:13:32.108 -08 000000089 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:13:32.128 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:32.172 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:13:32.172 -08 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:13:32.172 -08 000000089 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:13:32.188 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:32.233 -08 000000087 INF: FPGA: Recv ZARM
17-02-28 20:13:32.233 -08 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.0451 ms
17-02-28 20:13:32.233 -08 000000089 INF: Z Motor: ArmAbsStepped took 124.6412 ms
17-02-28 20:13:32.233 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:32.235 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:13:32.236 -08 000000089 INF: ======================================
17-02-28 20:13:32.237 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:32.239 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:32.239 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:32.240 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:32.241 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:32.242 -08 000000038 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:13:32.242 -08 000000064 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:13:32.242 -08 000000038 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:13:32.242 -08 000000038 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:13:32.242 -08 000000038 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:13:32.242 -08 000000038 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:13:32.242 -08 000000064 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:13:32.242 -08 000000064 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:13:32.242 -08 000000064 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:13:32.243 -08 000000064 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:13:32.438 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:32.501 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:32.610 -08 000000066 INF: FPGA: Recv EX2MV
17-02-28 20:13:32.610 -08 000000066 INF: FPGA: Recv EX1MV
17-02-28 20:13:32.610 -08 000000064 INF: Excitation Filter 1: Moved -107 steps in 368.0381 ms
17-02-28 20:13:32.610 -08 000000038 INF: Excitation Filter 2: Moved -107 steps in 368.2491 ms
17-02-28 20:13:32.610 -08 000000038 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.4102 ms
17-02-28 20:13:32.610 -08 000000038 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.4859 ms
17-02-28 20:13:32.610 -08 000000064 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.1909 ms
17-02-28 20:13:32.610 -08 000000064 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.6007 ms
17-02-28 20:13:32.611 -08 000000038 INF: ======================================
17-02-28 20:13:32.611 -08 000000064 INF: ======================================
17-02-28 20:13:32.612 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:32.614 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:32.615 -08 000000034 INF: ===================Serial===================
17-02-28 20:13:32.615 -08 000000029 INF: ===================Camera TDI===================
17-02-28 20:13:32.615 -08 000000086 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:32.616 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:32.616 -08 000000058 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:13:32.616 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:32.616 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:32.616 -08 000000034 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:13:32.616 -08 000000029 INF: ===================Camera TDI, Parallel===================
17-02-28 20:13:32.617 -08 000000086 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:13:32.617 -08 000000034 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:13:32.618 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:13:32.618 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:13:32.618 -08 000000086 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:13:32.618 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:32.619 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:32.620 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:32.620 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:32.672 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:32.672 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:32.672 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:32.736 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:32.736 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:32.751 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:32.769 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:32.769 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:32.771 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:32.771 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:32.797 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:13:32.797 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:32.797 -08 000000058 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:13:32.797 -08 000000058 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:13:32.811 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:32.861 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:32.861 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:13:32.861 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:32.919 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:32.919 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:32.921 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:32.921 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:32.922 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:32.922 -08 000000058 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:13:32.922 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.046 -08 000000058 INF: Y Motor: Unshifted Position: 5929031
17-02-28 20:13:33.061 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:33.069 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:33.069 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:33.071 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:33.071 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:33.096 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.125 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:33.219 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:13:33.219 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:13:33.219 -08 000000095 INF: ===================Camera #0 Frame #1===================
17-02-28 20:13:33.221 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.221 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:13:33.221 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:13:33.221 -08 000000085 INF: ===================Camera #2 Frame #1===================
17-02-28 20:13:33.359 -08 000000058 INF: Y Motor: Unshifted Position: 5882077
17-02-28 20:13:33.372 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:13:33.372 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:13:33.372 -08 000000095 INF: ===================Camera #0 Frame #3===================
17-02-28 20:13:33.374 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:13:33.374 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:13:33.374 -08 000000085 INF: ===================Camera #2 Frame #3===================
17-02-28 20:13:33.375 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:33.409 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.437 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:33.529 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:13:33.529 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:13:33.529 -08 000000095 INF: ===================Camera #0 Frame #4===================
17-02-28 20:13:33.530 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:13:33.530 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:13:33.530 -08 000000085 INF: ===================Camera #2 Frame #4===================
17-02-28 20:13:33.533 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.671 -08 000000058 INF: Y Motor: Unshifted Position: 5835229
17-02-28 20:13:33.683 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:33.683 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:33.683 -08 000000085 INF: ===================Camera #2 Frame #5===================
17-02-28 20:13:33.684 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:33.684 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:33.684 -08 000000095 INF: ===================Camera #0 Frame #5===================
17-02-28 20:13:33.687 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:33.721 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.733 -08 000000032 INF: FPGA: Recv ZWAIT 
17-02-28 20:13:33.733 -08 000000034 INF: ===================Serial===================
17-02-28 20:13:33.735 -08 000000034 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:13:33.735 -08 000000034 INF: ===================Serial===================
17-02-28 20:13:33.737 -08 000000034 INF: ======================================
17-02-28 20:13:33.749 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:33.794 -08 000000076 INF: FPGA: Recv TDIYWAIT
17-02-28 20:13:33.794 -08 000000086 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:33.796 -08 000000086 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:13:33.797 -08 000000050 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:13:33.797 -08 000000050 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:13:33.797 -08 000000090 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:13:33.797 -08 000000050 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:13:33.797 -08 000000050 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:13:33.797 -08 000000050 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:13:33.797 -08 000000090 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:13:33.797 -08 000000090 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:13:33.797 -08 000000090 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:13:33.800 -08 000000090 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:13:33.836 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:13:33.836 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:13:33.836 -08 000000085 INF: ===================Camera #2 Frame #6===================
17-02-28 20:13:33.837 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:13:33.837 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:13:33.837 -08 000000095 INF: ===================Camera #0 Frame #6===================
17-02-28 20:13:33.839 -08 000000085 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:13:33.840 -08 000000095 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:13:33.840 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:33.841 -08 000000095 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:33.846 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.865 -08 000000085 INF: Camera #2 ReleaseBuffer
17-02-28 20:13:33.865 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:13:33.866 -08 000000085 INF: ======================================
17-02-28 20:13:33.889 -08 000000095 INF: Camera #0 ReleaseBuffer
17-02-28 20:13:33.889 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:13:33.890 -08 000000095 INF: ======================================
17-02-28 20:13:33.892 -08 000000029 INF: ===================Camera TDI===================
17-02-28 20:13:33.893 -08 000000029 INF: ======================================
17-02-28 20:13:33.984 -08 000000058 INF: Y Motor: Unshifted Position: 5790762
17-02-28 20:13:33.999 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:34.034 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:34.059 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:34.168 -08 000000095 INF: FPGA: Recv EX1MV
17-02-28 20:13:34.168 -08 000000050 INF: Excitation Filter 1: Moved 107 steps in 370.9532 ms
17-02-28 20:13:34.168 -08 000000050 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.2109 ms
17-02-28 20:13:34.168 -08 000000050 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.2851 ms
17-02-28 20:13:34.169 -08 000000050 INF: ======================================
17-02-28 20:13:34.170 -08 000000058 INF: Y Motor: Unshifted Position: 5790743
17-02-28 20:13:34.170 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:34.170 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:34.231 -08 000000010 INF: FPGA: Recv EX2MV
17-02-28 20:13:34.231 -08 000000090 INF: Excitation Filter 2: Moved 107 steps in 433.581 ms
17-02-28 20:13:34.231 -08 000000090 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 433.7703 ms
17-02-28 20:13:34.231 -08 000000090 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 433.8699 ms
17-02-28 20:13:34.232 -08 000000090 INF: ======================================
17-02-28 20:13:34.233 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:13:34.233 -08 000000058 INF: Y Motor: Moved to 62.9074 after 1311 ms
17-02-28 20:13:34.233 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:34.233 -08 000000086 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:34.234 -08 000000086 INF: ======================================
17-02-28 20:13:34.294 -08 000000058 INF: Y Motor: Recv v 4097\r
17-02-28 20:13:34.294 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:34.294 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:34.309 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:34.358 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:13:34.358 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:34.358 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:34.372 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:34.419 -08 000000058 INF: Y Motor: Recv v 134217728\r
17-02-28 20:13:34.419 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:13:34.419 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:34.419 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:34.482 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:13:34.482 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:34.482 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:34.482 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:34.545 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:34.545 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:34.545 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:34.607 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:34.607 -08 000000058 INF: ======================================
17-02-28 20:13:34.608 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:34.610 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:34.610 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:34.611 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:13:34.622 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:34.668 -08 000000062 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:13:34.668 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:34.684 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:34.729 -08 000000010 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:13:34.729 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:13:34.793 -08 000000066 INF: FPGA: Recv ZADCR 2423
17-02-28 20:13:34.793 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:13:34.793 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:13:34.856 -08 000000047 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:13:34.856 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:13:34.856 -08 000000018 INF: TDIScan finished after 6918.1567 ms
17-02-28 20:13:34.856 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:13:34.856 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:13:34.857 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:13:34.917 -08 000000106 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:13:34.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:34.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:34.919 -08 000000038 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:13:34.919 -08 000000029 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:13:34.919 -08 000000102 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:13:34.919 -08 000000029 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:13:34.919 -08 000000029 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:13:34.920 -08 000000102 INF: ======================================
17-02-28 20:13:34.920 -08 000000038 INF: ======================================
17-02-28 20:13:34.934 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:34.980 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:34.980 -08 000000029 INF: ======================================
17-02-28 20:13:34.981 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:34.982 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:34.983 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:13:34.997 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:35.023 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:35.023 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:13:35.045 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:35.046 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:13:35.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:35.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:13:35.111 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:35.111 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:35.111 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:35.112 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:13:35.120 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:35.120 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:13:35.120 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:13:35.247 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:35.307 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:35.557 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:35.619 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:35.749 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:13:35.772 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0516020684934979Best Z position at top surface = -0.123588684123805Best Z position at top surface + compensator offset = -0.100888684123805 C:3,L:3,T
17-02-28 20:13:35.774 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.123588684123805
17-02-28 20:13:35.774 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.7387
17-02-28 20:13:35.774 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0516020684934979
17-02-28 20:13:35.774 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.39197
17-02-28 20:13:35.774 -08 000000018 INF: Z-height at LaneTopSurface is -0.123588684123805.
17-02-28 20:13:35.774 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:35.869 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:35.907 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:13:35.907 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:13:35.932 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:35.977 -08 000000058 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:35.977 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:35.978 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.979 -08 000000018 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:13:35.979 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.980 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.980 -08 000000037 INF: ===================Move Tilt Motor 2===================
17-02-28 20:13:35.980 -08 000000076 INF: ===================Move Tilt Motor 3===================
17-02-28 20:13:35.981 -08 000000057 INF: ===================Move Tilt Motor 1===================
17-02-28 20:13:35.981 -08 000000037 INF: ======================================
17-02-28 20:13:35.981 -08 000000057 INF: ======================================
17-02-28 20:13:35.982 -08 000000076 INF: ======================================
17-02-28 20:13:35.983 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.983 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.984 -08 000000018 INF: ETF Best Z: -0.1008887 mm (26447 DAC)
17-02-28 20:13:35.984 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.985 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.985 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:13:35.985 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:13:36.394 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:36.395 -08 000000100 INF: FPGA: Recv MIOCOMPF
17-02-28 20:13:36.395 -08 000000018 INF: Compensator: Moved IntoPath in 409 ms
17-02-28 20:13:36.396 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:36.397 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:36.403 -08 000000018 INF: Swath 1 position calculated to be: {X=11.11493, Y=39.70011} from estimated center X= 11.592, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:13:36.403 -08 000000018 INF: Swath 2 position calculated to be: {X=12.22293, Y=39.70011} from estimated center X= 11.592, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:13:36.409 -08 000000018 INF: Swath 0: Converted transform from (57.74481, -45.82267) pixels to (0.02001, -0.01587) mm.
17-02-28 20:13:36.415 -08 000000018 INF: Swath 1: Converted transform from (31.86824, -42.36795) pixels to (0.01104, -0.01449) mm.
17-02-28 20:13:36.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011===================
17-02-28 20:13:36.416 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011===================
17-02-28 20:13:36.416 -08 000000018 INF: Transformed XStagePosition from 11.11493 mm to 11.1349401529878 mm.
17-02-28 20:13:36.428 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4742463337034 mm.
17-02-28 20:13:36.428 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2742463337034 mm.
17-02-28 20:13:36.428 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3649963337034 mm.
17-02-28 20:13:36.430 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:36.431 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:13:36.431 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:36.431 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = C_1
17-02-28 20:13:36.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:36.437 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:36.438 -08 000000053 INF: ===================MoveEmissionFilters===================
17-02-28 20:13:36.438 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:13:36.438 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:36.439 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:36.439 -08 000000057 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:36.439 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:36.439 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:13:36.439 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:36.439 -08 000000029 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:13:36.439 -08 000000029 INF: Z Motor: Moving to -0.1209 mm, started at -0.0100 mm
17-02-28 20:13:36.439 -08 000000029 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:13:36.439 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:36.440 -08 000000057 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:36.440 -08 000000058 INF: ===================Move X,Y, Parallel===================
17-02-28 20:13:36.440 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:36.440 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:36.440 -08 000000086 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:13:36.440 -08 000000010 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:13:36.440 -08 000000052 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:13:36.441 -08 000000038 INF: ===================Move X Motor without settling===================
17-02-28 20:13:36.441 -08 000000102 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:13:36.441 -08 000000050 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:13:36.441 -08 000000038 INF: X Motor: Xmit PR VM\n
17-02-28 20:13:36.441 -08 000000095 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:13:36.441 -08 000000030 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:13:36.441 -08 000000098 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:36.441 -08 000000106 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:13:36.441 -08 000000102 INF: ======================================
17-02-28 20:13:36.441 -08 000000030 INF: ======================================
17-02-28 20:13:36.441 -08 000000106 INF: ======================================
17-02-28 20:13:36.442 -08 000000098 INF: Y Motor: Moving to 64.4742 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:13:36.442 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:36.442 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:36.442 -08 000000086 INF: ======================================
17-02-28 20:13:36.442 -08 000000095 INF: ======================================
17-02-28 20:13:36.443 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:36.443 -08 000000052 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:13:36.444 -08 000000010 INF: ======================================
17-02-28 20:13:36.444 -08 000000050 INF: ======================================
17-02-28 20:13:36.444 -08 000000052 INF: ======================================
17-02-28 20:13:36.445 -08 000000076 INF: ======================================
17-02-28 20:13:36.445 -08 000000057 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:36.445 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:36.445 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:36.446 -08 000000057 INF: ======================================
17-02-28 20:13:36.446 -08 000000051 INF: ======================================
17-02-28 20:13:36.447 -08 000000037 INF: ======================================
17-02-28 20:13:36.448 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:36.448 -08 000000053 INF: ======================================
17-02-28 20:13:36.510 -08 000000104 INF: FPGA: Recv ZTRG 
17-02-28 20:13:36.510 -08 000000029 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:13:36.511 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:13:36.511 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:36.511 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:36.512 -08 000000038 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:13:36.512 -08 000000038 INF: X Motor: Xmit PR VI\n
17-02-28 20:13:36.571 -08 000000051 INF: FPGA: Recv ZYT 
17-02-28 20:13:36.571 -08 000000029 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:13:36.571 -08 000000029 INF: FPGA: Xmit ZMV 31690\n
17-02-28 20:13:36.573 -08 000000038 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:13:36.573 -08 000000038 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:13:36.573 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:13:36.573 -08 000000038 INF: X Motor: Moving to 11.1349 mm @15.000 mm/sec, started at 11.6685 mm
17-02-28 20:13:36.573 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:36.573 -08 000000038 INF: X Motor: Xmit MA -19606\n
17-02-28 20:13:36.636 -08 000000095 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:13:36.636 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:13:36.637 -08 000000038 INF: X Motor: Recv MA -19606\r\n>
17-02-28 20:13:36.637 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:13:36.637 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:36.637 -08 000000038 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:13:36.637 -08 000000098 INF: Y Motor: Set target position to 5947425 encoder counts
17-02-28 20:13:36.637 -08 000000098 INF: Y Motor: Xmit s r0xca 5947425\r
17-02-28 20:13:36.698 -08 000000053 INF: FPGA: Recv ZMV 
17-02-28 20:13:36.698 -08 000000029 INF: Z Motor: MoveAndTrigger 'ZMV' command took 126.8831 ms
17-02-28 20:13:36.698 -08 000000029 INF: FPGA: Xmit ZDACR\n
17-02-28 20:13:36.700 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:36.701 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:13:36.701 -08 000000098 INF: Y Motor: Start the move command
17-02-28 20:13:36.701 -08 000000098 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:36.760 -08 000000089 INF: FPGA: Recv ZDACR 31690
17-02-28 20:13:36.760 -08 000000029 INF: Z Motor: MoveAndTrigger took 320.8556 ms w/comms
17-02-28 20:13:36.760 -08 000000029 INF: Z Motor: After move to -0.1209, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:13:36.760 -08 000000029 INF: Z Motor: MoveAbsStepped took 321.0271 ms
17-02-28 20:13:36.760 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:36.761 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:36.762 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:13:36.762 -08 000000098 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:13:36.762 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:36.762 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:13:36.763 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:13:36.763 -08 000000051 INF: ===================Camera Arm TDI===================
17-02-28 20:13:36.763 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:36.764 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:36.764 -08 000000053 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:36.765 -08 000000053 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:36.765 -08 000000051 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:36.765 -08 000000053 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:13:36.822 -08 000000069 INF: FPGA: Recv ZSEL 
17-02-28 20:13:36.823 -08 000000053 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:36.823 -08 000000053 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:13:36.884 -08 000000101 INF: FPGA: Recv TDIBB
17-02-28 20:13:36.884 -08 000000053 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:36.885 -08 000000053 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:36.886 -08 000000098 INF: Y Motor: Unshifted Position: 5870555
17-02-28 20:13:36.886 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:36.887 -08 000000053 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:13:36.887 -08 000000053 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:13:36.888 -08 000000053 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:13:36.936 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:36.946 -08 000000104 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:36.946 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:36.948 -08 000000053 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:13:36.948 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:36.950 -08 000000053 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:13:36.950 -08 000000053 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:13:36.950 -08 000000053 INF: Z Motor: Arming to move to -0.0809 mm
17-02-28 20:13:36.950 -08 000000053 INF: FPGA: Xmit ZYT 6427425 4\n
17-02-28 20:13:37.008 -08 000000085 INF: FPGA: Recv ZYT 
17-02-28 20:13:37.008 -08 000000053 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6370555 enc / 63.706 mm / ) = 6427425 enc / 64.274 mm
17-02-28 20:13:37.008 -08 000000053 INF: FPGA: Xmit ZARM 21204\n
17-02-28 20:13:37.011 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:37.060 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:37.070 -08 000000055 INF: FPGA: Recv ZARM
17-02-28 20:13:37.070 -08 000000053 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9918 ms
17-02-28 20:13:37.070 -08 000000053 INF: Z Motor: ArmAbsStepped took 119.8702 ms
17-02-28 20:13:37.070 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:37.071 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:37.072 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:13:37.072 -08 000000038 INF: X Motor: Xmit PR ER\n
17-02-28 20:13:37.073 -08 000000053 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:13:37.073 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:13:37.075 -08 000000053 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:13:37.075 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:13:37.077 -08 000000053 INF: ======================================
17-02-28 20:13:37.136 -08 000000038 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:13:37.136 -08 000000038 INF: X Motor: Moved to 11.1338 after 499 ms
17-02-28 20:13:37.136 -08 000000038 INF: ======================================
17-02-28 20:13:37.198 -08 000000098 INF: Y Motor: Unshifted Position: 5947427
17-02-28 20:13:37.198 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:37.198 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:37.260 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:13:37.260 -08 000000098 INF: Y Motor: Moved to 64.4743 after 498 ms
17-02-28 20:13:37.260 -08 000000098 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:37.321 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:37.322 -08 000000098 INF: Y Motor: Recv v 4096\r
17-02-28 20:13:37.322 -08 000000098 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:37.322 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:37.385 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:37.386 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:13:37.386 -08 000000098 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:37.386 -08 000000098 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:37.448 -08 000000098 INF: Y Motor: Recv v 402653184\r
17-02-28 20:13:37.448 -08 000000098 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:13:37.448 -08 000000098 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:37.448 -08 000000098 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:37.509 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:13:37.509 -08 000000098 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:37.509 -08 000000098 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:37.509 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:37.571 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:13:37.571 -08 000000098 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:37.571 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:37.633 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:13:37.633 -08 000000098 INF: ======================================
17-02-28 20:13:37.634 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:13:37.635 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:37.635 -08 000000058 INF: ======================================
17-02-28 20:13:37.697 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:37.731 -08 000000051 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:37.732 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:37.732 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:37.747 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:37.749 -08 000000051 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:37.947 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:38.009 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:38.259 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:38.321 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:38.321 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:38.321 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:38.322 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:13:38.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 5 of 5 seconds left===================
17-02-28 20:13:38.804 -08 000000051 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:38.804 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:38.804 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:38.819 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:38.821 -08 000000051 INF: ===================Camera Arm TDI===================
17-02-28 20:13:38.822 -08 000000051 INF: ======================================
17-02-28 20:13:38.823 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:38.824 -08 000000029 INF: ======================================
17-02-28 20:13:38.825 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:38.826 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:38.826 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:13:38.826 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:13:38.882 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:13:38.882 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:13:38.942 -08 000000086 INF: FPGA: Recv ZFREQCL
17-02-28 20:13:38.942 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:13:38.942 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:38.943 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:39.004 -08 000000098 INF: FPGA: Recv TDIYERD 6447426
17-02-28 20:13:39.004 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447426 counts (64.474 mm)
17-02-28 20:13:39.004 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:39.005 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:39.005 -08 000000089 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:39.005 -08 000000062 INF: ===================Set YMotor gains for scans===================
17-02-28 20:13:39.006 -08 000000062 INF: ======================================
17-02-28 20:13:39.006 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:39.007 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:13:39.007 -08 000000089 INF: FPGA: Xmit TDIYPOS 6336500\n
17-02-28 20:13:39.066 -08 000000106 INF: FPGA: Recv TDIYPOS
17-02-28 20:13:39.066 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:39.067 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:13:39.068 -08 000000089 INF: FPGA: Xmit TDIYARM3 139264 6427425 1 1\n
17-02-28 20:13:39.131 -08 000000044 INF: FPGA: Recv TDIYARM3
17-02-28 20:13:39.131 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:39.132 -08 000000089 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:39.133 -08 000000089 INF: ======================================
17-02-28 20:13:39.134 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:39.135 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:39.135 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:39.136 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:39.136 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:39.137 -08 000000047 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:13:39.137 -08 000000090 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:13:39.137 -08 000000047 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:13:39.137 -08 000000047 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:13:39.137 -08 000000047 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:13:39.137 -08 000000090 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:13:39.137 -08 000000090 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:13:39.137 -08 000000090 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:13:39.137 -08 000000047 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:13:39.140 -08 000000090 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:13:39.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:39.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 4 of 5 seconds left===================
17-02-28 20:13:39.503 -08 000000030 INF: FPGA: Recv EX2MV
17-02-28 20:13:39.503 -08 000000030 INF: FPGA: Recv EX1MV
17-02-28 20:13:39.503 -08 000000090 INF: Excitation Filter 1: Moved -107 steps in 365.6069 ms
17-02-28 20:13:39.503 -08 000000090 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.7096 ms
17-02-28 20:13:39.503 -08 000000090 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.8088 ms
17-02-28 20:13:39.503 -08 000000047 INF: Excitation Filter 2: Moved -107 steps in 365.805 ms
17-02-28 20:13:39.503 -08 000000047 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.0061 ms
17-02-28 20:13:39.503 -08 000000047 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.0737 ms
17-02-28 20:13:39.503 -08 000000090 INF: ======================================
17-02-28 20:13:39.503 -08 000000047 INF: ======================================
17-02-28 20:13:39.504 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:39.506 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:39.506 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:13:39.506 -08 000000081 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:39.506 -08 000000058 INF: ===================FPGA Z Wait===================
17-02-28 20:13:39.507 -08 000000102 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:39.507 -08 000000102 INF: Y Motor: Moving to 14.8259 mm @6.500 mm/sec, started at 64.4743 mm
17-02-28 20:13:39.507 -08 000000102 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:39.507 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:39.507 -08 000000064 INF: ===================Camera TDI, Parallel===================
17-02-28 20:13:39.507 -08 000000081 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:13:39.507 -08 000000081 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:13:39.508 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:13:39.508 -08 000000055 INF: ===================Camera TDI===================
17-02-28 20:13:39.510 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:39.510 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:39.510 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:39.510 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:39.514 -08 000000058 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:13:39.570 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:13:39.570 -08 000000102 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:39.570 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:39.632 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:13:39.632 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:39.660 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:39.660 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:39.660 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:39.660 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:39.694 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:13:39.694 -08 000000102 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:39.694 -08 000000102 INF: Y Motor: Set target position to 982591 encoder counts
17-02-28 20:13:39.694 -08 000000102 INF: Y Motor: Xmit s r0xca 982591\r
17-02-28 20:13:39.756 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:13:39.756 -08 000000102 INF: Y Motor: Start the move command
17-02-28 20:13:39.756 -08 000000102 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:39.810 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:39.810 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:39.810 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:39.810 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:39.820 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:13:39.820 -08 000000102 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:13:39.820 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:39.878 -08 000000085 INF: FPGA: Recv ZWAIT 
17-02-28 20:13:39.878 -08 000000058 INF: ======================================
17-02-28 20:13:39.944 -08 000000102 INF: Y Motor: Unshifted Position: 5885352
17-02-28 20:13:39.960 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:13:39.960 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:39.960 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:39.960 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:39.960 -08 000000055 INF: ===================Camera #2 Frame #5===================
17-02-28 20:13:39.960 -08 000000101 INF: ===================Camera #0 Frame #5===================
17-02-28 20:13:39.994 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.119 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.126 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:13:40.126 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:13:40.126 -08 000000101 INF: ===================Camera #0 Frame #11===================
17-02-28 20:13:40.127 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:13:40.127 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:13:40.127 -08 000000055 INF: ===================Camera #2 Frame #11===================
17-02-28 20:13:40.256 -08 000000102 INF: Y Motor: Unshifted Position: 5680602
17-02-28 20:13:40.296 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:13:40.296 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:13:40.296 -08 000000101 INF: ===================Camera #0 Frame #17===================
17-02-28 20:13:40.298 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:13:40.298 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:13:40.298 -08 000000055 INF: ===================Camera #2 Frame #17===================
17-02-28 20:13:40.306 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:40.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 3 of 5 seconds left===================
17-02-28 20:13:40.429 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.466 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:13:40.466 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:13:40.466 -08 000000101 INF: ===================Camera #0 Frame #23===================
17-02-28 20:13:40.468 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:13:40.468 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:13:40.468 -08 000000055 INF: ===================Camera #2 Frame #23===================
17-02-28 20:13:40.566 -08 000000102 INF: Y Motor: Unshifted Position: 5478251
17-02-28 20:13:40.616 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.634 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:13:40.634 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:13:40.634 -08 000000101 INF: ===================Camera #0 Frame #29===================
17-02-28 20:13:40.637 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:13:40.637 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:13:40.637 -08 000000055 INF: ===================Camera #2 Frame #29===================
17-02-28 20:13:40.744 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.802 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:13:40.802 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:13:40.802 -08 000000101 INF: ===================Camera #0 Frame #35===================
17-02-28 20:13:40.806 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:13:40.806 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:13:40.806 -08 000000055 INF: ===================Camera #2 Frame #36===================
17-02-28 20:13:40.879 -08 000000102 INF: Y Motor: Unshifted Position: 5276091
17-02-28 20:13:40.929 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.970 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:13:40.970 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:13:40.970 -08 000000101 INF: ===================Camera #0 Frame #42===================
17-02-28 20:13:40.979 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:13:40.979 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:13:40.979 -08 000000055 INF: ===================Camera #2 Frame #42===================
17-02-28 20:13:41.054 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.142 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:13:41.142 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:13:41.142 -08 000000101 INF: ===================Camera #0 Frame #48===================
17-02-28 20:13:41.148 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:13:41.148 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:13:41.148 -08 000000055 INF: ===================Camera #2 Frame #48===================
17-02-28 20:13:41.192 -08 000000102 INF: Y Motor: Unshifted Position: 5072643
17-02-28 20:13:41.242 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.310 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:13:41.310 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:13:41.310 -08 000000101 INF: ===================Camera #0 Frame #54===================
17-02-28 20:13:41.317 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:13:41.317 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:13:41.317 -08 000000055 INF: ===================Camera #2 Frame #54===================
17-02-28 20:13:41.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:41.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 2 of 5 seconds left===================
17-02-28 20:13:41.366 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.479 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:13:41.479 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:13:41.479 -08 000000101 INF: ===================Camera #0 Frame #60===================
17-02-28 20:13:41.486 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:13:41.486 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:13:41.486 -08 000000055 INF: ===================Camera #2 Frame #61===================
17-02-28 20:13:41.502 -08 000000102 INF: Y Motor: Unshifted Position: 4869624
17-02-28 20:13:41.552 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.648 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:13:41.648 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:13:41.648 -08 000000101 INF: ===================Camera #0 Frame #67===================
17-02-28 20:13:41.658 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:13:41.658 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:13:41.658 -08 000000055 INF: ===================Camera #2 Frame #67===================
17-02-28 20:13:41.679 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.817 -08 000000102 INF: Y Motor: Unshifted Position: 4667258
17-02-28 20:13:41.820 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:13:41.820 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:13:41.820 -08 000000101 INF: ===================Camera #0 Frame #73===================
17-02-28 20:13:41.827 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:13:41.827 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:13:41.827 -08 000000055 INF: ===================Camera #2 Frame #73===================
17-02-28 20:13:41.867 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.989 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:13:41.989 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:13:41.989 -08 000000101 INF: ===================Camera #0 Frame #79===================
17-02-28 20:13:41.991 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.996 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:13:41.996 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:13:41.996 -08 000000055 INF: ===================Camera #2 Frame #79===================
17-02-28 20:13:42.129 -08 000000102 INF: Y Motor: Unshifted Position: 4465528
17-02-28 20:13:42.158 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:13:42.158 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:13:42.158 -08 000000101 INF: ===================Camera #0 Frame #85===================
17-02-28 20:13:42.165 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:13:42.165 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:13:42.165 -08 000000055 INF: ===================Camera #2 Frame #86===================
17-02-28 20:13:42.179 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:42.303 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:42.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:42.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 1 of 5 seconds left===================
17-02-28 20:13:42.327 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:13:42.327 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:13:42.327 -08 000000101 INF: ===================Camera #0 Frame #92===================
17-02-28 20:13:42.337 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:13:42.337 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:13:42.337 -08 000000055 INF: ===================Camera #2 Frame #92===================
17-02-28 20:13:42.439 -08 000000102 INF: Y Motor: Unshifted Position: 4261434
17-02-28 20:13:42.489 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:42.499 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:13:42.499 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:13:42.499 -08 000000101 INF: ===================Camera #0 Frame #98===================
17-02-28 20:13:42.506 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:13:42.506 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:13:42.506 -08 000000055 INF: ===================Camera #2 Frame #98===================
17-02-28 20:13:42.613 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:42.668 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:13:42.668 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:13:42.668 -08 000000101 INF: ===================Camera #0 Frame #104===================
17-02-28 20:13:42.675 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:13:42.675 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:13:42.675 -08 000000055 INF: ===================Camera #2 Frame #104===================
17-02-28 20:13:42.753 -08 000000102 INF: Y Motor: Unshifted Position: 4059923
17-02-28 20:13:42.803 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:42.837 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:13:42.837 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:13:42.837 -08 000000101 INF: ===================Camera #0 Frame #110===================
17-02-28 20:13:42.844 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:13:42.844 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:13:42.844 -08 000000055 INF: ===================Camera #2 Frame #111===================
17-02-28 20:13:42.927 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.006 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:13:43.006 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:13:43.006 -08 000000101 INF: ===================Camera #0 Frame #117===================
17-02-28 20:13:43.017 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:13:43.017 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:13:43.017 -08 000000055 INF: ===================Camera #2 Frame #117===================
17-02-28 20:13:43.063 -08 000000102 INF: Y Motor: Unshifted Position: 3855825
17-02-28 20:13:43.113 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.177 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:13:43.177 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:13:43.177 -08 000000101 INF: ===================Camera #0 Frame #123===================
17-02-28 20:13:43.187 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:13:43.187 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:13:43.187 -08 000000055 INF: ===================Camera #2 Frame #123===================
17-02-28 20:13:43.239 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:43.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:43.322 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:13:43.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:43.346 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:13:43.346 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:13:43.346 -08 000000101 INF: ===================Camera #0 Frame #129===================
17-02-28 20:13:43.357 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:13:43.357 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:13:43.357 -08 000000055 INF: ===================Camera #2 Frame #130===================
17-02-28 20:13:43.377 -08 000000102 INF: Y Motor: Unshifted Position: 3653889
17-02-28 20:13:43.421 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:13:43.427 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.500 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`11904 (0x03)\r\n(0xFF)
17-02-28 20:13:43.500 -08 000000042 INF: Current Position of Pump is: 11904
17-02-28 20:13:43.515 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:13:43.515 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:13:43.515 -08 000000101 INF: ===================Camera #0 Frame #135===================
17-02-28 20:13:43.530 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:13:43.530 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:13:43.530 -08 000000055 INF: ===================Camera #2 Frame #136===================
17-02-28 20:13:43.551 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.600 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:13:43.684 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:13:43.684 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:13:43.684 -08 000000101 INF: ===================Camera #0 Frame #142===================
17-02-28 20:13:43.688 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`11904 (0x03)\r\n(0xFF)
17-02-28 20:13:43.688 -08 000000042 INF: Current Position of Pump is: 11904
17-02-28 20:13:43.688 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Dispensing port PortC===================
17-02-28 20:13:43.689 -08 000000102 INF: Y Motor: Unshifted Position: 3451091
17-02-28 20:13:43.701 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:13:43.701 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:13:43.701 -08 000000055 INF: ===================Camera #2 Frame #142===================
17-02-28 20:13:43.739 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.788 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD11904R\r
17-02-28 20:13:43.857 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:13:43.857 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:13:43.857 -08 000000101 INF: ===================Camera #0 Frame #148===================
17-02-28 20:13:43.863 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.871 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:13:43.871 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:13:43.871 -08 000000055 INF: ===================Camera #2 Frame #148===================
17-02-28 20:13:43.874 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:43.974 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:43.999 -08 000000102 INF: Y Motor: Unshifted Position: 3245694
17-02-28 20:13:44.026 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:13:44.026 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:13:44.026 -08 000000101 INF: ===================Camera #0 Frame #154===================
17-02-28 20:13:44.041 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:13:44.041 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:13:44.041 -08 000000055 INF: ===================Camera #2 Frame #155===================
17-02-28 20:13:44.049 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.060 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:44.173 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.195 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:13:44.195 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:13:44.195 -08 000000101 INF: ===================Camera #0 Frame #160===================
17-02-28 20:13:44.214 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:13:44.214 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:13:44.214 -08 000000055 INF: ===================Camera #2 Frame #161===================
17-02-28 20:13:44.310 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:44.313 -08 000000102 INF: Y Motor: Unshifted Position: 3043984
17-02-28 20:13:44.363 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.365 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:13:44.365 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:13:44.365 -08 000000101 INF: ===================Camera #0 Frame #167===================
17-02-28 20:13:44.371 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:44.385 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:13:44.385 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:13:44.385 -08 000000055 INF: ===================Camera #2 Frame #167===================
17-02-28 20:13:44.487 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.538 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:13:44.538 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:13:44.538 -08 000000101 INF: ===================Camera #0 Frame #173===================
17-02-28 20:13:44.554 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:13:44.554 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:13:44.554 -08 000000055 INF: ===================Camera #2 Frame #174===================
17-02-28 20:13:44.621 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:44.622 -08 000000102 INF: Y Motor: Unshifted Position: 2841190
17-02-28 20:13:44.672 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.683 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:44.708 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:13:44.708 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:13:44.708 -08 000000101 INF: ===================Camera #0 Frame #179===================
17-02-28 20:13:44.726 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:13:44.726 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:13:44.726 -08 000000055 INF: ===================Camera #2 Frame #180===================
17-02-28 20:13:44.799 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.878 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:13:44.878 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:13:44.878 -08 000000101 INF: ===================Camera #0 Frame #186===================
17-02-28 20:13:44.896 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:13:44.896 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:13:44.896 -08 000000055 INF: ===================Camera #2 Frame #186===================
17-02-28 20:13:44.933 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:44.935 -08 000000102 INF: Y Motor: Unshifted Position: 2638168
17-02-28 20:13:44.985 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.996 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:45.051 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:13:45.051 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:13:45.051 -08 000000101 INF: ===================Camera #0 Frame #192===================
17-02-28 20:13:45.066 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:13:45.066 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:13:45.066 -08 000000055 INF: ===================Camera #2 Frame #192===================
17-02-28 20:13:45.110 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:45.220 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:13:45.220 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:13:45.220 -08 000000101 INF: ===================Camera #0 Frame #198===================
17-02-28 20:13:45.236 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:13:45.236 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:13:45.236 -08 000000055 INF: ===================Camera #2 Frame #199===================
17-02-28 20:13:45.246 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:45.249 -08 000000102 INF: Y Motor: Unshifted Position: 2435379
17-02-28 20:13:45.299 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:45.309 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:45.390 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-02-28 20:13:45.390 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-02-28 20:13:45.390 -08 000000101 INF: ===================Camera #0 Frame #204===================
17-02-28 20:13:45.410 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:13:45.410 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:13:45.410 -08 000000055 INF: ===================Camera #2 Frame #205===================
17-02-28 20:13:45.423 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:45.559 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:45.559 -08 000000102 INF: Y Motor: Unshifted Position: 2232362
17-02-28 20:13:45.560 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:13:45.560 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:13:45.560 -08 000000101 INF: ===================Camera #0 Frame #211===================
17-02-28 20:13:45.581 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:13:45.581 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:13:45.581 -08 000000055 INF: ===================Camera #2 Frame #211===================
17-02-28 20:13:45.609 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:45.619 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:45.733 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:13:45.733 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:13:45.733 -08 000000101 INF: ===================Camera #0 Frame #217===================
17-02-28 20:13:45.735 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:45.751 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:13:45.751 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:13:45.751 -08 000000055 INF: ===================Camera #2 Frame #218===================
17-02-28 20:13:45.869 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:45.871 -08 000000102 INF: Y Motor: Unshifted Position: 2029553
17-02-28 20:13:45.903 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:13:45.903 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:13:45.903 -08 000000101 INF: ===================Camera #0 Frame #223===================
17-02-28 20:13:45.921 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:45.925 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:13:45.925 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:13:45.925 -08 000000055 INF: ===================Camera #2 Frame #224===================
17-02-28 20:13:45.932 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:45.932 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:45.932 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:13:46.045 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:46.073 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:13:46.073 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:13:46.073 -08 000000101 INF: ===================Camera #0 Frame #230===================
17-02-28 20:13:46.095 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:13:46.095 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:13:46.095 -08 000000055 INF: ===================Camera #2 Frame #230===================
17-02-28 20:13:46.185 -08 000000102 INF: Y Motor: Unshifted Position: 1827831
17-02-28 20:13:46.236 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:46.247 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:13:46.247 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:13:46.247 -08 000000101 INF: ===================Camera #0 Frame #236===================
17-02-28 20:13:46.266 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:13:46.266 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:13:46.266 -08 000000055 INF: ===================Camera #2 Frame #237===================
17-02-28 20:13:46.357 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:46.417 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:13:46.417 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:13:46.417 -08 000000101 INF: ===================Camera #0 Frame #242===================
17-02-28 20:13:46.440 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:13:46.440 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:13:46.440 -08 000000055 INF: ===================Camera #2 Frame #243===================
17-02-28 20:13:46.496 -08 000000102 INF: Y Motor: Unshifted Position: 1622443
17-02-28 20:13:46.546 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:46.587 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:13:46.587 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:13:46.587 -08 000000101 INF: ===================Camera #0 Frame #248===================
17-02-28 20:13:46.611 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:13:46.611 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:13:46.611 -08 000000055 INF: ===================Camera #2 Frame #249===================
17-02-28 20:13:46.670 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:46.757 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:13:46.757 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:13:46.757 -08 000000101 INF: ===================Camera #0 Frame #255===================
17-02-28 20:13:46.782 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:13:46.782 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:13:46.782 -08 000000055 INF: ===================Camera #2 Frame #256===================
17-02-28 20:13:46.810 -08 000000102 INF: Y Motor: Unshifted Position: 1422021
17-02-28 20:13:46.860 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:46.930 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:13:46.930 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:13:46.930 -08 000000101 INF: ===================Camera #0 Frame #261===================
17-02-28 20:13:46.956 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:13:46.956 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:13:46.956 -08 000000055 INF: ===================Camera #2 Frame #262===================
17-02-28 20:13:46.981 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:47.033 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:13:47.100 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:13:47.100 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:13:47.100 -08 000000101 INF: ===================Camera #0 Frame #267===================
17-02-28 20:13:47.119 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:47.120 -08 000000102 INF: Y Motor: Unshifted Position: 1217915
17-02-28 20:13:47.126 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:13:47.126 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:13:47.126 -08 000000055 INF: ===================Camera #2 Frame #268===================
17-02-28 20:13:47.170 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:47.219 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:47.243 -08 000000051 INF: FPGA: Recv TDIYWAIT
17-02-28 20:13:47.243 -08 000000081 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:47.245 -08 000000081 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:13:47.246 -08 000000038 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:13:47.246 -08 000000086 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:13:47.246 -08 000000038 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:13:47.246 -08 000000038 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:13:47.246 -08 000000038 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:13:47.246 -08 000000086 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:13:47.246 -08 000000038 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:13:47.246 -08 000000086 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:13:47.246 -08 000000086 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:13:47.247 -08 000000086 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:13:47.270 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:13:47.270 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:13:47.270 -08 000000101 INF: ===================Camera #0 Frame #272===================
17-02-28 20:13:47.286 -08 000000101 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:13:47.287 -08 000000101 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:47.295 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:47.306 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:47.431 -08 000000102 INF: Y Motor: Unshifted Position: 1015548
17-02-28 20:13:47.453 -08 000000101 INF: Camera #0 ReleaseBuffer
17-02-28 20:13:47.453 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:13:47.453 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:13:47.453 -08 000000055 INF: ===================Camera #2 Frame #272===================
17-02-28 20:13:47.453 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:13:47.465 -08 000000055 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:13:47.466 -08 000000055 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:47.481 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:47.486 -08 000000101 INF: ======================================
17-02-28 20:13:47.556 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:47.618 -08 000000034 INF: FPGA: Recv EX1MV
17-02-28 20:13:47.618 -08 000000034 INF: FPGA: Recv EX2MV
17-02-28 20:13:47.618 -08 000000038 INF: Excitation Filter 1: Moved 107 steps in 371.929 ms
17-02-28 20:13:47.618 -08 000000038 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.0857 ms
17-02-28 20:13:47.618 -08 000000038 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.1739 ms
17-02-28 20:13:47.618 -08 000000086 INF: Excitation Filter 2: Moved 107 steps in 371.8317 ms
17-02-28 20:13:47.618 -08 000000086 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.264 ms
17-02-28 20:13:47.618 -08 000000086 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.3427 ms
17-02-28 20:13:47.618 -08 000000038 INF: ======================================
17-02-28 20:13:47.619 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:47.619 -08 000000086 INF: ======================================
17-02-28 20:13:47.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:47.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-02-28 20:13:47.620 -08 000000102 INF: Y Motor: Unshifted Position: 982591
17-02-28 20:13:47.620 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:47.620 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:47.620 -08 000000081 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:47.621 -08 000000081 INF: ======================================
17-02-28 20:13:47.661 -08 000000055 INF: Camera #2 ReleaseBuffer
17-02-28 20:13:47.661 -08 000000055 INF: ===================Camera TDI===================
17-02-28 20:13:47.680 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:13:47.680 -08 000000102 INF: Y Motor: Moved to 14.8259 after 7859 ms
17-02-28 20:13:47.680 -08 000000102 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:47.695 -08 000000055 INF: ======================================
17-02-28 20:13:47.696 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:13:47.697 -08 000000064 INF: ======================================
17-02-28 20:13:47.746 -08 000000102 INF: Y Motor: Recv v 4097\r
17-02-28 20:13:47.746 -08 000000102 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:47.746 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:47.808 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:13:47.808 -08 000000102 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:47.808 -08 000000102 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:47.867 -08 000000102 INF: Y Motor: Recv v 134217728\r
17-02-28 20:13:47.867 -08 000000102 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:13:47.867 -08 000000102 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:47.867 -08 000000102 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:47.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:47.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:47.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:47.928 -08 000000042 INF: WaitCommand(10000) start
17-02-28 20:13:47.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 10 of 10 seconds left===================
17-02-28 20:13:47.932 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:13:47.932 -08 000000102 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:47.932 -08 000000102 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:47.932 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:47.994 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:13:47.994 -08 000000102 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:47.994 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:48.056 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:13:48.056 -08 000000102 INF: ======================================
17-02-28 20:13:48.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:48.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:48.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.059 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:13:48.116 -08 000000098 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:13:48.116 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:48.178 -08 000000090 INF: FPGA: Recv TDIYERD 1482592
17-02-28 20:13:48.178 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:13:48.240 -08 000000104 INF: FPGA: Recv ZADCR 30466
17-02-28 20:13:48.240 -08 000000018 INF: At scan end Y pos = 14.826 and Z pos = -0.117. Y moved -48.539 mm
17-02-28 20:13:48.240 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:13:48.302 -08 000000076 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:13:48.302 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:13:48.302 -08 000000018 INF: TDIScan finished after 11885.3549 ms
17-02-28 20:13:48.302 -08 000000018 INF: Image[0]: Y should trigger at 63.365 mm, 2nd row was at 64.274 mm (error = 0.909 mm)
17-02-28 20:13:48.302 -08 000000018 INF: Image[2]: Y should trigger at 63.365 mm, 2nd row was at 64.274 mm (error = 0.909 mm)
17-02-28 20:13:48.304 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.337 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.852 um
17-02-28 20:13:48.337 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.338 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:13:48.368 -08 000000066 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:13:48.369 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.369 -08 000000089 INF: ===================Dither Clean Up Command===================
17-02-28 20:13:48.369 -08 000000047 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:13:48.369 -08 000000102 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:13:48.370 -08 000000062 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:13:48.370 -08 000000062 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:13:48.370 -08 000000047 INF: ======================================
17-02-28 20:13:48.370 -08 000000062 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:13:48.370 -08 000000102 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:13:48.370 -08 000000102 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:13:48.370 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:13:48.370 -08 000000037 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:48.373 -08 000000090 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:13:48.374 -08 000000037 INF: ===================LFT:Extracting coords===================
17-02-28 20:13:48.399 -08 000000037 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:48.399 -08 000000037 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:13:48.400 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.400 -08 000000045 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.400 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.400 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.401 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:48.401 -08 000000076 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:48.401 -08 000000034 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:48.401 -08 000000045 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:48.429 -08 000000108 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:48.430 -08 000000108 INF: FPGA: Recv ZSEL 
17-02-28 20:13:48.430 -08 000000090 INF: FPGA: Xmit ZDACW 31690\n
17-02-28 20:13:48.430 -08 000000102 INF: ======================================
17-02-28 20:13:48.431 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:48.431 -08 000000062 INF: ======================================
17-02-28 20:13:48.475 -08 000000076 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:48.475 -08 000000034 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:48.475 -08 000000045 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:48.475 -08 000000032 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:48.489 -08 000000052 INF: FPGA: Recv ZDACW 
17-02-28 20:13:48.490 -08 000000090 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:13:48.490 -08 000000090 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:13:48.554 -08 000000062 INF: FPGA: Recv TDIBB
17-02-28 20:13:48.554 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:13:48.555 -08 000000090 INF: ======================================
17-02-28 20:13:48.626 -08 000000076 INF: LFT found best fwhm score 2.000014 in 151 ms
17-02-28 20:13:48.626 -08 000000076 INF: LFT found good score at index 1669 with fwhm value 2.000014. Next cycle, cycle 4 starting Z position for top surface is at -0.123 mm FC:A, C:3,L:3,T
17-02-28 20:13:48.626 -08 000000034 INF: LFT found best fwhm score 2.209527 in 151 ms
17-02-28 20:13:48.626 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.626 -08 000000034 INF: LFT found good score at index 5233 with fwhm value 2.209527. Next cycle, cycle 4 starting Z position for top surface is at -0.123 mm FC:A, C:3,L:3,T
17-02-28 20:13:48.626 -08 000000045 INF: LFT found best fwhm score 2.000089 in 151 ms
17-02-28 20:13:48.627 -08 000000045 INF: LFT found good score at index 1105 with fwhm value 2.000089. Next cycle, cycle 4 starting Z position for top surface is at -0.124 mm FC:A, C:3,L:3,T
17-02-28 20:13:48.627 -08 000000032 INF: LFT found best fwhm score 2.000196 in 152 ms
17-02-28 20:13:48.627 -08 000000032 INF: LFT found good score at index 2077 with fwhm value 2.000196. Next cycle, cycle 4 starting Z position for top surface is at -0.123 mm FC:A, C:3,L:3,T
17-02-28 20:13:48.627 -08 000000076 INF: ======================================
17-02-28 20:13:48.627 -08 000000045 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.627 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.627 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.627 -08 000000045 INF: ======================================
17-02-28 20:13:48.627 -08 000000032 INF: ======================================
17-02-28 20:13:48.627 -08 000000034 INF: ======================================
17-02-28 20:13:48.629 -08 000000037 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:48.629 -08 000000037 INF: LFT weighted average best Z for top surface is at -0.123mm FC:A, C:3,L:3,T
17-02-28 20:13:48.630 -08 000000037 INF: ======================================
17-02-28 20:13:48.631 -08 000000089 INF: ======================================
17-02-28 20:13:48.632 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:13:48.634 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.634 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011===================
17-02-28 20:13:48.634 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011===================
17-02-28 20:13:48.635 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:13:48.635 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011===================
17-02-28 20:13:48.635 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 10 of 10 seconds left, Waiting for image analysis===================
17-02-28 20:13:48.635 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 10 of 10 seconds left===================
17-02-28 20:13:48.658 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:13:48.658 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:48.659 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011===================
17-02-28 20:13:48.659 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:48.659 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011===================
17-02-28 20:13:48.659 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:13:48.659 -08 000000018 INF: Transformed XStagePosition from 12.22293 mm to 12.2339699547738 mm.
17-02-28 20:13:48.671 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4756263330355 mm.
17-02-28 20:13:48.671 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2756263330355 mm.
17-02-28 20:13:48.671 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3663763330355 mm.
17-02-28 20:13:48.674 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.674 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:13:48.674 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.674 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -120.9 um, section = C_1
17-02-28 20:13:48.676 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:48.676 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:48.682 -08 000000044 INF: ===================MoveEmissionFilters===================
17-02-28 20:13:48.683 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:13:48.684 -08 000000030 INF: ===================Move X,Y, Parallel===================
17-02-28 20:13:48.685 -08 000000095 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:48.685 -08 000000095 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:48.688 -08 000000010 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:48.689 -08 000000010 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:13:48.689 -08 000000010 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:13:48.689 -08 000000010 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:48.691 -08 000000010 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:13:48.694 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:48.694 -08 000000076 INF: ===================Move X Motor without settling===================
17-02-28 20:13:48.694 -08 000000076 INF: X Motor: Xmit PR VM\n
17-02-28 20:13:48.696 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:48.696 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:13:48.696 -08 000000108 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:13:48.697 -08 000000047 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:48.697 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:48.697 -08 000000029 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:48.698 -08 000000029 INF: Y Motor: Moving to 64.4756 mm @25.000 mm/sec, started at 14.8259 mm
17-02-28 20:13:48.698 -08 000000104 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:48.698 -08 000000108 INF: ======================================
17-02-28 20:13:48.698 -08 000000047 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:48.698 -08 000000029 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:48.698 -08 000000029 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:48.698 -08 000000104 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:48.699 -08 000000104 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:13:48.701 -08 000000037 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:48.701 -08 000000032 INF: ===================Camera Arm TDI===================
17-02-28 20:13:48.701 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":3,"Tile":1104,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF280","HCSMMF192","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.701 -08 000000055 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:13:48.701 -08 000000108 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:13:48.701 -08 000000052 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:13:48.701 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:13:48.701 -08 000000037 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:48.702 -08 000000055 INF: ======================================
17-02-28 20:13:48.702 -08 000000087 INF: ======================================
17-02-28 20:13:48.702 -08 000000032 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:48.703 -08 000000058 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:13:48.703 -08 000000058 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:13:48.703 -08 000000058 INF: ======================================
17-02-28 20:13:48.703 -08 000000052 INF: ======================================
17-02-28 20:13:48.703 -08 000000047 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:48.703 -08 000000032 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:48.704 -08 000000055 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:13:48.704 -08 000000087 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:13:48.704 -08 000000055 INF: ======================================
17-02-28 20:13:48.705 -08 000000087 INF: ======================================
17-02-28 20:13:48.705 -08 000000047 INF: ======================================
17-02-28 20:13:48.705 -08 000000108 INF: ======================================
17-02-28 20:13:48.706 -08 000000095 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:48.706 -08 000000037 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:48.707 -08 000000095 INF: ======================================
17-02-28 20:13:48.709 -08 000000037 INF: ======================================
17-02-28 20:13:48.712 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:48.716 -08 000000100 INF: ======================================
17-02-28 20:13:48.720 -08 000000044 INF: ======================================
17-02-28 20:13:48.745 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":3,"Tile":1102,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF262","HCSMMF184","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.758 -08 000000044 INF: FPGA: Recv ZSEL 
17-02-28 20:13:48.758 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":3,"Tile":1105,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF254","HCSMMF203","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.759 -08 000000104 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:48.759 -08 000000104 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:13:48.760 -08 000000076 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:13:48.760 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:48.760 -08 000000029 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:48.760 -08 000000076 INF: X Motor: Xmit PR VI\n
17-02-28 20:13:48.760 -08 000000029 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:48.824 -08 000000047 INF: FPGA: Recv TDIBB
17-02-28 20:13:48.825 -08 000000104 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:48.826 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:48.826 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:48.826 -08 000000076 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:13:48.826 -08 000000076 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:13:48.826 -08 000000076 INF: X Motor: Moving to 12.2340 mm @15.000 mm/sec, started at 11.1338 mm
17-02-28 20:13:48.826 -08 000000076 INF: X Motor: Xmit MA -19155\n
17-02-28 20:13:48.826 -08 000000104 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:48.826 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:48.828 -08 000000104 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:13:48.828 -08 000000104 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:13:48.828 -08 000000104 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:13:48.861 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":3,"Tile":1103,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF209","HCSMMF242","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.862 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":3,"Tile":1101,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF261","HCSMMF195","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.863 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":3,"Tile":1108,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF221","HCSMMF224","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.864 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":3,"Tile":1109,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF239","HCSMMF282","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.865 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":3,"Tile":1107,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF277","HCSMMF267","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.866 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":3,"Tile":1106,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF213","HCSMMF236","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.867 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":3,"Tile":1111,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF286","HCSMMF226","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.867 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":3,"Tile":1110,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF260","HCSMMF205","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.868 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":3,"Tile":1112,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF177","HCSMMF269","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.869 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":3,"Tile":1113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF245","HCSMMF253","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.870 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":3,"Tile":1114,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF212","HCSMMF250","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.871 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":3,"Tile":1117,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF229","HCSMMF246","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.872 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":3,"Tile":1115,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF243","HCSMMF185","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.873 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":3,"Tile":1116,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF268","HCSMMF188","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.873 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":3,"Tile":1118,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF273","HCSMMF220","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.874 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":3,"Tile":1119,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF202","HCSMMF182","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.875 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":3,"Tile":1121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF275","HCSMMF234","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.876 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":3,"Tile":1122,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF214","HCSMMF256","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.877 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":3,"Tile":1120,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF200","HCSMMF240","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.878 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":3,"Tile":1123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF191","HCSMMF259","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.879 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":3,"Tile":1126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF251","HCSMMF179","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.880 -08 000000052 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:48.880 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:48.880 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":3,"Tile":1125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF222","HCSMMF271","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.881 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":3,"Tile":1128,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF183","HCSMMF227","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.882 -08 000000076 INF: X Motor: Recv MA -19155\r\n>
17-02-28 20:13:48.882 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:13:48.882 -08 000000029 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:48.882 -08 000000076 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:13:48.882 -08 000000029 INF: Y Motor: Set target position to 5947563 encoder counts
17-02-28 20:13:48.882 -08 000000029 INF: Y Motor: Xmit s r0xca 5947563\r
17-02-28 20:13:48.882 -08 000000104 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:13:48.882 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:48.883 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":3,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF181","HCSMMF207","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.883 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":3,"Tile":1124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF204","HCSMMF270","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.884 -08 000000104 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:13:48.884 -08 000000104 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:13:48.884 -08 000000104 INF: Z Motor: Arming to move to -0.0809 mm
17-02-28 20:13:48.884 -08 000000104 INF: FPGA: Xmit ZYT 6427563 4\n
17-02-28 20:13:48.885 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:48.891 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:13:48.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:48.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 9 of 10 seconds left===================
17-02-28 20:13:48.942 -08 000000034 INF: FPGA: Recv ZYT 
17-02-28 20:13:48.942 -08 000000104 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1482591 enc / 14.826 mm / ) = 6427563 enc / 64.276 mm
17-02-28 20:13:48.942 -08 000000104 INF: FPGA: Xmit ZARM 21204\n
17-02-28 20:13:48.944 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:48.944 -08 000000029 INF: Y Motor: Start the move command
17-02-28 20:13:48.944 -08 000000029 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:48.972 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:48.972 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:13:49.004 -08 000000108 INF: FPGA: Recv ZARM
17-02-28 20:13:49.004 -08 000000104 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8492 ms
17-02-28 20:13:49.004 -08 000000104 INF: Z Motor: ArmAbsStepped took 119.6687 ms
17-02-28 20:13:49.004 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:49.006 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:49.006 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:13:49.006 -08 000000029 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:13:49.006 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.007 -08 000000104 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:13:49.007 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:13:49.008 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:49.009 -08 000000104 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:13:49.009 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:13:49.010 -08 000000104 INF: ======================================
17-02-28 20:13:49.014 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:13:49.101 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:49.107 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:13:49.132 -08 000000029 INF: Y Motor: Unshifted Position: 1069219
17-02-28 20:13:49.182 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.209 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:49.215 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:13:49.298 -08 000000032 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:49.298 -08 000000032 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:49.298 -08 000000032 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:49.308 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.313 -08 000000032 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:49.315 -08 000000032 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:49.319 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:49.446 -08 000000029 INF: Y Motor: Unshifted Position: 1774260
17-02-28 20:13:49.496 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.506 -08 000000076 INF: X Motor: Xmit PR ER\n
17-02-28 20:13:49.570 -08 000000076 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:13:49.570 -08 000000076 INF: X Motor: Moved to 12.2349 after 688 ms
17-02-28 20:13:49.570 -08 000000076 INF: ======================================
17-02-28 20:13:49.616 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:13:49.618 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.757 -08 000000029 INF: Y Motor: Unshifted Position: 2560114
17-02-28 20:13:49.807 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.922 -08 000000032 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:49.922 -08 000000032 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:49.922 -08 000000032 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:49.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:49.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 8 of 10 seconds left===================
17-02-28 20:13:49.931 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.938 -08 000000032 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:49.940 -08 000000032 INF: ===================Camera Arm TDI===================
17-02-28 20:13:49.942 -08 000000032 INF: ======================================
17-02-28 20:13:49.944 -08 000000010 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:49.945 -08 000000010 INF: ======================================
17-02-28 20:13:50.083 -08 000000029 INF: Y Motor: Unshifted Position: 3373387
17-02-28 20:13:50.133 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:50.257 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:50.396 -08 000000029 INF: Y Motor: Unshifted Position: 4155933
17-02-28 20:13:50.446 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:50.570 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:50.706 -08 000000029 INF: Y Motor: Unshifted Position: 4930924
17-02-28 20:13:50.756 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:50.883 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:50.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:50.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 7 of 10 seconds left===================
17-02-28 20:13:51.019 -08 000000029 INF: Y Motor: Unshifted Position: 5708830
17-02-28 20:13:51.069 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:51.193 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:51.332 -08 000000029 INF: Y Motor: Unshifted Position: 5947566
17-02-28 20:13:51.332 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:51.332 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:51.394 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:13:51.394 -08 000000029 INF: Y Motor: Moved to 64.4757 after 2388 ms
17-02-28 20:13:51.394 -08 000000029 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:51.456 -08 000000029 INF: Y Motor: Recv v 4096\r
17-02-28 20:13:51.456 -08 000000029 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:51.456 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:51.520 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:13:51.520 -08 000000029 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:51.520 -08 000000029 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:51.580 -08 000000029 INF: Y Motor: Recv v 402653184\r
17-02-28 20:13:51.580 -08 000000029 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:13:51.580 -08 000000029 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:51.580 -08 000000029 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:51.642 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:13:51.642 -08 000000029 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:51.642 -08 000000029 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:51.642 -08 000000029 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:51.707 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:51.707 -08 000000029 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:51.707 -08 000000029 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:51.782 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:51.782 -08 000000029 INF: ======================================
17-02-28 20:13:51.783 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:13:51.784 -08 000000030 INF: ======================================
17-02-28 20:13:51.785 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:51.786 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:51.786 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:13:51.786 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:13:51.832 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:13:51.832 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:13:51.845 -08 000000076 INF: FPGA: Recv ZFREQCL
17-02-28 20:13:51.845 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:13:51.846 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:51.846 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:51.906 -08 000000030 INF: FPGA: Recv TDIYERD 6447564
17-02-28 20:13:51.906 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447564 counts (64.476 mm)
17-02-28 20:13:51.906 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:51.907 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:51.908 -08 000000102 INF: ===================Set YMotor gains for scans===================
17-02-28 20:13:51.908 -08 000000106 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:51.908 -08 000000102 INF: ======================================
17-02-28 20:13:51.908 -08 000000106 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:51.909 -08 000000106 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:13:51.909 -08 000000106 INF: FPGA: Xmit TDIYPOS 6336638\n
17-02-28 20:13:51.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:51.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left===================
17-02-28 20:13:51.968 -08 000000069 INF: FPGA: Recv TDIYPOS
17-02-28 20:13:51.968 -08 000000106 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:51.970 -08 000000106 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:13:51.970 -08 000000106 INF: FPGA: Xmit TDIYARM3 139264 6427563 1 1\n
17-02-28 20:13:52.033 -08 000000034 INF: FPGA: Recv TDIYARM3
17-02-28 20:13:52.033 -08 000000106 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:52.035 -08 000000106 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:52.036 -08 000000106 INF: ======================================
17-02-28 20:13:52.037 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:52.037 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:52.038 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:52.038 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:52.039 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:52.040 -08 000000085 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:13:52.040 -08 000000085 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:13:52.040 -08 000000085 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:13:52.040 -08 000000032 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:13:52.040 -08 000000085 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:13:52.040 -08 000000085 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:13:52.040 -08 000000032 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:13:52.040 -08 000000032 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:13:52.040 -08 000000032 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:13:52.041 -08 000000032 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:13:52.405 -08 000000044 INF: FPGA: Recv EX1MV
17-02-28 20:13:52.405 -08 000000044 INF: FPGA: Recv EX2MV
17-02-28 20:13:52.405 -08 000000032 INF: Excitation Filter 2: Moved -107 steps in 364.8884 ms
17-02-28 20:13:52.405 -08 000000032 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.091 ms
17-02-28 20:13:52.405 -08 000000032 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.1785 ms
17-02-28 20:13:52.405 -08 000000085 INF: Excitation Filter 1: Moved -107 steps in 365.2233 ms
17-02-28 20:13:52.405 -08 000000085 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.64 ms
17-02-28 20:13:52.405 -08 000000085 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.7099 ms
17-02-28 20:13:52.406 -08 000000032 INF: ======================================
17-02-28 20:13:52.406 -08 000000085 INF: ======================================
17-02-28 20:13:52.407 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:52.408 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:52.409 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:13:52.409 -08 000000030 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:52.409 -08 000000051 INF: ===================FPGA Z Wait===================
17-02-28 20:13:52.409 -08 000000066 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:52.409 -08 000000051 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:13:52.409 -08 000000066 INF: Y Motor: Moving to 14.8273 mm @6.500 mm/sec, started at 64.4757 mm
17-02-28 20:13:52.409 -08 000000066 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:52.409 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:52.410 -08 000000038 INF: ===================Camera TDI, Parallel===================
17-02-28 20:13:52.410 -08 000000030 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:13:52.410 -08 000000030 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:13:52.410 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:13:52.410 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:13:52.413 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:52.413 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:52.414 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:52.414 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:52.454 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:13:52.454 -08 000000066 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:52.454 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:52.518 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:13:52.518 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:52.563 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:52.563 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:52.565 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:52.565 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:52.580 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:13:52.580 -08 000000066 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:52.580 -08 000000066 INF: Y Motor: Set target position to 982729 encoder counts
17-02-28 20:13:52.580 -08 000000066 INF: Y Motor: Xmit s r0xca 982729\r
17-02-28 20:13:52.641 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:13:52.641 -08 000000066 INF: Y Motor: Start the move command
17-02-28 20:13:52.641 -08 000000066 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:52.703 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:13:52.703 -08 000000066 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:13:52.703 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:52.713 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:52.713 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:52.715 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:52.715 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:52.779 -08 000000085 INF: FPGA: Recv ZWAIT 
17-02-28 20:13:52.779 -08 000000051 INF: ======================================
17-02-28 20:13:52.830 -08 000000066 INF: Y Motor: Unshifted Position: 5885058
17-02-28 20:13:52.863 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:52.863 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:52.863 -08 000000064 INF: ===================Camera #2 Frame #5===================
17-02-28 20:13:52.865 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:52.865 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:52.865 -08 000000081 INF: ===================Camera #0 Frame #5===================
17-02-28 20:13:52.880 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:52.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:52.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 5 of 10 seconds left===================
17-02-28 20:13:53.003 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:53.037 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:13:53.037 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:13:53.037 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:13:53.037 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:13:53.037 -08 000000064 INF: ===================Camera #2 Frame #12===================
17-02-28 20:13:53.037 -08 000000081 INF: ===================Camera #0 Frame #12===================
17-02-28 20:13:53.141 -08 000000066 INF: Y Motor: Unshifted Position: 5680311
17-02-28 20:13:53.191 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:53.213 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:13:53.213 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:13:53.213 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:13:53.213 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:13:53.213 -08 000000064 INF: ===================Camera #2 Frame #18===================
17-02-28 20:13:53.213 -08 000000081 INF: ===================Camera #0 Frame #18===================
17-02-28 20:13:53.317 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:53.384 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:13:53.384 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:13:53.384 -08 000000064 INF: ===================Camera #2 Frame #24===================
17-02-28 20:13:53.390 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 24, frameCount = 25.
17-02-28 20:13:53.390 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 25
17-02-28 20:13:53.390 -08 000000081 INF: ===================Camera #0 Frame #25===================
17-02-28 20:13:53.452 -08 000000066 INF: Y Motor: Unshifted Position: 5478602
17-02-28 20:13:53.502 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:53.563 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:13:53.563 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:13:53.563 -08 000000064 INF: ===================Camera #2 Frame #31===================
17-02-28 20:13:53.570 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:13:53.570 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:13:53.570 -08 000000081 INF: ===================Camera #0 Frame #31===================
17-02-28 20:13:53.628 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:53.736 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:13:53.736 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:13:53.736 -08 000000064 INF: ===================Camera #2 Frame #37===================
17-02-28 20:13:53.739 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:13:53.739 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:13:53.739 -08 000000081 INF: ===================Camera #0 Frame #37===================
17-02-28 20:13:53.764 -08 000000066 INF: Y Motor: Unshifted Position: 5276444
17-02-28 20:13:53.814 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:53.914 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:13:53.914 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:13:53.914 -08 000000064 INF: ===================Camera #2 Frame #44===================
17-02-28 20:13:53.915 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:13:53.915 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:13:53.915 -08 000000081 INF: ===================Camera #0 Frame #44===================
17-02-28 20:13:53.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:53.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 4 of 10 seconds left===================
17-02-28 20:13:53.940 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.078 -08 000000066 INF: Y Motor: Unshifted Position: 5073428
17-02-28 20:13:54.091 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:13:54.091 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:13:54.091 -08 000000064 INF: ===================Camera #2 Frame #50===================
17-02-28 20:13:54.096 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51.
17-02-28 20:13:54.096 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51
17-02-28 20:13:54.096 -08 000000081 INF: ===================Camera #0 Frame #51===================
17-02-28 20:13:54.128 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.251 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.269 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:13:54.269 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:13:54.269 -08 000000064 INF: ===================Camera #2 Frame #57===================
17-02-28 20:13:54.277 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:13:54.277 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:13:54.277 -08 000000081 INF: ===================Camera #0 Frame #57===================
17-02-28 20:13:54.389 -08 000000066 INF: Y Motor: Unshifted Position: 4870629
17-02-28 20:13:54.439 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.441 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:13:54.441 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:13:54.441 -08 000000064 INF: ===================Camera #2 Frame #63===================
17-02-28 20:13:54.453 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64.
17-02-28 20:13:54.453 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64
17-02-28 20:13:54.453 -08 000000081 INF: ===================Camera #0 Frame #64===================
17-02-28 20:13:54.565 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.615 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:13:54.615 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:13:54.615 -08 000000064 INF: ===================Camera #2 Frame #70===================
17-02-28 20:13:54.632 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:13:54.632 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:13:54.632 -08 000000081 INF: ===================Camera #0 Frame #70===================
17-02-28 20:13:54.700 -08 000000066 INF: Y Motor: Unshifted Position: 4666964
17-02-28 20:13:54.750 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.791 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:13:54.791 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:13:54.791 -08 000000064 INF: ===================Camera #2 Frame #76===================
17-02-28 20:13:54.807 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:13:54.807 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:13:54.807 -08 000000081 INF: ===================Camera #0 Frame #77===================
17-02-28 20:13:54.877 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:54.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 3 of 10 seconds left===================
17-02-28 20:13:54.960 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:13:54.960 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:13:54.960 -08 000000064 INF: ===================Camera #2 Frame #82===================
17-02-28 20:13:54.979 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:13:54.979 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:13:54.979 -08 000000081 INF: ===================Camera #0 Frame #83===================
17-02-28 20:13:55.012 -08 000000066 INF: Y Motor: Unshifted Position: 4464150
17-02-28 20:13:55.062 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:55.129 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:13:55.129 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:13:55.129 -08 000000064 INF: ===================Camera #2 Frame #89===================
17-02-28 20:13:55.147 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:13:55.147 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:13:55.147 -08 000000081 INF: ===================Camera #0 Frame #89===================
17-02-28 20:13:55.188 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:55.301 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:13:55.301 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:13:55.301 -08 000000064 INF: ===================Camera #2 Frame #95===================
17-02-28 20:13:55.315 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:13:55.315 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:13:55.315 -08 000000081 INF: ===================Camera #0 Frame #95===================
17-02-28 20:13:55.326 -08 000000066 INF: Y Motor: Unshifted Position: 4261786
17-02-28 20:13:55.376 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:55.470 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:13:55.470 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:13:55.470 -08 000000064 INF: ===================Camera #2 Frame #101===================
17-02-28 20:13:55.484 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:13:55.484 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:13:55.484 -08 000000081 INF: ===================Camera #0 Frame #102===================
17-02-28 20:13:55.499 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:55.637 -08 000000066 INF: Y Motor: Unshifted Position: 4059624
17-02-28 20:13:55.639 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:13:55.639 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:13:55.639 -08 000000064 INF: ===================Camera #2 Frame #107===================
17-02-28 20:13:55.657 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:13:55.657 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:13:55.658 -08 000000081 INF: ===================Camera #0 Frame #108===================
17-02-28 20:13:55.687 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:55.808 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:13:55.808 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:13:55.808 -08 000000064 INF: ===================Camera #2 Frame #114===================
17-02-28 20:13:55.813 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:55.826 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:13:55.826 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:13:55.826 -08 000000081 INF: ===================Camera #0 Frame #114===================
17-02-28 20:13:55.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:55.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 2 of 10 seconds left===================
17-02-28 20:13:55.949 -08 000000066 INF: Y Motor: Unshifted Position: 3856613
17-02-28 20:13:55.981 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:13:55.981 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:13:55.981 -08 000000064 INF: ===================Camera #2 Frame #120===================
17-02-28 20:13:55.995 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:13:55.995 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:13:55.995 -08 000000081 INF: ===================Camera #0 Frame #120===================
17-02-28 20:13:55.999 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:56.125 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:56.151 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:13:56.151 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:13:56.151 -08 000000064 INF: ===================Camera #2 Frame #126===================
17-02-28 20:13:56.163 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:13:56.163 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:13:56.163 -08 000000081 INF: ===================Camera #0 Frame #127===================
17-02-28 20:13:56.261 -08 000000066 INF: Y Motor: Unshifted Position: 3652512
17-02-28 20:13:56.311 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:56.321 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:13:56.321 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:13:56.321 -08 000000064 INF: ===================Camera #2 Frame #132===================
17-02-28 20:13:56.335 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:13:56.335 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:13:56.335 -08 000000081 INF: ===================Camera #0 Frame #133===================
17-02-28 20:13:56.370 -08 000000090 INF: RunCopyService queue size at 2/28/2017 8:13:56 PM is 7
17-02-28 20:13:56.438 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:56.490 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:13:56.490 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:13:56.490 -08 000000064 INF: ===================Camera #2 Frame #139===================
17-02-28 20:13:56.504 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:13:56.504 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:13:56.504 -08 000000081 INF: ===================Camera #0 Frame #139===================
17-02-28 20:13:56.573 -08 000000066 INF: Y Motor: Unshifted Position: 3449493
17-02-28 20:13:56.623 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:56.662 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:13:56.662 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:13:56.662 -08 000000064 INF: ===================Camera #2 Frame #145===================
17-02-28 20:13:56.674 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:13:56.674 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:13:56.674 -08 000000081 INF: ===================Camera #0 Frame #145===================
17-02-28 20:13:56.749 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:56.831 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:13:56.831 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:13:56.831 -08 000000064 INF: ===================Camera #2 Frame #151===================
17-02-28 20:13:56.844 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:13:56.844 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:13:56.844 -08 000000081 INF: ===================Camera #0 Frame #152===================
17-02-28 20:13:56.887 -08 000000066 INF: Y Motor: Unshifted Position: 3247349
17-02-28 20:13:56.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:56.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 1 of 10 seconds left===================
17-02-28 20:13:56.937 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.000 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:13:57.000 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:13:57.000 -08 000000064 INF: ===================Camera #2 Frame #157===================
17-02-28 20:13:57.017 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:13:57.017 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:13:57.017 -08 000000081 INF: ===================Camera #0 Frame #158===================
17-02-28 20:13:57.060 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.169 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:13:57.169 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:13:57.169 -08 000000064 INF: ===================Camera #2 Frame #164===================
17-02-28 20:13:57.187 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:13:57.187 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:13:57.187 -08 000000081 INF: ===================Camera #0 Frame #164===================
17-02-28 20:13:57.198 -08 000000066 INF: Y Motor: Unshifted Position: 3044985
17-02-28 20:13:57.248 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.341 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:13:57.341 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:13:57.341 -08 000000064 INF: ===================Camera #2 Frame #170===================
17-02-28 20:13:57.356 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:13:57.356 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:13:57.356 -08 000000081 INF: ===================Camera #0 Frame #171===================
17-02-28 20:13:57.374 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.509 -08 000000066 INF: Y Motor: Unshifted Position: 2840673
17-02-28 20:13:57.510 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:13:57.510 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:13:57.510 -08 000000064 INF: ===================Camera #2 Frame #176===================
17-02-28 20:13:57.529 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:13:57.529 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:13:57.529 -08 000000081 INF: ===================Camera #0 Frame #177===================
17-02-28 20:13:57.559 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.679 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:13:57.679 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:13:57.679 -08 000000064 INF: ===================Camera #2 Frame #182===================
17-02-28 20:13:57.685 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.699 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:13:57.699 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:13:57.699 -08 000000081 INF: ===================Camera #0 Frame #183===================
17-02-28 20:13:57.821 -08 000000066 INF: Y Motor: Unshifted Position: 2638522
17-02-28 20:13:57.848 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:13:57.848 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:13:57.848 -08 000000064 INF: ===================Camera #2 Frame #189===================
17-02-28 20:13:57.869 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:13:57.869 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:13:57.869 -08 000000081 INF: ===================Camera #0 Frame #189===================
17-02-28 20:13:57.871 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:57.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:57.929 -08 000000042 INF: WaitCommand(10000) end
17-02-28 20:13:57.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:57.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:57.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:13:57.931 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:13:57.931 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:13:57.932 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:13:57.932 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:57.997 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:58.008 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:58.008 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB1 (4)===================
17-02-28 20:13:58.008 -08 000000042 INF: Valve B1: Go to position 4
17-02-28 20:13:58.008 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:13:58.020 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:13:58.020 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:13:58.020 -08 000000064 INF: ===================Camera #2 Frame #195===================
17-02-28 20:13:58.039 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:13:58.039 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:13:58.039 -08 000000081 INF: ===================Camera #0 Frame #196===================
17-02-28 20:13:58.085 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 7\r
17-02-28 20:13:58.085 -08 000000042 INF: Valve B1: 38.577 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:13:58.085 -08 000000042 INF: Valve B1: Taking shortest path 'CC' from 7 to 4
17-02-28 20:13:58.085 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CC4\r
17-02-28 20:13:58.085 -08 000000042 INF: SerialPort B1 (VICIB1): Recv  (discarded)
17-02-28 20:13:58.085 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:13:58.135 -08 000000066 INF: Y Motor: Unshifted Position: 2435515
17-02-28 20:13:58.185 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:58.189 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:13:58.189 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:13:58.189 -08 000000064 INF: ===================Camera #2 Frame #201===================
17-02-28 20:13:58.213 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:13:58.213 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:13:58.213 -08 000000081 INF: ===================Camera #0 Frame #202===================
17-02-28 20:13:58.308 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:58.358 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:13:58.358 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:13:58.358 -08 000000064 INF: ===================Camera #2 Frame #207===================
17-02-28 20:13:58.383 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:13:58.383 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:13:58.383 -08 000000081 INF: ===================Camera #0 Frame #208===================
17-02-28 20:13:58.446 -08 000000066 INF: Y Motor: Unshifted Position: 2233361
17-02-28 20:13:58.496 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:58.522 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 4\r
17-02-28 20:13:58.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:13:58.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-02-28 20:13:58.527 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:13:58.527 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:13:58.527 -08 000000064 INF: ===================Camera #2 Frame #214===================
17-02-28 20:13:58.553 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:13:58.553 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:13:58.553 -08 000000081 INF: ===================Camera #0 Frame #215===================
17-02-28 20:13:58.619 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:58.699 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:13:58.699 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:13:58.699 -08 000000064 INF: ===================Camera #2 Frame #220===================
17-02-28 20:13:58.726 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:13:58.726 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:13:58.726 -08 000000081 INF: ===================Camera #0 Frame #221===================
17-02-28 20:13:58.757 -08 000000066 INF: Y Motor: Unshifted Position: 2029042
17-02-28 20:13:58.807 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:58.868 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:13:58.868 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:13:58.868 -08 000000064 INF: ===================Camera #2 Frame #226===================
17-02-28 20:13:58.895 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:13:58.895 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:13:58.895 -08 000000081 INF: ===================Camera #0 Frame #227===================
17-02-28 20:13:58.931 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.037 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:13:59.037 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:13:59.037 -08 000000064 INF: ===================Camera #2 Frame #232===================
17-02-28 20:13:59.066 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:13:59.066 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:13:59.066 -08 000000081 INF: ===================Camera #0 Frame #233===================
17-02-28 20:13:59.069 -08 000000066 INF: Y Motor: Unshifted Position: 1826243
17-02-28 20:13:59.119 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.206 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:13:59.206 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:13:59.206 -08 000000064 INF: ===================Camera #2 Frame #239===================
17-02-28 20:13:59.207 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:13:59.207 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:13:59.207 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:59.236 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:13:59.236 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:13:59.236 -08 000000081 INF: ===================Camera #0 Frame #240===================
17-02-28 20:13:59.245 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.256 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:59.264 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 4, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 80, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:13:59.356 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:13:59.378 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:13:59.378 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:13:59.378 -08 000000064 INF: ===================Camera #2 Frame #245===================
17-02-28 20:13:59.382 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:13:59.382 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:13:59.383 -08 000000066 INF: Y Motor: Unshifted Position: 1623873
17-02-28 20:13:59.409 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:13:59.409 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:13:59.409 -08 000000081 INF: ===================Camera #0 Frame #246===================
17-02-28 20:13:59.433 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.482 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:13:59.547 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:13:59.547 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:13:59.547 -08 000000064 INF: ===================Camera #2 Frame #251===================
17-02-28 20:13:59.556 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.567 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:59.579 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:13:59.579 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:13:59.579 -08 000000081 INF: ===================Camera #0 Frame #252===================
17-02-28 20:13:59.667 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:59.694 -08 000000066 INF: Y Motor: Unshifted Position: 1421720
17-02-28 20:13:59.716 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:13:59.716 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:13:59.716 -08 000000064 INF: ===================Camera #2 Frame #257===================
17-02-28 20:13:59.744 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.749 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:13:59.749 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:13:59.749 -08 000000081 INF: ===================Camera #0 Frame #259===================
17-02-28 20:13:59.755 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:59.867 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.885 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:13:59.885 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:13:59.885 -08 000000064 INF: ===================Camera #2 Frame #264===================
17-02-28 20:13:59.922 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:13:59.922 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:13:59.922 -08 000000081 INF: ===================Camera #0 Frame #265===================
17-02-28 20:14:00.005 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:00.005 -08 000000066 INF: Y Motor: Unshifted Position: 1217403
17-02-28 20:14:00.055 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:00.059 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:14:00.059 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:14:00.059 -08 000000064 INF: ===================Camera #2 Frame #270===================
17-02-28 20:14:00.066 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:00.090 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:14:00.090 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:14:00.090 -08 000000081 INF: ===================Camera #0 Frame #271===================
17-02-28 20:14:00.145 -08 000000037 INF: FPGA: Recv TDIYWAIT
17-02-28 20:14:00.145 -08 000000030 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:00.147 -08 000000030 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:14:00.148 -08 000000047 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:14:00.148 -08 000000062 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:14:00.148 -08 000000047 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:14:00.148 -08 000000047 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:14:00.148 -08 000000047 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:14:00.148 -08 000000062 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:14:00.148 -08 000000062 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:14:00.148 -08 000000062 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:14:00.148 -08 000000047 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:14:00.149 -08 000000062 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:14:00.166 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:14:00.181 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:00.230 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:00.230 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:00.230 -08 000000064 INF: ===================Camera #2 Frame #272===================
17-02-28 20:14:00.237 -08 000000064 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:00.238 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:00.254 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:00.319 -08 000000066 INF: Y Motor: Unshifted Position: 1015257
17-02-28 20:14:00.354 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:00.369 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:00.406 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:14:00.406 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:00.406 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:00.406 -08 000000081 INF: ===================Camera #0 Frame #272===================
17-02-28 20:14:00.406 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:14:00.409 -08 000000081 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:00.410 -08 000000081 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:00.439 -08 000000064 INF: ======================================
17-02-28 20:14:00.441 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:00.441 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB===================
17-02-28 20:14:00.505 -08 000000066 INF: Y Motor: Unshifted Position: 982729
17-02-28 20:14:00.505 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:00.505 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:00.518 -08 000000085 INF: FPGA: Recv EX1MV
17-02-28 20:14:00.518 -08 000000047 INF: Excitation Filter 1: Moved 107 steps in 369.9031 ms
17-02-28 20:14:00.518 -08 000000047 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.0146 ms
17-02-28 20:14:00.518 -08 000000047 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.0883 ms
17-02-28 20:14:00.518 -08 000000047 INF: ======================================
17-02-28 20:14:00.541 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V1600IP15360R\r
17-02-28 20:14:00.545 -08 000000081 INF: Camera #0 ReleaseBuffer
17-02-28 20:14:00.545 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:00.595 -08 000000055 INF: FPGA: Recv EX2MV
17-02-28 20:14:00.595 -08 000000062 INF: Excitation Filter 2: Moved 107 steps in 446.7982 ms
17-02-28 20:14:00.595 -08 000000062 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 446.9088 ms
17-02-28 20:14:00.595 -08 000000062 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 447.0233 ms
17-02-28 20:14:00.596 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:00.596 -08 000000062 INF: ======================================
17-02-28 20:14:00.597 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:14:00.597 -08 000000066 INF: Y Motor: Moved to 14.8273 after 7893 ms
17-02-28 20:14:00.597 -08 000000066 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:00.597 -08 000000030 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:00.598 -08 000000030 INF: ======================================
17-02-28 20:14:00.619 -08 000000081 INF: ======================================
17-02-28 20:14:00.620 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:14:00.622 -08 000000038 INF: ======================================
17-02-28 20:14:00.647 -08 000000066 INF: Y Motor: Recv v 4097\r
17-02-28 20:14:00.647 -08 000000066 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:00.647 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:00.696 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:00.707 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:14:00.707 -08 000000066 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:00.707 -08 000000066 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:00.769 -08 000000066 INF: Y Motor: Recv v 134217728\r
17-02-28 20:14:00.769 -08 000000066 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:14:00.769 -08 000000066 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:00.769 -08 000000066 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:00.786 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:00.833 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:14:00.833 -08 000000066 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:00.833 -08 000000066 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:00.833 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:00.896 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:14:00.896 -08 000000066 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:00.896 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:00.958 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:14:00.958 -08 000000066 INF: ======================================
17-02-28 20:14:00.959 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:00.960 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:00.961 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:00.961 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:14:00.971 -08 000000102 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:14:00.971 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:01.032 -08 000000101 INF: FPGA: Recv TDIYERD 1482730
17-02-28 20:14:01.032 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:14:01.036 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:01.097 -08 000000051 INF: FPGA: Recv ZADCR 31086
17-02-28 20:14:01.097 -08 000000018 INF: At scan end Y pos = 14.827 and Z pos = -0.119. Y moved -48.539 mm
17-02-28 20:14:01.097 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:14:01.098 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:01.159 -08 000000081 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:14:01.159 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:14:01.159 -08 000000018 INF: TDIScan finished after 12499.0874 ms
17-02-28 20:14:01.159 -08 000000018 INF: Image[0]: Y should trigger at 63.366 mm, 2nd row was at 64.275 mm (error = 0.909 mm)
17-02-28 20:14:01.159 -08 000000018 INF: Image[2]: Y should trigger at 63.366 mm, 2nd row was at 64.275 mm (error = 0.909 mm)
17-02-28 20:14:01.161 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.195 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.110 um
17-02-28 20:14:01.195 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.196 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:14:01.220 -08 000000086 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:14:01.220 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.221 -08 000000106 INF: ===================Dither Clean Up Command===================
17-02-28 20:14:01.221 -08 000000044 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:14:01.221 -08 000000104 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:14:01.221 -08 000000058 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:14:01.222 -08 000000058 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:14:01.222 -08 000000044 INF: ======================================
17-02-28 20:14:01.222 -08 000000058 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:14:01.222 -08 000000104 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:01.222 -08 000000104 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:01.222 -08 000000066 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:01.222 -08 000000087 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:01.223 -08 000000066 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:14:01.225 -08 000000087 INF: ===================LFT:Extracting coords===================
17-02-28 20:14:01.251 -08 000000087 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:01.251 -08 000000087 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:14:01.252 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.252 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.252 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.253 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.253 -08 000000081 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:01.253 -08 000000095 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:01.253 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:01.253 -08 000000034 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:01.269 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:14:01.269 -08 000000104 INF: ======================================
17-02-28 20:14:01.282 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:01.282 -08 000000101 INF: FPGA: Recv ZSEL 
17-02-28 20:14:01.282 -08 000000066 INF: FPGA: Xmit ZDACW 31690\n
17-02-28 20:14:01.282 -08 000000058 INF: ======================================
17-02-28 20:14:01.327 -08 000000081 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:01.327 -08 000000032 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:01.327 -08 000000095 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:01.327 -08 000000034 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:01.345 -08 000000064 INF: FPGA: Recv ZDACW 
17-02-28 20:14:01.346 -08 000000066 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:14:01.346 -08 000000066 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:14:01.348 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:01.407 -08 000000062 INF: FPGA: Recv TDIBB
17-02-28 20:14:01.407 -08 000000066 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:01.408 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:01.408 -08 000000066 INF: ======================================
17-02-28 20:14:01.478 -08 000000081 INF: LFT found best fwhm score 2.000008 in 151 ms
17-02-28 20:14:01.478 -08 000000081 INF: LFT found good score at index 45 with fwhm value 2.000008. Next cycle, cycle 4 starting Z position for top surface is at -0.125 mm FC:A, C:3,L:3,T
17-02-28 20:14:01.478 -08 000000032 INF: LFT found best fwhm score 2.159854 in 151 ms
17-02-28 20:14:01.478 -08 000000032 INF: LFT found good score at index 6817 with fwhm value 2.159854. Next cycle, cycle 4 starting Z position for top surface is at -0.124 mm FC:A, C:3,L:3,T
17-02-28 20:14:01.478 -08 000000095 INF: LFT found best fwhm score 2.000595 in 151 ms
17-02-28 20:14:01.478 -08 000000095 INF: LFT found good score at index 4929 with fwhm value 2.000595. Next cycle, cycle 4 starting Z position for top surface is at -0.125 mm FC:A, C:3,L:3,T
17-02-28 20:14:01.478 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.478 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.479 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.479 -08 000000034 INF: LFT found best fwhm score 2.000003 in 152 ms
17-02-28 20:14:01.479 -08 000000081 INF: ======================================
17-02-28 20:14:01.479 -08 000000034 INF: LFT found good score at index 7857 with fwhm value 2.000003. Next cycle, cycle 4 starting Z position for top surface is at -0.124 mm FC:A, C:3,L:3,T
17-02-28 20:14:01.479 -08 000000032 INF: ======================================
17-02-28 20:14:01.479 -08 000000095 INF: ======================================
17-02-28 20:14:01.479 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.479 -08 000000034 INF: ======================================
17-02-28 20:14:01.480 -08 000000087 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:01.481 -08 000000087 INF: LFT weighted average best Z for top surface is at -0.124mm FC:A, C:3,L:3,T
17-02-28 20:14:01.481 -08 000000087 INF: ======================================
17-02-28 20:14:01.482 -08 000000106 INF: ======================================
17-02-28 20:14:01.483 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.484 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:14:01.484 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.484 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:14:01.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:14:01.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:14:01.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011===================
17-02-28 20:14:01.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011===================
17-02-28 20:14:01.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:14:01.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011===================
17-02-28 20:14:01.487 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:14:01.487 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB===================
17-02-28 20:14:01.509 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:14:01.510 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:14:01.510 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:14:01.510 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:01.510 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:14:01.511 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:14:01.511 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:14:01.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:01.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:01.528 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:01.528 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:01.553 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":3,"Tile":1205,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF227","HCSMMF277","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.616 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:01.617 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:01.618 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:14:01.618 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:14:01.626 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":3,"Tile":1204,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF276","HCSMMF287","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.700 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:01.708 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":3,"Tile":1201,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF255","HCSMMF235","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.715 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":3,"Tile":1202,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF181","HCSMMF271","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.718 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":3,"Tile":1203,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF238","HCSMMF207","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.720 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":3,"Tile":1207,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF222","HCSMMF264","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.722 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":3,"Tile":1209,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF275","HCSMMF234","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.724 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":3,"Tile":1212,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF251","HCSMMF281","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.726 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":3,"Tile":1214,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF278","HCSMMF180","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.732 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":3,"Tile":1208,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF246","HCSMMF223","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.733 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":3,"Tile":1215,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF260","HCSMMF187","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.734 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":3,"Tile":1210,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF208","HCSMMF236","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.746 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":3,"Tile":1213,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF205","HCSMMF263","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.749 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":3,"Tile":1206,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF286","HCSMMF219","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.751 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:01.751 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":3,"Tile":1216,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF273","HCSMMF210","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.752 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":3,"Tile":1211,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF195","HCSMMF261","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.755 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":3,"Tile":1220,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF256","HCSMMF185","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.759 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":3,"Tile":1219,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF244","HCSMMF284","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.761 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":3,"Tile":1218,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF221","HCSMMF224","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.765 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":3,"Tile":1217,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF177","HCSMMF186","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.767 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":3,"Tile":1223,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF196","HCSMMF203","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.775 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":3,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF245","HCSMMF242","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.777 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":3,"Tile":1221,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF243","HCSMMF257","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.778 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":3,"Tile":1224,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF266","HCSMMF199","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.780 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":3,"Tile":1228,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF231","HCSMMF212","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.781 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":3,"Tile":1222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF265","HCSMMF240","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.783 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":3,"Tile":1225,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF201","HCSMMF200","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.786 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":3,"Tile":1227,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF241","HCSMMF280","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.788 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:01.794 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:14:01.899 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:01.899 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:14:01.936 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:01.942 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:14:02.000 -08 000000055 INF: FPGA: Recv MIOCOMPR
17-02-28 20:14:02.000 -08 000000018 INF: Compensator: Moved OutOfPath in 382 ms
17-02-28 20:14:02.000 -08 000000018 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:14:02.001 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:02.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:02.003 -08 000000050 INF: ===================Move Tilt Motor 1===================
17-02-28 20:14:02.003 -08 000000098 INF: ===================Move Tilt Motor 3===================
17-02-28 20:14:02.003 -08 000000087 INF: ===================Move Tilt Motor 2===================
17-02-28 20:14:02.003 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:02.003 -08 000000050 INF: ======================================
17-02-28 20:14:02.004 -08 000000087 INF: ======================================
17-02-28 20:14:02.004 -08 000000098 INF: ======================================
17-02-28 20:14:02.006 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:02.006 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:02.013 -08 000000018 INF: Transformed XStagePosition from 14.43393 mm to 14.4339303970337 mm.
17-02-28 20:14:02.023 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:14:02.023 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:14:02.023 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:14:02.023 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:02.023 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:02.027 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:14:02.027 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:14:02.027 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:14:02.029 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:02.035 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:14:02.064 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:02.064 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:02.065 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:02.065 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:14:02.065 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1209 mm
17-02-28 20:14:02.065 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:14:02.126 -08 000000044 INF: FPGA: Recv ZTRG 
17-02-28 20:14:02.126 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:14:02.187 -08 000000069 INF: FPGA: Recv ZYT 
17-02-28 20:14:02.187 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:14:02.187 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:14:02.189 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:02.195 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:14:02.251 -08 000000076 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:14:02.251 -08 000000076 INF: FPGA: Recv ZMV 
17-02-28 20:14:02.251 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:14:02.251 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 64.164 ms
17-02-28 20:14:02.251 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:14:02.293 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:02.313 -08 000000047 INF: FPGA: Recv ZDACR 60292
17-02-28 20:14:02.313 -08 000000018 INF: Z Motor: MoveAndTrigger took 248.2245 ms w/comms
17-02-28 20:14:02.313 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:14:02.313 -08 000000018 INF: Z Motor: MoveAbsStepped took 248.5066 ms
17-02-28 20:14:02.314 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:02.314 -08 000000018 INF: Transformed XStagePosition from 14.43393 mm to 14.4339303970337 mm.
17-02-28 20:14:02.315 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:02.323 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:14:02.324 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:02.324 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:02.324 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:14:02.324 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:14:02.374 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:02.376 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:02.385 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:02.385 -08 000000018 INF: Transformed XStagePosition from 14.43393 mm to 14.4339303970337 mm.
17-02-28 20:14:02.393 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:14:02.393 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:02.393 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:02.395 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:02.396 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:14:02.396 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:02.396 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = D_1
17-02-28 20:14:02.396 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:02.397 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:02.398 -08 000000030 INF: ===================MoveEmissionFilters===================
17-02-28 20:14:02.398 -08 000000104 INF: ===================Move X,Y===================
17-02-28 20:14:02.399 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:02.399 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:02.399 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:02.399 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:02.399 -08 000000104 INF: ===================Move X,Y, Parallel===================
17-02-28 20:14:02.399 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:02.399 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:02.400 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:02.400 -08 000000055 INF: ===================Move X Motor without settling===================
17-02-28 20:14:02.400 -08 000000086 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:02.400 -08 000000055 INF: X Motor: Xmit PR VM\n
17-02-28 20:14:02.400 -08 000000086 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8273 mm
17-02-28 20:14:02.400 -08 000000086 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:02.400 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:02.400 -08 000000029 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:14:02.400 -08 000000089 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:14:02.400 -08 000000090 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:14:02.400 -08 000000032 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:14:02.400 -08 000000089 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:14:02.400 -08 000000108 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:14:02.401 -08 000000076 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:14:02.401 -08 000000029 INF: ======================================
17-02-28 20:14:02.401 -08 000000076 INF: ======================================
17-02-28 20:14:02.401 -08 000000032 INF: ======================================
17-02-28 20:14:02.402 -08 000000090 INF: ======================================
17-02-28 20:14:02.402 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:02.403 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:02.403 -08 000000032 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:14:02.403 -08 000000087 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:14:02.404 -08 000000087 INF: ======================================
17-02-28 20:14:02.404 -08 000000089 INF: ======================================
17-02-28 20:14:02.404 -08 000000052 INF: ======================================
17-02-28 20:14:02.404 -08 000000032 INF: ======================================
17-02-28 20:14:02.405 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:02.406 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:02.406 -08 000000108 INF: ======================================
17-02-28 20:14:02.406 -08 000000047 INF: ======================================
17-02-28 20:14:02.407 -08 000000109 INF: ======================================
17-02-28 20:14:02.408 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:02.409 -08 000000066 INF: ======================================
17-02-28 20:14:02.410 -08 000000030 INF: ======================================
17-02-28 20:14:02.438 -08 000000055 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:14:02.438 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:14:02.438 -08 000000086 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:02.438 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:02.438 -08 000000055 INF: X Motor: Xmit PR VI\n
17-02-28 20:14:02.502 -08 000000055 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:14:02.502 -08 000000055 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:14:02.502 -08 000000055 INF: X Motor: Moving to 14.4339 mm @15.000 mm/sec, started at 12.2349 mm
17-02-28 20:14:02.502 -08 000000055 INF: X Motor: Xmit MA -18254\n
17-02-28 20:14:02.504 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:14:02.504 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:02.564 -08 000000055 INF: X Motor: Recv MA -18254\r\n>
17-02-28 20:14:02.564 -08 000000055 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:14:02.566 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:14:02.566 -08 000000086 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:02.566 -08 000000086 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:14:02.566 -08 000000086 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:14:02.575 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:14:02.626 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:14:02.626 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:02.626 -08 000000086 INF: Y Motor: Start the move command
17-02-28 20:14:02.626 -08 000000086 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:02.688 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:14:02.688 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:02.688 -08 000000086 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:14:02.688 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:02.812 -08 000000086 INF: Y Motor: Unshifted Position: 1063785
17-02-28 20:14:02.862 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:02.938 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:02.989 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.000 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:03.124 -08 000000086 INF: Y Motor: Unshifted Position: 1776905
17-02-28 20:14:03.174 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.190 -08 000000055 INF: X Motor: Xmit PR ER\n
17-02-28 20:14:03.249 -08 000000055 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:14:03.249 -08 000000055 INF: X Motor: Moved to 14.4346 after 685 ms
17-02-28 20:14:03.249 -08 000000055 INF: ======================================
17-02-28 20:14:03.250 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:03.299 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.313 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:03.439 -08 000000086 INF: Y Motor: Unshifted Position: 2557758
17-02-28 20:14:03.489 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.563 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:03.615 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.624 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:03.751 -08 000000086 INF: Y Motor: Unshifted Position: 3332700
17-02-28 20:14:03.801 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.874 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:03.924 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.935 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:04.062 -08 000000086 INF: Y Motor: Unshifted Position: 4115264
17-02-28 20:14:04.112 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:04.185 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:04.235 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:04.249 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:04.374 -08 000000086 INF: Y Motor: Unshifted Position: 4896028
17-02-28 20:14:04.424 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:04.499 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:04.547 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:04.559 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:04.686 -08 000000086 INF: Y Motor: Unshifted Position: 5669802
17-02-28 20:14:04.736 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:04.809 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:04.860 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:04.874 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:04.997 -08 000000086 INF: Y Motor: Unshifted Position: 5947057
17-02-28 20:14:04.997 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:04.997 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:05.059 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:14:05.059 -08 000000086 INF: Y Motor: Moved to 64.4706 after 2371 ms
17-02-28 20:14:05.059 -08 000000086 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:05.124 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:05.124 -08 000000086 INF: Y Motor: Recv v 4096\r
17-02-28 20:14:05.124 -08 000000086 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:05.124 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:05.184 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:05.185 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:14:05.185 -08 000000086 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:05.185 -08 000000086 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:05.247 -08 000000086 INF: Y Motor: Recv v 402653184\r
17-02-28 20:14:05.247 -08 000000086 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:14:05.247 -08 000000086 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:05.247 -08 000000086 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:05.309 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:14:05.309 -08 000000086 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:05.309 -08 000000086 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:05.309 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:05.372 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:14:05.372 -08 000000086 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:05.372 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:05.437 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:05.440 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:14:05.440 -08 000000086 INF: ======================================
17-02-28 20:14:05.441 -08 000000104 INF: ===================Move X,Y===================
17-02-28 20:14:05.443 -08 000000104 INF: ======================================
17-02-28 20:14:05.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:05.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:05.445 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:14:05.445 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:14:05.498 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:05.499 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:05.499 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:14:05.558 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:14:05.558 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:14:05.559 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:05.559 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:05.620 -08 000000030 INF: FPGA: Recv TDIYERD 6447056
17-02-28 20:14:05.620 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447056 counts (64.471 mm)
17-02-28 20:14:05.621 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:05.622 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:05.622 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:14:05.623 -08 000000108 INF: ===================Set YMotor gains for scans===================
17-02-28 20:14:05.623 -08 000000108 INF: ======================================
17-02-28 20:14:05.623 -08 000000085 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:14:05.624 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:14:05.625 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:14:05.626 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:14:05.626 -08 000000085 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:14:05.682 -08 000000100 INF: FPGA: Recv TDIYPOS
17-02-28 20:14:05.682 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:14:05.684 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:14:05.684 -08 000000085 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:14:05.745 -08 000000057 INF: FPGA: Recv TDIYARM2
17-02-28 20:14:05.746 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:14:05.748 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:05.748 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:14:05.750 -08 000000085 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:14:05.750 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:14:05.753 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:14:05.754 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:14:05.755 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:05.808 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:06.058 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:06.120 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:06.127 -08 000000085 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:14:06.127 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:14:06.127 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:06.142 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:14:06.144 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:06.371 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:06.432 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:06.533 -08 000000085 INF: Camera #2 AttachBuffer (imageDataPtr = 53955604608 imgPtr = 54022574152 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:14:06.534 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:14:06.534 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:06.549 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:14:06.551 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:14:06.552 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:14:06.553 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:06.554 -08 000000085 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:14:06.554 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:06.556 -08 000000085 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:14:06.556 -08 000000085 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:14:06.556 -08 000000085 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:14:06.556 -08 000000085 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:14:06.619 -08 000000076 INF: FPGA: Recv ZYT 
17-02-28 20:14:06.619 -08 000000085 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:14:06.619 -08 000000085 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:14:06.681 -08 000000066 INF: FPGA: Recv ZARM
17-02-28 20:14:06.681 -08 000000085 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8477 ms
17-02-28 20:14:06.681 -08 000000085 INF: Z Motor: ArmAbsStepped took 124.9864 ms
17-02-28 20:14:06.682 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:06.682 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:06.684 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:14:06.686 -08 000000085 INF: ======================================
17-02-28 20:14:06.687 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:06.688 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:06.688 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:06.689 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:06.689 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:06.690 -08 000000089 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:14:06.691 -08 000000089 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:14:06.691 -08 000000089 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:14:06.691 -08 000000089 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:14:06.691 -08 000000089 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:14:06.691 -08 000000104 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:14:06.691 -08 000000104 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:14:06.691 -08 000000104 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:14:06.691 -08 000000104 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:14:06.692 -08 000000104 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:14:06.745 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:06.995 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:07.055 -08 000000037 INF: FPGA: Recv EX1MV
17-02-28 20:14:07.055 -08 000000037 INF: FPGA: Recv EX2MV
17-02-28 20:14:07.055 -08 000000089 INF: Excitation Filter 1: Moved -107 steps in 364.2664 ms
17-02-28 20:14:07.055 -08 000000104 INF: Excitation Filter 2: Moved -107 steps in 363.8379 ms
17-02-28 20:14:07.055 -08 000000089 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 364.4022 ms
17-02-28 20:14:07.055 -08 000000089 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 364.5116 ms
17-02-28 20:14:07.055 -08 000000104 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 364.0303 ms
17-02-28 20:14:07.055 -08 000000104 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 364.1589 ms
17-02-28 20:14:07.055 -08 000000089 INF: ======================================
17-02-28 20:14:07.056 -08 000000104 INF: ======================================
17-02-28 20:14:07.057 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:07.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:07.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:07.060 -08 000000050 INF: ===================Serial===================
17-02-28 20:14:07.060 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:14:07.061 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:07.061 -08 000000064 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:07.061 -08 000000050 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:14:07.061 -08 000000064 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:14:07.061 -08 000000050 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:14:07.061 -08 000000064 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:07.061 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:07.062 -08 000000086 INF: ===================Camera TDI, Parallel===================
17-02-28 20:14:07.062 -08 000000038 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:14:07.062 -08 000000038 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:14:07.063 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:14:07.063 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:14:07.063 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.063 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.064 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.064 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.119 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:14:07.119 -08 000000064 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:07.119 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:07.183 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:14:07.183 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:07.214 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.214 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.214 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.214 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.245 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:14:07.245 -08 000000064 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:07.245 -08 000000064 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:14:07.245 -08 000000064 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:14:07.307 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:07.308 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:14:07.308 -08 000000064 INF: Y Motor: Start the move command
17-02-28 20:14:07.308 -08 000000064 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:07.364 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.364 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.364 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.364 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.369 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:07.370 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:14:07.370 -08 000000064 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:14:07.370 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:07.494 -08 000000064 INF: Y Motor: Unshifted Position: 5929033
17-02-28 20:14:07.514 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.514 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.514 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.514 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.544 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:07.619 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:07.664 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:14:07.664 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:14:07.664 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:14:07.664 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:14:07.664 -08 000000066 INF: ===================Camera #0 Frame #1===================
17-02-28 20:14:07.664 -08 000000052 INF: ===================Camera #2 Frame #1===================
17-02-28 20:14:07.668 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:07.679 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:07.806 -08 000000064 INF: Y Motor: Unshifted Position: 5882226
17-02-28 20:14:07.819 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:14:07.819 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:14:07.819 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:14:07.819 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:14:07.819 -08 000000052 INF: ===================Camera #2 Frame #3===================
17-02-28 20:14:07.819 -08 000000066 INF: ===================Camera #0 Frame #3===================
17-02-28 20:14:07.856 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:07.929 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:07.975 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:07.975 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:14:07.975 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:07.975 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:14:07.975 -08 000000052 INF: ===================Camera #2 Frame #4===================
17-02-28 20:14:07.975 -08 000000066 INF: ===================Camera #0 Frame #4===================
17-02-28 20:14:07.982 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:07.991 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:08.119 -08 000000064 INF: Y Motor: Unshifted Position: 5835225
17-02-28 20:14:08.128 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:08.128 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:08.128 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:08.128 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:08.128 -08 000000066 INF: ===================Camera #0 Frame #5===================
17-02-28 20:14:08.128 -08 000000052 INF: ===================Camera #2 Frame #5===================
17-02-28 20:14:08.169 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:08.179 -08 000000098 INF: FPGA: Recv ZWAIT 
17-02-28 20:14:08.179 -08 000000098 INF: FPGA: Recv TDIYWAIT
17-02-28 20:14:08.179 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:08.180 -08 000000050 INF: ===================Serial===================
17-02-28 20:14:08.181 -08 000000038 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:14:08.182 -08 000000050 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:14:08.182 -08 000000050 INF: ===================Serial===================
17-02-28 20:14:08.182 -08 000000032 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:14:08.183 -08 000000032 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:14:08.183 -08 000000032 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:14:08.183 -08 000000032 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:14:08.183 -08 000000032 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:14:08.183 -08 000000095 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:14:08.183 -08 000000095 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:14:08.183 -08 000000095 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:14:08.183 -08 000000095 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:14:08.183 -08 000000050 INF: ======================================
17-02-28 20:14:08.189 -08 000000095 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:14:08.241 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:08.282 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:14:08.282 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:14:08.282 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:14:08.282 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:14:08.282 -08 000000066 INF: ===================Camera #0 Frame #6===================
17-02-28 20:14:08.282 -08 000000052 INF: ===================Camera #2 Frame #6===================
17-02-28 20:14:08.285 -08 000000066 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:14:08.285 -08 000000052 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:14:08.286 -08 000000052 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:08.289 -08 000000066 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:08.293 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:08.304 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:08.312 -08 000000052 INF: Camera #2 ReleaseBuffer
17-02-28 20:14:08.312 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:14:08.313 -08 000000052 INF: ======================================
17-02-28 20:14:08.336 -08 000000066 INF: Camera #0 ReleaseBuffer
17-02-28 20:14:08.336 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:14:08.337 -08 000000066 INF: ======================================
17-02-28 20:14:08.339 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:14:08.340 -08 000000086 INF: ======================================
17-02-28 20:14:08.431 -08 000000064 INF: Y Motor: Unshifted Position: 5790759
17-02-28 20:14:08.481 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:08.554 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:08.555 -08 000000037 INF: FPGA: Recv EX1MV
17-02-28 20:14:08.555 -08 000000037 INF: FPGA: Recv EX2MV
17-02-28 20:14:08.555 -08 000000095 INF: Excitation Filter 2: Moved 107 steps in 371.5295 ms
17-02-28 20:14:08.555 -08 000000032 INF: Excitation Filter 1: Moved 107 steps in 372.1879 ms
17-02-28 20:14:08.555 -08 000000095 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.6774 ms
17-02-28 20:14:08.555 -08 000000095 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.8705 ms
17-02-28 20:14:08.555 -08 000000032 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.3549 ms
17-02-28 20:14:08.555 -08 000000032 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.5316 ms
17-02-28 20:14:08.555 -08 000000095 INF: ======================================
17-02-28 20:14:08.555 -08 000000032 INF: ======================================
17-02-28 20:14:08.557 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:08.558 -08 000000038 INF: ======================================
17-02-28 20:14:08.619 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:08.619 -08 000000064 INF: Y Motor: Unshifted Position: 5790745
17-02-28 20:14:08.619 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:08.619 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:08.679 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:14:08.679 -08 000000064 INF: Y Motor: Moved to 62.9075 after 1309 ms
17-02-28 20:14:08.679 -08 000000064 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:08.741 -08 000000064 INF: Y Motor: Recv v 4097\r
17-02-28 20:14:08.741 -08 000000064 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:08.741 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:08.805 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:14:08.805 -08 000000064 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:08.805 -08 000000064 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:08.867 -08 000000064 INF: Y Motor: Recv v 134217728\r
17-02-28 20:14:08.867 -08 000000064 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:14:08.867 -08 000000064 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:08.867 -08 000000064 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:08.869 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:08.930 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:14:08.930 -08 000000064 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:08.930 -08 000000064 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:08.930 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:08.930 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:08.995 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:14:08.995 -08 000000064 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:08.995 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:09.053 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:14:09.053 -08 000000064 INF: ======================================
17-02-28 20:14:09.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:09.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:09.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.057 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:14:09.116 -08 000000051 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:14:09.116 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:09.178 -08 000000081 INF: FPGA: Recv TDIYERD 6290746
17-02-28 20:14:09.178 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:14:09.180 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:09.239 -08 000000101 INF: FPGA: Recv ZADCR 2426
17-02-28 20:14:09.239 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:14:09.239 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:14:09.240 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:09.301 -08 000000081 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:14:09.301 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:14:09.301 -08 000000018 INF: TDIScan finished after 6915.6263 ms
17-02-28 20:14:09.301 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:14:09.301 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:14:09.301 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:14:09.365 -08 000000057 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:14:09.366 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.366 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.367 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:14:09.367 -08 000000038 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:14:09.367 -08 000000058 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:14:09.368 -08 000000086 INF: ======================================
17-02-28 20:14:09.368 -08 000000038 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:09.368 -08 000000038 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:09.368 -08 000000058 INF: ======================================
17-02-28 20:14:09.429 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:14:09.429 -08 000000038 INF: ======================================
17-02-28 20:14:09.430 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.431 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.432 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:14:09.458 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.458 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:14:09.490 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:09.538 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.539 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:14:09.556 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:09.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:14:09.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:09.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:09.630 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:14:09.637 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:09.638 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:14:09.638 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:14:09.806 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:09.863 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:10.113 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:10.176 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:10.272 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:14:10.295 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0549773124794038Best Z position at top surface = -0.125619153844204Best Z position at top surface + compensator offset = -0.102919153844204 C:3,L:4,T
17-02-28 20:14:10.296 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.125619153844204
17-02-28 20:14:10.296 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.74837
17-02-28 20:14:10.296 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0549773124794038
17-02-28 20:14:10.296 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.4082
17-02-28 20:14:10.296 -08 000000018 INF: Z-height at LaneTopSurface is -0.125619153844204.
17-02-28 20:14:10.296 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:10.426 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:10.429 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:14:10.429 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:14:10.488 -08 000000062 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:10.488 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:10.489 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:10.490 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.490 -08 000000018 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:14:10.490 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.491 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.491 -08 000000010 INF: ===================Move Tilt Motor 1===================
17-02-28 20:14:10.492 -08 000000047 INF: ===================Move Tilt Motor 3===================
17-02-28 20:14:10.492 -08 000000086 INF: ===================Move Tilt Motor 2===================
17-02-28 20:14:10.492 -08 000000010 INF: ======================================
17-02-28 20:14:10.492 -08 000000086 INF: ======================================
17-02-28 20:14:10.492 -08 000000047 INF: ======================================
17-02-28 20:14:10.493 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.494 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.494 -08 000000018 INF: ETF Best Z: -0.1029192 mm (26979 DAC)
17-02-28 20:14:10.494 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.495 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.495 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:14:10.495 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:14:10.939 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:10.939 -08 000000053 INF: FPGA: Recv MIOCOMPF
17-02-28 20:14:10.939 -08 000000018 INF: Compensator: Moved IntoPath in 444 ms
17-02-28 20:14:10.940 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.941 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.947 -08 000000018 INF: Swath 1 position calculated to be: {X=13.87993, Y=39.70011} from estimated center X= 14.357, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:14:10.947 -08 000000018 INF: Swath 2 position calculated to be: {X=14.98793, Y=39.70011} from estimated center X= 14.357, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:14:10.953 -08 000000018 INF: Swath 0: Converted transform from (62.4199, -34.96278) pixels to (0.02139, -0.012075) mm.
17-02-28 20:14:10.959 -08 000000018 INF: Swath 1: Converted transform from (38.86206, -32.46041) pixels to (0.013455, -0.01104) mm.
17-02-28 20:14:10.959 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011===================
17-02-28 20:14:10.959 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011===================
17-02-28 20:14:10.960 -08 000000018 INF: Transformed XStagePosition from 13.87993 mm to 13.901320496574 mm.
17-02-28 20:14:10.971 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4780413325653 mm.
17-02-28 20:14:10.971 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2780413325653 mm.
17-02-28 20:14:10.971 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3687913325652 mm.
17-02-28 20:14:10.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:10.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:14:10.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:10.974 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = D_1
17-02-28 20:14:10.979 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:10.980 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:10.980 -08 000000051 INF: ===================MoveEmissionFilters===================
17-02-28 20:14:10.981 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:10.981 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:14:10.981 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:10.981 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:14:10.981 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:10.981 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:10.981 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:10.982 -08 000000030 INF: ===================Move X,Y, Parallel===================
17-02-28 20:14:10.982 -08 000000032 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:14:10.982 -08 000000032 INF: Z Motor: Moving to -0.1229 mm, started at -0.0100 mm
17-02-28 20:14:10.982 -08 000000032 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:14:10.982 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:10.982 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:10.982 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:10.982 -08 000000062 INF: ===================Move X Motor without settling===================
17-02-28 20:14:10.983 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:10.983 -08 000000062 INF: X Motor: Xmit PR VM\n
17-02-28 20:14:10.983 -08 000000089 INF: Y Motor: Moving to 64.4780 mm @25.000 mm/sec, started at 62.9075 mm
17-02-28 20:14:10.983 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:10.983 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:10.983 -08 000000037 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:14:10.983 -08 000000098 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:14:10.983 -08 000000101 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:14:10.983 -08 000000038 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:14:10.983 -08 000000057 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:14:10.983 -08 000000064 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:14:10.984 -08 000000057 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:14:10.984 -08 000000101 INF: ======================================
17-02-28 20:14:10.984 -08 000000037 INF: ======================================
17-02-28 20:14:10.984 -08 000000057 INF: ======================================
17-02-28 20:14:10.984 -08 000000064 INF: ======================================
17-02-28 20:14:10.985 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:10.986 -08 000000057 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:14:10.986 -08 000000052 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:14:10.986 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:10.986 -08 000000057 INF: ======================================
17-02-28 20:14:10.986 -08 000000038 INF: ======================================
17-02-28 20:14:10.987 -08 000000052 INF: ======================================
17-02-28 20:14:10.987 -08 000000086 INF: ======================================
17-02-28 20:14:10.987 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:10.988 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:10.989 -08 000000047 INF: ======================================
17-02-28 20:14:10.989 -08 000000066 INF: ======================================
17-02-28 20:14:10.989 -08 000000098 INF: ======================================
17-02-28 20:14:10.990 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:10.991 -08 000000095 INF: ======================================
17-02-28 20:14:10.992 -08 000000051 INF: ======================================
17-02-28 20:14:11.003 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:11.003 -08 000000087 INF: FPGA: Recv ZTRG 
17-02-28 20:14:11.003 -08 000000032 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:14:11.003 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:11.003 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:11.003 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:14:11.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 5 of 5 seconds left===================
17-02-28 20:14:11.063 -08 000000066 INF: FPGA: Recv ZYT 
17-02-28 20:14:11.063 -08 000000032 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:14:11.063 -08 000000032 INF: FPGA: Xmit ZMV 32222\n
17-02-28 20:14:11.065 -08 000000062 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:14:11.065 -08 000000062 INF: X Motor: Xmit PR VI\n
17-02-28 20:14:11.065 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:14:11.065 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:11.065 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:11.130 -08 000000062 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:14:11.130 -08 000000062 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:14:11.130 -08 000000062 INF: X Motor: Moving to 13.9013 mm @15.000 mm/sec, started at 14.4346 mm
17-02-28 20:14:11.130 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:14:11.130 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:11.130 -08 000000062 INF: X Motor: Xmit MA -18472\n
17-02-28 20:14:11.130 -08 000000087 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:14:11.130 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:14:11.192 -08 000000062 INF: X Motor: Recv MA -18472\r\n>
17-02-28 20:14:11.192 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:14:11.192 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:11.192 -08 000000062 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:14:11.192 -08 000000089 INF: Y Motor: Set target position to 5947804 encoder counts
17-02-28 20:14:11.192 -08 000000089 INF: Y Motor: Xmit s r0xca 5947804\r
17-02-28 20:14:11.252 -08 000000037 INF: FPGA: Recv ZMV 
17-02-28 20:14:11.252 -08 000000032 INF: Z Motor: MoveAndTrigger 'ZMV' command took 188.9494 ms
17-02-28 20:14:11.252 -08 000000032 INF: FPGA: Xmit ZDACR\n
17-02-28 20:14:11.254 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:14:11.254 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:14:11.254 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:11.314 -08 000000058 INF: FPGA: Recv ZDACR 32222
17-02-28 20:14:11.314 -08 000000032 INF: Z Motor: MoveAndTrigger took 332.1481 ms w/comms
17-02-28 20:14:11.314 -08 000000032 INF: Z Motor: After move to -0.1229, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:14:11.314 -08 000000032 INF: Z Motor: MoveAbsStepped took 332.315 ms
17-02-28 20:14:11.315 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:11.316 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:14:11.316 -08 000000089 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:14:11.316 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:11.316 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:14:11.317 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:14:11.317 -08 000000057 INF: ===================Camera Arm TDI===================
17-02-28 20:14:11.317 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:11.318 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:11.318 -08 000000038 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:11.319 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:11.319 -08 000000057 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:11.319 -08 000000038 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:14:11.376 -08 000000085 INF: FPGA: Recv ZSEL 
17-02-28 20:14:11.377 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:11.377 -08 000000038 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:14:11.438 -08 000000044 INF: FPGA: Recv TDIBB
17-02-28 20:14:11.438 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:11.439 -08 000000038 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:11.440 -08 000000089 INF: Y Motor: Unshifted Position: 5872629
17-02-28 20:14:11.440 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:11.441 -08 000000038 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:14:11.442 -08 000000038 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:14:11.442 -08 000000038 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:14:11.490 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:11.500 -08 000000064 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:11.500 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:11.502 -08 000000038 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:14:11.502 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:11.504 -08 000000038 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:14:11.504 -08 000000038 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:14:11.504 -08 000000038 INF: Z Motor: Arming to move to -0.0829 mm
17-02-28 20:14:11.504 -08 000000038 INF: FPGA: Xmit ZYT 6427804 4\n
17-02-28 20:14:11.565 -08 000000069 INF: FPGA: Recv ZYT 
17-02-28 20:14:11.565 -08 000000038 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6372629 enc / 63.726 mm / ) = 6427804 enc / 64.278 mm
17-02-28 20:14:11.565 -08 000000038 INF: FPGA: Xmit ZARM 21736\n
17-02-28 20:14:11.617 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:11.627 -08 000000085 INF: FPGA: Recv ZARM
17-02-28 20:14:11.627 -08 000000038 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.6017 ms
17-02-28 20:14:11.627 -08 000000038 INF: Z Motor: ArmAbsStepped took 122.6895 ms
17-02-28 20:14:11.627 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:11.628 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:14:11.629 -08 000000062 INF: X Motor: Xmit PR ER\n
17-02-28 20:14:11.630 -08 000000038 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:14:11.631 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:14:11.632 -08 000000038 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:14:11.633 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:14:11.634 -08 000000038 INF: ======================================
17-02-28 20:14:11.691 -08 000000062 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:14:11.691 -08 000000062 INF: X Motor: Moved to 13.9023 after 498 ms
17-02-28 20:14:11.691 -08 000000062 INF: ======================================
17-02-28 20:14:11.753 -08 000000089 INF: Y Motor: Unshifted Position: 5947805
17-02-28 20:14:11.753 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:11.753 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:11.815 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:14:11.815 -08 000000089 INF: Y Motor: Moved to 64.4781 after 498 ms
17-02-28 20:14:11.815 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:11.877 -08 000000089 INF: Y Motor: Recv v 4096\r
17-02-28 20:14:11.877 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:11.877 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:11.939 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:14:11.939 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:11.939 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:12.001 -08 000000089 INF: Y Motor: Recv v 402653184\r
17-02-28 20:14:12.001 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:14:12.001 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:12.001 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:12.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:12.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 4 of 5 seconds left===================
17-02-28 20:14:12.066 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:14:12.066 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:12.066 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:12.066 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:12.128 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:14:12.128 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:12.128 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:12.190 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:14:12.190 -08 000000089 INF: ======================================
17-02-28 20:14:12.191 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:14:12.192 -08 000000030 INF: ======================================
17-02-28 20:14:12.237 -08 000000057 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:12.237 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:12.237 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:12.252 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:12.254 -08 000000057 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:13.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:13.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 3 of 5 seconds left===================
17-02-28 20:14:13.277 -08 000000057 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:13.277 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:13.277 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:13.292 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:13.294 -08 000000057 INF: ===================Camera Arm TDI===================
17-02-28 20:14:13.295 -08 000000057 INF: ======================================
17-02-28 20:14:13.296 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:13.297 -08 000000032 INF: ======================================
17-02-28 20:14:13.298 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:13.299 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:13.299 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:14:13.299 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:14:13.377 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:13.377 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:14:13.435 -08 000000047 INF: FPGA: Recv ZFREQCL
17-02-28 20:14:13.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:14:13.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:13.435 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:13.499 -08 000000045 INF: FPGA: Recv TDIYERD 6447805
17-02-28 20:14:13.499 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447805 counts (64.478 mm)
17-02-28 20:14:13.500 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:13.500 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:13.501 -08 000000051 INF: ===================TDI FPGA Arm===================
17-02-28 20:14:13.501 -08 000000098 INF: ===================Set YMotor gains for scans===================
17-02-28 20:14:13.501 -08 000000098 INF: ======================================
17-02-28 20:14:13.502 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:13.502 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:14:13.502 -08 000000051 INF: FPGA: Xmit TDIYPOS 6336879\n
17-02-28 20:14:13.559 -08 000000104 INF: FPGA: Recv TDIYPOS
17-02-28 20:14:13.559 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:13.560 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:14:13.561 -08 000000051 INF: FPGA: Xmit TDIYARM3 139264 6427804 1 1\n
17-02-28 20:14:13.624 -08 000000055 INF: FPGA: Recv TDIYARM3
17-02-28 20:14:13.624 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:13.625 -08 000000051 INF: ===================TDI FPGA Arm===================
17-02-28 20:14:13.626 -08 000000051 INF: ======================================
17-02-28 20:14:13.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:13.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:13.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:13.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:13.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:13.630 -08 000000034 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:14:13.630 -08 000000030 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:14:13.630 -08 000000034 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:14:13.630 -08 000000034 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:14:13.630 -08 000000034 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:14:13.630 -08 000000030 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:14:13.630 -08 000000034 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:14:13.630 -08 000000030 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:14:13.630 -08 000000030 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:14:13.631 -08 000000030 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:14:13.996 -08 000000045 INF: FPGA: Recv EX2MV
17-02-28 20:14:13.996 -08 000000045 INF: FPGA: Recv EX1MV
17-02-28 20:14:13.996 -08 000000030 INF: Excitation Filter 1: Moved -107 steps in 365.6134 ms
17-02-28 20:14:13.996 -08 000000030 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.7722 ms
17-02-28 20:14:13.996 -08 000000030 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.8445 ms
17-02-28 20:14:13.996 -08 000000034 INF: Excitation Filter 2: Moved -107 steps in 365.8316 ms
17-02-28 20:14:13.996 -08 000000034 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.0216 ms
17-02-28 20:14:13.996 -08 000000034 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.0924 ms
17-02-28 20:14:13.996 -08 000000030 INF: ======================================
17-02-28 20:14:13.996 -08 000000034 INF: ======================================
17-02-28 20:14:13.997 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:13.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:13.999 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:14:13.999 -08 000000069 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:13.999 -08 000000029 INF: ===================FPGA Z Wait===================
17-02-28 20:14:13.999 -08 000000044 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:14.000 -08 000000044 INF: Y Motor: Moving to 14.8297 mm @6.500 mm/sec, started at 64.4781 mm
17-02-28 20:14:14.000 -08 000000044 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:14.000 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:14.000 -08 000000086 INF: ===================Camera TDI, Parallel===================
17-02-28 20:14:14.000 -08 000000069 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:14:14.000 -08 000000069 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:14:14.001 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:14:14.001 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:14.002 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:14.002 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:14.003 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:14.003 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:14.003 -08 000000029 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:14:14.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:14.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 2 of 5 seconds left===================
17-02-28 20:14:14.060 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:14.060 -08 000000044 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:14.060 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:14.125 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:14.125 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:14.152 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:14.152 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:14.153 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:14.153 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:14.187 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:14.187 -08 000000044 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:14.187 -08 000000044 INF: Y Motor: Set target position to 982970 encoder counts
17-02-28 20:14:14.187 -08 000000044 INF: Y Motor: Xmit s r0xca 982970\r
17-02-28 20:14:14.249 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:14.249 -08 000000044 INF: Y Motor: Start the move command
17-02-28 20:14:14.249 -08 000000044 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:14.302 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:14.302 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:14.303 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:14.303 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:14.312 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:14.312 -08 000000044 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:14:14.312 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:14.371 -08 000000052 INF: FPGA: Recv ZWAIT 
17-02-28 20:14:14.371 -08 000000029 INF: ======================================
17-02-28 20:14:14.435 -08 000000044 INF: Y Motor: Unshifted Position: 5885946
17-02-28 20:14:14.452 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:14.452 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:14:14.452 -08 000000058 INF: ===================Camera #0 Frame #4===================
17-02-28 20:14:14.453 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:14.453 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:14.453 -08 000000081 INF: ===================Camera #2 Frame #5===================
17-02-28 20:14:14.485 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:14.613 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:14.615 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:14:14.615 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:14:14.615 -08 000000058 INF: ===================Camera #0 Frame #10===================
17-02-28 20:14:14.620 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:14:14.620 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:14:14.620 -08 000000081 INF: ===================Camera #2 Frame #11===================
17-02-28 20:14:14.750 -08 000000044 INF: Y Motor: Unshifted Position: 5682284
17-02-28 20:14:14.785 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:14:14.785 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:14:14.785 -08 000000058 INF: ===================Camera #0 Frame #17===================
17-02-28 20:14:14.790 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:14:14.790 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:14:14.790 -08 000000081 INF: ===================Camera #2 Frame #17===================
17-02-28 20:14:14.800 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:14.923 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:14.958 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:14:14.958 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:14:14.958 -08 000000058 INF: ===================Camera #0 Frame #23===================
17-02-28 20:14:14.960 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:14:14.960 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:14:14.960 -08 000000081 INF: ===================Camera #2 Frame #23===================
17-02-28 20:14:15.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:15.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 1 of 5 seconds left===================
17-02-28 20:14:15.059 -08 000000044 INF: Y Motor: Unshifted Position: 5480789
17-02-28 20:14:15.109 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:15.128 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:14:15.128 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:14:15.128 -08 000000058 INF: ===================Camera #0 Frame #29===================
17-02-28 20:14:15.131 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:14:15.131 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:14:15.131 -08 000000081 INF: ===================Camera #2 Frame #29===================
17-02-28 20:14:15.236 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:15.298 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:14:15.298 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:14:15.298 -08 000000058 INF: ===================Camera #0 Frame #36===================
17-02-28 20:14:15.302 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:14:15.302 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:14:15.302 -08 000000081 INF: ===================Camera #2 Frame #36===================
17-02-28 20:14:15.372 -08 000000044 INF: Y Motor: Unshifted Position: 5276467
17-02-28 20:14:15.422 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:15.471 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:14:15.471 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:14:15.471 -08 000000058 INF: ===================Camera #0 Frame #42===================
17-02-28 20:14:15.476 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:14:15.476 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:14:15.476 -08 000000081 INF: ===================Camera #2 Frame #42===================
17-02-28 20:14:15.546 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:15.641 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:14:15.641 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:14:15.641 -08 000000058 INF: ===================Camera #0 Frame #48===================
17-02-28 20:14:15.646 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:14:15.646 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:14:15.646 -08 000000081 INF: ===================Camera #2 Frame #48===================
17-02-28 20:14:15.685 -08 000000044 INF: Y Motor: Unshifted Position: 5074748
17-02-28 20:14:15.735 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:15.811 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:14:15.811 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:14:15.811 -08 000000058 INF: ===================Camera #0 Frame #54===================
17-02-28 20:14:15.817 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:14:15.817 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:14:15.817 -08 000000081 INF: ===================Camera #2 Frame #55===================
17-02-28 20:14:15.859 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:15.981 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:14:15.981 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:14:15.981 -08 000000058 INF: ===================Camera #0 Frame #61===================
17-02-28 20:14:15.991 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:14:15.991 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:14:15.991 -08 000000081 INF: ===================Camera #2 Frame #61===================
17-02-28 20:14:15.995 -08 000000044 INF: Y Motor: Unshifted Position: 4871307
17-02-28 20:14:16.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:16.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:16.004 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:14:16.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:16.045 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.103 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:14:16.152 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:14:16.152 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:14:16.152 -08 000000058 INF: ===================Camera #0 Frame #67===================
17-02-28 20:14:16.160 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:14:16.160 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:14:16.160 -08 000000081 INF: ===================Camera #2 Frame #67===================
17-02-28 20:14:16.172 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.183 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`15360 (0x03)\r\n(0xFF)
17-02-28 20:14:16.183 -08 000000042 INF: Current Position of Pump is: 15360
17-02-28 20:14:16.284 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:14:16.309 -08 000000044 INF: Y Motor: Unshifted Position: 4667853
17-02-28 20:14:16.321 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:14:16.321 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:14:16.321 -08 000000058 INF: ===================Camera #0 Frame #73===================
17-02-28 20:14:16.330 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:14:16.330 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:14:16.330 -08 000000081 INF: ===================Camera #2 Frame #74===================
17-02-28 20:14:16.359 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.371 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`15360 (0x03)\r\n(0xFF)
17-02-28 20:14:16.371 -08 000000042 INF: Current Position of Pump is: 15360
17-02-28 20:14:16.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Dispensing port PortC===================
17-02-28 20:14:16.471 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD15360R\r
17-02-28 20:14:16.483 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.491 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:14:16.491 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:14:16.491 -08 000000058 INF: ===================Camera #0 Frame #79===================
17-02-28 20:14:16.504 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:14:16.504 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:14:16.504 -08 000000081 INF: ===================Camera #2 Frame #80===================
17-02-28 20:14:16.556 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:16.622 -08 000000044 INF: Y Motor: Unshifted Position: 4465906
17-02-28 20:14:16.656 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:16.661 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:14:16.661 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:14:16.661 -08 000000058 INF: ===================Camera #0 Frame #86===================
17-02-28 20:14:16.672 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.675 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:14:16.675 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:14:16.675 -08 000000081 INF: ===================Camera #2 Frame #86===================
17-02-28 20:14:16.683 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:16.796 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.834 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:14:16.834 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:14:16.834 -08 000000058 INF: ===================Camera #0 Frame #92===================
17-02-28 20:14:16.846 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:14:16.846 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:14:16.846 -08 000000081 INF: ===================Camera #2 Frame #93===================
17-02-28 20:14:16.932 -08 000000044 INF: Y Motor: Unshifted Position: 4262461
17-02-28 20:14:16.933 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:16.982 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.993 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:17.004 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:14:17.004 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:14:17.004 -08 000000058 INF: ===================Camera #0 Frame #98===================
17-02-28 20:14:17.020 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:14:17.020 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:14:17.020 -08 000000081 INF: ===================Camera #2 Frame #99===================
17-02-28 20:14:17.109 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:17.174 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:14:17.174 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:14:17.174 -08 000000058 INF: ===================Camera #0 Frame #105===================
17-02-28 20:14:17.191 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:14:17.191 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:14:17.191 -08 000000081 INF: ===================Camera #2 Frame #105===================
17-02-28 20:14:17.243 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:17.246 -08 000000044 INF: Y Motor: Unshifted Position: 4060305
17-02-28 20:14:17.296 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:17.307 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:17.347 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:14:17.347 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:14:17.347 -08 000000058 INF: ===================Camera #0 Frame #111===================
17-02-28 20:14:17.362 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:14:17.362 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:14:17.362 -08 000000081 INF: ===================Camera #2 Frame #112===================
17-02-28 20:14:17.420 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:17.517 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:14:17.517 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:14:17.517 -08 000000058 INF: ===================Camera #0 Frame #117===================
17-02-28 20:14:17.536 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:14:17.536 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:14:17.536 -08 000000081 INF: ===================Camera #2 Frame #118===================
17-02-28 20:14:17.556 -08 000000044 INF: Y Motor: Unshifted Position: 3856640
17-02-28 20:14:17.557 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:17.606 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:17.617 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:17.687 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:14:17.687 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:14:17.687 -08 000000058 INF: ===================Camera #0 Frame #124===================
17-02-28 20:14:17.707 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:14:17.707 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:14:17.707 -08 000000081 INF: ===================Camera #2 Frame #124===================
17-02-28 20:14:17.730 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:17.860 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:14:17.860 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:14:17.860 -08 000000058 INF: ===================Camera #0 Frame #130===================
17-02-28 20:14:17.867 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:17.871 -08 000000044 INF: Y Motor: Unshifted Position: 3654489
17-02-28 20:14:17.878 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:14:17.878 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:14:17.878 -08 000000081 INF: ===================Camera #2 Frame #131===================
17-02-28 20:14:17.921 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:17.931 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:18.029 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:14:18.029 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:14:18.029 -08 000000058 INF: ===================Camera #0 Frame #136===================
17-02-28 20:14:18.046 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:18.052 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:14:18.052 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:14:18.052 -08 000000081 INF: ===================Camera #2 Frame #137===================
17-02-28 20:14:18.180 -08 000000044 INF: Y Motor: Unshifted Position: 3450167
17-02-28 20:14:18.181 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:18.199 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:14:18.199 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:14:18.199 -08 000000058 INF: ===================Camera #0 Frame #142===================
17-02-28 20:14:18.223 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:14:18.223 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:14:18.223 -08 000000081 INF: ===================Camera #2 Frame #143===================
17-02-28 20:14:18.230 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:18.241 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:18.354 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:18.369 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:14:18.369 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:14:18.369 -08 000000058 INF: ===================Camera #0 Frame #149===================
17-02-28 20:14:18.394 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:14:18.394 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:14:18.394 -08 000000081 INF: ===================Camera #2 Frame #150===================
17-02-28 20:14:18.491 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:18.494 -08 000000044 INF: Y Motor: Unshifted Position: 3248669
17-02-28 20:14:18.542 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:14:18.542 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:14:18.542 -08 000000058 INF: ===================Camera #0 Frame #155===================
17-02-28 20:14:18.544 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:18.555 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:18.568 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:14:18.568 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:14:18.568 -08 000000081 INF: ===================Camera #2 Frame #156===================
17-02-28 20:14:18.668 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:18.712 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:14:18.712 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:14:18.712 -08 000000058 INF: ===================Camera #0 Frame #161===================
17-02-28 20:14:18.738 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:14:18.738 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:14:18.738 -08 000000081 INF: ===================Camera #2 Frame #162===================
17-02-28 20:14:18.804 -08 000000044 INF: Y Motor: Unshifted Position: 3045010
17-02-28 20:14:18.805 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:18.854 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:18.865 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:18.865 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:18.865 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:14:18.882 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:14:18.882 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:14:18.882 -08 000000058 INF: ===================Camera #0 Frame #168===================
17-02-28 20:14:18.909 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:14:18.909 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:14:18.909 -08 000000081 INF: ===================Camera #2 Frame #169===================
17-02-28 20:14:18.978 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.055 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:14:19.055 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:14:19.055 -08 000000058 INF: ===================Camera #0 Frame #174===================
17-02-28 20:14:19.083 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:14:19.083 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:14:19.083 -08 000000081 INF: ===================Camera #2 Frame #175===================
17-02-28 20:14:19.116 -08 000000044 INF: Y Motor: Unshifted Position: 2842867
17-02-28 20:14:19.166 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.225 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:14:19.225 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:14:19.225 -08 000000058 INF: ===================Camera #0 Frame #180===================
17-02-28 20:14:19.254 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:14:19.254 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:14:19.254 -08 000000081 INF: ===================Camera #2 Frame #181===================
17-02-28 20:14:19.290 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.395 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:14:19.395 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:14:19.395 -08 000000058 INF: ===================Camera #0 Frame #186===================
17-02-28 20:14:19.425 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:14:19.425 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:14:19.425 -08 000000081 INF: ===================Camera #2 Frame #188===================
17-02-28 20:14:19.430 -08 000000044 INF: Y Motor: Unshifted Position: 2639844
17-02-28 20:14:19.480 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.565 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:14:19.565 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:14:19.565 -08 000000058 INF: ===================Camera #0 Frame #193===================
17-02-28 20:14:19.597 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:14:19.597 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:14:19.597 -08 000000081 INF: ===================Camera #2 Frame #194===================
17-02-28 20:14:19.604 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.738 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:14:19.738 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:14:19.738 -08 000000058 INF: ===================Camera #0 Frame #199===================
17-02-28 20:14:19.740 -08 000000044 INF: Y Motor: Unshifted Position: 2436410
17-02-28 20:14:19.768 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:14:19.768 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:14:19.768 -08 000000081 INF: ===================Camera #2 Frame #200===================
17-02-28 20:14:19.790 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.906 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:14:19.906 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:14:19.906 -08 000000058 INF: ===================Camera #0 Frame #205===================
17-02-28 20:14:19.914 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.938 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:14:19.938 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:14:19.938 -08 000000081 INF: ===================Camera #2 Frame #206===================
17-02-28 20:14:19.965 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:14:20.053 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:20.054 -08 000000044 INF: Y Motor: Unshifted Position: 2232737
17-02-28 20:14:20.076 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:14:20.076 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:14:20.076 -08 000000058 INF: ===================Camera #0 Frame #211===================
17-02-28 20:14:20.104 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:20.109 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:14:20.109 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:14:20.109 -08 000000081 INF: ===================Camera #2 Frame #213===================
17-02-28 20:14:20.153 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:20.226 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:20.241 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:20.245 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:14:20.245 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:14:20.245 -08 000000058 INF: ===================Camera #0 Frame #218===================
17-02-28 20:14:20.283 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:14:20.283 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:14:20.283 -08 000000081 INF: ===================Camera #2 Frame #219===================
17-02-28 20:14:20.366 -08 000000044 INF: Y Motor: Unshifted Position: 2031239
17-02-28 20:14:20.416 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:20.418 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:14:20.418 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:14:20.418 -08 000000058 INF: ===================Camera #0 Frame #224===================
17-02-28 20:14:20.454 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:14:20.454 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:14:20.454 -08 000000081 INF: ===================Camera #2 Frame #225===================
17-02-28 20:14:20.491 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:20.540 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:20.551 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:20.551 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:20.551 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-02-28 20:14:20.588 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:14:20.588 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:14:20.588 -08 000000058 INF: ===================Camera #0 Frame #230===================
17-02-28 20:14:20.625 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:14:20.625 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:14:20.625 -08 000000081 INF: ===================Camera #2 Frame #232===================
17-02-28 20:14:20.676 -08 000000044 INF: Y Motor: Unshifted Position: 1827564
17-02-28 20:14:20.726 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:20.757 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:14:20.757 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:14:20.757 -08 000000058 INF: ===================Camera #0 Frame #237===================
17-02-28 20:14:20.799 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:14:20.799 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:14:20.799 -08 000000081 INF: ===================Camera #2 Frame #238===================
17-02-28 20:14:20.852 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:20.926 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:20.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:20.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:20.928 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:20.930 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:14:20.930 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:14:20.930 -08 000000058 INF: ===================Camera #0 Frame #243===================
17-02-28 20:14:20.969 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:14:20.969 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:14:20.969 -08 000000081 INF: ===================Camera #2 Frame #244===================
17-02-28 20:14:20.989 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:20.989 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB2 (8)===================
17-02-28 20:14:20.989 -08 000000042 INF: Valve B1: Go to position 8
17-02-28 20:14:20.989 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:14:20.990 -08 000000044 INF: Y Motor: Unshifted Position: 1623684
17-02-28 20:14:21.040 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.051 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 4\r
17-02-28 20:14:21.051 -08 000000042 INF: Valve B1: 22.964 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:14:21.051 -08 000000042 INF: Valve B1: Taking longest path 'CC' from 4 to 8 to avoid 7
17-02-28 20:14:21.051 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CC8\r
17-02-28 20:14:21.051 -08 000000042 INF: SerialPort B1 (VICIB1): Recv  (discarded)
17-02-28 20:14:21.051 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:14:21.100 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:14:21.100 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:14:21.100 -08 000000058 INF: ===================Camera #0 Frame #249===================
17-02-28 20:14:21.139 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:14:21.139 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:14:21.139 -08 000000081 INF: ===================Camera #2 Frame #251===================
17-02-28 20:14:21.164 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.270 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:14:21.270 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:14:21.270 -08 000000058 INF: ===================Camera #0 Frame #255===================
17-02-28 20:14:21.300 -08 000000044 INF: Y Motor: Unshifted Position: 1421742
17-02-28 20:14:21.313 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:14:21.313 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:14:21.313 -08 000000081 INF: ===================Camera #2 Frame #257===================
17-02-28 20:14:21.350 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.438 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:14:21.438 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:14:21.438 -08 000000058 INF: ===================Camera #0 Frame #262===================
17-02-28 20:14:21.474 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.482 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:14:21.482 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:14:21.482 -08 000000081 INF: ===================Camera #2 Frame #263===================
17-02-28 20:14:21.609 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:14:21.609 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:14:21.609 -08 000000058 INF: ===================Camera #0 Frame #268===================
17-02-28 20:14:21.611 -08 000000044 INF: Y Motor: Unshifted Position: 1219589
17-02-28 20:14:21.651 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:14:21.651 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:14:21.651 -08 000000081 INF: ===================Camera #2 Frame #269===================
17-02-28 20:14:21.661 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.736 -08 000000038 INF: FPGA: Recv TDIYWAIT
17-02-28 20:14:21.736 -08 000000069 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:21.738 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 8\r
17-02-28 20:14:21.738 -08 000000069 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:14:21.738 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:21.738 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-02-28 20:14:21.739 -08 000000029 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:14:21.739 -08 000000030 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:14:21.739 -08 000000029 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:14:21.739 -08 000000029 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:14:21.739 -08 000000029 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:14:21.739 -08 000000029 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:14:21.739 -08 000000030 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:14:21.739 -08 000000030 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:14:21.739 -08 000000030 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:14:21.740 -08 000000030 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:14:21.778 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:21.778 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:21.778 -08 000000058 INF: ===================Camera #0 Frame #272===================
17-02-28 20:14:21.788 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.791 -08 000000058 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:21.792 -08 000000058 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:21.924 -08 000000044 INF: Y Motor: Unshifted Position: 1015925
17-02-28 20:14:21.957 -08 000000058 INF: Camera #0 ReleaseBuffer
17-02-28 20:14:21.957 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:21.957 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:21.957 -08 000000081 INF: ===================Camera #2 Frame #272===================
17-02-28 20:14:21.957 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:14:21.967 -08 000000081 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:21.968 -08 000000081 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:21.974 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.991 -08 000000058 INF: ======================================
17-02-28 20:14:22.112 -08 000000066 INF: FPGA: Recv EX2MV
17-02-28 20:14:22.112 -08 000000066 INF: FPGA: Recv EX1MV
17-02-28 20:14:22.112 -08 000000029 INF: Excitation Filter 2: Moved 107 steps in 372.9616 ms
17-02-28 20:14:22.112 -08 000000029 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.0605 ms
17-02-28 20:14:22.112 -08 000000029 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.1319 ms
17-02-28 20:14:22.112 -08 000000030 INF: Excitation Filter 1: Moved 107 steps in 372.8232 ms
17-02-28 20:14:22.112 -08 000000030 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.0643 ms
17-02-28 20:14:22.112 -08 000000030 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.203 ms
17-02-28 20:14:22.112 -08 000000029 INF: ======================================
17-02-28 20:14:22.112 -08 000000030 INF: ======================================
17-02-28 20:14:22.114 -08 000000044 INF: Y Motor: Unshifted Position: 982969
17-02-28 20:14:22.114 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:22.114 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:22.114 -08 000000069 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:22.115 -08 000000069 INF: ======================================
17-02-28 20:14:22.167 -08 000000081 INF: Camera #2 ReleaseBuffer
17-02-28 20:14:22.167 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:22.175 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:22.175 -08 000000044 INF: Y Motor: Moved to 14.8297 after 7862 ms
17-02-28 20:14:22.175 -08 000000044 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:22.202 -08 000000081 INF: ======================================
17-02-28 20:14:22.203 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:14:22.204 -08 000000086 INF: ======================================
17-02-28 20:14:22.234 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:22.234 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:22.234 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:22.238 -08 000000044 INF: Y Motor: Recv v 4097\r
17-02-28 20:14:22.238 -08 000000044 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:22.238 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:22.298 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:22.299 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:22.299 -08 000000044 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:22.299 -08 000000044 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:22.306 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:14:22.361 -08 000000044 INF: Y Motor: Recv v 134217728\r
17-02-28 20:14:22.361 -08 000000044 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:14:22.361 -08 000000044 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:22.361 -08 000000044 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:22.398 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:14:22.423 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:22.423 -08 000000044 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:22.423 -08 000000044 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:22.423 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:22.484 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:14:22.484 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:14:22.485 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:22.485 -08 000000044 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:22.485 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:22.547 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:22.547 -08 000000044 INF: ======================================
17-02-28 20:14:22.548 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:22.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:22.550 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:22.550 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:14:22.584 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:14:22.610 -08 000000053 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:14:22.610 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:22.672 -08 000000108 INF: FPGA: Recv TDIYERD 1482971
17-02-28 20:14:22.672 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:14:22.673 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:22.734 -08 000000052 INF: FPGA: Recv ZADCR 31548
17-02-28 20:14:22.734 -08 000000018 INF: At scan end Y pos = 14.830 and Z pos = -0.121. Y moved -48.539 mm
17-02-28 20:14:22.734 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:14:22.773 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:22.796 -08 000000034 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:14:22.796 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:14:22.796 -08 000000018 INF: TDIScan finished after 11835.9549 ms
17-02-28 20:14:22.796 -08 000000018 INF: Image[0]: Y should trigger at 63.369 mm, 2nd row was at 64.278 mm (error = 0.909 mm)
17-02-28 20:14:22.796 -08 000000018 INF: Image[2]: Y should trigger at 63.369 mm, 2nd row was at 64.278 mm (error = 0.909 mm)
17-02-28 20:14:22.798 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:22.830 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.897 um
17-02-28 20:14:22.831 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:22.831 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:14:22.858 -08 000000109 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:14:22.859 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:22.859 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:22.859 -08 000000047 INF: ===================Dither Clean Up Command===================
17-02-28 20:14:22.859 -08 000000089 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:14:22.860 -08 000000087 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:14:22.860 -08 000000102 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:14:22.860 -08 000000087 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:22.860 -08 000000087 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:22.860 -08 000000089 INF: ======================================
17-02-28 20:14:22.860 -08 000000102 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:14:22.860 -08 000000102 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:14:22.860 -08 000000045 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:22.860 -08 000000055 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:22.861 -08 000000045 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:14:22.864 -08 000000055 INF: ===================LFT:Extracting coords===================
17-02-28 20:14:22.889 -08 000000055 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:22.890 -08 000000055 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:14:22.891 -08 000000062 INF: ===================LookupFocusTracking===================
17-02-28 20:14:22.891 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:14:22.891 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:14:22.891 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:14:22.891 -08 000000062 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:22.891 -08 000000085 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:22.891 -08 000000066 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:22.891 -08 000000034 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:22.922 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:14:22.922 -08 000000087 INF: ======================================
17-02-28 20:14:22.922 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:22.922 -08 000000051 INF: FPGA: Recv ZSEL 
17-02-28 20:14:22.923 -08 000000045 INF: FPGA: Xmit ZDACW 32222\n
17-02-28 20:14:22.923 -08 000000102 INF: ======================================
17-02-28 20:14:22.965 -08 000000062 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:22.965 -08 000000085 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:22.965 -08 000000066 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:22.965 -08 000000034 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:22.982 -08 000000069 INF: FPGA: Recv ZDACW 
17-02-28 20:14:22.982 -08 000000045 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:14:22.983 -08 000000045 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:14:23.048 -08 000000108 INF: FPGA: Recv TDIBB
17-02-28 20:14:23.048 -08 000000045 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:23.049 -08 000000045 INF: ======================================
17-02-28 20:14:23.109 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:23.116 -08 000000066 INF: LFT found best fwhm score 2.184365 in 151 ms
17-02-28 20:14:23.117 -08 000000066 INF: LFT found good score at index 4709 with fwhm value 2.184365. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:23.117 -08 000000062 INF: LFT found best fwhm score 2.000736 in 152 ms
17-02-28 20:14:23.117 -08 000000085 INF: LFT found best fwhm score 2.000124 in 152 ms
17-02-28 20:14:23.117 -08 000000085 INF: LFT found good score at index 4209 with fwhm value 2.000124. Next cycle, cycle 4 starting Z position for top surface is at -0.125 mm FC:A, C:3,L:4,T
17-02-28 20:14:23.117 -08 000000062 INF: LFT found good score at index 4901 with fwhm value 2.000736. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:23.117 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:14:23.117 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:14:23.117 -08 000000062 INF: ===================LookupFocusTracking===================
17-02-28 20:14:23.117 -08 000000034 INF: LFT found best fwhm score 2.00011 in 151 ms
17-02-28 20:14:23.117 -08 000000034 INF: LFT found good score at index 8517 with fwhm value 2.00011. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:23.117 -08 000000066 INF: ======================================
17-02-28 20:14:23.117 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:14:23.117 -08 000000062 INF: ======================================
17-02-28 20:14:23.118 -08 000000085 INF: ======================================
17-02-28 20:14:23.118 -08 000000034 INF: ======================================
17-02-28 20:14:23.119 -08 000000055 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:23.120 -08 000000055 INF: LFT weighted average best Z for top surface is at -0.125mm FC:A, C:3,L:4,T
17-02-28 20:14:23.120 -08 000000055 INF: ======================================
17-02-28 20:14:23.121 -08 000000047 INF: ======================================
17-02-28 20:14:23.122 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.123 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:14:23.123 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.123 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:14:23.123 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:14:23.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:14:23.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011===================
17-02-28 20:14:23.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011===================
17-02-28 20:14:23.125 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:14:23.125 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011===================
17-02-28 20:14:23.126 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Waiting for image analysis===================
17-02-28 20:14:23.126 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:23.148 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:14:23.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:23.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011===================
17-02-28 20:14:23.149 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011===================
17-02-28 20:14:23.149 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:14:23.150 -08 000000018 INF: Transformed XStagePosition from 14.98793 mm to 15.0013852976263 mm.
17-02-28 20:14:23.161 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4790763327628 mm.
17-02-28 20:14:23.161 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2790763327628 mm.
17-02-28 20:14:23.161 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3698263327628 mm.
17-02-28 20:14:23.164 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.164 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:14:23.164 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.164 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -122.9 um, section = D_1
17-02-28 20:14:23.189 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":4,"Tile":1101,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF280","HCSMMF241","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.191 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:23.191 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:23.194 -08 000000085 INF: ===================MoveEmissionFilters===================
17-02-28 20:14:23.194 -08 000000047 INF: ===================Move X,Y===================
17-02-28 20:14:23.194 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:23.194 -08 000000047 INF: ===================Move X,Y, Parallel===================
17-02-28 20:14:23.195 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:14:23.195 -08 000000104 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:14:23.195 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:23.196 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:14:23.198 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:23.198 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:14:23.198 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:23.199 -08 000000066 INF: ===================Move X Motor without settling===================
17-02-28 20:14:23.199 -08 000000066 INF: X Motor: Xmit PR VM\n
17-02-28 20:14:23.199 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:23.199 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:23.199 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:23.200 -08 000000050 INF: ===================Camera Arm TDI===================
17-02-28 20:14:23.200 -08 000000102 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:23.200 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:23.200 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:23.201 -08 000000102 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:14:23.201 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:23.201 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:23.201 -08 000000050 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:23.204 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:23.204 -08 000000044 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:23.204 -08 000000044 INF: Y Motor: Moving to 64.4791 mm @25.000 mm/sec, started at 14.8297 mm
17-02-28 20:14:23.205 -08 000000044 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:23.205 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:23.207 -08 000000106 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:14:23.207 -08 000000106 INF: ======================================
17-02-28 20:14:23.209 -08 000000106 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:14:23.210 -08 000000106 INF: ======================================
17-02-28 20:14:23.212 -08 000000106 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:23.213 -08 000000106 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:23.218 -08 000000055 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:14:23.218 -08 000000057 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:14:23.218 -08 000000055 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:14:23.218 -08 000000032 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:14:23.218 -08 000000057 INF: ======================================
17-02-28 20:14:23.219 -08 000000055 INF: ======================================
17-02-28 20:14:23.219 -08 000000032 INF: ======================================
17-02-28 20:14:23.221 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:23.223 -08 000000052 INF: ======================================
17-02-28 20:14:23.226 -08 000000034 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:14:23.227 -08 000000034 INF: ======================================
17-02-28 20:14:23.230 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:23.230 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":4,"Tile":1105,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF240","HCSMMF262","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.231 -08 000000089 INF: ======================================
17-02-28 20:14:23.232 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:23.233 -08 000000089 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:14:23.233 -08 000000089 INF: ======================================
17-02-28 20:14:23.233 -08 000000030 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:14:23.233 -08 000000058 INF: ======================================
17-02-28 20:14:23.234 -08 000000030 INF: ======================================
17-02-28 20:14:23.234 -08 000000089 INF: FPGA: Recv ZSEL 
17-02-28 20:14:23.236 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:23.237 -08 000000102 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:14:23.237 -08 000000066 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:14:23.237 -08 000000066 INF: X Motor: Xmit PR VI\n
17-02-28 20:14:23.245 -08 000000106 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:23.248 -08 000000106 INF: ======================================
17-02-28 20:14:23.250 -08 000000085 INF: ======================================
17-02-28 20:14:23.295 -08 000000089 INF: FPGA: Recv TDIBB
17-02-28 20:14:23.296 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:23.297 -08 000000066 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:14:23.297 -08 000000066 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:14:23.297 -08 000000066 INF: X Motor: Moving to 15.0014 mm @15.000 mm/sec, started at 13.9023 mm
17-02-28 20:14:23.297 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:23.297 -08 000000066 INF: X Motor: Xmit MA -18022\n
17-02-28 20:14:23.297 -08 000000044 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:23.297 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:23.297 -08 000000102 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:23.297 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:23.299 -08 000000102 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:14:23.299 -08 000000102 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:14:23.299 -08 000000102 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:14:23.304 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:14:23.350 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":4,"Tile":1102,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF200","HCSMMF252","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.352 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":4,"Tile":1106,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF239","HCSMMF231","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.353 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":4,"Tile":1108,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF178","HCSMMF251","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.354 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":4,"Tile":1103,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF222","HCSMMF220","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.355 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":4,"Tile":1107,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF265","HCSMMF273","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.356 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":4,"Tile":1110,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF281","HCSMMF180","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.357 -08 000000081 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:23.358 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:23.358 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:23.359 -08 000000066 INF: X Motor: Recv MA -18022\r\n>
17-02-28 20:14:23.359 -08 000000066 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:14:23.361 -08 000000102 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:14:23.361 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:23.362 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":4,"Tile":1109,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF270","HCSMMF225","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.363 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:23.363 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:23.364 -08 000000102 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:14:23.364 -08 000000102 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:14:23.364 -08 000000102 INF: Z Motor: Arming to move to -0.0829 mm
17-02-28 20:14:23.364 -08 000000102 INF: FPGA: Xmit ZYT 6427908 4\n
17-02-28 20:14:23.364 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":4,"Tile":1113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF266","HCSMMF237","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.365 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":4,"Tile":1114,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF199","HCSMMF254","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.366 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":4,"Tile":1104,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF212","HCSMMF195","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.367 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":4,"Tile":1111,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF193","HCSMMF235","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.367 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":4,"Tile":1115,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF253","HCSMMF214","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.368 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":4,"Tile":1112,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF245","HCSMMF283","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.369 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":4,"Tile":1118,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF279","HCSMMF221","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.370 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":4,"Tile":1116,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF185","HCSMMF217","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.371 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":4,"Tile":1117,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF182","HCSMMF219","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.371 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":4,"Tile":1119,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF204","HCSMMF191","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.372 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":4,"Tile":1120,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF272","HCSMMF196","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.373 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":4,"Tile":1121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF177","HCSMMF249","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.373 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":4,"Tile":1122,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF208","HCSMMF228","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.375 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":4,"Tile":1124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF230","HCSMMF216","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.376 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":4,"Tile":1123,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF194","HCSMMF229","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.377 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":4,"Tile":1126,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF190","HCSMMF207","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.378 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":4,"Tile":1127,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF176","HCSMMF285","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.379 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":4,"Tile":1125,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF246","HCSMMF243","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.380 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":4,"Tile":1128,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF287","HCSMMF267","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.382 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.388 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:14:23.420 -08 000000045 INF: FPGA: Recv ZYT 
17-02-28 20:14:23.420 -08 000000102 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1482969 enc / 14.830 mm / ) = 6427908 enc / 64.279 mm
17-02-28 20:14:23.420 -08 000000102 INF: FPGA: Xmit ZARM 21736\n
17-02-28 20:14:23.421 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:23.421 -08 000000044 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:23.421 -08 000000044 INF: Y Motor: Set target position to 5947908 encoder counts
17-02-28 20:14:23.421 -08 000000044 INF: Y Motor: Xmit s r0xca 5947908\r
17-02-28 20:14:23.458 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:23.481 -08 000000062 INF: FPGA: Recv ZARM
17-02-28 20:14:23.481 -08 000000102 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.1049 ms
17-02-28 20:14:23.481 -08 000000102 INF: Z Motor: ArmAbsStepped took 117.1224 ms
17-02-28 20:14:23.481 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:23.483 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:23.483 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:14:23.483 -08 000000044 INF: Y Motor: Start the move command
17-02-28 20:14:23.483 -08 000000044 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:23.484 -08 000000102 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:14:23.485 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:14:23.486 -08 000000102 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:14:23.486 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:14:23.488 -08 000000102 INF: ======================================
17-02-28 20:14:23.488 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.488 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:14:23.525 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.530 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:14:23.547 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:23.547 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:14:23.548 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:23.548 -08 000000044 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:14:23.548 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:23.615 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.621 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:14:23.647 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V1600IP7680R\r
17-02-28 20:14:23.674 -08 000000044 INF: Y Motor: Unshifted Position: 1067054
17-02-28 20:14:23.724 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:23.733 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:23.753 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.759 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:14:23.811 -08 000000050 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:23.811 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:23.811 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:23.828 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:23.829 -08 000000050 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:23.833 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:23.847 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:23.869 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.921 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:23.984 -08 000000044 INF: Y Motor: Unshifted Position: 1777139
17-02-28 20:14:23.984 -08 000000066 INF: X Motor: Xmit PR ER\n
17-02-28 20:14:24.034 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:24.046 -08 000000066 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:14:24.046 -08 000000066 INF: X Motor: Moved to 15.0010 after 687 ms
17-02-28 20:14:24.046 -08 000000066 INF: ======================================
17-02-28 20:14:24.160 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:24.164 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:14:24.171 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:24.233 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:24.300 -08 000000044 INF: Y Motor: Unshifted Position: 2552985
17-02-28 20:14:24.350 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:24.423 -08 000000050 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:24.423 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:24.423 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:24.439 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:24.441 -08 000000050 INF: ===================Camera Arm TDI===================
17-02-28 20:14:24.442 -08 000000050 INF: ======================================
17-02-28 20:14:24.444 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:24.445 -08 000000104 INF: ======================================
17-02-28 20:14:24.471 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:24.483 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:24.543 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:24.610 -08 000000044 INF: Y Motor: Unshifted Position: 3332932
17-02-28 20:14:24.660 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:24.781 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:24.793 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:24.858 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:24.923 -08 000000044 INF: Y Motor: Unshifted Position: 4118842
17-02-28 20:14:24.973 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:25.095 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:25.108 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:25.169 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:25.233 -08 000000044 INF: Y Motor: Unshifted Position: 4899616
17-02-28 20:14:25.283 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:25.405 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:25.419 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:25.480 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:25.545 -08 000000044 INF: Y Motor: Unshifted Position: 5675526
17-02-28 20:14:25.595 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:25.719 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:25.730 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:25.792 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:25.854 -08 000000044 INF: Y Motor: Unshifted Position: 5947910
17-02-28 20:14:25.854 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:25.854 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:25.919 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:25.919 -08 000000044 INF: Y Motor: Moved to 64.4791 after 2371 ms
17-02-28 20:14:25.919 -08 000000044 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:25.980 -08 000000044 INF: Y Motor: Recv v 4096\r
17-02-28 20:14:25.980 -08 000000044 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:25.980 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:26.042 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:26.042 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:26.042 -08 000000044 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:26.042 -08 000000044 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:26.105 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:26.106 -08 000000044 INF: Y Motor: Recv v 402653184\r
17-02-28 20:14:26.106 -08 000000044 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:14:26.106 -08 000000044 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:26.106 -08 000000044 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:26.168 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:26.168 -08 000000044 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:26.168 -08 000000044 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:26.168 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:26.232 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:26.232 -08 000000044 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:26.232 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:26.294 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:26.294 -08 000000044 INF: ======================================
17-02-28 20:14:26.295 -08 000000047 INF: ===================Move X,Y===================
17-02-28 20:14:26.296 -08 000000047 INF: ======================================
17-02-28 20:14:26.297 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:26.298 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:26.298 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:14:26.298 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:14:26.356 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:26.357 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:26.357 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:14:26.388 -08 000000032 INF: RunCopyService queue size at 2/28/2017 8:14:26 PM is 2
17-02-28 20:14:26.418 -08 000000100 INF: FPGA: Recv ZFREQCL
17-02-28 20:14:26.419 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:26.419 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:14:26.419 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:26.419 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:26.527 -08 000000055 INF: FPGA: Recv TDIYERD 6447910
17-02-28 20:14:26.527 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447910 counts (64.479 mm)
17-02-28 20:14:26.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:26.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:26.530 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:14:26.530 -08 000000047 INF: ===================Set YMotor gains for scans===================
17-02-28 20:14:26.531 -08 000000047 INF: ======================================
17-02-28 20:14:26.531 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:26.532 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:14:26.532 -08 000000053 INF: FPGA: Xmit TDIYPOS 6336983\n
17-02-28 20:14:26.589 -08 000000038 INF: FPGA: Recv TDIYPOS
17-02-28 20:14:26.590 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:26.591 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:14:26.592 -08 000000053 INF: FPGA: Xmit TDIYARM3 139264 6427908 1 1\n
17-02-28 20:14:26.649 -08 000000095 INF: FPGA: Recv TDIYARM3
17-02-28 20:14:26.650 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:26.651 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:14:26.653 -08 000000053 INF: ======================================
17-02-28 20:14:26.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:26.656 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:26.656 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:26.657 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:26.658 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:26.659 -08 000000050 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:14:26.659 -08 000000044 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:14:26.659 -08 000000050 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:14:26.659 -08 000000050 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:14:26.659 -08 000000050 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:14:26.659 -08 000000044 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:14:26.659 -08 000000050 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:14:26.659 -08 000000044 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:14:26.659 -08 000000044 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:14:26.660 -08 000000044 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:14:26.669 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:26.712 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:26.962 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:27.025 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:27.025 -08 000000090 INF: FPGA: Recv EX2MV
17-02-28 20:14:27.025 -08 000000090 INF: FPGA: Recv EX1MV
17-02-28 20:14:27.025 -08 000000050 INF: Excitation Filter 2: Moved -107 steps in 366.2072 ms
17-02-28 20:14:27.025 -08 000000050 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.3593 ms
17-02-28 20:14:27.025 -08 000000050 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.4744 ms
17-02-28 20:14:27.026 -08 000000044 INF: Excitation Filter 1: Moved -107 steps in 366.0316 ms
17-02-28 20:14:27.026 -08 000000044 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.647 ms
17-02-28 20:14:27.026 -08 000000044 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.7736 ms
17-02-28 20:14:27.026 -08 000000050 INF: ======================================
17-02-28 20:14:27.026 -08 000000044 INF: ======================================
17-02-28 20:14:27.028 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:27.030 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:27.031 -08 000000109 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:27.031 -08 000000038 INF: ===================FPGA Z Wait===================
17-02-28 20:14:27.031 -08 000000076 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:27.031 -08 000000076 INF: Y Motor: Moving to 14.8307 mm @6.500 mm/sec, started at 64.4791 mm
17-02-28 20:14:27.031 -08 000000076 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:27.032 -08 000000076 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:27.032 -08 000000109 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:14:27.032 -08 000000109 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:14:27.033 -08 000000038 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:14:27.034 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:14:27.035 -08 000000053 INF: ===================Camera TDI, Parallel===================
17-02-28 20:14:27.036 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:14:27.037 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:27.039 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:27.039 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:27.039 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:27.039 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:27.091 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:14:27.091 -08 000000076 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:27.091 -08 000000076 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:27.152 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:14:27.152 -08 000000076 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:27.189 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:27.189 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:27.190 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:27.190 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:27.215 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:14:27.215 -08 000000076 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:27.215 -08 000000076 INF: Y Motor: Set target position to 983074 encoder counts
17-02-28 20:14:27.215 -08 000000076 INF: Y Motor: Xmit s r0xca 983074\r
17-02-28 20:14:27.275 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:14:27.275 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:27.275 -08 000000076 INF: Y Motor: Start the move command
17-02-28 20:14:27.275 -08 000000076 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:27.339 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:27.339 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:27.339 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:27.340 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:14:27.340 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:27.340 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:27.340 -08 000000076 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:14:27.340 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:27.400 -08 000000064 INF: FPGA: Recv ZWAIT 
17-02-28 20:14:27.401 -08 000000038 INF: ======================================
17-02-28 20:14:27.464 -08 000000076 INF: Y Motor: Unshifted Position: 5884320
17-02-28 20:14:27.489 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:27.489 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:27.489 -08 000000030 INF: ===================Camera #0 Frame #5===================
17-02-28 20:14:27.490 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:27.490 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:27.490 -08 000000081 INF: ===================Camera #2 Frame #5===================
17-02-28 20:14:27.514 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:27.589 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:27.638 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:27.649 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:27.661 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:14:27.661 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:14:27.661 -08 000000030 INF: ===================Camera #0 Frame #11===================
17-02-28 20:14:27.663 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:14:27.663 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:14:27.663 -08 000000081 INF: ===================Camera #2 Frame #11===================
17-02-28 20:14:27.776 -08 000000076 INF: Y Motor: Unshifted Position: 5682822
17-02-28 20:14:27.826 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:27.837 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:14:27.837 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:14:27.837 -08 000000030 INF: ===================Camera #0 Frame #18===================
17-02-28 20:14:27.841 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:14:27.841 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:14:27.841 -08 000000081 INF: ===================Camera #2 Frame #18===================
17-02-28 20:14:27.899 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:27.950 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:27.960 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:28.017 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:14:28.017 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:14:28.017 -08 000000030 INF: ===================Camera #0 Frame #24===================
17-02-28 20:14:28.022 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:14:28.022 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:14:28.022 -08 000000081 INF: ===================Camera #2 Frame #24===================
17-02-28 20:14:28.088 -08 000000076 INF: Y Motor: Unshifted Position: 5478515
17-02-28 20:14:28.138 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:28.186 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:14:28.186 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:14:28.186 -08 000000030 INF: ===================Camera #0 Frame #31===================
17-02-28 20:14:28.191 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:14:28.191 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:14:28.191 -08 000000081 INF: ===================Camera #2 Frame #31===================
17-02-28 20:14:28.210 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:28.263 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:28.272 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:28.362 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:14:28.362 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:14:28.362 -08 000000030 INF: ===================Camera #0 Frame #37===================
17-02-28 20:14:28.370 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:14:28.370 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:14:28.370 -08 000000081 INF: ===================Camera #2 Frame #37===================
17-02-28 20:14:28.400 -08 000000076 INF: Y Motor: Unshifted Position: 5275489
17-02-28 20:14:28.450 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:28.522 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:28.538 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:14:28.538 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:14:28.538 -08 000000030 INF: ===================Camera #0 Frame #43===================
17-02-28 20:14:28.549 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:14:28.549 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:14:28.549 -08 000000081 INF: ===================Camera #2 Frame #44===================
17-02-28 20:14:28.574 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:28.585 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:28.712 -08 000000076 INF: Y Motor: Unshifted Position: 5072692
17-02-28 20:14:28.715 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:14:28.715 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:14:28.715 -08 000000030 INF: ===================Camera #0 Frame #50===================
17-02-28 20:14:28.733 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51.
17-02-28 20:14:28.733 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51
17-02-28 20:14:28.733 -08 000000081 INF: ===================Camera #2 Frame #51===================
17-02-28 20:14:28.762 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:28.835 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:28.887 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:28.893 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:14:28.893 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:14:28.893 -08 000000030 INF: ===================Camera #0 Frame #57===================
17-02-28 20:14:28.898 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:28.911 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:14:28.911 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:14:28.911 -08 000000081 INF: ===================Camera #2 Frame #57===================
17-02-28 20:14:29.024 -08 000000076 INF: Y Motor: Unshifted Position: 4870329
17-02-28 20:14:29.068 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:14:29.068 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:14:29.068 -08 000000030 INF: ===================Camera #0 Frame #63===================
17-02-28 20:14:29.074 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:29.089 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64.
17-02-28 20:14:29.089 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64
17-02-28 20:14:29.089 -08 000000081 INF: ===================Camera #2 Frame #64===================
17-02-28 20:14:29.148 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:29.197 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:29.208 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:29.244 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:14:29.244 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:14:29.244 -08 000000030 INF: ===================Camera #0 Frame #69===================
17-02-28 20:14:29.272 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:14:29.272 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:14:29.272 -08 000000081 INF: ===================Camera #2 Frame #70===================
17-02-28 20:14:29.336 -08 000000076 INF: Y Motor: Unshifted Position: 4666874
17-02-28 20:14:29.386 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:29.421 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:14:29.421 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:14:29.421 -08 000000030 INF: ===================Camera #0 Frame #76===================
17-02-28 20:14:29.445 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:14:29.445 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:14:29.445 -08 000000081 INF: ===================Camera #2 Frame #77===================
17-02-28 20:14:29.458 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:29.511 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:29.521 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:29.521 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:29.521 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:29.522 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:14:29.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:14:29.592 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:14:29.592 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:14:29.592 -08 000000030 INF: ===================Camera #0 Frame #82===================
17-02-28 20:14:29.617 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:14:29.617 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:14:29.617 -08 000000081 INF: ===================Camera #2 Frame #83===================
17-02-28 20:14:29.646 -08 000000076 INF: Y Motor: Unshifted Position: 4465357
17-02-28 20:14:29.696 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:29.761 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:14:29.761 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:14:29.761 -08 000000030 INF: ===================Camera #0 Frame #88===================
17-02-28 20:14:29.786 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:14:29.786 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:14:29.786 -08 000000081 INF: ===================Camera #2 Frame #89===================
17-02-28 20:14:29.823 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:29.929 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:14:29.929 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:14:29.929 -08 000000030 INF: ===================Camera #0 Frame #95===================
17-02-28 20:14:29.955 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:14:29.955 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:14:29.955 -08 000000081 INF: ===================Camera #2 Frame #96===================
17-02-28 20:14:29.959 -08 000000076 INF: Y Motor: Unshifted Position: 4260405
17-02-28 20:14:30.009 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.102 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:14:30.102 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:14:30.102 -08 000000030 INF: ===================Camera #0 Frame #101===================
17-02-28 20:14:30.129 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:14:30.129 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:14:30.129 -08 000000081 INF: ===================Camera #2 Frame #102===================
17-02-28 20:14:30.133 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.271 -08 000000076 INF: Y Motor: Unshifted Position: 4058022
17-02-28 20:14:30.271 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:14:30.271 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:14:30.271 -08 000000030 INF: ===================Camera #0 Frame #107===================
17-02-28 20:14:30.300 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:14:30.300 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:14:30.300 -08 000000081 INF: ===================Camera #2 Frame #108===================
17-02-28 20:14:30.321 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.440 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:14:30.440 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:14:30.440 -08 000000030 INF: ===================Camera #0 Frame #113===================
17-02-28 20:14:30.445 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.469 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:14:30.469 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:14:30.469 -08 000000081 INF: ===================Camera #2 Frame #115===================
17-02-28 20:14:30.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:30.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:14:30.584 -08 000000076 INF: Y Motor: Unshifted Position: 3855226
17-02-28 20:14:30.608 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:14:30.608 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:14:30.608 -08 000000030 INF: ===================Camera #0 Frame #120===================
17-02-28 20:14:30.634 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.641 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:14:30.641 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:14:30.641 -08 000000081 INF: ===================Camera #2 Frame #121===================
17-02-28 20:14:30.760 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.780 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:14:30.780 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:14:30.780 -08 000000030 INF: ===================Camera #0 Frame #126===================
17-02-28 20:14:30.811 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:14:30.811 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:14:30.811 -08 000000081 INF: ===================Camera #2 Frame #127===================
17-02-28 20:14:30.894 -08 000000076 INF: Y Motor: Unshifted Position: 3653507
17-02-28 20:14:30.944 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.948 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:14:30.948 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:14:30.948 -08 000000030 INF: ===================Camera #0 Frame #132===================
17-02-28 20:14:30.980 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:14:30.980 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:14:30.980 -08 000000081 INF: ===================Camera #2 Frame #133===================
17-02-28 20:14:31.071 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:31.116 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:14:31.116 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:14:31.116 -08 000000030 INF: ===================Camera #0 Frame #138===================
17-02-28 20:14:31.149 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:14:31.149 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:14:31.149 -08 000000081 INF: ===================Camera #2 Frame #140===================
17-02-28 20:14:31.209 -08 000000076 INF: Y Motor: Unshifted Position: 3450051
17-02-28 20:14:31.259 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:31.284 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:14:31.284 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:14:31.284 -08 000000030 INF: ===================Camera #0 Frame #145===================
17-02-28 20:14:31.322 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:14:31.322 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:14:31.322 -08 000000081 INF: ===================Camera #2 Frame #146===================
17-02-28 20:14:31.381 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:31.455 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:14:31.455 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:14:31.455 -08 000000030 INF: ===================Camera #0 Frame #151===================
17-02-28 20:14:31.491 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:14:31.491 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:14:31.491 -08 000000081 INF: ===================Camera #2 Frame #152===================
17-02-28 20:14:31.520 -08 000000076 INF: Y Motor: Unshifted Position: 3246608
17-02-28 20:14:31.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:31.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:14:31.570 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:31.623 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:14:31.623 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:14:31.623 -08 000000030 INF: ===================Camera #0 Frame #157===================
17-02-28 20:14:31.660 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:14:31.660 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:14:31.660 -08 000000081 INF: ===================Camera #2 Frame #158===================
17-02-28 20:14:31.694 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:31.791 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:14:31.791 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:14:31.791 -08 000000030 INF: ===================Camera #0 Frame #163===================
17-02-28 20:14:31.829 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:14:31.829 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:14:31.829 -08 000000081 INF: ===================Camera #2 Frame #165===================
17-02-28 20:14:31.830 -08 000000076 INF: Y Motor: Unshifted Position: 3044901
17-02-28 20:14:31.880 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:31.960 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:14:31.960 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:14:31.960 -08 000000030 INF: ===================Camera #0 Frame #169===================
17-02-28 20:14:32.001 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:14:32.001 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:14:32.001 -08 000000081 INF: ===================Camera #2 Frame #171===================
17-02-28 20:14:32.007 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.128 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:14:32.128 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:14:32.128 -08 000000030 INF: ===================Camera #0 Frame #176===================
17-02-28 20:14:32.143 -08 000000076 INF: Y Motor: Unshifted Position: 2841237
17-02-28 20:14:32.170 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:14:32.170 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:14:32.170 -08 000000081 INF: ===================Camera #2 Frame #177===================
17-02-28 20:14:32.193 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.299 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:14:32.299 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:14:32.299 -08 000000030 INF: ===================Camera #0 Frame #182===================
17-02-28 20:14:32.319 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.339 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:14:32.339 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:14:32.339 -08 000000081 INF: ===================Camera #2 Frame #183===================
17-02-28 20:14:32.456 -08 000000076 INF: Y Motor: Unshifted Position: 2637565
17-02-28 20:14:32.467 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:14:32.467 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:14:32.467 -08 000000030 INF: ===================Camera #0 Frame #188===================
17-02-28 20:14:32.506 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.508 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:14:32.508 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:14:32.508 -08 000000081 INF: ===================Camera #2 Frame #190===================
17-02-28 20:14:32.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:32.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:14:32.630 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.635 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:14:32.635 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:14:32.635 -08 000000030 INF: ===================Camera #0 Frame #194===================
17-02-28 20:14:32.680 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:14:32.680 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:14:32.680 -08 000000081 INF: ===================Camera #2 Frame #196===================
17-02-28 20:14:32.766 -08 000000076 INF: Y Motor: Unshifted Position: 2436078
17-02-28 20:14:32.803 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:14:32.803 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:14:32.803 -08 000000030 INF: ===================Camera #0 Frame #200===================
17-02-28 20:14:32.816 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.849 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:14:32.849 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:14:32.849 -08 000000081 INF: ===================Camera #2 Frame #202===================
17-02-28 20:14:32.943 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.971 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:14:32.971 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:14:32.971 -08 000000030 INF: ===================Camera #0 Frame #207===================
17-02-28 20:14:33.018 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:14:33.018 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:14:33.018 -08 000000081 INF: ===================Camera #2 Frame #208===================
17-02-28 20:14:33.079 -08 000000076 INF: Y Motor: Unshifted Position: 2232624
17-02-28 20:14:33.129 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:33.142 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:14:33.142 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:14:33.142 -08 000000030 INF: ===================Camera #0 Frame #213===================
17-02-28 20:14:33.187 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:14:33.187 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:14:33.187 -08 000000081 INF: ===================Camera #2 Frame #215===================
17-02-28 20:14:33.253 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:33.310 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:14:33.310 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:14:33.310 -08 000000030 INF: ===================Camera #0 Frame #219===================
17-02-28 20:14:33.359 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:14:33.359 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:14:33.359 -08 000000081 INF: ===================Camera #2 Frame #221===================
17-02-28 20:14:33.392 -08 000000076 INF: Y Motor: Unshifted Position: 2031121
17-02-28 20:14:33.442 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:33.478 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:14:33.478 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:14:33.478 -08 000000030 INF: ===================Camera #0 Frame #225===================
17-02-28 20:14:33.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:33.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:14:33.528 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:14:33.528 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:14:33.528 -08 000000081 INF: ===================Camera #2 Frame #227===================
17-02-28 20:14:33.566 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:33.646 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:14:33.646 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:14:33.646 -08 000000030 INF: ===================Camera #0 Frame #232===================
17-02-28 20:14:33.697 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:14:33.697 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:14:33.697 -08 000000081 INF: ===================Camera #2 Frame #233===================
17-02-28 20:14:33.702 -08 000000076 INF: Y Motor: Unshifted Position: 1827449
17-02-28 20:14:33.752 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:33.817 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:14:33.817 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:14:33.817 -08 000000030 INF: ===================Camera #0 Frame #238===================
17-02-28 20:14:33.866 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:14:33.866 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:14:33.866 -08 000000081 INF: ===================Camera #2 Frame #240===================
17-02-28 20:14:33.879 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:33.985 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:14:33.985 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:14:33.985 -08 000000030 INF: ===================Camera #0 Frame #244===================
17-02-28 20:14:34.015 -08 000000076 INF: Y Motor: Unshifted Position: 1623790
17-02-28 20:14:34.038 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:14:34.038 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:14:34.038 -08 000000081 INF: ===================Camera #2 Frame #246===================
17-02-28 20:14:34.065 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:34.153 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:14:34.153 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:14:34.153 -08 000000030 INF: ===================Camera #0 Frame #250===================
17-02-28 20:14:34.189 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:34.207 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:14:34.207 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:14:34.207 -08 000000081 INF: ===================Camera #2 Frame #252===================
17-02-28 20:14:34.321 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:14:34.321 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:14:34.321 -08 000000030 INF: ===================Camera #0 Frame #256===================
17-02-28 20:14:34.326 -08 000000076 INF: Y Motor: Unshifted Position: 1422287
17-02-28 20:14:34.376 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:34.376 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:14:34.376 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:14:34.376 -08 000000081 INF: ===================Camera #2 Frame #258===================
17-02-28 20:14:34.489 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:14:34.489 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:14:34.489 -08 000000030 INF: ===================Camera #0 Frame #263===================
17-02-28 20:14:34.503 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:34.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:34.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:34.522 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:14:34.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:34.545 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:14:34.545 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:14:34.545 -08 000000081 INF: ===================Camera #2 Frame #265===================
17-02-28 20:14:34.621 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:14:34.639 -08 000000076 INF: Y Motor: Unshifted Position: 1217961
17-02-28 20:14:34.662 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:14:34.662 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:14:34.662 -08 000000030 INF: ===================Camera #0 Frame #269===================
17-02-28 20:14:34.689 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:34.700 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`7680 (0x03)\r\n(0xFF)
17-02-28 20:14:34.700 -08 000000042 INF: Current Position of Pump is: 7680
17-02-28 20:14:34.719 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:14:34.719 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:14:34.719 -08 000000081 INF: ===================Camera #2 Frame #271===================
17-02-28 20:14:34.763 -08 000000085 INF: FPGA: Recv TDIYWAIT
17-02-28 20:14:34.765 -08 000000109 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:34.766 -08 000000109 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:14:34.767 -08 000000037 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:14:34.767 -08 000000010 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:14:34.767 -08 000000037 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:14:34.767 -08 000000037 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:14:34.767 -08 000000037 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:14:34.767 -08 000000010 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:14:34.767 -08 000000037 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:14:34.768 -08 000000010 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:14:34.768 -08 000000010 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:14:34.769 -08 000000010 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:14:34.800 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:14:34.814 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:34.832 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:34.832 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:34.832 -08 000000030 INF: ===================Camera #0 Frame #272===================
17-02-28 20:14:34.842 -08 000000030 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:34.843 -08 000000030 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:34.886 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`7680 (0x03)\r\n(0xFF)
17-02-28 20:14:34.886 -08 000000042 INF: Current Position of Pump is: 7680
17-02-28 20:14:34.886 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:14:34.953 -08 000000076 INF: Y Motor: Unshifted Position: 1016462
17-02-28 20:14:34.978 -08 000000030 INF: Camera #0 ReleaseBuffer
17-02-28 20:14:34.978 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:34.978 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:34.978 -08 000000081 INF: ===================Camera #2 Frame #272===================
17-02-28 20:14:34.978 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:14:34.982 -08 000000081 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:34.983 -08 000000081 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:34.986 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD7680R\r
17-02-28 20:14:35.003 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:35.009 -08 000000030 INF: ======================================
17-02-28 20:14:35.076 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:35.138 -08 000000098 INF: FPGA: Recv EX1MV
17-02-28 20:14:35.138 -08 000000098 INF: FPGA: Recv EX2MV
17-02-28 20:14:35.138 -08 000000010 INF: Excitation Filter 2: Moved 107 steps in 370.0967 ms
17-02-28 20:14:35.138 -08 000000010 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.232 ms
17-02-28 20:14:35.138 -08 000000037 INF: Excitation Filter 1: Moved 107 steps in 370.3335 ms
17-02-28 20:14:35.138 -08 000000037 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.4624 ms
17-02-28 20:14:35.138 -08 000000037 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.5673 ms
17-02-28 20:14:35.138 -08 000000010 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.305 ms
17-02-28 20:14:35.138 -08 000000037 INF: ======================================
17-02-28 20:14:35.138 -08 000000010 INF: ======================================
17-02-28 20:14:35.139 -08 000000076 INF: Y Motor: Unshifted Position: 983073
17-02-28 20:14:35.139 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:35.139 -08 000000076 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:35.140 -08 000000109 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:35.141 -08 000000109 INF: ======================================
17-02-28 20:14:35.153 -08 000000081 INF: Camera #2 ReleaseBuffer
17-02-28 20:14:35.153 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:35.176 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:35.188 -08 000000081 INF: ======================================
17-02-28 20:14:35.189 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:14:35.191 -08 000000053 INF: ======================================
17-02-28 20:14:35.200 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:35.201 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:14:35.201 -08 000000076 INF: Y Motor: Moved to 14.8307 after 7861 ms
17-02-28 20:14:35.201 -08 000000076 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:35.264 -08 000000076 INF: Y Motor: Recv v 4097\r
17-02-28 20:14:35.264 -08 000000076 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:35.264 -08 000000076 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:35.325 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:14:35.325 -08 000000076 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:35.325 -08 000000076 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:35.387 -08 000000076 INF: Y Motor: Recv v 134217728\r
17-02-28 20:14:35.387 -08 000000076 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:14:35.387 -08 000000076 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:35.387 -08 000000076 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:35.449 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:14:35.449 -08 000000076 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:35.449 -08 000000076 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:35.449 -08 000000076 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:35.450 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:35.512 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:35.513 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:14:35.513 -08 000000076 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:35.513 -08 000000076 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:35.577 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:14:35.577 -08 000000076 INF: ======================================
17-02-28 20:14:35.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:35.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:35.580 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:35.580 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:14:35.634 -08 000000098 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:14:35.634 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:35.699 -08 000000069 INF: FPGA: Recv TDIYERD 1483075
17-02-28 20:14:35.699 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:14:35.761 -08 000000081 INF: FPGA: Recv ZADCR 31896
17-02-28 20:14:35.761 -08 000000018 INF: At scan end Y pos = 14.831 and Z pos = -0.122. Y moved -48.539 mm
17-02-28 20:14:35.761 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:14:35.762 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:35.823 -08 000000076 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:14:35.823 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:14:35.823 -08 000000018 INF: TDIScan finished after 12672.918 ms
17-02-28 20:14:35.823 -08 000000018 INF: Image[0]: Y should trigger at 63.370 mm, 2nd row was at 64.279 mm (error = 0.909 mm)
17-02-28 20:14:35.823 -08 000000018 INF: Image[2]: Y should trigger at 63.370 mm, 2nd row was at 64.279 mm (error = 0.909 mm)
17-02-28 20:14:35.824 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:35.825 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:35.860 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.871 um
17-02-28 20:14:35.860 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:35.861 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:14:35.885 -08 000000010 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:14:35.885 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:35.886 -08 000000090 INF: ===================Dither Clean Up Command===================
17-02-28 20:14:35.886 -08 000000057 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:14:35.886 -08 000000108 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:14:35.886 -08 000000055 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:14:35.886 -08 000000108 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:35.886 -08 000000108 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:35.887 -08 000000055 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:14:35.887 -08 000000055 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:14:35.887 -08 000000057 INF: ======================================
17-02-28 20:14:35.887 -08 000000069 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:35.887 -08 000000034 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:35.888 -08 000000069 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:14:35.890 -08 000000034 INF: ===================LFT:Extracting coords===================
17-02-28 20:14:35.916 -08 000000034 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:35.916 -08 000000034 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:14:35.917 -08 000000029 INF: ===================LookupFocusTracking===================
17-02-28 20:14:35.917 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:14:35.917 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:14:35.917 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:14:35.918 -08 000000029 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:35.918 -08 000000076 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:35.918 -08 000000109 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:35.918 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:35.947 -08 000000100 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:35.947 -08 000000100 INF: FPGA: Recv ZSEL 
17-02-28 20:14:35.947 -08 000000069 INF: FPGA: Xmit ZDACW 32222\n
17-02-28 20:14:35.947 -08 000000055 INF: ======================================
17-02-28 20:14:35.949 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:14:35.949 -08 000000108 INF: ======================================
17-02-28 20:14:35.992 -08 000000029 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:35.992 -08 000000076 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:35.992 -08 000000109 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:35.992 -08 000000052 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:36.009 -08 000000051 INF: FPGA: Recv ZDACW 
17-02-28 20:14:36.009 -08 000000069 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:14:36.010 -08 000000069 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:14:36.071 -08 000000102 INF: FPGA: Recv TDIBB
17-02-28 20:14:36.071 -08 000000069 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:36.072 -08 000000069 INF: ======================================
17-02-28 20:14:36.074 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:36.134 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:36.143 -08 000000029 INF: LFT found best fwhm score 2.00048 in 151 ms
17-02-28 20:14:36.143 -08 000000052 INF: LFT found best fwhm score 2.178101 in 151 ms
17-02-28 20:14:36.143 -08 000000052 INF: LFT found good score at index 6733 with fwhm value 2.178101. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:36.143 -08 000000109 INF: LFT found best fwhm score 2.000187 in 151 ms
17-02-28 20:14:36.143 -08 000000109 INF: LFT found good score at index 7589 with fwhm value 2.000187. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:36.143 -08 000000076 INF: LFT found best fwhm score 2.000625 in 151 ms
17-02-28 20:14:36.143 -08 000000076 INF: LFT found good score at index 4013 with fwhm value 2.000625. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:36.144 -08 000000029 INF: LFT found good score at index 6921 with fwhm value 2.00048. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:36.144 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:14:36.144 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:14:36.144 -08 000000029 INF: ===================LookupFocusTracking===================
17-02-28 20:14:36.144 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:14:36.144 -08 000000109 INF: ======================================
17-02-28 20:14:36.144 -08 000000029 INF: ======================================
17-02-28 20:14:36.144 -08 000000052 INF: ======================================
17-02-28 20:14:36.144 -08 000000076 INF: ======================================
17-02-28 20:14:36.145 -08 000000034 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:36.146 -08 000000034 INF: LFT weighted average best Z for top surface is at -0.126mm FC:A, C:3,L:4,T
17-02-28 20:14:36.146 -08 000000034 INF: ======================================
17-02-28 20:14:36.148 -08 000000090 INF: ======================================
17-02-28 20:14:36.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:36.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:14:36.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:36.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:14:36.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:36.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:14:36.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:36.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:14:36.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:36.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011===================
17-02-28 20:14:36.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011===================
17-02-28 20:14:36.152 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:14:36.152 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011===================
17-02-28 20:14:36.152 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Dispensing port PortC, Waiting for image analysis===================
17-02-28 20:14:36.152 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:14:36.175 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:14:36.175 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:36.175 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:36.175 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:36.176 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:14:36.176 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:36.176 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:14:36.193 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.219 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":4,"Tile":1202,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF246","HCSMMF267","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.277 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:36.277 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:36.327 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:36.327 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.328 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:14:36.328 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:14:36.394 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:36.395 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":4,"Tile":1201,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF287","HCSMMF243","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.396 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":4,"Tile":1204,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF258","HCSMMF207","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.400 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":4,"Tile":1210,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF229","HCSMMF211","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.404 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":4,"Tile":1205,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF190","HCSMMF215","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.407 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":4,"Tile":1209,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF214","HCSMMF275","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.409 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":4,"Tile":1207,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF212","HCSMMF202","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.412 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":4,"Tile":1203,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF257","HCSMMF236","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.415 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":4,"Tile":1206,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF277","HCSMMF248","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.417 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":4,"Tile":1213,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF195","HCSMMF273","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.419 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":4,"Tile":1214,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF274","HCSMMF191","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.420 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":4,"Tile":1208,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF231","HCSMMF278","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.421 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":4,"Tile":1212,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF265","HCSMMF232","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.423 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":4,"Tile":1211,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF182","HCSMMF219","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.423 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":4,"Tile":1217,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF244","HCSMMF192","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.424 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":4,"Tile":1218,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF252","HCSMMF217","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.425 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":4,"Tile":1216,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF245","HCSMMF284","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.426 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":4,"Tile":1223,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF269","HCSMMF262","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.427 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":4,"Tile":1215,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF283","HCSMMF199","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.428 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":4,"Tile":1222,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF220","HCSMMF251","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.429 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":4,"Tile":1219,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF254","HCSMMF206","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.430 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":4,"Tile":1221,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF184","HCSMMF221","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.431 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":4,"Tile":1220,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF185","HCSMMF222","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.433 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":4,"Tile":1225,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF256","HCSMMF234","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.437 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":4,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF249","HCSMMF286","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.438 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":4,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF178","HCSMMF233","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.442 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":4,"Tile":1224,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF188","HCSMMF280","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.443 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":4,"Tile":1228,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF213","HCSMMF241","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.446 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:36.449 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:36.449 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:36.449 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:14:36.452 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:14:36.545 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:36.545 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:14:36.583 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:36.588 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:14:36.672 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:36.678 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:14:36.698 -08 000000047 INF: FPGA: Recv MIOCOMPR
17-02-28 20:14:36.698 -08 000000018 INF: Compensator: Moved OutOfPath in 370 ms
17-02-28 20:14:36.698 -08 000000018 INF: Lane 5, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:14:36.699 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.699 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.700 -08 000000030 INF: ===================Move Tilt Motor 1===================
17-02-28 20:14:36.700 -08 000000101 INF: ===================Move Tilt Motor 3===================
17-02-28 20:14:36.700 -08 000000109 INF: ===================Move Tilt Motor 2===================
17-02-28 20:14:36.701 -08 000000030 INF: ======================================
17-02-28 20:14:36.701 -08 000000101 INF: ======================================
17-02-28 20:14:36.701 -08 000000109 INF: ======================================
17-02-28 20:14:36.702 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.702 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.709 -08 000000018 INF: Transformed XStagePosition from 17.19893 mm to 17.1989307403564 mm.
17-02-28 20:14:36.717 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:14:36.717 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:14:36.717 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:14:36.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:36.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:36.721 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:14:36.721 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:14:36.722 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:14:36.760 -08 000000085 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:36.760 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:36.761 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:14:36.761 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1229 mm
17-02-28 20:14:36.761 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:14:36.777 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:36.783 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:14:36.825 -08 000000047 INF: FPGA: Recv ZTRG 
17-02-28 20:14:36.825 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:14:36.884 -08 000000095 INF: FPGA: Recv ZYT 
17-02-28 20:14:36.884 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:14:36.884 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:14:36.947 -08 000000032 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:14:36.947 -08 000000032 INF: FPGA: Recv ZMV 
17-02-28 20:14:36.947 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:14:36.947 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.5476 ms
17-02-28 20:14:36.947 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:14:36.968 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:37.008 -08 000000095 INF: FPGA: Recv ZDACR 60292
17-02-28 20:14:37.008 -08 000000018 INF: Z Motor: MoveAndTrigger took 247.4068 ms w/comms
17-02-28 20:14:37.008 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:14:37.008 -08 000000018 INF: Z Motor: MoveAbsStepped took 247.5794 ms
17-02-28 20:14:37.009 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:37.009 -08 000000018 INF: Transformed XStagePosition from 17.19893 mm to 17.1989307403564 mm.
17-02-28 20:14:37.018 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:14:37.018 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:37.018 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:37.018 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:14:37.018 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:14:37.070 -08 000000032 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:37.081 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:37.081 -08 000000018 INF: Transformed XStagePosition from 17.19893 mm to 17.1989307403564 mm.
17-02-28 20:14:37.090 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:14:37.090 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:37.090 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:37.092 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:37.092 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:14:37.092 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:37.092 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = E_1
17-02-28 20:14:37.092 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:37.093 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:37.094 -08 000000058 INF: ===================MoveEmissionFilters===================
17-02-28 20:14:37.094 -08 000000086 INF: ===================Move X,Y===================
17-02-28 20:14:37.095 -08 000000086 INF: ===================Move X,Y, Parallel===================
17-02-28 20:14:37.095 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:37.095 -08 000000066 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:37.095 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:37.095 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:37.096 -08 000000098 INF: ===================Move X Motor without settling===================
17-02-28 20:14:37.096 -08 000000029 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:37.096 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:37.096 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:37.096 -08 000000098 INF: X Motor: Xmit PR VM\n
17-02-28 20:14:37.096 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:37.096 -08 000000066 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:37.096 -08 000000029 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8307 mm
17-02-28 20:14:37.096 -08 000000029 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:37.096 -08 000000029 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:37.097 -08 000000089 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:14:37.097 -08 000000069 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:14:37.097 -08 000000045 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:14:37.097 -08 000000064 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:14:37.097 -08 000000069 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:14:37.097 -08 000000101 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:14:37.097 -08 000000062 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:14:37.097 -08 000000064 INF: ======================================
17-02-28 20:14:37.097 -08 000000062 INF: ======================================
17-02-28 20:14:37.098 -08 000000037 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:14:37.098 -08 000000087 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:14:37.098 -08 000000089 INF: ======================================
17-02-28 20:14:37.098 -08 000000087 INF: ======================================
17-02-28 20:14:37.098 -08 000000037 INF: ======================================
17-02-28 20:14:37.100 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:37.100 -08 000000069 INF: ======================================
17-02-28 20:14:37.100 -08 000000045 INF: ======================================
17-02-28 20:14:37.100 -08 000000101 INF: ======================================
17-02-28 20:14:37.101 -08 000000095 INF: ======================================
17-02-28 20:14:37.101 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:37.102 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:37.102 -08 000000066 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:37.103 -08 000000051 INF: ======================================
17-02-28 20:14:37.103 -08 000000076 INF: ======================================
17-02-28 20:14:37.103 -08 000000066 INF: ======================================
17-02-28 20:14:37.104 -08 000000058 INF: ======================================
17-02-28 20:14:37.138 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:14:37.138 -08 000000029 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:37.138 -08 000000029 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:37.139 -08 000000098 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:14:37.139 -08 000000098 INF: X Motor: Xmit PR VI\n
17-02-28 20:14:37.197 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:14:37.197 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:37.198 -08 000000098 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:14:37.198 -08 000000098 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:14:37.198 -08 000000098 INF: X Motor: Moving to 17.1989 mm @15.000 mm/sec, started at 15.0010 mm
17-02-28 20:14:37.198 -08 000000098 INF: X Motor: Xmit MA -17122\n
17-02-28 20:14:37.259 -08 000000098 INF: X Motor: Recv MA -17122\r\n>
17-02-28 20:14:37.259 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:14:37.259 -08 000000098 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:14:37.261 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:14:37.261 -08 000000029 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:37.261 -08 000000029 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:14:37.261 -08 000000029 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:14:37.324 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:14:37.324 -08 000000029 INF: Y Motor: Start the move command
17-02-28 20:14:37.324 -08 000000029 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:37.386 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:14:37.386 -08 000000029 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:14:37.386 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:37.510 -08 000000029 INF: Y Motor: Unshifted Position: 1062892
17-02-28 20:14:37.549 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:14:37.560 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:37.635 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:37.686 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:37.735 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:37.821 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:37.823 -08 000000029 INF: Y Motor: Unshifted Position: 1769735
17-02-28 20:14:37.873 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:37.884 -08 000000098 INF: X Motor: Xmit PR ER\n
17-02-28 20:14:37.946 -08 000000098 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:14:37.946 -08 000000098 INF: X Motor: Moved to 17.1982 after 686 ms
17-02-28 20:14:37.946 -08 000000098 INF: ======================================
17-02-28 20:14:37.996 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:38.071 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:38.134 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:38.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:38.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-02-28 20:14:38.135 -08 000000029 INF: Y Motor: Unshifted Position: 2555591
17-02-28 20:14:38.185 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:38.310 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:38.445 -08 000000029 INF: Y Motor: Unshifted Position: 3333038
17-02-28 20:14:38.495 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:38.622 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:38.758 -08 000000029 INF: Y Motor: Unshifted Position: 4113938
17-02-28 20:14:38.808 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:38.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:38.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:38.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:38.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:14:38.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:38.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:38.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:38.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:14:38.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:14:38.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°, FC temperature to 60°===================
17-02-28 20:14:38.932 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:39.069 -08 000000029 INF: Y Motor: Unshifted Position: 4896379
17-02-28 20:14:39.119 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:39.246 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:39.316 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:14:39.316 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:14:39.317 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:14:39.317 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:14:39.318 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:39.318 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:39.318 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:39.319 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:39.381 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:39.381 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Selecting Reagent HIM (1)===================
17-02-28 20:14:39.381 -08 000000042 INF: Valve B1: Go to position 1
17-02-28 20:14:39.381 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:14:39.382 -08 000000029 INF: Y Motor: Unshifted Position: 5670909
17-02-28 20:14:39.432 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:39.442 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 8\r
17-02-28 20:14:39.442 -08 000000042 INF: Valve B1: 18.389 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:14:39.442 -08 000000042 INF: Valve B1: Taking shortest path 'CW' from 8 to 1
17-02-28 20:14:39.442 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CW1\r
17-02-28 20:14:39.442 -08 000000042 INF: SerialPort B1 (VICIB1): Recv  (discarded)
17-02-28 20:14:39.442 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:14:39.558 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:39.694 -08 000000029 INF: Y Motor: Unshifted Position: 5947055
17-02-28 20:14:39.694 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:39.694 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:39.756 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:14:39.756 -08 000000029 INF: Y Motor: Moved to 64.4706 after 2370 ms
17-02-28 20:14:39.756 -08 000000029 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:39.818 -08 000000029 INF: Y Motor: Recv v 4096\r
17-02-28 20:14:39.818 -08 000000029 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:39.818 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:39.879 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 1\r
17-02-28 20:14:39.879 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:39.879 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:14:39.880 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:14:39.880 -08 000000029 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:39.880 -08 000000029 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:39.946 -08 000000029 INF: Y Motor: Recv v 402653184\r
17-02-28 20:14:39.946 -08 000000029 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:14:39.946 -08 000000029 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:39.946 -08 000000029 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:40.017 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:14:40.017 -08 000000029 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:40.017 -08 000000029 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:40.017 -08 000000029 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:40.068 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:14:40.068 -08 000000029 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:40.068 -08 000000029 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:40.130 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:14:40.130 -08 000000029 INF: ======================================
17-02-28 20:14:40.131 -08 000000086 INF: ===================Move X,Y===================
17-02-28 20:14:40.132 -08 000000086 INF: ======================================
17-02-28 20:14:40.134 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:40.134 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:40.135 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:14:40.135 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:14:40.192 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:40.192 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:14:40.256 -08 000000104 INF: FPGA: Recv ZFREQCL
17-02-28 20:14:40.257 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:14:40.257 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:40.257 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:40.315 -08 000000038 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:14:40.315 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:14:40.316 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:40.317 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:40.318 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:14:40.318 -08 000000044 INF: ===================Set YMotor gains for scans===================
17-02-28 20:14:40.318 -08 000000010 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:14:40.319 -08 000000044 INF: ======================================
17-02-28 20:14:40.319 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:14:40.320 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:14:40.321 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:14:40.321 -08 000000010 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:14:40.377 -08 000000102 INF: FPGA: Recv TDIYPOS
17-02-28 20:14:40.377 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:14:40.379 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:14:40.379 -08 000000010 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:14:40.440 -08 000000037 INF: FPGA: Recv TDIYARM2
17-02-28 20:14:40.441 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:14:40.442 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:14:40.443 -08 000000010 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:14:40.444 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:14:40.445 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:14:40.446 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:14:40.447 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:40.501 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:40.501 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:40.502 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:40.566 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:40.574 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 1, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 50, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:14:40.666 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:14:40.755 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:14:40.755 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:14:40.817 -08 000000010 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:14:40.817 -08 000000010 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:14:40.817 -08 000000010 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:40.832 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:14:40.835 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:40.855 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:14:40.941 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:41.041 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:41.127 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:41.225 -08 000000010 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:14:41.225 -08 000000010 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:14:41.225 -08 000000010 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:41.241 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:14:41.243 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:14:41.245 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:14:41.247 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:41.248 -08 000000010 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:14:41.249 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:41.251 -08 000000010 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:14:41.252 -08 000000010 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:14:41.252 -08 000000010 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:14:41.252 -08 000000010 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:14:41.315 -08 000000104 INF: FPGA: Recv ZYT 
17-02-28 20:14:41.315 -08 000000010 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:14:41.315 -08 000000010 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:14:41.377 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:41.377 -08 000000032 INF: FPGA: Recv ZARM
17-02-28 20:14:41.377 -08 000000010 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.2188 ms
17-02-28 20:14:41.377 -08 000000010 INF: Z Motor: ArmAbsStepped took 125.7475 ms
17-02-28 20:14:41.378 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:41.379 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:14:41.380 -08 000000010 INF: ======================================
17-02-28 20:14:41.382 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:41.383 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:41.383 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:41.383 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:41.384 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:41.385 -08 000000038 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:14:41.385 -08 000000062 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:14:41.385 -08 000000038 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:14:41.385 -08 000000038 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:14:41.385 -08 000000038 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:14:41.385 -08 000000062 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:14:41.385 -08 000000038 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:14:41.385 -08 000000062 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:14:41.385 -08 000000062 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:14:41.386 -08 000000062 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:14:41.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:41.540 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:14:41.626 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:41.726 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:41.752 -08 000000087 INF: FPGA: Recv EX2MV
17-02-28 20:14:41.752 -08 000000087 INF: FPGA: Recv EX1MV
17-02-28 20:14:41.752 -08 000000062 INF: Excitation Filter 1: Moved -107 steps in 366.8759 ms
17-02-28 20:14:41.752 -08 000000062 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.0828 ms
17-02-28 20:14:41.752 -08 000000062 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.1811 ms
17-02-28 20:14:41.752 -08 000000038 INF: Excitation Filter 2: Moved -107 steps in 367.0432 ms
17-02-28 20:14:41.752 -08 000000038 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.4565 ms
17-02-28 20:14:41.752 -08 000000038 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.5256 ms
17-02-28 20:14:41.753 -08 000000062 INF: ======================================
17-02-28 20:14:41.753 -08 000000038 INF: ======================================
17-02-28 20:14:41.754 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:41.755 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:41.756 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:14:41.756 -08 000000101 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:41.756 -08 000000047 INF: ===================Serial===================
17-02-28 20:14:41.757 -08 000000101 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:14:41.757 -08 000000058 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:41.757 -08 000000101 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:41.757 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:41.757 -08 000000010 INF: ===================Camera TDI, Parallel===================
17-02-28 20:14:41.758 -08 000000047 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:14:41.758 -08 000000047 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:14:41.758 -08 000000058 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:14:41.758 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:14:41.758 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:14:41.759 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:41.759 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:41.760 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:41.760 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:41.763 -08 000000058 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:14:41.815 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:41.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-02-28 20:14:41.816 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:14:41.816 -08 000000101 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:41.816 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:41.879 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:14:41.879 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:41.909 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:41.909 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:41.910 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:41.910 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:41.915 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V800IP9600R\r
17-02-28 20:14:41.941 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:14:41.941 -08 000000101 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:41.941 -08 000000101 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:14:41.941 -08 000000101 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:14:42.002 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:42.003 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:14:42.003 -08 000000101 INF: Y Motor: Start the move command
17-02-28 20:14:42.003 -08 000000101 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:42.059 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:42.059 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:42.060 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:42.060 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:42.065 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:14:42.065 -08 000000101 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:14:42.065 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:42.102 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:42.190 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:42.191 -08 000000101 INF: Y Motor: Unshifted Position: 5929034
17-02-28 20:14:42.209 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:42.209 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:42.210 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:42.210 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:42.241 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:42.359 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:14:42.359 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:14:42.359 -08 000000057 INF: ===================Camera #0 Frame #1===================
17-02-28 20:14:42.360 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:14:42.360 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:14:42.360 -08 000000050 INF: ===================Camera #2 Frame #1===================
17-02-28 20:14:42.365 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:42.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:42.500 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:42.502 -08 000000101 INF: Y Motor: Unshifted Position: 5882029
17-02-28 20:14:42.512 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:14:42.512 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:14:42.512 -08 000000057 INF: ===================Camera #0 Frame #3===================
17-02-28 20:14:42.513 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:14:42.513 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:14:42.513 -08 000000050 INF: ===================Camera #2 Frame #3===================
17-02-28 20:14:42.552 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:42.668 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:42.668 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:14:42.668 -08 000000057 INF: ===================Camera #0 Frame #4===================
17-02-28 20:14:42.673 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:42.673 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:14:42.673 -08 000000050 INF: ===================Camera #2 Frame #4===================
17-02-28 20:14:42.678 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:42.750 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:42.814 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:42.815 -08 000000101 INF: Y Motor: Unshifted Position: 5835226
17-02-28 20:14:42.821 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:42.821 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:42.821 -08 000000057 INF: ===================Camera #0 Frame #5===================
17-02-28 20:14:42.827 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:42.827 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:42.827 -08 000000050 INF: ===================Camera #2 Frame #5===================
17-02-28 20:14:42.865 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:42.875 -08 000000102 INF: FPGA: Recv ZWAIT 
17-02-28 20:14:42.875 -08 000000102 INF: FPGA: Recv TDIYWAIT
17-02-28 20:14:42.875 -08 000000047 INF: ===================Serial===================
17-02-28 20:14:42.876 -08 000000058 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:42.877 -08 000000047 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:14:42.877 -08 000000058 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:14:42.877 -08 000000047 INF: ===================Serial===================
17-02-28 20:14:42.878 -08 000000069 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:14:42.878 -08 000000037 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:14:42.878 -08 000000069 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:14:42.878 -08 000000069 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:14:42.878 -08 000000069 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:14:42.878 -08 000000069 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:14:42.878 -08 000000037 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:14:42.878 -08 000000037 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:14:42.878 -08 000000037 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:14:42.879 -08 000000047 INF: ======================================
17-02-28 20:14:42.881 -08 000000037 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:14:42.974 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:14:42.974 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:14:42.974 -08 000000057 INF: ===================Camera #0 Frame #6===================
17-02-28 20:14:42.977 -08 000000057 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:14:42.978 -08 000000057 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:42.993 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:43.003 -08 000000057 INF: Camera #0 ReleaseBuffer
17-02-28 20:14:43.003 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:14:43.004 -08 000000057 INF: ======================================
17-02-28 20:14:43.004 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:14:43.004 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:14:43.005 -08 000000050 INF: ===================Camera #2 Frame #6===================
17-02-28 20:14:43.008 -08 000000050 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:14:43.009 -08 000000050 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:43.034 -08 000000050 INF: Camera #2 ReleaseBuffer
17-02-28 20:14:43.034 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:14:43.035 -08 000000050 INF: ======================================
17-02-28 20:14:43.037 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:14:43.038 -08 000000010 INF: ======================================
17-02-28 20:14:43.064 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:43.124 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:43.125 -08 000000101 INF: Y Motor: Unshifted Position: 5790759
17-02-28 20:14:43.175 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:43.249 -08 000000095 INF: FPGA: Recv EX1MV
17-02-28 20:14:43.249 -08 000000095 INF: FPGA: Recv EX2MV
17-02-28 20:14:43.249 -08 000000037 INF: Excitation Filter 2: Moved 107 steps in 370.4289 ms
17-02-28 20:14:43.249 -08 000000069 INF: Excitation Filter 1: Moved 107 steps in 370.6312 ms
17-02-28 20:14:43.249 -08 000000069 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.7581 ms
17-02-28 20:14:43.249 -08 000000069 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.8312 ms
17-02-28 20:14:43.249 -08 000000037 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.5438 ms
17-02-28 20:14:43.249 -08 000000037 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.9425 ms
17-02-28 20:14:43.250 -08 000000069 INF: ======================================
17-02-28 20:14:43.250 -08 000000037 INF: ======================================
17-02-28 20:14:43.251 -08 000000058 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:43.252 -08 000000058 INF: ======================================
17-02-28 20:14:43.313 -08 000000101 INF: Y Motor: Unshifted Position: 5790744
17-02-28 20:14:43.313 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:43.313 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:43.374 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:43.376 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:14:43.376 -08 000000101 INF: Y Motor: Moved to 62.9074 after 1311 ms
17-02-28 20:14:43.376 -08 000000101 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:43.439 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:43.440 -08 000000101 INF: Y Motor: Recv v 4097\r
17-02-28 20:14:43.440 -08 000000101 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:43.440 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:43.501 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:14:43.501 -08 000000101 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:43.501 -08 000000101 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:43.564 -08 000000101 INF: Y Motor: Recv v 134217728\r
17-02-28 20:14:43.564 -08 000000101 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:14:43.564 -08 000000101 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:43.564 -08 000000101 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:43.626 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:14:43.626 -08 000000101 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:43.626 -08 000000101 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:43.626 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:43.687 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:14:43.687 -08 000000101 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:43.687 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:43.689 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:43.748 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:43.751 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:14:43.751 -08 000000101 INF: ======================================
17-02-28 20:14:43.752 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:43.753 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:43.754 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:43.754 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:14:43.813 -08 000000086 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:14:43.814 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:43.873 -08 000000053 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:14:43.873 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:14:43.936 -08 000000057 INF: FPGA: Recv ZADCR 2426
17-02-28 20:14:43.936 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:14:43.936 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:14:43.998 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:43.998 -08 000000100 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:14:43.998 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:14:43.998 -08 000000018 INF: TDIScan finished after 6917.6169 ms
17-02-28 20:14:43.998 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:14:43.998 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:14:43.999 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:14:44.060 -08 000000087 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:14:44.061 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:44.061 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.061 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.062 -08 000000104 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:14:44.062 -08 000000030 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:14:44.062 -08 000000095 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:14:44.063 -08 000000104 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:44.063 -08 000000104 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:44.063 -08 000000030 INF: ======================================
17-02-28 20:14:44.063 -08 000000095 INF: ======================================
17-02-28 20:14:44.125 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:14:44.125 -08 000000104 INF: ======================================
17-02-28 20:14:44.126 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.127 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.128 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:14:44.178 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.179 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:14:44.221 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.221 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:14:44.263 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.263 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:14:44.297 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.297 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:44.297 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:44.298 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:14:44.306 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:44.306 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:14:44.306 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:14:44.311 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:44.373 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:44.623 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:44.685 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:44.935 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:44.935 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:14:44.958 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0577720601282669Best Z position at top surface = -0.128189561205607Best Z position at top surface + compensator offset = -0.105489561205607 C:3,L:5,T
17-02-28 20:14:44.960 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.128189561205607
17-02-28 20:14:44.960 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.76079
17-02-28 20:14:44.960 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0577720601282669
17-02-28 20:14:44.960 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.42165
17-02-28 20:14:44.960 -08 000000018 INF: Z-height at LaneTopSurface is -0.128189561205607.
17-02-28 20:14:44.960 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:44.997 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:45.092 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:14:45.093 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:14:45.119 -08 000000044 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:45.119 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:45.121 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.121 -08 000000018 INF: Lane 5, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:14:45.121 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.122 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.122 -08 000000057 INF: ===================Move Tilt Motor 1===================
17-02-28 20:14:45.122 -08 000000034 INF: ===================Move Tilt Motor 2===================
17-02-28 20:14:45.123 -08 000000109 INF: ===================Move Tilt Motor 3===================
17-02-28 20:14:45.123 -08 000000034 INF: ======================================
17-02-28 20:14:45.123 -08 000000109 INF: ======================================
17-02-28 20:14:45.124 -08 000000057 INF: ======================================
17-02-28 20:14:45.125 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.125 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.126 -08 000000018 INF: ETF Best Z: -0.1054896 mm (27653 DAC)
17-02-28 20:14:45.126 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.127 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.127 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:14:45.127 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:14:45.559 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:45.559 -08 000000064 INF: FPGA: Recv MIOCOMPF
17-02-28 20:14:45.559 -08 000000018 INF: Compensator: Moved IntoPath in 432 ms
17-02-28 20:14:45.560 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.561 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.567 -08 000000018 INF: Swath 1 position calculated to be: {X=16.64493, Y=39.70011} from estimated center X= 17.122, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:14:45.567 -08 000000018 INF: Swath 2 position calculated to be: {X=17.75293, Y=39.70011} from estimated center X= 17.122, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:14:45.573 -08 000000018 INF: Swath 0: Converted transform from (49.71588, -28.0713) pixels to (0.01725, -0.00966) mm.
17-02-28 20:14:45.578 -08 000000018 INF: Swath 1: Converted transform from (30.42066, -23.31389) pixels to (0.01035, -0.007935) mm.
17-02-28 20:14:45.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011===================
17-02-28 20:14:45.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011===================
17-02-28 20:14:45.579 -08 000000018 INF: Transformed XStagePosition from 16.64493 mm to 16.6621798854321 mm.
17-02-28 20:14:45.591 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4804563330263 mm.
17-02-28 20:14:45.591 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2804563330263 mm.
17-02-28 20:14:45.591 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3712063330263 mm.
17-02-28 20:14:45.593 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:45.593 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:14:45.593 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:45.593 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = E_1
17-02-28 20:14:45.602 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:45.602 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:45.603 -08 000000087 INF: ===================MoveEmissionFilters===================
17-02-28 20:14:45.603 -08 000000051 INF: ===================Move X,Y===================
17-02-28 20:14:45.603 -08 000000044 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:45.604 -08 000000098 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:45.604 -08 000000044 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:14:45.604 -08 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:45.604 -08 000000109 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:45.604 -08 000000051 INF: ===================Move X,Y, Parallel===================
17-02-28 20:14:45.604 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:45.605 -08 000000098 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:45.605 -08 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:45.605 -08 000000109 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:45.605 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:45.605 -08 000000106 INF: ===================Move X Motor without settling===================
17-02-28 20:14:45.605 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:45.605 -08 000000106 INF: X Motor: Xmit PR VM\n
17-02-28 20:14:45.605 -08 000000058 INF: Y Motor: Moving to 64.4805 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:14:45.605 -08 000000050 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:14:45.605 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:45.606 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:45.606 -08 000000029 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:14:45.606 -08 000000076 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:14:45.606 -08 000000062 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:14:45.606 -08 000000055 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:14:45.606 -08 000000108 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:14:45.606 -08 000000066 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:14:45.606 -08 000000050 INF: ======================================
17-02-28 20:14:45.606 -08 000000069 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:14:45.606 -08 000000055 INF: ======================================
17-02-28 20:14:45.606 -08 000000108 INF: ======================================
17-02-28 20:14:45.607 -08 000000069 INF: ======================================
17-02-28 20:14:45.607 -08 000000029 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:14:45.607 -08 000000044 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:14:45.607 -08 000000044 INF: Z Motor: Moving to -0.1255 mm, started at -0.0100 mm
17-02-28 20:14:45.607 -08 000000044 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:14:45.607 -08 000000062 INF: ======================================
17-02-28 20:14:45.607 -08 000000066 INF: ======================================
17-02-28 20:14:45.608 -08 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:45.608 -08 000000029 INF: ======================================
17-02-28 20:14:45.609 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:45.609 -08 000000076 INF: ======================================
17-02-28 20:14:45.609 -08 000000034 INF: ======================================
17-02-28 20:14:45.609 -08 000000098 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:45.610 -08 000000057 INF: ======================================
17-02-28 20:14:45.610 -08 000000109 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:45.610 -08 000000098 INF: ======================================
17-02-28 20:14:45.611 -08 000000109 INF: ======================================
17-02-28 20:14:45.612 -08 000000087 INF: ======================================
17-02-28 20:14:45.621 -08 000000045 INF: FPGA: Recv ZTRG 
17-02-28 20:14:45.621 -08 000000044 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:14:45.622 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:45.683 -08 000000029 INF: FPGA: Recv ZYT 
17-02-28 20:14:45.683 -08 000000044 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:14:45.683 -08 000000044 INF: FPGA: Xmit ZMV 32896\n
17-02-28 20:14:45.685 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:14:45.685 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:45.685 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:45.685 -08 000000106 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:14:45.685 -08 000000106 INF: X Motor: Xmit PR VI\n
17-02-28 20:14:45.747 -08 000000086 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:14:45.747 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:14:45.749 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:14:45.749 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:45.750 -08 000000106 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:14:45.750 -08 000000106 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:14:45.750 -08 000000106 INF: X Motor: Moving to 16.6622 mm @15.000 mm/sec, started at 17.1982 mm
17-02-28 20:14:45.750 -08 000000106 INF: X Motor: Xmit MA -17342\n
17-02-28 20:14:45.809 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:14:45.809 -08 000000106 INF: X Motor: Recv MA -17342\r\n>
17-02-28 20:14:45.809 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:45.809 -08 000000058 INF: Y Motor: Set target position to 5948046 encoder counts
17-02-28 20:14:45.809 -08 000000058 INF: Y Motor: Xmit s r0xca 5948046\r
17-02-28 20:14:45.809 -08 000000106 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:14:45.869 -08 000000095 INF: FPGA: Recv ZMV 
17-02-28 20:14:45.869 -08 000000044 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.964 ms
17-02-28 20:14:45.869 -08 000000044 INF: FPGA: Xmit ZDACR\n
17-02-28 20:14:45.871 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:14:45.871 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:14:45.871 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:45.872 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:45.933 -08 000000108 INF: FPGA: Recv ZDACR 32896
17-02-28 20:14:45.933 -08 000000044 INF: Z Motor: MoveAndTrigger took 326.235 ms w/comms
17-02-28 20:14:45.933 -08 000000044 INF: Z Motor: After move to -0.1255, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:14:45.933 -08 000000044 INF: Z Motor: MoveAbsStepped took 326.403 ms
17-02-28 20:14:45.934 -08 000000044 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:45.935 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:14:45.935 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:45.935 -08 000000058 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:14:45.935 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:45.935 -08 000000044 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:14:45.936 -08 000000081 INF: ===================Camera Arm TDI===================
17-02-28 20:14:45.936 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:14:45.937 -08 000000081 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:45.937 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:45.937 -08 000000081 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:45.938 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:45.938 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:45.938 -08 000000087 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:14:45.995 -08 000000100 INF: FPGA: Recv ZSEL 
17-02-28 20:14:45.996 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:45.996 -08 000000087 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:14:46.057 -08 000000090 INF: FPGA: Recv TDIBB
17-02-28 20:14:46.057 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:46.058 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:46.059 -08 000000058 INF: Y Motor: Unshifted Position: 5874681
17-02-28 20:14:46.059 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:46.060 -08 000000087 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:14:46.061 -08 000000087 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:14:46.061 -08 000000087 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:14:46.109 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:46.120 -08 000000095 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:46.120 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:46.122 -08 000000087 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:14:46.122 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:46.124 -08 000000087 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:14:46.124 -08 000000087 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:14:46.124 -08 000000087 INF: Z Motor: Arming to move to -0.0855 mm
17-02-28 20:14:46.124 -08 000000087 INF: FPGA: Xmit ZYT 6428046 4\n
17-02-28 20:14:46.182 -08 000000109 INF: FPGA: Recv ZYT 
17-02-28 20:14:46.182 -08 000000087 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6374681 enc / 63.747 mm / ) = 6428046 enc / 64.280 mm
17-02-28 20:14:46.182 -08 000000087 INF: FPGA: Xmit ZARM 22410\n
17-02-28 20:14:46.185 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:46.237 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:46.245 -08 000000062 INF: FPGA: Recv ZARM
17-02-28 20:14:46.245 -08 000000087 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.7625 ms
17-02-28 20:14:46.245 -08 000000087 INF: Z Motor: ArmAbsStepped took 119.6451 ms
17-02-28 20:14:46.245 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:46.246 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:46.246 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:14:46.247 -08 000000106 INF: X Motor: Xmit PR ER\n
17-02-28 20:14:46.248 -08 000000087 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:14:46.248 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:14:46.250 -08 000000087 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:14:46.250 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:14:46.251 -08 000000087 INF: ======================================
17-02-28 20:14:46.310 -08 000000106 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:14:46.310 -08 000000106 INF: X Motor: Moved to 16.6611 after 500 ms
17-02-28 20:14:46.310 -08 000000106 INF: ======================================
17-02-28 20:14:46.371 -08 000000058 INF: Y Motor: Unshifted Position: 5948048
17-02-28 20:14:46.371 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:46.371 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:46.433 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:14:46.433 -08 000000058 INF: Y Motor: Moved to 64.4805 after 497 ms
17-02-28 20:14:46.433 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:46.495 -08 000000058 INF: Y Motor: Recv v 4096\r
17-02-28 20:14:46.495 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:46.495 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:46.496 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:46.558 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:46.559 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:14:46.559 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:46.559 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:46.622 -08 000000058 INF: Y Motor: Recv v 402653184\r
17-02-28 20:14:46.622 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:14:46.622 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:46.622 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:46.682 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:14:46.682 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:46.682 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:46.682 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:46.747 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:14:46.747 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:46.747 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:46.808 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:14:46.808 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:46.808 -08 000000058 INF: ======================================
17-02-28 20:14:46.809 -08 000000051 INF: ===================Move X,Y===================
17-02-28 20:14:46.810 -08 000000051 INF: ======================================
17-02-28 20:14:46.869 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:46.906 -08 000000081 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:46.906 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:46.906 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:46.922 -08 000000081 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:46.924 -08 000000081 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:47.119 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:47.182 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:47.432 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:47.495 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:47.745 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:47.806 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:47.990 -08 000000081 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:47.990 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:47.990 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:48.005 -08 000000081 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:48.007 -08 000000081 INF: ===================Camera Arm TDI===================
17-02-28 20:14:48.008 -08 000000081 INF: ======================================
17-02-28 20:14:48.009 -08 000000044 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:48.010 -08 000000044 INF: ======================================
17-02-28 20:14:48.011 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:48.012 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:48.012 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:14:48.012 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:14:48.055 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:48.055 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:14:48.056 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:48.117 -08 000000010 INF: FPGA: Recv ZFREQCL
17-02-28 20:14:48.117 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:14:48.117 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:48.117 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:48.118 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:48.179 -08 000000069 INF: FPGA: Recv TDIYERD 6448047
17-02-28 20:14:48.179 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448047 counts (64.480 mm)
17-02-28 20:14:48.179 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:48.180 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:48.180 -08 000000052 INF: ===================TDI FPGA Arm===================
17-02-28 20:14:48.180 -08 000000108 INF: ===================Set YMotor gains for scans===================
17-02-28 20:14:48.181 -08 000000108 INF: ======================================
17-02-28 20:14:48.181 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:48.182 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:14:48.182 -08 000000052 INF: FPGA: Xmit TDIYPOS 6337121\n
17-02-28 20:14:48.241 -08 000000010 INF: FPGA: Recv TDIYPOS
17-02-28 20:14:48.241 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:48.243 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:14:48.243 -08 000000052 INF: FPGA: Xmit TDIYARM3 139264 6428046 1 1\n
17-02-28 20:14:48.305 -08 000000029 INF: FPGA: Recv TDIYARM3
17-02-28 20:14:48.305 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:48.306 -08 000000052 INF: ===================TDI FPGA Arm===================
17-02-28 20:14:48.307 -08 000000052 INF: ======================================
17-02-28 20:14:48.308 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:48.309 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:48.309 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:48.310 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:48.310 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:48.311 -08 000000062 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:14:48.311 -08 000000034 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:14:48.311 -08 000000062 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:14:48.311 -08 000000062 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:14:48.311 -08 000000062 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:14:48.311 -08 000000034 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:14:48.311 -08 000000062 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:14:48.311 -08 000000034 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:14:48.311 -08 000000034 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:14:48.312 -08 000000034 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:14:48.368 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:48.430 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:48.677 -08 000000100 INF: FPGA: Recv EX2MV
17-02-28 20:14:48.677 -08 000000100 INF: FPGA: Recv EX1MV
17-02-28 20:14:48.677 -08 000000034 INF: Excitation Filter 1: Moved -107 steps in 365.4837 ms
17-02-28 20:14:48.677 -08 000000034 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.6156 ms
17-02-28 20:14:48.677 -08 000000034 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.6841 ms
17-02-28 20:14:48.677 -08 000000062 INF: Excitation Filter 2: Moved -107 steps in 365.6791 ms
17-02-28 20:14:48.677 -08 000000062 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.8707 ms
17-02-28 20:14:48.677 -08 000000062 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.9628 ms
17-02-28 20:14:48.677 -08 000000034 INF: ======================================
17-02-28 20:14:48.677 -08 000000062 INF: ======================================
17-02-28 20:14:48.678 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:48.679 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:48.680 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:48.680 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:14:48.680 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:48.680 -08 000000064 INF: ===================FPGA Z Wait===================
17-02-28 20:14:48.680 -08 000000098 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:48.681 -08 000000098 INF: Y Motor: Moving to 14.8321 mm @6.500 mm/sec, started at 64.4805 mm
17-02-28 20:14:48.681 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:14:48.681 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:48.681 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:48.681 -08 000000106 INF: ===================Camera TDI, Parallel===================
17-02-28 20:14:48.681 -08 000000032 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:14:48.682 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:48.682 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:14:48.682 -08 000000032 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:14:48.684 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:48.684 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:48.686 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:48.686 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:48.742 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:48.743 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:14:48.743 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:48.743 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:48.805 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:14:48.805 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:48.834 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:48.834 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:48.836 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:48.836 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:48.866 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:14:48.866 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:48.866 -08 000000098 INF: Y Motor: Set target position to 983212 encoder counts
17-02-28 20:14:48.866 -08 000000098 INF: Y Motor: Xmit s r0xca 983212\r
17-02-28 20:14:48.931 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:14:48.931 -08 000000098 INF: Y Motor: Start the move command
17-02-28 20:14:48.931 -08 000000098 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:48.984 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:48.984 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:48.986 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:48.986 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:48.992 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:14:48.992 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:48.992 -08 000000098 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:14:48.992 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.052 -08 000000010 INF: FPGA: Recv ZWAIT 
17-02-28 20:14:49.052 -08 000000064 INF: ======================================
17-02-28 20:14:49.053 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:49.116 -08 000000098 INF: Y Motor: Unshifted Position: 5886621
17-02-28 20:14:49.134 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:49.134 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:14:49.134 -08 000000081 INF: ===================Camera #0 Frame #4===================
17-02-28 20:14:49.136 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:49.136 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:49.136 -08 000000066 INF: ===================Camera #2 Frame #5===================
17-02-28 20:14:49.166 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.294 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.298 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:14:49.298 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:14:49.298 -08 000000081 INF: ===================Camera #0 Frame #10===================
17-02-28 20:14:49.303 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:49.303 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:14:49.303 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:14:49.303 -08 000000066 INF: ===================Camera #2 Frame #11===================
17-02-28 20:14:49.366 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:49.430 -08 000000098 INF: Y Motor: Unshifted Position: 5682958
17-02-28 20:14:49.468 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:14:49.468 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:14:49.468 -08 000000081 INF: ===================Camera #0 Frame #17===================
17-02-28 20:14:49.474 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:14:49.474 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:14:49.474 -08 000000066 INF: ===================Camera #2 Frame #17===================
17-02-28 20:14:49.480 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.604 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.616 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:49.642 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:14:49.642 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:14:49.642 -08 000000081 INF: ===================Camera #0 Frame #23===================
17-02-28 20:14:49.645 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:14:49.645 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:14:49.645 -08 000000066 INF: ===================Camera #2 Frame #23===================
17-02-28 20:14:49.676 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:49.741 -08 000000098 INF: Y Motor: Unshifted Position: 5481460
17-02-28 20:14:49.791 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.812 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:14:49.812 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:14:49.812 -08 000000081 INF: ===================Camera #0 Frame #29===================
17-02-28 20:14:49.816 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:14:49.816 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:14:49.816 -08 000000066 INF: ===================Camera #2 Frame #30===================
17-02-28 20:14:49.917 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.926 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:49.982 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:14:49.982 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:14:49.982 -08 000000081 INF: ===================Camera #0 Frame #36===================
17-02-28 20:14:49.990 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:49.990 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:14:49.990 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:14:49.990 -08 000000066 INF: ===================Camera #2 Frame #36===================
17-02-28 20:14:50.053 -08 000000098 INF: Y Motor: Unshifted Position: 5277360
17-02-28 20:14:50.103 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:50.156 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:14:50.156 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:14:50.156 -08 000000081 INF: ===================Camera #0 Frame #42===================
17-02-28 20:14:50.161 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:14:50.161 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:14:50.161 -08 000000066 INF: ===================Camera #2 Frame #42===================
17-02-28 20:14:50.227 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:50.240 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:50.302 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:50.326 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:14:50.326 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:14:50.326 -08 000000081 INF: ===================Camera #0 Frame #48===================
17-02-28 20:14:50.332 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:14:50.332 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:14:50.332 -08 000000066 INF: ===================Camera #2 Frame #49===================
17-02-28 20:14:50.365 -08 000000098 INF: Y Motor: Unshifted Position: 5074344
17-02-28 20:14:50.415 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:50.496 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:14:50.496 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:14:50.496 -08 000000081 INF: ===================Camera #0 Frame #55===================
17-02-28 20:14:50.506 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:14:50.506 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:14:50.506 -08 000000066 INF: ===================Camera #2 Frame #55===================
17-02-28 20:14:50.541 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:50.552 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:50.614 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:50.670 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:14:50.670 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:14:50.670 -08 000000081 INF: ===================Camera #0 Frame #61===================
17-02-28 20:14:50.677 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:14:50.677 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:14:50.677 -08 000000066 INF: ===================Camera #2 Frame #61===================
17-02-28 20:14:50.678 -08 000000098 INF: Y Motor: Unshifted Position: 4871546
17-02-28 20:14:50.728 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:50.840 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:14:50.840 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:14:50.840 -08 000000081 INF: ===================Camera #0 Frame #67===================
17-02-28 20:14:50.848 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:14:50.848 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:14:50.848 -08 000000066 INF: ===================Camera #2 Frame #68===================
17-02-28 20:14:50.852 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:50.864 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:50.925 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:50.990 -08 000000098 INF: Y Motor: Unshifted Position: 4669828
17-02-28 20:14:51.010 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:14:51.010 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:14:51.010 -08 000000081 INF: ===================Camera #0 Frame #74===================
17-02-28 20:14:51.022 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:14:51.022 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:14:51.022 -08 000000066 INF: ===================Camera #2 Frame #74===================
17-02-28 20:14:51.040 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:51.165 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:51.175 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:51.184 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:14:51.184 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:14:51.184 -08 000000081 INF: ===================Camera #0 Frame #80===================
17-02-28 20:14:51.193 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:14:51.194 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:14:51.194 -08 000000066 INF: ===================Camera #2 Frame #80===================
17-02-28 20:14:51.238 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:51.300 -08 000000098 INF: Y Motor: Unshifted Position: 4465066
17-02-28 20:14:51.350 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:51.354 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:14:51.354 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:14:51.354 -08 000000081 INF: ===================Camera #0 Frame #86===================
17-02-28 20:14:51.365 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:14:51.365 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:14:51.365 -08 000000066 INF: ===================Camera #2 Frame #87===================
17-02-28 20:14:51.476 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:51.488 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:51.524 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:14:51.524 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:14:51.524 -08 000000081 INF: ===================Camera #0 Frame #92===================
17-02-28 20:14:51.539 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:14:51.539 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:14:51.539 -08 000000066 INF: ===================Camera #2 Frame #93===================
17-02-28 20:14:51.550 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:51.614 -08 000000098 INF: Y Motor: Unshifted Position: 4262707
17-02-28 20:14:51.664 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:51.694 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:14:51.694 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:14:51.694 -08 000000081 INF: ===================Camera #0 Frame #99===================
17-02-28 20:14:51.710 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:14:51.710 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:14:51.710 -08 000000066 INF: ===================Camera #2 Frame #99===================
17-02-28 20:14:51.789 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:51.800 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:51.861 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:51.867 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:14:51.867 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:14:51.867 -08 000000081 INF: ===================Camera #0 Frame #105===================
17-02-28 20:14:51.881 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:14:51.881 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:14:51.881 -08 000000066 INF: ===================Camera #2 Frame #106===================
17-02-28 20:14:51.926 -08 000000098 INF: Y Motor: Unshifted Position: 4060328
17-02-28 20:14:51.976 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.037 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:14:52.037 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:14:52.037 -08 000000081 INF: ===================Camera #0 Frame #111===================
17-02-28 20:14:52.055 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:14:52.055 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:14:52.055 -08 000000066 INF: ===================Camera #2 Frame #112===================
17-02-28 20:14:52.101 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.111 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:52.174 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:52.207 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:14:52.207 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:14:52.207 -08 000000081 INF: ===================Camera #0 Frame #118===================
17-02-28 20:14:52.226 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:14:52.226 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:14:52.226 -08 000000066 INF: ===================Camera #2 Frame #118===================
17-02-28 20:14:52.237 -08 000000098 INF: Y Motor: Unshifted Position: 3856881
17-02-28 20:14:52.287 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.380 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:14:52.380 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:14:52.380 -08 000000081 INF: ===================Camera #0 Frame #124===================
17-02-28 20:14:52.397 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:14:52.397 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:14:52.397 -08 000000066 INF: ===================Camera #2 Frame #125===================
17-02-28 20:14:52.411 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.424 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:52.488 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:52.549 -08 000000098 INF: Y Motor: Unshifted Position: 3653426
17-02-28 20:14:52.550 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:14:52.550 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:14:52.550 -08 000000081 INF: ===================Camera #0 Frame #130===================
17-02-28 20:14:52.571 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:14:52.571 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:14:52.571 -08 000000066 INF: ===================Camera #2 Frame #131===================
17-02-28 20:14:52.599 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.720 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:14:52.720 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:14:52.720 -08 000000081 INF: ===================Camera #0 Frame #136===================
17-02-28 20:14:52.723 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.738 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:52.742 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:14:52.742 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:14:52.742 -08 000000066 INF: ===================Camera #2 Frame #137===================
17-02-28 20:14:52.796 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:52.862 -08 000000098 INF: Y Motor: Unshifted Position: 3452364
17-02-28 20:14:52.890 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:14:52.890 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:14:52.890 -08 000000081 INF: ===================Camera #0 Frame #143===================
17-02-28 20:14:52.912 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.913 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:14:52.913 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:14:52.913 -08 000000066 INF: ===================Camera #2 Frame #144===================
17-02-28 20:14:53.038 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.046 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:53.063 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:14:53.063 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:14:53.063 -08 000000081 INF: ===================Camera #0 Frame #149===================
17-02-28 20:14:53.087 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:14:53.087 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:14:53.087 -08 000000066 INF: ===================Camera #2 Frame #150===================
17-02-28 20:14:53.110 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:53.174 -08 000000098 INF: Y Motor: Unshifted Position: 3248264
17-02-28 20:14:53.224 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.233 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:14:53.233 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:14:53.233 -08 000000081 INF: ===================Camera #0 Frame #155===================
17-02-28 20:14:53.258 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:14:53.258 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:14:53.258 -08 000000066 INF: ===================Camera #2 Frame #156===================
17-02-28 20:14:53.346 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.360 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:53.403 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:14:53.403 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:14:53.403 -08 000000081 INF: ===================Camera #0 Frame #162===================
17-02-28 20:14:53.422 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:53.429 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:14:53.429 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:14:53.429 -08 000000066 INF: ===================Camera #2 Frame #163===================
17-02-28 20:14:53.485 -08 000000098 INF: Y Motor: Unshifted Position: 3045257
17-02-28 20:14:53.535 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.576 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:14:53.576 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:14:53.576 -08 000000081 INF: ===================Camera #0 Frame #168===================
17-02-28 20:14:53.603 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:14:53.603 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:14:53.603 -08 000000066 INF: ===================Camera #2 Frame #169===================
17-02-28 20:14:53.658 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.672 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:53.732 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:53.746 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:14:53.746 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:14:53.746 -08 000000081 INF: ===================Camera #0 Frame #174===================
17-02-28 20:14:53.774 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:14:53.774 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:14:53.774 -08 000000066 INF: ===================Camera #2 Frame #175===================
17-02-28 20:14:53.797 -08 000000098 INF: Y Motor: Unshifted Position: 2843758
17-02-28 20:14:53.847 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.916 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:14:53.916 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:14:53.916 -08 000000081 INF: ===================Camera #0 Frame #181===================
17-02-28 20:14:53.945 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:14:53.945 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:14:53.945 -08 000000066 INF: ===================Camera #2 Frame #182===================
17-02-28 20:14:53.971 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.982 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:54.044 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:54.089 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:14:54.089 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:14:54.089 -08 000000081 INF: ===================Camera #0 Frame #187===================
17-02-28 20:14:54.111 -08 000000098 INF: Y Motor: Unshifted Position: 2640740
17-02-28 20:14:54.119 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:14:54.119 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:14:54.119 -08 000000066 INF: ===================Camera #2 Frame #188===================
17-02-28 20:14:54.161 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:54.259 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:14:54.259 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:14:54.259 -08 000000081 INF: ===================Camera #0 Frame #193===================
17-02-28 20:14:54.284 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:54.290 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:14:54.290 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:14:54.290 -08 000000066 INF: ===================Camera #2 Frame #194===================
17-02-28 20:14:54.294 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:54.358 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:54.422 -08 000000098 INF: Y Motor: Unshifted Position: 2436651
17-02-28 20:14:54.429 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:14:54.429 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:14:54.429 -08 000000081 INF: ===================Camera #0 Frame #199===================
17-02-28 20:14:54.461 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:14:54.461 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:14:54.461 -08 000000066 INF: ===================Camera #2 Frame #201===================
17-02-28 20:14:54.472 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:54.596 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:54.599 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:14:54.599 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:14:54.599 -08 000000081 INF: ===================Camera #0 Frame #206===================
17-02-28 20:14:54.608 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:54.635 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:14:54.635 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:14:54.635 -08 000000066 INF: ===================Camera #2 Frame #207===================
17-02-28 20:14:54.669 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:54.734 -08 000000098 INF: Y Motor: Unshifted Position: 2234928
17-02-28 20:14:54.772 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:14:54.772 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:14:54.772 -08 000000081 INF: ===================Camera #0 Frame #212===================
17-02-28 20:14:54.784 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:54.806 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:14:54.806 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:14:54.806 -08 000000066 INF: ===================Camera #2 Frame #213===================
17-02-28 20:14:54.906 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:54.919 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:54.942 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:14:54.942 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:14:54.942 -08 000000081 INF: ===================Camera #0 Frame #218===================
17-02-28 20:14:54.977 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:14:54.977 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:14:54.977 -08 000000066 INF: ===================Camera #2 Frame #220===================
17-02-28 20:14:54.980 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:55.046 -08 000000098 INF: Y Motor: Unshifted Position: 2031911
17-02-28 20:14:55.096 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:55.112 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:14:55.112 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:14:55.112 -08 000000081 INF: ===================Camera #0 Frame #225===================
17-02-28 20:14:55.151 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:14:55.151 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:14:55.151 -08 000000066 INF: ===================Camera #2 Frame #226===================
17-02-28 20:14:55.220 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:55.230 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:55.286 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:14:55.286 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:14:55.286 -08 000000081 INF: ===================Camera #0 Frame #231===================
17-02-28 20:14:55.292 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:55.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:55.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:55.293 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:14:55.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left===================
17-02-28 20:14:55.322 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:14:55.322 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:14:55.322 -08 000000066 INF: ===================Camera #2 Frame #232===================
17-02-28 20:14:55.358 -08 000000098 INF: Y Motor: Unshifted Position: 1829106
17-02-28 20:14:55.408 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:55.456 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:14:55.456 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:14:55.456 -08 000000081 INF: ===================Camera #0 Frame #237===================
17-02-28 20:14:55.493 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:14:55.493 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:14:55.493 -08 000000066 INF: ===================Camera #2 Frame #239===================
17-02-28 20:14:55.532 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:55.626 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:14:55.626 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:14:55.626 -08 000000081 INF: ===================Camera #0 Frame #243===================
17-02-28 20:14:55.667 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:14:55.667 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:14:55.667 -08 000000066 INF: ===================Camera #2 Frame #245===================
17-02-28 20:14:55.668 -08 000000098 INF: Y Motor: Unshifted Position: 1625442
17-02-28 20:14:55.718 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:55.796 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:14:55.796 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:14:55.796 -08 000000081 INF: ===================Camera #0 Frame #250===================
17-02-28 20:14:55.838 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:14:55.838 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:14:55.838 -08 000000066 INF: ===================Camera #2 Frame #251===================
17-02-28 20:14:55.842 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:55.970 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:14:55.970 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:14:55.970 -08 000000081 INF: ===================Camera #0 Frame #256===================
17-02-28 20:14:55.982 -08 000000098 INF: Y Motor: Unshifted Position: 1423288
17-02-28 20:14:56.009 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:14:56.009 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:14:56.009 -08 000000066 INF: ===================Camera #2 Frame #258===================
17-02-28 20:14:56.032 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:56.140 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:14:56.140 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:14:56.140 -08 000000081 INF: ===================Camera #0 Frame #262===================
17-02-28 20:14:56.156 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:56.183 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:14:56.183 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:14:56.183 -08 000000066 INF: ===================Camera #2 Frame #264===================
17-02-28 20:14:56.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:56.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 4 of 5 seconds left===================
17-02-28 20:14:56.295 -08 000000098 INF: Y Motor: Unshifted Position: 1219613
17-02-28 20:14:56.311 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:14:56.311 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:14:56.311 -08 000000081 INF: ===================Camera #0 Frame #269===================
17-02-28 20:14:56.345 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:56.355 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:14:56.355 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:14:56.355 -08 000000066 INF: ===================Camera #2 Frame #270===================
17-02-28 20:14:56.403 -08 000000050 INF: RunCopyService queue size at 2/28/2017 8:14:56 PM is 2
17-02-28 20:14:56.415 -08 000000055 INF: FPGA: Recv TDIYWAIT
17-02-28 20:14:56.415 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:56.417 -08 000000032 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:14:56.417 -08 000000062 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:14:56.418 -08 000000095 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:14:56.418 -08 000000062 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:14:56.418 -08 000000062 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:14:56.418 -08 000000062 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:14:56.418 -08 000000062 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:14:56.418 -08 000000095 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:14:56.418 -08 000000095 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:14:56.418 -08 000000095 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:14:56.419 -08 000000095 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:14:56.467 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:56.483 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:56.483 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:56.483 -08 000000081 INF: ===================Camera #0 Frame #272===================
17-02-28 20:14:56.493 -08 000000081 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:56.494 -08 000000081 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:56.607 -08 000000098 INF: Y Motor: Unshifted Position: 1015518
17-02-28 20:14:56.657 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:56.662 -08 000000081 INF: Camera #0 ReleaseBuffer
17-02-28 20:14:56.662 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:56.662 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:56.662 -08 000000066 INF: ===================Camera #2 Frame #272===================
17-02-28 20:14:56.662 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:56.669 -08 000000066 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:56.670 -08 000000066 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:56.696 -08 000000081 INF: ======================================
17-02-28 20:14:56.793 -08 000000044 INF: FPGA: Recv EX1MV
17-02-28 20:14:56.793 -08 000000044 INF: FPGA: Recv EX2MV
17-02-28 20:14:56.793 -08 000000095 INF: Excitation Filter 2: Moved 107 steps in 374.9293 ms
17-02-28 20:14:56.793 -08 000000062 INF: Excitation Filter 1: Moved 107 steps in 375.1338 ms
17-02-28 20:14:56.793 -08 000000095 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 375.0575 ms
17-02-28 20:14:56.793 -08 000000095 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 375.1738 ms
17-02-28 20:14:56.793 -08 000000062 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 375.2395 ms
17-02-28 20:14:56.793 -08 000000062 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 375.4536 ms
17-02-28 20:14:56.793 -08 000000095 INF: ======================================
17-02-28 20:14:56.793 -08 000000062 INF: ======================================
17-02-28 20:14:56.795 -08 000000098 INF: Y Motor: Unshifted Position: 983211
17-02-28 20:14:56.795 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:56.795 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:56.795 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:56.796 -08 000000032 INF: ======================================
17-02-28 20:14:56.854 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:14:56.854 -08 000000098 INF: Y Motor: Moved to 14.8321 after 7861 ms
17-02-28 20:14:56.854 -08 000000098 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:56.868 -08 000000066 INF: Camera #2 ReleaseBuffer
17-02-28 20:14:56.868 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:14:56.902 -08 000000066 INF: ======================================
17-02-28 20:14:56.903 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:14:56.905 -08 000000106 INF: ======================================
17-02-28 20:14:56.916 -08 000000098 INF: Y Motor: Recv v 4097\r
17-02-28 20:14:56.916 -08 000000098 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:56.916 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:56.981 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:14:56.981 -08 000000098 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:56.981 -08 000000098 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:57.043 -08 000000098 INF: Y Motor: Recv v 134217728\r
17-02-28 20:14:57.043 -08 000000098 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:14:57.043 -08 000000098 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:57.043 -08 000000098 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:57.105 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:14:57.105 -08 000000098 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:57.105 -08 000000098 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:57.105 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:57.167 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:14:57.167 -08 000000098 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:57.167 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:57.229 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:14:57.229 -08 000000098 INF: ======================================
17-02-28 20:14:57.230 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:57.231 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:57.232 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.232 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:14:57.289 -08 000000102 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:14:57.289 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:57.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:57.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left===================
17-02-28 20:14:57.351 -08 000000044 INF: FPGA: Recv TDIYERD 1483213
17-02-28 20:14:57.351 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:14:57.417 -08 000000086 INF: FPGA: Recv ZADCR 32588
17-02-28 20:14:57.417 -08 000000018 INF: At scan end Y pos = 14.832 and Z pos = -0.125. Y moved -48.539 mm
17-02-28 20:14:57.417 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:14:57.476 -08 000000030 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:14:57.476 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:14:57.476 -08 000000018 INF: TDIScan finished after 11894.9776 ms
17-02-28 20:14:57.476 -08 000000018 INF: Image[0]: Y should trigger at 63.371 mm, 2nd row was at 64.280 mm (error = 0.909 mm)
17-02-28 20:14:57.476 -08 000000018 INF: Image[2]: Y should trigger at 63.371 mm, 2nd row was at 64.280 mm (error = 0.909 mm)
17-02-28 20:14:57.478 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.512 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.958 um
17-02-28 20:14:57.513 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.513 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:14:57.538 -08 000000057 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:14:57.539 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.539 -08 000000095 INF: ===================Dither Clean Up Command===================
17-02-28 20:14:57.539 -08 000000010 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:14:57.539 -08 000000044 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:14:57.540 -08 000000034 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:14:57.540 -08 000000034 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:14:57.540 -08 000000034 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:14:57.540 -08 000000044 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:57.540 -08 000000044 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:57.540 -08 000000038 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:57.540 -08 000000010 INF: ======================================
17-02-28 20:14:57.540 -08 000000037 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:57.541 -08 000000038 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:14:57.543 -08 000000037 INF: ===================LFT:Extracting coords===================
17-02-28 20:14:57.569 -08 000000037 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:57.570 -08 000000037 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:14:57.570 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.571 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.571 -08 000000030 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.571 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.571 -08 000000087 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:57.571 -08 000000030 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:57.571 -08 000000051 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:57.571 -08 000000109 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:57.603 -08 000000053 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:57.603 -08 000000053 INF: FPGA: Recv ZSEL 
17-02-28 20:14:57.603 -08 000000038 INF: FPGA: Xmit ZDACW 32896\n
17-02-28 20:14:57.604 -08 000000034 INF: ======================================
17-02-28 20:14:57.605 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:57.605 -08 000000044 INF: ======================================
17-02-28 20:14:57.645 -08 000000087 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:57.645 -08 000000030 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:57.645 -08 000000051 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:57.645 -08 000000109 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:57.665 -08 000000062 INF: FPGA: Recv ZDACW 
17-02-28 20:14:57.665 -08 000000038 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:14:57.666 -08 000000038 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:14:57.727 -08 000000101 INF: FPGA: Recv TDIBB
17-02-28 20:14:57.727 -08 000000038 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:57.728 -08 000000038 INF: ======================================
17-02-28 20:14:57.796 -08 000000030 INF: LFT found best fwhm score 2.000031 in 151 ms
17-02-28 20:14:57.796 -08 000000030 INF: LFT found good score at index 7137 with fwhm value 2.000031. Next cycle, cycle 4 starting Z position for top surface is at -0.128 mm FC:A, C:3,L:5,T
17-02-28 20:14:57.796 -08 000000087 INF: LFT found best fwhm score 2.000512 in 151 ms
17-02-28 20:14:57.796 -08 000000087 INF: LFT found good score at index 6553 with fwhm value 2.000512. Next cycle, cycle 4 starting Z position for top surface is at -0.128 mm FC:A, C:3,L:5,T
17-02-28 20:14:57.796 -08 000000051 INF: LFT found best fwhm score 2.135241 in 151 ms
17-02-28 20:14:57.797 -08 000000030 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.797 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.797 -08 000000051 INF: LFT found good score at index 4669 with fwhm value 2.135241. Next cycle, cycle 4 starting Z position for top surface is at -0.128 mm FC:A, C:3,L:5,T
17-02-28 20:14:57.797 -08 000000030 INF: ======================================
17-02-28 20:14:57.797 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.797 -08 000000087 INF: ======================================
17-02-28 20:14:57.797 -08 000000051 INF: ======================================
17-02-28 20:14:57.797 -08 000000109 INF: LFT found best fwhm score 2.000039 in 151 ms
17-02-28 20:14:57.797 -08 000000109 INF: LFT found good score at index 561 with fwhm value 2.000039. Next cycle, cycle 4 starting Z position for top surface is at -0.128 mm FC:A, C:3,L:5,T
17-02-28 20:14:57.798 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.798 -08 000000109 INF: ======================================
17-02-28 20:14:57.798 -08 000000037 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:57.799 -08 000000037 INF: LFT weighted average best Z for top surface is at -0.128mm FC:A, C:3,L:5,T
17-02-28 20:14:57.800 -08 000000037 INF: ======================================
17-02-28 20:14:57.801 -08 000000095 INF: ======================================
17-02-28 20:14:57.802 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:14:57.804 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.804 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011===================
17-02-28 20:14:57.804 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011===================
17-02-28 20:14:57.805 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:14:57.805 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011===================
17-02-28 20:14:57.805 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:14:57.805 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left===================
17-02-28 20:14:57.828 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:14:57.828 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:57.829 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011===================
17-02-28 20:14:57.829 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:57.829 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011===================
17-02-28 20:14:57.829 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:14:57.829 -08 000000018 INF: Transformed XStagePosition from 17.75293 mm to 17.7632796876132 mm.
17-02-28 20:14:57.841 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4821813333556 mm.
17-02-28 20:14:57.841 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2821813333556 mm.
17-02-28 20:14:57.841 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3729313333556 mm.
17-02-28 20:14:57.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:14:57.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.844 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -125.5 um, section = E_1
17-02-28 20:14:57.863 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:57.864 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:57.866 -08 000000095 INF: ===================MoveEmissionFilters===================
17-02-28 20:14:57.866 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:57.867 -08 000000028 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:57.867 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:14:57.867 -08 000000050 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:14:57.868 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:57.897 -08 000000028 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:57.900 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:14:57.903 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:57.904 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:57.909 -08 000000037 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:14:57.909 -08 000000083 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:57.910 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":5,"Tile":1101,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF250","HCSMMF213","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:57.910 -08 000000037 INF: ======================================
17-02-28 20:14:57.912 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:14:57.912 -08 000000083 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:57.913 -08 000000038 INF: ===================Move X,Y, Parallel===================
17-02-28 20:14:57.914 -08 000000092 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:14:57.914 -08 000000066 INF: ===================Move X Motor without settling===================
17-02-28 20:14:57.915 -08 000000092 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:14:57.915 -08 000000066 INF: X Motor: Xmit PR VM\n
17-02-28 20:14:57.915 -08 000000037 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:14:57.915 -08 000000092 INF: ======================================
17-02-28 20:14:57.915 -08 000000105 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:57.916 -08 000000105 INF: Y Motor: Moving to 64.4822 mm @25.000 mm/sec, started at 14.8321 mm
17-02-28 20:14:57.916 -08 000000105 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:57.916 -08 000000105 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:57.916 -08 000000037 INF: ======================================
17-02-28 20:14:57.928 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:14:57.928 -08 000000089 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:14:57.928 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:57.928 -08 000000083 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:57.929 -08 000000089 INF: ======================================
17-02-28 20:14:57.929 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:57.929 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:57.929 -08 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:57.930 -08 000000083 INF: ======================================
17-02-28 20:14:57.930 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:57.930 -08 000000075 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:14:57.930 -08 000000028 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:57.931 -08 000000089 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:14:57.931 -08 000000064 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:14:57.931 -08 000000037 INF: ===================Camera Arm TDI===================
17-02-28 20:14:57.931 -08 000000089 INF: ======================================
17-02-28 20:14:57.931 -08 000000075 INF: ======================================
17-02-28 20:14:57.931 -08 000000083 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:14:57.932 -08 000000083 INF: ======================================
17-02-28 20:14:57.932 -08 000000037 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:57.933 -08 000000089 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:14:57.933 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:57.933 -08 000000037 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:57.933 -08 000000028 INF: ======================================
17-02-28 20:14:57.933 -08 000000089 INF: ======================================
17-02-28 20:14:57.934 -08 000000051 INF: ======================================
17-02-28 20:14:57.935 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:57.936 -08 000000087 INF: ======================================
17-02-28 20:14:57.937 -08 000000095 INF: ======================================
17-02-28 20:14:57.966 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":5,"Tile":1106,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF270","HCSMMF236","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:57.977 -08 000000087 INF: FPGA: Recv ZSEL 
17-02-28 20:14:57.979 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:14:57.979 -08 000000105 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:57.979 -08 000000105 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:57.979 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:57.979 -08 000000066 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:14:57.979 -08 000000066 INF: X Motor: Xmit PR VI\n
17-02-28 20:14:57.979 -08 000000064 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:14:58.039 -08 000000081 INF: FPGA: Recv TDIBB
17-02-28 20:14:58.040 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:58.041 -08 000000066 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:14:58.041 -08 000000066 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:14:58.041 -08 000000066 INF: X Motor: Moving to 17.7633 mm @15.000 mm/sec, started at 16.6611 mm
17-02-28 20:14:58.041 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:14:58.041 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:58.041 -08 000000066 INF: X Motor: Xmit MA -16891\n
17-02-28 20:14:58.041 -08 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:58.042 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:58.043 -08 000000064 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:14:58.043 -08 000000064 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:14:58.043 -08 000000064 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:14:58.051 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":5,"Tile":1103,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF197","HCSMMF277","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.054 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":5,"Tile":1108,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF224","HCSMMF273","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.055 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":5,"Tile":1110,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF221","HCSMMF214","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.060 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":5,"Tile":1104,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF286","HCSMMF178","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.060 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":5,"Tile":1109,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF187","HCSMMF184","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.061 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":5,"Tile":1113,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF208","HCSMMF261","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.062 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":5,"Tile":1112,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF234","HCSMMF200","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.062 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":5,"Tile":1114,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF284","HCSMMF204","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.063 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":5,"Tile":1122,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF206","HCSMMF180","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.064 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":5,"Tile":1105,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF271","HCSMMF217","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.065 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":5,"Tile":1124,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF220","HCSMMF186","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.065 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":5,"Tile":1115,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF211","HCSMMF194","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.066 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":5,"Tile":1116,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF192","HCSMMF227","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.067 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":5,"Tile":1102,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF188","HCSMMF205","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.068 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":5,"Tile":1118,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF229","HCSMMF244","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.068 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":5,"Tile":1121,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF210","HCSMMF223","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.069 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":5,"Tile":1111,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF202","HCSMMF212","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.070 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":5,"Tile":1117,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF237","HCSMMF259","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.071 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":5,"Tile":1127,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF264","HCSMMF238","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.072 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":5,"Tile":1126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF251","HCSMMF283","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.072 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":5,"Tile":1125,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF260","HCSMMF222","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.073 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":5,"Tile":1128,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF228","HCSMMF246","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.074 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":5,"Tile":1120,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF225","HCSMMF276","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.075 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":5,"Tile":1119,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF196","HCSMMF235","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.076 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":5,"Tile":1123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF254","HCSMMF185","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.080 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":5,"Tile":1107,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF248","HCSMMF249","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.082 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:58.088 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:14:58.102 -08 000000069 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:58.102 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:58.103 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:14:58.103 -08 000000105 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:58.103 -08 000000066 INF: X Motor: Recv MA -16891\r\n>
17-02-28 20:14:58.103 -08 000000105 INF: Y Motor: Set target position to 5948218 encoder counts
17-02-28 20:14:58.103 -08 000000105 INF: Y Motor: Xmit s r0xca 5948218\r
17-02-28 20:14:58.103 -08 000000066 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:14:58.104 -08 000000064 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:14:58.104 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:58.106 -08 000000064 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:14:58.106 -08 000000064 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:14:58.106 -08 000000064 INF: Z Motor: Arming to move to -0.0855 mm
17-02-28 20:14:58.106 -08 000000064 INF: FPGA: Xmit ZYT 6428218 4\n
17-02-28 20:14:58.163 -08 000000053 INF: FPGA: Recv ZYT 
17-02-28 20:14:58.163 -08 000000064 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1483211 enc / 14.832 mm / ) = 6428218 enc / 64.282 mm
17-02-28 20:14:58.163 -08 000000064 INF: FPGA: Xmit ZARM 22410\n
17-02-28 20:14:58.165 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:14:58.165 -08 000000105 INF: Y Motor: Start the move command
17-02-28 20:14:58.165 -08 000000105 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:58.185 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:58.185 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:14:58.224 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:58.225 -08 000000051 INF: FPGA: Recv ZARM
17-02-28 20:14:58.225 -08 000000064 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9313 ms
17-02-28 20:14:58.225 -08 000000064 INF: Z Motor: ArmAbsStepped took 118.9558 ms
17-02-28 20:14:58.225 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:58.227 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:14:58.227 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:14:58.227 -08 000000105 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:14:58.227 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:58.228 -08 000000064 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:14:58.229 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:14:58.230 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:14:58.230 -08 000000064 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:14:58.230 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:14:58.232 -08 000000064 INF: ======================================
17-02-28 20:14:58.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:58.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 2 of 5 seconds left===================
17-02-28 20:14:58.328 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:58.333 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:14:58.355 -08 000000105 INF: Y Motor: Unshifted Position: 1066044
17-02-28 20:14:58.405 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:58.431 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:58.436 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:14:58.524 -08 000000037 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:58.524 -08 000000037 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:58.524 -08 000000037 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:58.526 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:58.534 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:58.539 -08 000000037 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:58.541 -08 000000037 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:58.665 -08 000000105 INF: Y Motor: Unshifted Position: 1775708
17-02-28 20:14:58.715 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:58.727 -08 000000066 INF: X Motor: Xmit PR ER\n
17-02-28 20:14:58.789 -08 000000066 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:14:58.789 -08 000000066 INF: X Motor: Moved to 17.7622 after 685 ms
17-02-28 20:14:58.789 -08 000000066 INF: ======================================
17-02-28 20:14:58.821 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:14:58.839 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:58.979 -08 000000105 INF: Y Motor: Unshifted Position: 2555730
17-02-28 20:14:59.029 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:59.135 -08 000000037 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:59.135 -08 000000037 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:59.135 -08 000000037 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:59.150 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:59.150 -08 000000037 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:59.152 -08 000000037 INF: ===================Camera Arm TDI===================
17-02-28 20:14:59.153 -08 000000037 INF: ======================================
17-02-28 20:14:59.154 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:59.156 -08 000000050 INF: ======================================
17-02-28 20:14:59.289 -08 000000105 INF: Y Motor: Unshifted Position: 3335672
17-02-28 20:14:59.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:59.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 1 of 5 seconds left===================
17-02-28 20:14:59.339 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:59.463 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:59.603 -08 000000105 INF: Y Motor: Unshifted Position: 4111580
17-02-28 20:14:59.653 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:59.775 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:59.912 -08 000000105 INF: Y Motor: Unshifted Position: 4894015
17-02-28 20:14:59.962 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:00.087 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:00.225 -08 000000105 INF: Y Motor: Unshifted Position: 5675779
17-02-28 20:15:00.275 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:00.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:00.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:00.294 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:15:00.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:00.393 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:15:00.399 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:00.474 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`9600 (0x03)\r\n(0xFF)
17-02-28 20:15:00.474 -08 000000042 INF: Current Position of Pump is: 9600
17-02-28 20:15:00.539 -08 000000105 INF: Y Motor: Unshifted Position: 5948220
17-02-28 20:15:00.539 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:00.539 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:00.574 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:15:00.598 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:15:00.598 -08 000000105 INF: Y Motor: Moved to 64.4822 after 2371 ms
17-02-28 20:15:00.598 -08 000000105 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:00.660 -08 000000105 INF: Y Motor: Recv v 4096\r
17-02-28 20:15:00.660 -08 000000105 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:00.660 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:00.661 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`9600 (0x03)\r\n(0xFF)
17-02-28 20:15:00.661 -08 000000042 INF: Current Position of Pump is: 9600
17-02-28 20:15:00.661 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC===================
17-02-28 20:15:00.725 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:15:00.725 -08 000000105 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:00.725 -08 000000105 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:00.761 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD9600R\r
17-02-28 20:15:00.785 -08 000000105 INF: Y Motor: Recv v 402653184\r
17-02-28 20:15:00.785 -08 000000105 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:15:00.785 -08 000000105 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:00.785 -08 000000105 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:00.846 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:00.847 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:15:00.847 -08 000000105 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:00.847 -08 000000105 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:00.847 -08 000000105 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:00.914 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:15:00.914 -08 000000105 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:00.914 -08 000000105 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:00.946 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:00.975 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:15:00.975 -08 000000105 INF: ======================================
17-02-28 20:15:00.976 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:15:00.977 -08 000000038 INF: ======================================
17-02-28 20:15:00.978 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:00.980 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:00.980 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:15:00.980 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:15:01.035 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:01.036 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:01.036 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:15:01.096 -08 000000062 INF: FPGA: Recv ZFREQCL
17-02-28 20:15:01.096 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:15:01.097 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:01.097 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:01.158 -08 000000098 INF: FPGA: Recv TDIYERD 6448220
17-02-28 20:15:01.158 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448220 counts (64.482 mm)
17-02-28 20:15:01.159 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:01.159 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:01.160 -08 000000039 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:01.160 -08 000000064 INF: ===================Set YMotor gains for scans===================
17-02-28 20:15:01.161 -08 000000064 INF: ======================================
17-02-28 20:15:01.161 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:01.161 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:15:01.162 -08 000000039 INF: FPGA: Xmit TDIYPOS 6337293\n
17-02-28 20:15:01.220 -08 000000108 INF: FPGA: Recv TDIYPOS
17-02-28 20:15:01.220 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:01.222 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:15:01.222 -08 000000039 INF: FPGA: Xmit TDIYARM3 139264 6428218 1 1\n
17-02-28 20:15:01.284 -08 000000076 INF: FPGA: Recv TDIYARM3
17-02-28 20:15:01.285 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:01.285 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:01.286 -08 000000039 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:01.287 -08 000000039 INF: ======================================
17-02-28 20:15:01.288 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:01.289 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:01.289 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:01.290 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:01.290 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:01.291 -08 000000062 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:15:01.291 -08 000000050 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:15:01.291 -08 000000062 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:15:01.291 -08 000000062 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:15:01.291 -08 000000062 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:15:01.291 -08 000000050 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:15:01.291 -08 000000050 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:15:01.291 -08 000000050 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:15:01.291 -08 000000062 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:15:01.292 -08 000000050 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:15:01.350 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:01.600 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:01.657 -08 000000098 INF: FPGA: Recv EX2MV
17-02-28 20:15:01.657 -08 000000098 INF: FPGA: Recv EX1MV
17-02-28 20:15:01.657 -08 000000050 INF: Excitation Filter 1: Moved -107 steps in 365.9486 ms
17-02-28 20:15:01.657 -08 000000050 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.1441 ms
17-02-28 20:15:01.657 -08 000000050 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.2771 ms
17-02-28 20:15:01.658 -08 000000062 INF: Excitation Filter 2: Moved -107 steps in 366.1163 ms
17-02-28 20:15:01.658 -08 000000062 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.5801 ms
17-02-28 20:15:01.658 -08 000000062 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.6543 ms
17-02-28 20:15:01.658 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:01.658 -08 000000062 INF: ======================================
17-02-28 20:15:01.658 -08 000000050 INF: ======================================
17-02-28 20:15:01.659 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:01.660 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:01.661 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:15:01.661 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:01.662 -08 000000064 INF: ===================FPGA Z Wait===================
17-02-28 20:15:01.662 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:15:01.662 -08 000000010 INF: ===================Camera TDI, Parallel===================
17-02-28 20:15:01.662 -08 000000038 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:15:01.662 -08 000000051 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:01.662 -08 000000051 INF: Y Motor: Moving to 14.8338 mm @6.500 mm/sec, started at 64.4822 mm
17-02-28 20:15:01.663 -08 000000051 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:01.663 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:01.663 -08 000000038 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:15:01.663 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:15:01.663 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:15:01.666 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:01.666 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:01.666 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:01.666 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:01.721 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:01.721 -08 000000051 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:01.721 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:01.786 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:01.786 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:01.816 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:01.816 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:01.817 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:01.817 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:01.850 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:15:01.850 -08 000000051 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:01.850 -08 000000051 INF: Y Motor: Set target position to 983384 encoder counts
17-02-28 20:15:01.850 -08 000000051 INF: Y Motor: Xmit s r0xca 983384\r
17-02-28 20:15:01.908 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:01.908 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:01.908 -08 000000051 INF: Y Motor: Start the move command
17-02-28 20:15:01.908 -08 000000051 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:01.966 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:01.966 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:01.967 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:01.967 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:01.972 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:01.973 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:01.973 -08 000000051 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:15:01.973 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.033 -08 000000102 INF: FPGA: Recv ZWAIT 
17-02-28 20:15:02.033 -08 000000064 INF: ======================================
17-02-28 20:15:02.097 -08 000000051 INF: Y Motor: Unshifted Position: 5884627
17-02-28 20:15:02.116 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:02.116 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:02.116 -08 000000047 INF: ===================Camera #2 Frame #5===================
17-02-28 20:15:02.117 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:02.117 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:02.117 -08 000000068 INF: ===================Camera #0 Frame #5===================
17-02-28 20:15:02.147 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.222 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:02.271 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.282 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:02.282 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:02.282 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:02.282 -08 000000047 INF: ===================Camera #2 Frame #11===================
17-02-28 20:15:02.289 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:02.289 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:02.289 -08 000000068 INF: ===================Camera #0 Frame #11===================
17-02-28 20:15:02.407 -08 000000051 INF: Y Motor: Unshifted Position: 5682916
17-02-28 20:15:02.457 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.460 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:02.460 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:02.460 -08 000000047 INF: ===================Camera #2 Frame #17===================
17-02-28 20:15:02.465 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:02.465 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:02.465 -08 000000068 INF: ===================Camera #0 Frame #17===================
17-02-28 20:15:02.532 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:02.584 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.595 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:02.595 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:02.595 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:15:02.638 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:15:02.638 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:15:02.638 -08 000000047 INF: ===================Camera #2 Frame #24===================
17-02-28 20:15:02.641 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:15:02.641 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:15:02.641 -08 000000068 INF: ===================Camera #0 Frame #24===================
17-02-28 20:15:02.720 -08 000000051 INF: Y Motor: Unshifted Position: 5479470
17-02-28 20:15:02.770 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.810 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:15:02.810 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:15:02.810 -08 000000047 INF: ===================Camera #2 Frame #30===================
17-02-28 20:15:02.813 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:15:02.813 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:15:02.813 -08 000000068 INF: ===================Camera #0 Frame #30===================
17-02-28 20:15:02.894 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.988 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:15:02.988 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:15:02.988 -08 000000047 INF: ===================Camera #2 Frame #37===================
17-02-28 20:15:02.989 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:15:02.989 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:15:02.989 -08 000000068 INF: ===================Camera #0 Frame #37===================
17-02-28 20:15:03.033 -08 000000051 INF: Y Motor: Unshifted Position: 5275799
17-02-28 20:15:03.083 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:03.169 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:15:03.169 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:15:03.169 -08 000000068 INF: ===================Camera #0 Frame #43===================
17-02-28 20:15:03.171 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:15:03.171 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:15:03.171 -08 000000047 INF: ===================Camera #2 Frame #43===================
17-02-28 20:15:03.207 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:03.343 -08 000000051 INF: Y Motor: Unshifted Position: 5074301
17-02-28 20:15:03.343 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:15:03.343 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:15:03.343 -08 000000068 INF: ===================Camera #0 Frame #50===================
17-02-28 20:15:03.348 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:15:03.348 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:15:03.348 -08 000000047 INF: ===================Camera #2 Frame #50===================
17-02-28 20:15:03.393 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:03.515 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:15:03.515 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:15:03.515 -08 000000068 INF: ===================Camera #0 Frame #56===================
17-02-28 20:15:03.520 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:03.522 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:15:03.522 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:15:03.522 -08 000000047 INF: ===================Camera #2 Frame #56===================
17-02-28 20:15:03.656 -08 000000051 INF: Y Motor: Unshifted Position: 4870633
17-02-28 20:15:03.690 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:15:03.690 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:15:03.690 -08 000000068 INF: ===================Camera #0 Frame #63===================
17-02-28 20:15:03.695 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:15:03.702 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:15:03.702 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:15:03.702 -08 000000047 INF: ===================Camera #2 Frame #63===================
17-02-28 20:15:03.706 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:03.779 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:03.830 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:03.871 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:15:03.871 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:15:03.871 -08 000000068 INF: ===================Camera #0 Frame #69===================
17-02-28 20:15:03.879 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:03.885 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:15:03.885 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:15:03.885 -08 000000047 INF: ===================Camera #2 Frame #70===================
17-02-28 20:15:03.968 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:03.969 -08 000000051 INF: Y Motor: Unshifted Position: 4667187
17-02-28 20:15:04.019 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:04.048 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:15:04.048 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:15:04.048 -08 000000068 INF: ===================Camera #0 Frame #76===================
17-02-28 20:15:04.065 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:15:04.065 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:15:04.065 -08 000000047 INF: ===================Camera #2 Frame #76===================
17-02-28 20:15:04.143 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:04.218 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:04.221 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:15:04.221 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:15:04.221 -08 000000068 INF: ===================Camera #0 Frame #82===================
17-02-28 20:15:04.234 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:15:04.234 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:15:04.234 -08 000000047 INF: ===================Camera #2 Frame #83===================
17-02-28 20:15:04.278 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:04.278 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:04.278 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:15:04.279 -08 000000051 INF: Y Motor: Unshifted Position: 4465454
17-02-28 20:15:04.329 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:04.389 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:15:04.389 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:15:04.389 -08 000000068 INF: ===================Camera #0 Frame #88===================
17-02-28 20:15:04.407 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:15:04.407 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:15:04.407 -08 000000047 INF: ===================Camera #2 Frame #89===================
17-02-28 20:15:04.456 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:04.557 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:15:04.557 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:15:04.557 -08 000000068 INF: ===================Camera #0 Frame #94===================
17-02-28 20:15:04.576 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:15:04.576 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:15:04.576 -08 000000047 INF: ===================Camera #2 Frame #95===================
17-02-28 20:15:04.592 -08 000000051 INF: Y Motor: Unshifted Position: 4262011
17-02-28 20:15:04.642 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:04.726 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:15:04.726 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:15:04.726 -08 000000068 INF: ===================Camera #0 Frame #101===================
17-02-28 20:15:04.745 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:15:04.745 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:15:04.745 -08 000000047 INF: ===================Camera #2 Frame #101===================
17-02-28 20:15:04.766 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:04.774 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:04.775 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:04.775 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:04.775 -08 000000042 INF: WaitCommand(40000) start
17-02-28 20:15:04.776 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 40 of 40 seconds left===================
17-02-28 20:15:04.898 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:15:04.898 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:15:04.898 -08 000000068 INF: ===================Camera #0 Frame #107===================
17-02-28 20:15:04.907 -08 000000051 INF: Y Motor: Unshifted Position: 4057687
17-02-28 20:15:04.915 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:15:04.915 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:15:04.915 -08 000000047 INF: ===================Camera #2 Frame #108===================
17-02-28 20:15:04.957 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.067 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:15:05.067 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:15:05.067 -08 000000068 INF: ===================Camera #0 Frame #113===================
17-02-28 20:15:05.079 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.088 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:15:05.088 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:15:05.088 -08 000000047 INF: ===================Camera #2 Frame #114===================
17-02-28 20:15:05.215 -08 000000051 INF: Y Motor: Unshifted Position: 3855535
17-02-28 20:15:05.235 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:15:05.235 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:15:05.235 -08 000000068 INF: ===================Camera #0 Frame #119===================
17-02-28 20:15:05.257 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:15:05.257 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:15:05.257 -08 000000047 INF: ===================Camera #2 Frame #120===================
17-02-28 20:15:05.265 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.394 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.403 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:15:05.403 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:15:05.403 -08 000000068 INF: ===================Camera #0 Frame #126===================
17-02-28 20:15:05.426 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:15:05.426 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:15:05.426 -08 000000047 INF: ===================Camera #2 Frame #126===================
17-02-28 20:15:05.530 -08 000000051 INF: Y Motor: Unshifted Position: 3652518
17-02-28 20:15:05.575 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:15:05.575 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:15:05.575 -08 000000068 INF: ===================Camera #0 Frame #132===================
17-02-28 20:15:05.580 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.596 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:15:05.596 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:15:05.596 -08 000000047 INF: ===================Camera #2 Frame #133===================
17-02-28 20:15:05.702 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.743 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:15:05.743 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:15:05.743 -08 000000068 INF: ===================Camera #0 Frame #138===================
17-02-28 20:15:05.768 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:15:05.768 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:15:05.768 -08 000000047 INF: ===================Camera #2 Frame #139===================
17-02-28 20:15:05.776 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:05.776 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 39 of 40 seconds left===================
17-02-28 20:15:05.839 -08 000000051 INF: Y Motor: Unshifted Position: 3449712
17-02-28 20:15:05.889 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.911 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:15:05.911 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:15:05.911 -08 000000068 INF: ===================Camera #0 Frame #144===================
17-02-28 20:15:05.937 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:15:05.937 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:15:05.937 -08 000000047 INF: ===================Camera #2 Frame #145===================
17-02-28 20:15:06.018 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.079 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:15:06.079 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:15:06.079 -08 000000068 INF: ===================Camera #0 Frame #151===================
17-02-28 20:15:06.106 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:15:06.106 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:15:06.106 -08 000000047 INF: ===================Camera #2 Frame #152===================
17-02-28 20:15:06.152 -08 000000051 INF: Y Motor: Unshifted Position: 3247353
17-02-28 20:15:06.202 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.251 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:15:06.251 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:15:06.251 -08 000000068 INF: ===================Camera #0 Frame #157===================
17-02-28 20:15:06.279 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:15:06.279 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:15:06.279 -08 000000047 INF: ===================Camera #2 Frame #158===================
17-02-28 20:15:06.327 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.419 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:15:06.419 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:15:06.419 -08 000000068 INF: ===================Camera #0 Frame #163===================
17-02-28 20:15:06.448 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:15:06.448 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:15:06.448 -08 000000047 INF: ===================Camera #2 Frame #164===================
17-02-28 20:15:06.467 -08 000000051 INF: Y Motor: Unshifted Position: 3043910
17-02-28 20:15:06.517 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.587 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:15:06.587 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:15:06.587 -08 000000068 INF: ===================Camera #0 Frame #169===================
17-02-28 20:15:06.617 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:15:06.617 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:15:06.617 -08 000000047 INF: ===================Camera #2 Frame #170===================
17-02-28 20:15:06.640 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.755 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:15:06.755 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:15:06.755 -08 000000068 INF: ===================Camera #0 Frame #175===================
17-02-28 20:15:06.776 -08 000000051 INF: Y Motor: Unshifted Position: 2842196
17-02-28 20:15:06.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:06.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 38 of 40 seconds left===================
17-02-28 20:15:06.786 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:15:06.786 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:15:06.786 -08 000000047 INF: ===================Camera #2 Frame #177===================
17-02-28 20:15:06.826 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.923 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:15:06.923 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:15:06.923 -08 000000068 INF: ===================Camera #0 Frame #182===================
17-02-28 20:15:06.953 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.958 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:15:06.958 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:15:06.958 -08 000000047 INF: ===================Camera #2 Frame #183===================
17-02-28 20:15:07.090 -08 000000051 INF: Y Motor: Unshifted Position: 2638091
17-02-28 20:15:07.094 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:15:07.094 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:15:07.094 -08 000000068 INF: ===================Camera #0 Frame #188===================
17-02-28 20:15:07.127 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:15:07.127 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:15:07.127 -08 000000047 INF: ===================Camera #2 Frame #189===================
17-02-28 20:15:07.140 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:07.262 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:15:07.262 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:15:07.262 -08 000000068 INF: ===================Camera #0 Frame #194===================
17-02-28 20:15:07.264 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:07.296 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:15:07.296 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:15:07.296 -08 000000047 INF: ===================Camera #2 Frame #195===================
17-02-28 20:15:07.403 -08 000000051 INF: Y Motor: Unshifted Position: 2436389
17-02-28 20:15:07.430 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:15:07.430 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:15:07.430 -08 000000068 INF: ===================Camera #0 Frame #200===================
17-02-28 20:15:07.453 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:07.465 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:15:07.465 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:15:07.465 -08 000000047 INF: ===================Camera #2 Frame #202===================
17-02-28 20:15:07.577 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:07.598 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:15:07.598 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:15:07.598 -08 000000068 INF: ===================Camera #0 Frame #206===================
17-02-28 20:15:07.637 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:15:07.637 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:15:07.637 -08 000000047 INF: ===================Camera #2 Frame #208===================
17-02-28 20:15:07.714 -08 000000051 INF: Y Motor: Unshifted Position: 2232935
17-02-28 20:15:07.764 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:07.766 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:15:07.766 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:15:07.766 -08 000000068 INF: ===================Camera #0 Frame #213===================
17-02-28 20:15:07.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:07.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 37 of 40 seconds left===================
17-02-28 20:15:07.806 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:15:07.806 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:15:07.806 -08 000000047 INF: ===================Camera #2 Frame #214===================
17-02-28 20:15:07.887 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:07.937 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:15:07.937 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:15:07.937 -08 000000068 INF: ===================Camera #0 Frame #219===================
17-02-28 20:15:07.975 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:15:07.975 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:15:07.975 -08 000000047 INF: ===================Camera #2 Frame #220===================
17-02-28 20:15:08.026 -08 000000051 INF: Y Motor: Unshifted Position: 2029267
17-02-28 20:15:08.076 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:08.105 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:15:08.105 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:15:08.105 -08 000000068 INF: ===================Camera #0 Frame #225===================
17-02-28 20:15:08.144 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:15:08.144 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:15:08.144 -08 000000047 INF: ===================Camera #2 Frame #227===================
17-02-28 20:15:08.200 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:08.273 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:15:08.273 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:15:08.273 -08 000000068 INF: ===================Camera #0 Frame #231===================
17-02-28 20:15:08.316 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:15:08.316 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:15:08.316 -08 000000047 INF: ===================Camera #2 Frame #233===================
17-02-28 20:15:08.336 -08 000000051 INF: Y Motor: Unshifted Position: 1827759
17-02-28 20:15:08.386 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:08.441 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:15:08.441 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:15:08.441 -08 000000068 INF: ===================Camera #0 Frame #237===================
17-02-28 20:15:08.485 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:15:08.485 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:15:08.485 -08 000000047 INF: ===================Camera #2 Frame #239===================
17-02-28 20:15:08.513 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:08.609 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:15:08.609 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:15:08.609 -08 000000068 INF: ===================Camera #0 Frame #244===================
17-02-28 20:15:08.649 -08 000000051 INF: Y Motor: Unshifted Position: 1624100
17-02-28 20:15:08.654 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:15:08.654 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:15:08.654 -08 000000047 INF: ===================Camera #2 Frame #245===================
17-02-28 20:15:08.699 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:08.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:08.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 36 of 40 seconds left===================
17-02-28 20:15:08.780 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:15:08.780 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:15:08.780 -08 000000068 INF: ===================Camera #0 Frame #250===================
17-02-28 20:15:08.823 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:08.823 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:15:08.823 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:15:08.823 -08 000000047 INF: ===================Camera #2 Frame #252===================
17-02-28 20:15:08.948 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:15:08.948 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:15:08.948 -08 000000068 INF: ===================Camera #0 Frame #256===================
17-02-28 20:15:08.962 -08 000000051 INF: Y Motor: Unshifted Position: 1420642
17-02-28 20:15:08.995 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:15:08.995 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:15:08.995 -08 000000047 INF: ===================Camera #2 Frame #258===================
17-02-28 20:15:09.012 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:09.117 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:15:09.117 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:15:09.117 -08 000000068 INF: ===================Camera #0 Frame #262===================
17-02-28 20:15:09.136 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:09.165 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:15:09.165 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:15:09.165 -08 000000047 INF: ===================Camera #2 Frame #264===================
17-02-28 20:15:09.272 -08 000000051 INF: Y Motor: Unshifted Position: 1218922
17-02-28 20:15:09.287 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:15:09.287 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:15:09.287 -08 000000068 INF: ===================Camera #0 Frame #269===================
17-02-28 20:15:09.322 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:09.336 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:15:09.336 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:15:09.336 -08 000000047 INF: ===================Camera #2 Frame #270===================
17-02-28 20:15:09.400 -08 000000102 INF: FPGA: Recv TDIYWAIT
17-02-28 20:15:09.401 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:09.402 -08 000000038 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:15:09.403 -08 000000052 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:15:09.404 -08 000000034 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:15:09.404 -08 000000052 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:15:09.404 -08 000000052 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:15:09.404 -08 000000052 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:15:09.404 -08 000000034 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:15:09.404 -08 000000034 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:15:09.404 -08 000000034 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:15:09.404 -08 000000052 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:15:09.405 -08 000000034 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:15:09.450 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:09.460 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:15:09.460 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:15:09.460 -08 000000068 INF: ===================Camera #0 Frame #272===================
17-02-28 20:15:09.470 -08 000000068 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:15:09.471 -08 000000068 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:09.586 -08 000000051 INF: Y Motor: Unshifted Position: 1014606
17-02-28 20:15:09.600 -08 000000068 INF: Camera #0 ReleaseBuffer
17-02-28 20:15:09.600 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:15:09.600 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:15:09.600 -08 000000047 INF: ===================Camera #2 Frame #272===================
17-02-28 20:15:09.600 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:15:09.606 -08 000000047 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:15:09.607 -08 000000047 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:09.630 -08 000000068 INF: ======================================
17-02-28 20:15:09.636 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:09.772 -08 000000051 INF: Y Motor: Unshifted Position: 983383
17-02-28 20:15:09.772 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:09.772 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:09.777 -08 000000047 INF: Camera #2 ReleaseBuffer
17-02-28 20:15:09.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:09.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 35 of 40 seconds left===================
17-02-28 20:15:09.777 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:15:09.813 -08 000000047 INF: ======================================
17-02-28 20:15:09.815 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:15:09.816 -08 000000010 INF: ======================================
17-02-28 20:15:09.832 -08 000000075 INF: FPGA: Recv EX1MV
17-02-28 20:15:09.832 -08 000000075 INF: FPGA: Recv EX2MV
17-02-28 20:15:09.832 -08 000000034 INF: Excitation Filter 2: Moved 107 steps in 427.9857 ms
17-02-28 20:15:09.832 -08 000000052 INF: Excitation Filter 1: Moved 107 steps in 428.156 ms
17-02-28 20:15:09.832 -08 000000052 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 428.2822 ms
17-02-28 20:15:09.832 -08 000000034 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 428.091 ms
17-02-28 20:15:09.832 -08 000000034 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 428.3001 ms
17-02-28 20:15:09.832 -08 000000052 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 428.3525 ms
17-02-28 20:15:09.832 -08 000000034 INF: ======================================
17-02-28 20:15:09.832 -08 000000052 INF: ======================================
17-02-28 20:15:09.834 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:15:09.834 -08 000000051 INF: Y Motor: Moved to 14.8338 after 7860 ms
17-02-28 20:15:09.834 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:09.834 -08 000000051 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:09.835 -08 000000038 INF: ======================================
17-02-28 20:15:09.898 -08 000000051 INF: Y Motor: Recv v 4097\r
17-02-28 20:15:09.898 -08 000000051 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:09.898 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:09.958 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:15:09.958 -08 000000051 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:09.958 -08 000000051 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:10.024 -08 000000051 INF: Y Motor: Recv v 134217728\r
17-02-28 20:15:10.024 -08 000000051 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:15:10.024 -08 000000051 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:10.024 -08 000000051 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:10.110 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:15:10.110 -08 000000051 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:10.110 -08 000000051 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:10.110 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:10.163 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:10.163 -08 000000051 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:10.163 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:10.225 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:10.226 -08 000000051 INF: ======================================
17-02-28 20:15:10.227 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:10.228 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:10.229 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.229 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:15:10.286 -08 000000058 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:15:10.286 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:10.347 -08 000000069 INF: FPGA: Recv TDIYERD 1483385
17-02-28 20:15:10.347 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:15:10.410 -08 000000087 INF: FPGA: Recv ZADCR 32938
17-02-28 20:15:10.410 -08 000000018 INF: At scan end Y pos = 14.834 and Z pos = -0.126. Y moved -48.539 mm
17-02-28 20:15:10.410 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:15:10.471 -08 000000089 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:15:10.471 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:15:10.471 -08 000000018 INF: TDIScan finished after 12641.3456 ms
17-02-28 20:15:10.471 -08 000000018 INF: Image[0]: Y should trigger at 63.373 mm, 2nd row was at 64.282 mm (error = 0.909 mm)
17-02-28 20:15:10.471 -08 000000018 INF: Image[2]: Y should trigger at 63.373 mm, 2nd row was at 64.282 mm (error = 0.909 mm)
17-02-28 20:15:10.473 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.508 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.886 um
17-02-28 20:15:10.508 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.509 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:15:10.536 -08 000000087 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:15:10.537 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.537 -08 000000104 INF: ===================Dither Clean Up Command===================
17-02-28 20:15:10.537 -08 000000039 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:15:10.537 -08 000000098 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:15:10.538 -08 000000051 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:15:10.538 -08 000000051 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:10.538 -08 000000039 INF: ======================================
17-02-28 20:15:10.538 -08 000000051 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:10.538 -08 000000098 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:15:10.538 -08 000000098 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:15:10.538 -08 000000045 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:15:10.538 -08 000000100 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:10.541 -08 000000045 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:15:10.541 -08 000000100 INF: ===================LFT:Extracting coords===================
17-02-28 20:15:10.566 -08 000000100 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:10.567 -08 000000100 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:15:10.568 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.568 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.568 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.568 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.568 -08 000000064 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:10.569 -08 000000034 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:10.569 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:10.569 -08 000000089 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:10.598 -08 000000030 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:10.598 -08 000000030 INF: FPGA: Recv ZSEL 
17-02-28 20:15:10.598 -08 000000045 INF: FPGA: Xmit ZDACW 32896\n
17-02-28 20:15:10.598 -08 000000098 INF: ======================================
17-02-28 20:15:10.601 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:10.601 -08 000000051 INF: ======================================
17-02-28 20:15:10.643 -08 000000064 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:10.643 -08 000000034 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:10.643 -08 000000089 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:10.643 -08 000000052 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:10.660 -08 000000092 INF: FPGA: Recv ZDACW 
17-02-28 20:15:10.661 -08 000000045 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:15:10.661 -08 000000045 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:15:10.722 -08 000000039 INF: FPGA: Recv TDIBB
17-02-28 20:15:10.722 -08 000000045 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:15:10.723 -08 000000045 INF: ======================================
17-02-28 20:15:10.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:10.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 34 of 40 seconds left===================
17-02-28 20:15:10.794 -08 000000064 INF: LFT found best fwhm score 2.000005 in 151 ms
17-02-28 20:15:10.794 -08 000000064 INF: LFT found good score at index 4301 with fwhm value 2.000005. Next cycle, cycle 4 starting Z position for top surface is at -0.129 mm FC:A, C:3,L:5,T
17-02-28 20:15:10.794 -08 000000089 INF: LFT found best fwhm score 2.000264 in 151 ms
17-02-28 20:15:10.794 -08 000000089 INF: LFT found good score at index 6637 with fwhm value 2.000264. Next cycle, cycle 4 starting Z position for top surface is at -0.130 mm FC:A, C:3,L:5,T
17-02-28 20:15:10.794 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.794 -08 000000034 INF: LFT found best fwhm score 2.000215 in 151 ms
17-02-28 20:15:10.794 -08 000000034 INF: LFT found good score at index 4261 with fwhm value 2.000215. Next cycle, cycle 4 starting Z position for top surface is at -0.129 mm FC:A, C:3,L:5,T
17-02-28 20:15:10.794 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.794 -08 000000052 INF: LFT found best fwhm score 2.18987 in 151 ms
17-02-28 20:15:10.795 -08 000000052 INF: LFT found good score at index 4553 with fwhm value 2.18987. Next cycle, cycle 4 starting Z position for top surface is at -0.129 mm FC:A, C:3,L:5,T
17-02-28 20:15:10.795 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.795 -08 000000064 INF: ======================================
17-02-28 20:15:10.795 -08 000000089 INF: ======================================
17-02-28 20:15:10.795 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.795 -08 000000034 INF: ======================================
17-02-28 20:15:10.795 -08 000000052 INF: ======================================
17-02-28 20:15:10.796 -08 000000100 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:10.797 -08 000000100 INF: LFT weighted average best Z for top surface is at -0.129mm FC:A, C:3,L:5,T
17-02-28 20:15:10.797 -08 000000100 INF: ======================================
17-02-28 20:15:10.798 -08 000000104 INF: ======================================
17-02-28 20:15:10.799 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:15:10.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:15:10.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:15:10.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:15:10.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011===================
17-02-28 20:15:10.802 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011===================
17-02-28 20:15:10.802 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:15:10.802 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011===================
17-02-28 20:15:10.802 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 34 of 40 seconds left, Waiting for image analysis===================
17-02-28 20:15:10.803 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 34 of 40 seconds left===================
17-02-28 20:15:10.826 -08 000000018 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:15:10.826 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:15:10.826 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:15:10.826 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:10.827 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:15:10.827 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:15:10.827 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:15:10.898 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":5,"Tile":1203,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF255","HCSMMF276","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:10.917 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:10.919 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:10.919 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:10.920 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:10.975 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:10.976 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:10.976 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:15:10.976 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:15:11.075 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":5,"Tile":1205,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF201","HCSMMF220","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.078 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":5,"Tile":1208,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF190","HCSMMF208","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.105 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":5,"Tile":1206,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF238","HCSMMF221","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.107 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":5,"Tile":1210,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF256","HCSMMF284","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.108 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":5,"Tile":1201,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF183","HCSMMF248","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.109 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":5,"Tile":1214,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF247","HCSMMF207","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.110 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":5,"Tile":1204,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF191","HCSMMF186","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.112 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":5,"Tile":1212,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF217","HCSMMF275","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.113 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":5,"Tile":1215,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF229","HCSMMF218","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.113 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":5,"Tile":1207,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF199","HCSMMF204","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.114 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":5,"Tile":1209,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF272","HCSMMF278","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.115 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":5,"Tile":1202,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF196","HCSMMF249","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.116 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":5,"Tile":1216,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF197","HCSMMF277","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.117 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":5,"Tile":1213,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF258","HCSMMF195","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.118 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":5,"Tile":1217,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF244","HCSMMF270","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.119 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":5,"Tile":1221,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF227","HCSMMF219","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.120 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":5,"Tile":1225,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF262","HCSMMF215","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.121 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":5,"Tile":1220,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF193","HCSMMF187","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.122 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":5,"Tile":1224,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF240","HCSMMF274","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.123 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":5,"Tile":1211,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF265","HCSMMF285","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.124 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":5,"Tile":1228,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF241","HCSMMF213","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.125 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":5,"Tile":1226,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF178","HCSMMF242","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.126 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":5,"Tile":1219,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF181","HCSMMF257","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.126 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":5,"Tile":1218,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF177","HCSMMF266","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.128 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":5,"Tile":1223,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF192","HCSMMF253","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.129 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":5,"Tile":1222,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF184","HCSMMF237","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.131 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":5,"Tile":1227,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF252","HCSMMF203","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.134 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:11.140 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:15:11.212 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:11.212 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:15:11.249 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:11.255 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:15:11.342 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:11.348 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:15:11.376 -08 000000076 INF: FPGA: Recv MIOCOMPR
17-02-28 20:15:11.376 -08 000000018 INF: Compensator: Moved OutOfPath in 400 ms
17-02-28 20:15:11.376 -08 000000018 INF: Lane 6, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:15:11.377 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:11.378 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:11.379 -08 000000058 INF: ===================Move Tilt Motor 2===================
17-02-28 20:15:11.379 -08 000000037 INF: ===================Move Tilt Motor 3===================
17-02-28 20:15:11.379 -08 000000104 INF: ===================Move Tilt Motor 1===================
17-02-28 20:15:11.379 -08 000000058 INF: ======================================
17-02-28 20:15:11.379 -08 000000104 INF: ======================================
17-02-28 20:15:11.379 -08 000000037 INF: ======================================
17-02-28 20:15:11.380 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:11.381 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:11.387 -08 000000018 INF: Transformed XStagePosition from 19.96393 mm to 19.9639301300049 mm.
17-02-28 20:15:11.396 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:15:11.396 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:15:11.396 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:15:11.396 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:11.397 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:11.400 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:15:11.400 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:15:11.400 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:15:11.438 -08 000000098 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:11.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:11.439 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:15:11.439 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1255 mm
17-02-28 20:15:11.439 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:15:11.504 -08 000000010 INF: FPGA: Recv ZTRG 
17-02-28 20:15:11.504 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:15:11.515 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:11.521 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:15:11.563 -08 000000050 INF: FPGA: Recv ZYT 
17-02-28 20:15:11.563 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:15:11.563 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:15:11.628 -08 000000045 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:15:11.628 -08 000000045 INF: FPGA: Recv ZMV 
17-02-28 20:15:11.628 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:15:11.628 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 65.0582 ms
17-02-28 20:15:11.628 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:15:11.690 -08 000000029 INF: FPGA: Recv ZDACR 60292
17-02-28 20:15:11.690 -08 000000018 INF: Z Motor: MoveAndTrigger took 251.3404 ms w/comms
17-02-28 20:15:11.690 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:15:11.690 -08 000000018 INF: Z Motor: MoveAbsStepped took 251.5236 ms
17-02-28 20:15:11.691 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:11.691 -08 000000018 INF: Transformed XStagePosition from 19.96393 mm to 19.9639301300049 mm.
17-02-28 20:15:11.700 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:15:11.700 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:11.700 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:11.700 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:15:11.700 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:15:11.718 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:11.752 -08 000000105 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:11.763 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:11.763 -08 000000018 INF: Transformed XStagePosition from 19.96393 mm to 19.9639301300049 mm.
17-02-28 20:15:11.772 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:15:11.772 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:11.772 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:11.774 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:11.774 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:15:11.774 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:11.775 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = F_1
17-02-28 20:15:11.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:11.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:11.776 -08 000000050 INF: ===================Move X,Y===================
17-02-28 20:15:11.776 -08 000000089 INF: ===================MoveEmissionFilters===================
17-02-28 20:15:11.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:11.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 33 of 40 seconds left===================
17-02-28 20:15:11.777 -08 000000050 INF: ===================Move X,Y, Parallel===================
17-02-28 20:15:11.777 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:11.777 -08 000000039 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:11.777 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:11.777 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:11.778 -08 000000057 INF: ===================Move X Motor without settling===================
17-02-28 20:15:11.778 -08 000000109 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:11.778 -08 000000057 INF: X Motor: Xmit PR VM\n
17-02-28 20:15:11.778 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:11.778 -08 000000039 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:11.778 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:11.778 -08 000000109 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8338 mm
17-02-28 20:15:11.778 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:11.778 -08 000000109 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:11.778 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:11.779 -08 000000098 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:15:11.779 -08 000000051 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:15:11.779 -08 000000066 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:15:11.779 -08 000000076 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:15:11.779 -08 000000010 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:15:11.779 -08 000000108 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:15:11.779 -08 000000064 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:15:11.780 -08 000000074 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:15:11.780 -08 000000076 INF: ======================================
17-02-28 20:15:11.780 -08 000000064 INF: ======================================
17-02-28 20:15:11.781 -08 000000108 INF: ======================================
17-02-28 20:15:11.782 -08 000000051 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:15:11.782 -08 000000098 INF: ======================================
17-02-28 20:15:11.782 -08 000000010 INF: ======================================
17-02-28 20:15:11.783 -08 000000051 INF: ======================================
17-02-28 20:15:11.783 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:11.783 -08 000000074 INF: ======================================
17-02-28 20:15:11.783 -08 000000066 INF: ======================================
17-02-28 20:15:11.784 -08 000000039 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:11.784 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:11.784 -08 000000087 INF: ======================================
17-02-28 20:15:11.785 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:11.785 -08 000000039 INF: ======================================
17-02-28 20:15:11.785 -08 000000081 INF: ======================================
17-02-28 20:15:11.786 -08 000000055 INF: ======================================
17-02-28 20:15:11.786 -08 000000089 INF: ======================================
17-02-28 20:15:11.816 -08 000000057 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:15:11.816 -08 000000057 INF: X Motor: Xmit PR VI\n
17-02-28 20:15:11.816 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:15:11.816 -08 000000109 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:11.816 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:11.878 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:15:11.878 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:11.880 -08 000000057 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:15:11.880 -08 000000057 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:15:11.880 -08 000000057 INF: X Motor: Moving to 19.9639 mm @15.000 mm/sec, started at 17.7622 mm
17-02-28 20:15:11.880 -08 000000057 INF: X Motor: Xmit MA -15989\n
17-02-28 20:15:11.942 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:15:11.942 -08 000000109 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:11.942 -08 000000109 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:15:11.942 -08 000000109 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:15:11.943 -08 000000057 INF: X Motor: Recv MA -15989\r\n>
17-02-28 20:15:11.943 -08 000000057 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:15:12.005 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:15:12.005 -08 000000109 INF: Y Motor: Start the move command
17-02-28 20:15:12.005 -08 000000109 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:12.013 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:15:12.066 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:15:12.066 -08 000000109 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:15:12.066 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:12.190 -08 000000109 INF: Y Motor: Unshifted Position: 1074031
17-02-28 20:15:12.240 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:12.366 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:12.503 -08 000000109 INF: Y Motor: Unshifted Position: 1772563
17-02-28 20:15:12.553 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:12.563 -08 000000057 INF: X Motor: Xmit PR ER\n
17-02-28 20:15:12.628 -08 000000057 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:15:12.628 -08 000000057 INF: X Motor: Moved to 19.9644 after 685 ms
17-02-28 20:15:12.628 -08 000000057 INF: ======================================
17-02-28 20:15:12.678 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:12.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:12.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 32 of 40 seconds left===================
17-02-28 20:15:12.814 -08 000000109 INF: Y Motor: Unshifted Position: 2548400
17-02-28 20:15:12.864 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:12.988 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:13.125 -08 000000109 INF: Y Motor: Unshifted Position: 3335845
17-02-28 20:15:13.175 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:13.302 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:13.438 -08 000000109 INF: Y Motor: Unshifted Position: 4109258
17-02-28 20:15:13.488 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:13.612 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:13.757 -08 000000109 INF: Y Motor: Unshifted Position: 4894189
17-02-28 20:15:13.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:13.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 31 of 40 seconds left===================
17-02-28 20:15:13.807 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:13.925 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:14.062 -08 000000109 INF: Y Motor: Unshifted Position: 5666497
17-02-28 20:15:14.112 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:14.238 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:14.373 -08 000000109 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:15:14.373 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:14.373 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:14.435 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:15:14.435 -08 000000109 INF: Y Motor: Moved to 64.4706 after 2369 ms
17-02-28 20:15:14.435 -08 000000109 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:14.500 -08 000000109 INF: Y Motor: Recv v 4096\r
17-02-28 20:15:14.500 -08 000000109 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:14.500 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:14.562 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:15:14.562 -08 000000109 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:14.562 -08 000000109 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:14.624 -08 000000109 INF: Y Motor: Recv v 402653184\r
17-02-28 20:15:14.624 -08 000000109 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:15:14.624 -08 000000109 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:14.624 -08 000000109 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:14.686 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:15:14.686 -08 000000109 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:14.686 -08 000000109 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:14.686 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:14.748 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:15:14.748 -08 000000109 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:14.748 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:14.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:14.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 30 of 40 seconds left===================
17-02-28 20:15:14.810 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:15:14.810 -08 000000109 INF: ======================================
17-02-28 20:15:14.812 -08 000000050 INF: ===================Move X,Y===================
17-02-28 20:15:14.813 -08 000000050 INF: ======================================
17-02-28 20:15:14.814 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:14.815 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:14.816 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:15:14.816 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:15:14.872 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:14.872 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:15:14.936 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:15:14.936 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:15:14.937 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:14.937 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:14.999 -08 000000092 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:15:14.999 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:15:14.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:15.000 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:15.001 -08 000000058 INF: ===================Set YMotor gains for scans===================
17-02-28 20:15:15.001 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:15:15.001 -08 000000058 INF: ======================================
17-02-28 20:15:15.002 -08 000000053 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:15:15.003 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:15:15.005 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:15:15.006 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:15:15.006 -08 000000053 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:15:15.057 -08 000000051 INF: FPGA: Recv TDIYPOS
17-02-28 20:15:15.057 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:15:15.060 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:15:15.060 -08 000000053 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:15:15.122 -08 000000038 INF: FPGA: Recv TDIYARM2
17-02-28 20:15:15.123 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:15:15.125 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:15:15.127 -08 000000053 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:15:15.127 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:15:15.130 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:15:15.130 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:15:15.131 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:15.500 -08 000000053 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:15:15.500 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:15:15.500 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:15.515 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:15:15.518 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:15.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:15.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 29 of 40 seconds left===================
17-02-28 20:15:15.904 -08 000000053 INF: Camera #2 AttachBuffer (imageDataPtr = 53821247560 imgPtr = 53895782648 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:15:15.904 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:15:15.904 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:15.920 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:15:15.922 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:15:15.923 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:15:15.926 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:15.927 -08 000000053 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:15:15.927 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:15.930 -08 000000053 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:15:15.930 -08 000000053 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:15:15.930 -08 000000053 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:15:15.930 -08 000000053 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:15:15.993 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:15:15.993 -08 000000053 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:15:15.993 -08 000000053 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:15:16.059 -08 000000051 INF: FPGA: Recv ZARM
17-02-28 20:15:16.059 -08 000000053 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.714 ms
17-02-28 20:15:16.059 -08 000000053 INF: Z Motor: ArmAbsStepped took 128.6973 ms
17-02-28 20:15:16.059 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:16.060 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:15:16.062 -08 000000053 INF: ======================================
17-02-28 20:15:16.063 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:16.064 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:16.064 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:16.064 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:16.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:16.066 -08 000000044 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:15:16.066 -08 000000057 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:15:16.066 -08 000000044 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:15:16.066 -08 000000044 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:15:16.066 -08 000000044 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:15:16.066 -08 000000057 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:15:16.066 -08 000000044 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:15:16.066 -08 000000057 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:15:16.066 -08 000000057 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:15:16.067 -08 000000057 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:15:16.493 -08 000000053 INF: FPGA: Recv EX2MV
17-02-28 20:15:16.493 -08 000000053 INF: FPGA: Recv EX1MV
17-02-28 20:15:16.493 -08 000000057 INF: Excitation Filter 1: Moved -107 steps in 426.1848 ms
17-02-28 20:15:16.493 -08 000000057 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 426.3422 ms
17-02-28 20:15:16.493 -08 000000044 INF: Excitation Filter 2: Moved -107 steps in 426.4339 ms
17-02-28 20:15:16.494 -08 000000057 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 426.4483 ms
17-02-28 20:15:16.494 -08 000000044 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 426.6099 ms
17-02-28 20:15:16.494 -08 000000044 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 426.7239 ms
17-02-28 20:15:16.494 -08 000000057 INF: ======================================
17-02-28 20:15:16.494 -08 000000044 INF: ======================================
17-02-28 20:15:16.496 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:16.497 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:16.498 -08 000000084 INF: ===================Serial===================
17-02-28 20:15:16.498 -08 000000092 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:16.499 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:15:16.499 -08 000000090 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:16.499 -08 000000084 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:15:16.499 -08 000000090 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:15:16.499 -08 000000084 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:15:16.499 -08 000000092 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:15:16.499 -08 000000090 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:16.499 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:16.500 -08 000000058 INF: ===================Camera TDI, Parallel===================
17-02-28 20:15:16.500 -08 000000092 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:15:16.500 -08 000000055 INF: ===================Camera TDI===================
17-02-28 20:15:16.501 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:15:16.502 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.502 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.502 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.502 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.560 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:16.560 -08 000000090 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:16.560 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:16.622 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:16.622 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:16.652 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.652 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.652 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.652 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.684 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:16.684 -08 000000090 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:16.684 -08 000000090 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:15:16.684 -08 000000090 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:15:16.746 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:16.746 -08 000000090 INF: Y Motor: Start the move command
17-02-28 20:15:16.746 -08 000000090 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:16.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:16.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 28 of 40 seconds left===================
17-02-28 20:15:16.802 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.802 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.802 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.802 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.808 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:16.808 -08 000000090 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:15:16.808 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:16.932 -08 000000090 INF: Y Motor: Unshifted Position: 5929035
17-02-28 20:15:16.952 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.952 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.952 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.952 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.982 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:17.102 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:15:17.102 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:15:17.102 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:15:17.102 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:15:17.102 -08 000000055 INF: ===================Camera #0 Frame #1===================
17-02-28 20:15:17.102 -08 000000037 INF: ===================Camera #2 Frame #1===================
17-02-28 20:15:17.107 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:17.245 -08 000000090 INF: Y Motor: Unshifted Position: 5881927
17-02-28 20:15:17.256 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:15:17.256 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:15:17.256 -08 000000055 INF: ===================Camera #0 Frame #3===================
17-02-28 20:15:17.257 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:15:17.257 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:15:17.257 -08 000000037 INF: ===================Camera #2 Frame #3===================
17-02-28 20:15:17.295 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:17.412 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:15:17.412 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:15:17.412 -08 000000055 INF: ===================Camera #0 Frame #4===================
17-02-28 20:15:17.413 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:15:17.413 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:15:17.413 -08 000000037 INF: ===================Camera #2 Frame #4===================
17-02-28 20:15:17.419 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:17.558 -08 000000090 INF: Y Motor: Unshifted Position: 5835078
17-02-28 20:15:17.565 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:17.565 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:17.565 -08 000000055 INF: ===================Camera #0 Frame #5===================
17-02-28 20:15:17.566 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:17.566 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:17.566 -08 000000037 INF: ===================Camera #2 Frame #5===================
17-02-28 20:15:17.608 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:17.618 -08 000000010 INF: FPGA: Recv ZWAIT 
17-02-28 20:15:17.618 -08 000000084 INF: ===================Serial===================
17-02-28 20:15:17.620 -08 000000084 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:15:17.620 -08 000000084 INF: ===================Serial===================
17-02-28 20:15:17.622 -08 000000084 INF: ======================================
17-02-28 20:15:17.680 -08 000000064 INF: FPGA: Recv TDIYWAIT
17-02-28 20:15:17.681 -08 000000092 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:17.683 -08 000000092 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:15:17.684 -08 000000057 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:15:17.684 -08 000000010 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:15:17.684 -08 000000057 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:15:17.684 -08 000000057 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:15:17.684 -08 000000057 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:15:17.684 -08 000000010 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:15:17.684 -08 000000057 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:15:17.684 -08 000000010 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:15:17.684 -08 000000010 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:15:17.685 -08 000000010 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:15:17.718 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:15:17.718 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:15:17.718 -08 000000055 INF: ===================Camera #0 Frame #6===================
17-02-28 20:15:17.719 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:15:17.719 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:15:17.719 -08 000000037 INF: ===================Camera #2 Frame #6===================
17-02-28 20:15:17.721 -08 000000055 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:15:17.722 -08 000000037 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:15:17.722 -08 000000055 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:17.723 -08 000000037 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:17.732 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:17.749 -08 000000037 INF: Camera #2 ReleaseBuffer
17-02-28 20:15:17.749 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:15:17.750 -08 000000037 INF: ======================================
17-02-28 20:15:17.777 -08 000000055 INF: Camera #0 ReleaseBuffer
17-02-28 20:15:17.777 -08 000000055 INF: ===================Camera TDI===================
17-02-28 20:15:17.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:17.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 27 of 40 seconds left===================
17-02-28 20:15:17.778 -08 000000055 INF: ======================================
17-02-28 20:15:17.780 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:15:17.781 -08 000000058 INF: ======================================
17-02-28 20:15:17.868 -08 000000090 INF: Y Motor: Unshifted Position: 5790761
17-02-28 20:15:17.918 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:18.054 -08 000000032 INF: FPGA: Recv EX1MV
17-02-28 20:15:18.054 -08 000000032 INF: FPGA: Recv EX2MV
17-02-28 20:15:18.054 -08 000000010 INF: Excitation Filter 2: Moved 107 steps in 369.9316 ms
17-02-28 20:15:18.054 -08 000000057 INF: Excitation Filter 1: Moved 107 steps in 370.1214 ms
17-02-28 20:15:18.054 -08 000000010 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.1229 ms
17-02-28 20:15:18.054 -08 000000010 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.2412 ms
17-02-28 20:15:18.054 -08 000000057 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.2647 ms
17-02-28 20:15:18.054 -08 000000057 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.435 ms
17-02-28 20:15:18.055 -08 000000010 INF: ======================================
17-02-28 20:15:18.055 -08 000000057 INF: ======================================
17-02-28 20:15:18.056 -08 000000090 INF: Y Motor: Unshifted Position: 5790745
17-02-28 20:15:18.056 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:18.056 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:18.056 -08 000000092 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:18.058 -08 000000092 INF: ======================================
17-02-28 20:15:18.119 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:18.119 -08 000000090 INF: Y Motor: Moved to 62.9075 after 1311 ms
17-02-28 20:15:18.119 -08 000000090 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:18.180 -08 000000090 INF: Y Motor: Recv v 4097\r
17-02-28 20:15:18.180 -08 000000090 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:18.180 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:18.245 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:18.245 -08 000000090 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:18.245 -08 000000090 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:18.307 -08 000000090 INF: Y Motor: Recv v 134217728\r
17-02-28 20:15:18.307 -08 000000090 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:15:18.307 -08 000000090 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:18.307 -08 000000090 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:18.369 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:18.369 -08 000000090 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:18.369 -08 000000090 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:18.369 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:18.431 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:18.431 -08 000000090 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:18.431 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:18.493 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:18.493 -08 000000090 INF: ======================================
17-02-28 20:15:18.494 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:18.496 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:18.496 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.497 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:15:18.554 -08 000000055 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:15:18.554 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:18.615 -08 000000029 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:15:18.615 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:15:18.679 -08 000000044 INF: FPGA: Recv ZADCR 2422
17-02-28 20:15:18.680 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:15:18.680 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:15:18.744 -08 000000010 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:15:18.745 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:15:18.745 -08 000000018 INF: TDIScan finished after 6981.1297 ms
17-02-28 20:15:18.745 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:15:18.745 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:15:18.745 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:15:18.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:18.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 26 of 40 seconds left===================
17-02-28 20:15:18.806 -08 000000109 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:15:18.807 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.808 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.809 -08 000000062 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:15:18.809 -08 000000104 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:15:18.809 -08 000000104 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:18.809 -08 000000104 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:18.809 -08 000000029 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:15:18.809 -08 000000062 INF: ======================================
17-02-28 20:15:18.810 -08 000000029 INF: ======================================
17-02-28 20:15:18.868 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:15:18.868 -08 000000104 INF: ======================================
17-02-28 20:15:18.869 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.870 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.871 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:15:18.912 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.913 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:15:18.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:15:19.021 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:19.021 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:15:19.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:19.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:19.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:19.066 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:15:19.074 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:19.074 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:15:19.074 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:15:19.703 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:15:19.726 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.060409642829983Best Z position at top surface = -0.132046439706963Best Z position at top surface + compensator offset = -0.109346439706963 C:3,L:6,T
17-02-28 20:15:19.728 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.132046439706963
17-02-28 20:15:19.728 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.77942
17-02-28 20:15:19.728 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.060409642829983
17-02-28 20:15:19.728 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.43441
17-02-28 20:15:19.728 -08 000000018 INF: Z-height at LaneTopSurface is -0.132046439706963.
17-02-28 20:15:19.728 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:19.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:19.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 25 of 40 seconds left===================
17-02-28 20:15:19.862 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:15:19.862 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:15:19.866 -08 000000037 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:19.867 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:19.868 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.868 -08 000000018 INF: Lane 6, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:15:19.869 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.869 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.870 -08 000000064 INF: ===================Move Tilt Motor 2===================
17-02-28 20:15:19.870 -08 000000109 INF: ===================Move Tilt Motor 3===================
17-02-28 20:15:19.870 -08 000000106 INF: ===================Move Tilt Motor 1===================
17-02-28 20:15:19.871 -08 000000106 INF: ======================================
17-02-28 20:15:19.871 -08 000000109 INF: ======================================
17-02-28 20:15:19.871 -08 000000064 INF: ======================================
17-02-28 20:15:19.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.873 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.874 -08 000000018 INF: ETF Best Z: -0.1093464 mm (28664 DAC)
17-02-28 20:15:19.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.875 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.875 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:15:19.875 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:15:20.309 -08 000000044 INF: FPGA: Recv MIOCOMPF
17-02-28 20:15:20.309 -08 000000018 INF: Compensator: Moved IntoPath in 434 ms
17-02-28 20:15:20.310 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:20.311 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:20.317 -08 000000018 INF: Swath 1 position calculated to be: {X=19.40993, Y=39.70011} from estimated center X= 19.887, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:15:20.317 -08 000000018 INF: Swath 2 position calculated to be: {X=20.51793, Y=39.70011} from estimated center X= 19.887, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:15:20.323 -08 000000018 INF: Swath 0: Converted transform from (50.73162, -19.93235) pixels to (0.017595, -0.0069) mm.
17-02-28 20:15:20.328 -08 000000018 INF: Swath 1: Converted transform from (25.25002, -15.87128) pixels to (0.008625, -0.00552) mm.
17-02-28 20:15:20.329 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011===================
17-02-28 20:15:20.329 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011===================
17-02-28 20:15:20.329 -08 000000018 INF: Transformed XStagePosition from 19.40993 mm to 19.4275242760777 mm.
17-02-28 20:15:20.341 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4832163330875 mm.
17-02-28 20:15:20.341 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2832163330875 mm.
17-02-28 20:15:20.341 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3739663330875 mm.
17-02-28 20:15:20.343 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:20.343 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:15:20.343 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:20.343 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = F_1
17-02-28 20:15:20.349 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:20.349 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:20.350 -08 000000066 INF: ===================MoveEmissionFilters===================
17-02-28 20:15:20.350 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:15:20.350 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:20.351 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:20.351 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:20.351 -08 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:20.351 -08 000000037 INF: ===================Move X,Y, Parallel===================
17-02-28 20:15:20.351 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:15:20.351 -08 000000030 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:20.352 -08 000000052 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:15:20.352 -08 000000052 INF: Z Motor: Moving to -0.1293 mm, started at -0.0100 mm
17-02-28 20:15:20.352 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:20.352 -08 000000052 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:15:20.352 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:20.352 -08 000000075 INF: ===================Move X Motor without settling===================
17-02-28 20:15:20.352 -08 000000068 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:20.352 -08 000000030 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:20.352 -08 000000075 INF: X Motor: Xmit PR VM\n
17-02-28 20:15:20.352 -08 000000068 INF: Y Motor: Moving to 64.4832 mm @25.000 mm/sec, started at 62.9075 mm
17-02-28 20:15:20.352 -08 000000068 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:20.352 -08 000000068 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:20.353 -08 000000057 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:15:20.353 -08 000000010 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:15:20.353 -08 000000045 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:15:20.353 -08 000000057 INF: ======================================
17-02-28 20:15:20.353 -08 000000050 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:15:20.353 -08 000000092 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:15:20.353 -08 000000010 INF: ======================================
17-02-28 20:15:20.354 -08 000000089 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:15:20.354 -08 000000050 INF: ======================================
17-02-28 20:15:20.354 -08 000000089 INF: ======================================
17-02-28 20:15:20.354 -08 000000092 INF: ======================================
17-02-28 20:15:20.355 -08 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:20.355 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:20.356 -08 000000076 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:15:20.356 -08 000000050 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:15:20.356 -08 000000030 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:20.356 -08 000000064 INF: ======================================
17-02-28 20:15:20.356 -08 000000045 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:15:20.356 -08 000000076 INF: ======================================
17-02-28 20:15:20.356 -08 000000050 INF: ======================================
17-02-28 20:15:20.357 -08 000000045 INF: ======================================
17-02-28 20:15:20.357 -08 000000030 INF: ======================================
17-02-28 20:15:20.357 -08 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:20.358 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:20.358 -08 000000029 INF: ======================================
17-02-28 20:15:20.359 -08 000000109 INF: ======================================
17-02-28 20:15:20.360 -08 000000066 INF: ======================================
17-02-28 20:15:20.424 -08 000000109 INF: FPGA: Recv ZTRG 
17-02-28 20:15:20.424 -08 000000052 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:15:20.426 -08 000000075 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:15:20.426 -08 000000075 INF: X Motor: Xmit PR VI\n
17-02-28 20:15:20.426 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:15:20.426 -08 000000068 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:20.426 -08 000000068 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:20.489 -08 000000074 INF: FPGA: Recv ZYT 
17-02-28 20:15:20.489 -08 000000052 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:15:20.489 -08 000000052 INF: FPGA: Xmit ZMV 33907\n
17-02-28 20:15:20.491 -08 000000075 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:15:20.491 -08 000000075 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:15:20.491 -08 000000075 INF: X Motor: Moving to 19.4275 mm @15.000 mm/sec, started at 19.9644 mm
17-02-28 20:15:20.491 -08 000000075 INF: X Motor: Xmit MA -16209\n
17-02-28 20:15:20.491 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:15:20.491 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:20.551 -08 000000062 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:15:20.551 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:15:20.553 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:15:20.553 -08 000000068 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:20.553 -08 000000075 INF: X Motor: Recv MA -16209\r\n>
17-02-28 20:15:20.553 -08 000000068 INF: Y Motor: Set target position to 5948322 encoder counts
17-02-28 20:15:20.553 -08 000000068 INF: Y Motor: Xmit s r0xca 5948322\r
17-02-28 20:15:20.553 -08 000000075 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:15:20.615 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:15:20.615 -08 000000068 INF: Y Motor: Start the move command
17-02-28 20:15:20.615 -08 000000068 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:20.675 -08 000000050 INF: FPGA: Recv ZMV 
17-02-28 20:15:20.675 -08 000000052 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.8929 ms
17-02-28 20:15:20.675 -08 000000052 INF: FPGA: Xmit ZDACR\n
17-02-28 20:15:20.677 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:15:20.677 -08 000000068 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:15:20.677 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:20.737 -08 000000038 INF: FPGA: Recv ZDACR 33907
17-02-28 20:15:20.737 -08 000000052 INF: Z Motor: MoveAndTrigger took 385.2253 ms w/comms
17-02-28 20:15:20.737 -08 000000052 INF: Z Motor: After move to -0.1293, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:15:20.737 -08 000000052 INF: Z Motor: MoveAbsStepped took 385.401 ms
17-02-28 20:15:20.737 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:20.739 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:15:20.740 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:15:20.740 -08 000000109 INF: ===================Camera Arm TDI===================
17-02-28 20:15:20.740 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:20.741 -08 000000109 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:20.741 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:15:20.741 -08 000000109 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:20.741 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:20.742 -08 000000089 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:15:20.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:20.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 24 of 40 seconds left===================
17-02-28 20:15:20.799 -08 000000064 INF: FPGA: Recv ZSEL 
17-02-28 20:15:20.800 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:20.800 -08 000000089 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:15:20.801 -08 000000068 INF: Y Motor: Unshifted Position: 5871807
17-02-28 20:15:20.851 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:20.863 -08 000000038 INF: FPGA: Recv TDIBB
17-02-28 20:15:20.864 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:20.865 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:15:20.865 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:20.867 -08 000000089 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:15:20.867 -08 000000089 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:15:20.867 -08 000000089 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:15:20.926 -08 000000050 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:20.926 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:20.928 -08 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:15:20.928 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:20.930 -08 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:15:20.930 -08 000000089 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:15:20.930 -08 000000089 INF: Z Motor: Arming to move to -0.0893 mm
17-02-28 20:15:20.930 -08 000000089 INF: FPGA: Xmit ZYT 6428322 4\n
17-02-28 20:15:20.978 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:20.988 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:15:20.988 -08 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6371807 enc / 63.718 mm / ) = 6428322 enc / 64.283 mm
17-02-28 20:15:20.988 -08 000000089 INF: FPGA: Xmit ZARM 23421\n
17-02-28 20:15:20.990 -08 000000075 INF: X Motor: Xmit PR ER\n
17-02-28 20:15:21.050 -08 000000057 INF: FPGA: Recv ZARM
17-02-28 20:15:21.050 -08 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9233 ms
17-02-28 20:15:21.050 -08 000000089 INF: Z Motor: ArmAbsStepped took 119.7485 ms
17-02-28 20:15:21.050 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:21.051 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:15:21.052 -08 000000075 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:15:21.052 -08 000000075 INF: X Motor: Moved to 19.4272 after 498 ms
17-02-28 20:15:21.052 -08 000000075 INF: ======================================
17-02-28 20:15:21.053 -08 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:15:21.053 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:15:21.055 -08 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:15:21.055 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:15:21.057 -08 000000089 INF: ======================================
17-02-28 20:15:21.114 -08 000000068 INF: Y Motor: Unshifted Position: 5948323
17-02-28 20:15:21.114 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:21.114 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:21.176 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:15:21.176 -08 000000068 INF: Y Motor: Moved to 64.4832 after 499 ms
17-02-28 20:15:21.176 -08 000000068 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:21.238 -08 000000068 INF: Y Motor: Recv v 4096\r
17-02-28 20:15:21.238 -08 000000068 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:21.238 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:21.300 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:15:21.300 -08 000000068 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:21.300 -08 000000068 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:21.364 -08 000000068 INF: Y Motor: Recv v 402653184\r
17-02-28 20:15:21.364 -08 000000068 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:15:21.364 -08 000000068 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:21.364 -08 000000068 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:21.426 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:15:21.426 -08 000000068 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:21.426 -08 000000068 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:21.426 -08 000000068 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:21.487 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:15:21.487 -08 000000068 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:21.487 -08 000000068 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:21.552 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:15:21.552 -08 000000068 INF: ======================================
17-02-28 20:15:21.553 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:15:21.554 -08 000000037 INF: ======================================
17-02-28 20:15:21.688 -08 000000109 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:15:21.688 -08 000000109 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:15:21.688 -08 000000109 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:21.704 -08 000000109 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:21.706 -08 000000109 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:21.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:21.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 23 of 40 seconds left===================
17-02-28 20:15:22.761 -08 000000109 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:15:22.761 -08 000000109 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:15:22.761 -08 000000109 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:22.776 -08 000000109 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:22.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:22.778 -08 000000109 INF: ===================Camera Arm TDI===================
17-02-28 20:15:22.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 22 of 40 seconds left===================
17-02-28 20:15:22.779 -08 000000109 INF: ======================================
17-02-28 20:15:22.780 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:22.781 -08 000000052 INF: ======================================
17-02-28 20:15:22.782 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:22.783 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:22.783 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:15:22.783 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:15:22.860 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:22.860 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:15:22.920 -08 000000098 INF: FPGA: Recv ZFREQCL
17-02-28 20:15:22.920 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:15:22.920 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:22.920 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:22.985 -08 000000095 INF: FPGA: Recv TDIYERD 6448323
17-02-28 20:15:22.985 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448323 counts (64.483 mm)
17-02-28 20:15:22.985 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:22.986 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:22.986 -08 000000038 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:22.986 -08 000000047 INF: ===================Set YMotor gains for scans===================
17-02-28 20:15:22.987 -08 000000047 INF: ======================================
17-02-28 20:15:22.987 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:22.988 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:15:22.988 -08 000000038 INF: FPGA: Xmit TDIYPOS 6337397\n
17-02-28 20:15:23.047 -08 000000068 INF: FPGA: Recv TDIYPOS
17-02-28 20:15:23.047 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:23.049 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:15:23.049 -08 000000038 INF: FPGA: Xmit TDIYARM3 139264 6428322 1 1\n
17-02-28 20:15:23.109 -08 000000075 INF: FPGA: Recv TDIYARM3
17-02-28 20:15:23.109 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:23.110 -08 000000038 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:23.111 -08 000000038 INF: ======================================
17-02-28 20:15:23.112 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:23.113 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:23.113 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:23.114 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:23.114 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:23.115 -08 000000101 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:15:23.115 -08 000000076 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:15:23.115 -08 000000101 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:15:23.115 -08 000000101 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:15:23.115 -08 000000101 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:15:23.115 -08 000000101 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:15:23.115 -08 000000076 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:15:23.115 -08 000000076 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:15:23.115 -08 000000076 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:15:23.116 -08 000000076 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:15:23.482 -08 000000104 INF: FPGA: Recv EX2MV
17-02-28 20:15:23.482 -08 000000104 INF: FPGA: Recv EX1MV
17-02-28 20:15:23.482 -08 000000076 INF: Excitation Filter 1: Moved -107 steps in 366.5212 ms
17-02-28 20:15:23.482 -08 000000076 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.6109 ms
17-02-28 20:15:23.482 -08 000000076 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.6915 ms
17-02-28 20:15:23.482 -08 000000101 INF: Excitation Filter 2: Moved -107 steps in 366.7409 ms
17-02-28 20:15:23.482 -08 000000101 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.9341 ms
17-02-28 20:15:23.482 -08 000000101 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.004 ms
17-02-28 20:15:23.482 -08 000000076 INF: ======================================
17-02-28 20:15:23.482 -08 000000101 INF: ======================================
17-02-28 20:15:23.483 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:23.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:23.485 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:15:23.485 -08 000000051 INF: ===================FPGA Z Wait===================
17-02-28 20:15:23.485 -08 000000050 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:23.486 -08 000000050 INF: Y Motor: Moving to 14.8349 mm @6.500 mm/sec, started at 64.4832 mm
17-02-28 20:15:23.486 -08 000000050 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:23.486 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:23.486 -08 000000051 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:15:23.486 -08 000000090 INF: ===================Camera TDI, Parallel===================
17-02-28 20:15:23.486 -08 000000075 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:23.487 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:15:23.487 -08 000000075 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:15:23.487 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:15:23.488 -08 000000075 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:15:23.489 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:23.489 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:23.489 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:23.489 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:23.546 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:15:23.546 -08 000000050 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:23.546 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:23.611 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:15:23.611 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:23.639 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:23.639 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:23.639 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:23.639 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:23.673 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:15:23.673 -08 000000050 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:23.673 -08 000000050 INF: Y Motor: Set target position to 983488 encoder counts
17-02-28 20:15:23.673 -08 000000050 INF: Y Motor: Xmit s r0xca 983488\r
17-02-28 20:15:23.735 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:15:23.735 -08 000000050 INF: Y Motor: Start the move command
17-02-28 20:15:23.735 -08 000000050 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:23.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:23.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 21 of 40 seconds left===================
17-02-28 20:15:23.789 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:23.789 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:23.789 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:23.789 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:23.797 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:15:23.797 -08 000000050 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:15:23.797 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:23.859 -08 000000084 INF: FPGA: Recv ZWAIT 
17-02-28 20:15:23.860 -08 000000051 INF: ======================================
17-02-28 20:15:23.921 -08 000000050 INF: Y Motor: Unshifted Position: 5885816
17-02-28 20:15:23.939 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:15:23.939 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:15:23.939 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:15:23.939 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:23.939 -08 000000068 INF: ===================Camera #0 Frame #4===================
17-02-28 20:15:23.939 -08 000000032 INF: ===================Camera #2 Frame #5===================
17-02-28 20:15:23.971 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.098 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.102 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:15:24.102 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:15:24.102 -08 000000068 INF: ===================Camera #0 Frame #10===================
17-02-28 20:15:24.107 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:24.107 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:24.107 -08 000000032 INF: ===================Camera #2 Frame #11===================
17-02-28 20:15:24.234 -08 000000050 INF: Y Motor: Unshifted Position: 5682802
17-02-28 20:15:24.272 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:24.272 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:24.272 -08 000000068 INF: ===================Camera #0 Frame #17===================
17-02-28 20:15:24.278 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:24.278 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:24.278 -08 000000032 INF: ===================Camera #2 Frame #17===================
17-02-28 20:15:24.284 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.407 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.446 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:15:24.446 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:15:24.446 -08 000000068 INF: ===================Camera #0 Frame #23===================
17-02-28 20:15:24.449 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:15:24.449 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:15:24.449 -08 000000032 INF: ===================Camera #2 Frame #23===================
17-02-28 20:15:24.546 -08 000000050 INF: Y Motor: Unshifted Position: 5479788
17-02-28 20:15:24.596 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.616 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:15:24.616 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:15:24.616 -08 000000068 INF: ===================Camera #0 Frame #29===================
17-02-28 20:15:24.620 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:15:24.620 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:15:24.620 -08 000000032 INF: ===================Camera #2 Frame #30===================
17-02-28 20:15:24.720 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:24.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 20 of 40 seconds left===================
17-02-28 20:15:24.786 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:15:24.786 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:15:24.786 -08 000000068 INF: ===================Camera #0 Frame #36===================
17-02-28 20:15:24.794 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:15:24.794 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:15:24.794 -08 000000032 INF: ===================Camera #2 Frame #36===================
17-02-28 20:15:24.859 -08 000000050 INF: Y Motor: Unshifted Position: 5278287
17-02-28 20:15:24.909 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.959 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:15:24.959 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:15:24.959 -08 000000068 INF: ===================Camera #0 Frame #42===================
17-02-28 20:15:24.965 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:15:24.965 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:15:24.965 -08 000000032 INF: ===================Camera #2 Frame #42===================
17-02-28 20:15:25.033 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.129 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:15:25.129 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:15:25.129 -08 000000068 INF: ===================Camera #0 Frame #48===================
17-02-28 20:15:25.136 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:15:25.136 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:15:25.136 -08 000000032 INF: ===================Camera #2 Frame #49===================
17-02-28 20:15:25.169 -08 000000050 INF: Y Motor: Unshifted Position: 5074619
17-02-28 20:15:25.219 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.299 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:15:25.299 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:15:25.299 -08 000000068 INF: ===================Camera #0 Frame #55===================
17-02-28 20:15:25.310 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:15:25.310 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:15:25.310 -08 000000032 INF: ===================Camera #2 Frame #55===================
17-02-28 20:15:25.343 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.473 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:15:25.473 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:15:25.473 -08 000000068 INF: ===================Camera #0 Frame #61===================
17-02-28 20:15:25.481 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:15:25.481 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:15:25.481 -08 000000032 INF: ===================Camera #2 Frame #61===================
17-02-28 20:15:25.485 -08 000000050 INF: Y Motor: Unshifted Position: 4872471
17-02-28 20:15:25.535 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.643 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:15:25.643 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:15:25.643 -08 000000068 INF: ===================Camera #0 Frame #67===================
17-02-28 20:15:25.651 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:15:25.651 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:15:25.651 -08 000000032 INF: ===================Camera #2 Frame #68===================
17-02-28 20:15:25.657 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:25.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 19 of 40 seconds left===================
17-02-28 20:15:25.795 -08 000000050 INF: Y Motor: Unshifted Position: 4669021
17-02-28 20:15:25.813 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:15:25.813 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:15:25.813 -08 000000068 INF: ===================Camera #0 Frame #73===================
17-02-28 20:15:25.825 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:15:25.825 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:15:25.825 -08 000000032 INF: ===================Camera #2 Frame #74===================
17-02-28 20:15:25.845 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.968 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.983 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:15:25.983 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:15:25.983 -08 000000068 INF: ===================Camera #0 Frame #80===================
17-02-28 20:15:25.996 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:15:25.996 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:15:25.996 -08 000000032 INF: ===================Camera #2 Frame #80===================
17-02-28 20:15:26.106 -08 000000050 INF: Y Motor: Unshifted Position: 4465342
17-02-28 20:15:26.156 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:26.157 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:15:26.157 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:15:26.157 -08 000000068 INF: ===================Camera #0 Frame #86===================
17-02-28 20:15:26.167 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:15:26.167 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:15:26.167 -08 000000032 INF: ===================Camera #2 Frame #87===================
17-02-28 20:15:26.281 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:26.327 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:15:26.327 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:15:26.327 -08 000000068 INF: ===================Camera #0 Frame #92===================
17-02-28 20:15:26.341 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:15:26.341 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:15:26.341 -08 000000032 INF: ===================Camera #2 Frame #93===================
17-02-28 20:15:26.418 -08 000000050 INF: Y Motor: Unshifted Position: 4263846
17-02-28 20:15:26.419 -08 000000084 INF: RunCopyService queue size at 2/28/2017 8:15:26 PM is 2
17-02-28 20:15:26.468 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:26.497 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:15:26.497 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:15:26.497 -08 000000068 INF: ===================Camera #0 Frame #99===================
17-02-28 20:15:26.512 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:15:26.512 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:15:26.512 -08 000000032 INF: ===================Camera #2 Frame #99===================
17-02-28 20:15:26.592 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:26.670 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:15:26.670 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:15:26.670 -08 000000068 INF: ===================Camera #0 Frame #105===================
17-02-28 20:15:26.683 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:15:26.683 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:15:26.683 -08 000000032 INF: ===================Camera #2 Frame #105===================
17-02-28 20:15:26.731 -08 000000050 INF: Y Motor: Unshifted Position: 4059520
17-02-28 20:15:26.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:26.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 18 of 40 seconds left===================
17-02-28 20:15:26.781 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:26.840 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:15:26.840 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:15:26.840 -08 000000068 INF: ===================Camera #0 Frame #111===================
17-02-28 20:15:26.854 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:15:26.854 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:15:26.854 -08 000000032 INF: ===================Camera #2 Frame #112===================
17-02-28 20:15:26.905 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.010 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:15:27.010 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:15:27.010 -08 000000068 INF: ===================Camera #0 Frame #118===================
17-02-28 20:15:27.028 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:15:27.028 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:15:27.028 -08 000000032 INF: ===================Camera #2 Frame #118===================
17-02-28 20:15:27.044 -08 000000050 INF: Y Motor: Unshifted Position: 3858024
17-02-28 20:15:27.094 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.183 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:15:27.183 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:15:27.183 -08 000000068 INF: ===================Camera #0 Frame #124===================
17-02-28 20:15:27.198 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:15:27.198 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:15:27.198 -08 000000032 INF: ===================Camera #2 Frame #124===================
17-02-28 20:15:27.218 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.353 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:15:27.353 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:15:27.353 -08 000000068 INF: ===================Camera #0 Frame #130===================
17-02-28 20:15:27.354 -08 000000050 INF: Y Motor: Unshifted Position: 3654359
17-02-28 20:15:27.369 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:15:27.369 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:15:27.369 -08 000000032 INF: ===================Camera #2 Frame #131===================
17-02-28 20:15:27.404 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.522 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:15:27.522 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:15:27.522 -08 000000068 INF: ===================Camera #0 Frame #136===================
17-02-28 20:15:27.528 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.543 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:15:27.543 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:15:27.543 -08 000000032 INF: ===================Camera #2 Frame #137===================
17-02-28 20:15:27.669 -08 000000050 INF: Y Motor: Unshifted Position: 3450902
17-02-28 20:15:27.692 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:15:27.692 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:15:27.692 -08 000000068 INF: ===================Camera #0 Frame #143===================
17-02-28 20:15:27.714 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:15:27.714 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:15:27.714 -08 000000032 INF: ===================Camera #2 Frame #143===================
17-02-28 20:15:27.719 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:27.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 17 of 40 seconds left===================
17-02-28 20:15:27.841 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.865 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:15:27.865 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:15:27.865 -08 000000068 INF: ===================Camera #0 Frame #149===================
17-02-28 20:15:27.885 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:15:27.885 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:15:27.885 -08 000000032 INF: ===================Camera #2 Frame #150===================
17-02-28 20:15:27.980 -08 000000050 INF: Y Motor: Unshifted Position: 3249190
17-02-28 20:15:28.030 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:28.035 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:15:28.035 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:15:28.035 -08 000000068 INF: ===================Camera #0 Frame #155===================
17-02-28 20:15:28.059 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:15:28.059 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:15:28.059 -08 000000032 INF: ===================Camera #2 Frame #156===================
17-02-28 20:15:28.154 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:28.205 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:15:28.205 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:15:28.205 -08 000000068 INF: ===================Camera #0 Frame #162===================
17-02-28 20:15:28.230 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:15:28.230 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:15:28.230 -08 000000032 INF: ===================Camera #2 Frame #162===================
17-02-28 20:15:28.290 -08 000000050 INF: Y Motor: Unshifted Position: 3045743
17-02-28 20:15:28.340 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:28.378 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:15:28.378 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:15:28.378 -08 000000068 INF: ===================Camera #0 Frame #168===================
17-02-28 20:15:28.401 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:15:28.401 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:15:28.401 -08 000000032 INF: ===================Camera #2 Frame #169===================
17-02-28 20:15:28.464 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:28.548 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:15:28.548 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:15:28.548 -08 000000068 INF: ===================Camera #0 Frame #174===================
17-02-28 20:15:28.575 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:15:28.575 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:15:28.575 -08 000000032 INF: ===================Camera #2 Frame #175===================
17-02-28 20:15:28.603 -08 000000050 INF: Y Motor: Unshifted Position: 2842081
17-02-28 20:15:28.653 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:28.718 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:15:28.718 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:15:28.718 -08 000000068 INF: ===================Camera #0 Frame #180===================
17-02-28 20:15:28.746 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:15:28.746 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:15:28.746 -08 000000032 INF: ===================Camera #2 Frame #181===================
17-02-28 20:15:28.777 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:28.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:28.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 16 of 40 seconds left===================
17-02-28 20:15:28.888 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:15:28.888 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:15:28.888 -08 000000068 INF: ===================Camera #0 Frame #187===================
17-02-28 20:15:28.914 -08 000000050 INF: Y Motor: Unshifted Position: 2640365
17-02-28 20:15:28.917 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:15:28.917 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:15:28.917 -08 000000032 INF: ===================Camera #2 Frame #188===================
17-02-28 20:15:28.964 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.061 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:15:29.061 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:15:29.061 -08 000000068 INF: ===================Camera #0 Frame #193===================
17-02-28 20:15:29.090 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.091 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:15:29.091 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:15:29.091 -08 000000032 INF: ===================Camera #2 Frame #194===================
17-02-28 20:15:29.227 -08 000000050 INF: Y Motor: Unshifted Position: 2436276
17-02-28 20:15:29.231 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:15:29.231 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:15:29.231 -08 000000068 INF: ===================Camera #0 Frame #199===================
17-02-28 20:15:29.262 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:15:29.262 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:15:29.262 -08 000000032 INF: ===================Camera #2 Frame #200===================
17-02-28 20:15:29.277 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.401 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.401 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:15:29.401 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:15:29.401 -08 000000068 INF: ===================Camera #0 Frame #206===================
17-02-28 20:15:29.433 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:15:29.433 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:15:29.433 -08 000000032 INF: ===================Camera #2 Frame #207===================
17-02-28 20:15:29.537 -08 000000050 INF: Y Motor: Unshifted Position: 2234555
17-02-28 20:15:29.574 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:15:29.574 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:15:29.574 -08 000000068 INF: ===================Camera #0 Frame #212===================
17-02-28 20:15:29.587 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.608 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:15:29.608 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:15:29.608 -08 000000032 INF: ===================Camera #2 Frame #213===================
17-02-28 20:15:29.712 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.744 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:15:29.744 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:15:29.744 -08 000000068 INF: ===================Camera #0 Frame #218===================
17-02-28 20:15:29.779 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:15:29.779 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:15:29.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:29.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 15 of 40 seconds left===================
17-02-28 20:15:29.779 -08 000000032 INF: ===================Camera #2 Frame #219===================
17-02-28 20:15:29.851 -08 000000050 INF: Y Motor: Unshifted Position: 2030450
17-02-28 20:15:29.901 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.914 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:15:29.914 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:15:29.914 -08 000000068 INF: ===================Camera #0 Frame #224===================
17-02-28 20:15:29.950 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:15:29.950 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:15:29.950 -08 000000032 INF: ===================Camera #2 Frame #226===================
17-02-28 20:15:30.025 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.084 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:15:30.084 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:15:30.084 -08 000000068 INF: ===================Camera #0 Frame #231===================
17-02-28 20:15:30.125 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:15:30.125 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:15:30.125 -08 000000032 INF: ===================Camera #2 Frame #232===================
17-02-28 20:15:30.161 -08 000000050 INF: Y Motor: Unshifted Position: 1828948
17-02-28 20:15:30.211 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.257 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:15:30.257 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:15:30.257 -08 000000068 INF: ===================Camera #0 Frame #237===================
17-02-28 20:15:30.296 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:15:30.296 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:15:30.296 -08 000000032 INF: ===================Camera #2 Frame #239===================
17-02-28 20:15:30.336 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.427 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:15:30.427 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:15:30.427 -08 000000068 INF: ===================Camera #0 Frame #243===================
17-02-28 20:15:30.471 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:15:30.471 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:15:30.471 -08 000000032 INF: ===================Camera #2 Frame #245===================
17-02-28 20:15:30.473 -08 000000050 INF: Y Motor: Unshifted Position: 1623340
17-02-28 20:15:30.523 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.597 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:15:30.597 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:15:30.597 -08 000000068 INF: ===================Camera #0 Frame #250===================
17-02-28 20:15:30.641 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:15:30.641 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:15:30.641 -08 000000032 INF: ===================Camera #2 Frame #251===================
17-02-28 20:15:30.648 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.770 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:15:30.770 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:15:30.770 -08 000000068 INF: ===================Camera #0 Frame #256===================
17-02-28 20:15:30.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:30.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 14 of 40 seconds left===================
17-02-28 20:15:30.787 -08 000000050 INF: Y Motor: Unshifted Position: 1421607
17-02-28 20:15:30.812 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:15:30.812 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:15:30.812 -08 000000032 INF: ===================Camera #2 Frame #258===================
17-02-28 20:15:30.837 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.939 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:15:30.939 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:15:30.939 -08 000000068 INF: ===================Camera #0 Frame #262===================
17-02-28 20:15:30.961 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.987 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:15:30.987 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:15:30.987 -08 000000032 INF: ===================Camera #2 Frame #264===================
17-02-28 20:15:31.097 -08 000000050 INF: Y Motor: Unshifted Position: 1220108
17-02-28 20:15:31.109 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:15:31.109 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:15:31.109 -08 000000068 INF: ===================Camera #0 Frame #268===================
17-02-28 20:15:31.147 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:31.158 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:15:31.158 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:15:31.158 -08 000000032 INF: ===================Camera #2 Frame #270===================
17-02-28 20:15:31.220 -08 000000104 INF: FPGA: Recv TDIYWAIT
17-02-28 20:15:31.221 -08 000000075 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:31.222 -08 000000075 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:15:31.223 -08 000000028 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:15:31.223 -08 000000095 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:15:31.223 -08 000000028 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:15:31.223 -08 000000028 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:15:31.223 -08 000000028 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:15:31.223 -08 000000095 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:15:31.223 -08 000000095 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:15:31.223 -08 000000095 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:15:31.223 -08 000000028 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:15:31.226 -08 000000095 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:15:31.272 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:31.279 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:15:31.279 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:15:31.279 -08 000000068 INF: ===================Camera #0 Frame #272===================
17-02-28 20:15:31.292 -08 000000068 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:15:31.293 -08 000000068 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:31.411 -08 000000050 INF: Y Motor: Unshifted Position: 1016012
17-02-28 20:15:31.458 -08 000000068 INF: Camera #0 ReleaseBuffer
17-02-28 20:15:31.458 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:15:31.458 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:15:31.458 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:15:31.458 -08 000000032 INF: ===================Camera #2 Frame #272===================
17-02-28 20:15:31.461 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:31.465 -08 000000032 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:15:31.466 -08 000000032 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:31.492 -08 000000068 INF: ======================================
17-02-28 20:15:31.597 -08 000000076 INF: FPGA: Recv EX1MV
17-02-28 20:15:31.597 -08 000000076 INF: FPGA: Recv EX2MV
17-02-28 20:15:31.597 -08 000000095 INF: Excitation Filter 2: Moved 107 steps in 373.4501 ms
17-02-28 20:15:31.597 -08 000000028 INF: Excitation Filter 1: Moved 107 steps in 373.6204 ms
17-02-28 20:15:31.597 -08 000000028 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.7409 ms
17-02-28 20:15:31.597 -08 000000028 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.8234 ms
17-02-28 20:15:31.597 -08 000000095 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.5828 ms
17-02-28 20:15:31.597 -08 000000095 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.9576 ms
17-02-28 20:15:31.598 -08 000000028 INF: ======================================
17-02-28 20:15:31.598 -08 000000095 INF: ======================================
17-02-28 20:15:31.599 -08 000000075 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:31.600 -08 000000050 INF: Y Motor: Unshifted Position: 983488
17-02-28 20:15:31.600 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:31.600 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:31.600 -08 000000075 INF: ======================================
17-02-28 20:15:31.661 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:15:31.661 -08 000000050 INF: Y Motor: Moved to 14.8349 after 7863 ms
17-02-28 20:15:31.661 -08 000000050 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:31.665 -08 000000032 INF: Camera #2 ReleaseBuffer
17-02-28 20:15:31.665 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:15:31.700 -08 000000032 INF: ======================================
17-02-28 20:15:31.701 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:15:31.702 -08 000000090 INF: ======================================
17-02-28 20:15:31.723 -08 000000050 INF: Y Motor: Recv v 4097\r
17-02-28 20:15:31.723 -08 000000050 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:31.723 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:31.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:31.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 13 of 40 seconds left===================
17-02-28 20:15:31.785 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:15:31.785 -08 000000050 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:31.785 -08 000000050 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:31.847 -08 000000050 INF: Y Motor: Recv v 134217728\r
17-02-28 20:15:31.847 -08 000000050 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:15:31.847 -08 000000050 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:31.847 -08 000000050 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:31.909 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:15:31.909 -08 000000050 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:31.909 -08 000000050 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:31.909 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:31.971 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:15:31.971 -08 000000050 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:31.971 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:32.033 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:15:32.034 -08 000000050 INF: ======================================
17-02-28 20:15:32.035 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:32.036 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:32.037 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.037 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:15:32.097 -08 000000032 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:15:32.097 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:32.156 -08 000000068 INF: FPGA: Recv TDIYERD 1483488
17-02-28 20:15:32.156 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:15:32.219 -08 000000038 INF: FPGA: Recv ZADCR 33441
17-02-28 20:15:32.219 -08 000000018 INF: At scan end Y pos = 14.835 and Z pos = -0.128. Y moved -48.539 mm
17-02-28 20:15:32.219 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:15:32.281 -08 000000064 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:15:32.281 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:15:32.281 -08 000000018 INF: TDIScan finished after 11951.0609 ms
17-02-28 20:15:32.281 -08 000000018 INF: Image[0]: Y should trigger at 63.374 mm, 2nd row was at 64.283 mm (error = 0.909 mm)
17-02-28 20:15:32.281 -08 000000018 INF: Image[2]: Y should trigger at 63.374 mm, 2nd row was at 64.283 mm (error = 0.909 mm)
17-02-28 20:15:32.283 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.315 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.810 um
17-02-28 20:15:32.316 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.316 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:15:32.343 -08 000000089 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:15:32.343 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.344 -08 000000076 INF: ===================Dither Clean Up Command===================
17-02-28 20:15:32.344 -08 000000037 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:15:32.344 -08 000000066 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:15:32.344 -08 000000064 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:15:32.345 -08 000000064 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:15:32.345 -08 000000064 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:15:32.345 -08 000000037 INF: ======================================
17-02-28 20:15:32.345 -08 000000066 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:32.345 -08 000000066 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:32.345 -08 000000098 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:15:32.345 -08 000000074 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:32.346 -08 000000098 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:15:32.349 -08 000000074 INF: ===================LFT:Extracting coords===================
17-02-28 20:15:32.377 -08 000000074 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:32.378 -08 000000074 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:15:32.379 -08 000000045 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.379 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.379 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.379 -08 000000045 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:32.379 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.379 -08 000000046 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:32.380 -08 000000050 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:32.380 -08 000000085 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:32.409 -08 000000028 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:32.409 -08 000000028 INF: FPGA: Recv ZSEL 
17-02-28 20:15:32.409 -08 000000098 INF: FPGA: Xmit ZDACW 33907\n
17-02-28 20:15:32.409 -08 000000064 INF: ======================================
17-02-28 20:15:32.411 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:32.411 -08 000000066 INF: ======================================
17-02-28 20:15:32.455 -08 000000046 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:32.455 -08 000000050 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:32.456 -08 000000045 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:32.465 -08 000000085 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:32.471 -08 000000109 INF: FPGA: Recv ZDACW 
17-02-28 20:15:32.471 -08 000000098 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:15:32.471 -08 000000098 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:15:32.530 -08 000000051 INF: FPGA: Recv TDIBB
17-02-28 20:15:32.530 -08 000000098 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:15:32.531 -08 000000098 INF: ======================================
17-02-28 20:15:32.607 -08 000000046 INF: LFT found best fwhm score 2.000104 in 152 ms
17-02-28 20:15:32.607 -08 000000046 INF: LFT found good score at index 2941 with fwhm value 2.000104. Next cycle, cycle 4 starting Z position for top surface is at -0.131 mm FC:A, C:3,L:6,T
17-02-28 20:15:32.607 -08 000000050 INF: LFT found best fwhm score 2.000261 in 152 ms
17-02-28 20:15:32.608 -08 000000050 INF: LFT found good score at index 4861 with fwhm value 2.000261. Next cycle, cycle 4 starting Z position for top surface is at -0.131 mm FC:A, C:3,L:6,T
17-02-28 20:15:32.608 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.608 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.608 -08 000000046 INF: ======================================
17-02-28 20:15:32.608 -08 000000050 INF: ======================================
17-02-28 20:15:32.608 -08 000000045 INF: LFT found best fwhm score 2.000585 in 152 ms
17-02-28 20:15:32.608 -08 000000045 INF: LFT found good score at index 8861 with fwhm value 2.000585. Next cycle, cycle 4 starting Z position for top surface is at -0.131 mm FC:A, C:3,L:6,T
17-02-28 20:15:32.608 -08 000000045 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.609 -08 000000045 INF: ======================================
17-02-28 20:15:32.636 -08 000000085 INF: LFT found best fwhm score 2.20749 in 171 ms
17-02-28 20:15:32.636 -08 000000085 INF: LFT found good score at index 7057 with fwhm value 2.20749. Next cycle, cycle 4 starting Z position for top surface is at -0.131 mm FC:A, C:3,L:6,T
17-02-28 20:15:32.637 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.637 -08 000000085 INF: ======================================
17-02-28 20:15:32.638 -08 000000074 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:32.639 -08 000000074 INF: LFT weighted average best Z for top surface is at -0.131mm FC:A, C:3,L:6,T
17-02-28 20:15:32.639 -08 000000074 INF: ======================================
17-02-28 20:15:32.641 -08 000000076 INF: ======================================
17-02-28 20:15:32.642 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.642 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011===================
17-02-28 20:15:32.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011===================
17-02-28 20:15:32.645 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:15:32.645 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011===================
17-02-28 20:15:32.645 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 13 of 40 seconds left, Waiting for image analysis===================
17-02-28 20:15:32.645 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 13 of 40 seconds left===================
17-02-28 20:15:32.668 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:15:32.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:32.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011===================
17-02-28 20:15:32.668 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:32.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011===================
17-02-28 20:15:32.669 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:15:32.669 -08 000000018 INF: Transformed XStagePosition from 20.51793 mm to 20.5265540769324 mm.
17-02-28 20:15:32.740 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4845963328853 mm.
17-02-28 20:15:32.740 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2845963328853 mm.
17-02-28 20:15:32.740 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3753463328853 mm.
17-02-28 20:15:32.741 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":6,"Tile":1107,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF246","HCSMMF185","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.745 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.745 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:15:32.745 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.746 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -129.3 um, section = F_1
17-02-28 20:15:32.749 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:32.751 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:32.752 -08 000000028 INF: ===================MoveEmissionFilters===================
17-02-28 20:15:32.752 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:15:32.753 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:32.753 -08 000000075 INF: ===================Move X,Y, Parallel===================
17-02-28 20:15:32.754 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:15:32.754 -08 000000071 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:15:32.754 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:32.755 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:32.756 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:15:32.756 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:32.758 -08 000000082 INF: ===================Move X Motor without settling===================
17-02-28 20:15:32.758 -08 000000082 INF: X Motor: Xmit PR VM\n
17-02-28 20:15:32.761 -08 000000099 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:32.761 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:15:32.761 -08 000000099 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:32.762 -08 000000095 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:15:32.762 -08 000000052 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:32.762 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:32.762 -08 000000052 INF: Y Motor: Moving to 64.4846 mm @25.000 mm/sec, started at 14.8349 mm
17-02-28 20:15:32.762 -08 000000095 INF: ======================================
17-02-28 20:15:32.762 -08 000000052 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:32.763 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:32.763 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:32.763 -08 000000058 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:15:32.763 -08 000000058 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:32.764 -08 000000058 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:15:32.764 -08 000000095 INF: ===================Camera Arm TDI===================
17-02-28 20:15:32.764 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:32.764 -08 000000079 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:15:32.765 -08 000000079 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:15:32.765 -08 000000095 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:32.765 -08 000000079 INF: ======================================
17-02-28 20:15:32.766 -08 000000095 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:32.766 -08 000000098 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:32.767 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:32.767 -08 000000079 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:15:32.767 -08 000000079 INF: ======================================
17-02-28 20:15:32.768 -08 000000010 INF: ======================================
17-02-28 20:15:32.769 -08 000000098 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:32.770 -08 000000079 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:15:32.770 -08 000000079 INF: ======================================
17-02-28 20:15:32.770 -08 000000064 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:15:32.771 -08 000000010 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:15:32.771 -08 000000064 INF: ======================================
17-02-28 20:15:32.772 -08 000000010 INF: ======================================
17-02-28 20:15:32.772 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:32.772 -08 000000079 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:15:32.772 -08 000000079 INF: ======================================
17-02-28 20:15:32.773 -08 000000064 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:15:32.773 -08 000000064 INF: ======================================
17-02-28 20:15:32.773 -08 000000025 INF: ======================================
17-02-28 20:15:32.774 -08 000000098 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:32.775 -08 000000099 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:32.776 -08 000000098 INF: ======================================
17-02-28 20:15:32.776 -08 000000099 INF: ======================================
17-02-28 20:15:32.778 -08 000000028 INF: ======================================
17-02-28 20:15:32.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:32.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 12 of 40 seconds left===================
17-02-28 20:15:32.811 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":6,"Tile":1103,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF233","HCSMMF237","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.812 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":6,"Tile":1102,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF230","HCSMMF250","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.812 -08 000000028 INF: FPGA: Recv ZSEL 
17-02-28 20:15:32.814 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:15:32.814 -08 000000052 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:32.814 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:32.814 -08 000000058 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:32.814 -08 000000058 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:15:32.821 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":6,"Tile":1104,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF267","HCSMMF242","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.822 -08 000000082 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:15:32.822 -08 000000082 INF: X Motor: Xmit PR VI\n
17-02-28 20:15:32.824 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":6,"Tile":1101,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF212","HCSMMF192","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.825 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":6,"Tile":1110,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF231","HCSMMF262","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.874 -08 000000028 INF: FPGA: Recv TDIBB
17-02-28 20:15:32.874 -08 000000058 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:32.876 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:15:32.876 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:32.876 -08 000000082 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:15:32.876 -08 000000058 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:15:32.876 -08 000000082 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:15:32.876 -08 000000082 INF: X Motor: Moving to 20.5266 mm @15.000 mm/sec, started at 19.4272 mm
17-02-28 20:15:32.876 -08 000000082 INF: X Motor: Xmit MA -15759\n
17-02-28 20:15:32.876 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:32.878 -08 000000058 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:15:32.878 -08 000000058 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:15:32.878 -08 000000058 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:15:32.885 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":6,"Tile":1106,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF177","HCSMMF266","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.886 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":6,"Tile":1108,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF251","HCSMMF228","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.886 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":6,"Tile":1111,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF227","HCSMMF259","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.887 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":6,"Tile":1105,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF203","HCSMMF279","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.888 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":6,"Tile":1112,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF247","HCSMMF260","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.888 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":6,"Tile":1113,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF207","HCSMMF190","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.889 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":6,"Tile":1109,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF215","HCSMMF198","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.890 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":6,"Tile":1116,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF286","HCSMMF204","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.891 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":6,"Tile":1119,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF264","HCSMMF214","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.892 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":6,"Tile":1114,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF208","HCSMMF199","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.892 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":6,"Tile":1115,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF194","HCSMMF221","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.893 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":6,"Tile":1120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF285","HCSMMF273","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.894 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":6,"Tile":1121,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF224","HCSMMF217","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.895 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":6,"Tile":1118,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF283","HCSMMF234","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.895 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":6,"Tile":1117,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF277","HCSMMF178","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.896 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":6,"Tile":1123,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF206","HCSMMF193","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.897 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":6,"Tile":1127,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF209","HCSMMF258","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.898 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":6,"Tile":1124,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF272","HCSMMF211","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.899 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":6,"Tile":1128,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF186","HCSMMF235","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.900 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":6,"Tile":1125,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF284","HCSMMF232","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.900 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":6,"Tile":1126,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF256","HCSMMF255","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.903 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":6,"Tile":1122,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF280","HCSMMF269","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.910 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:32.916 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:15:32.936 -08 000000084 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:32.936 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:32.938 -08 000000082 INF: X Motor: Recv MA -15759\r\n>
17-02-28 20:15:32.938 -08 000000082 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:15:32.938 -08 000000058 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:15:32.938 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:32.940 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:15:32.940 -08 000000052 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:32.940 -08 000000052 INF: Y Motor: Set target position to 5948460 encoder counts
17-02-28 20:15:32.940 -08 000000052 INF: Y Motor: Xmit s r0xca 5948460\r
17-02-28 20:15:32.940 -08 000000058 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:15:32.940 -08 000000058 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:15:32.940 -08 000000058 INF: Z Motor: Arming to move to -0.0893 mm
17-02-28 20:15:32.940 -08 000000058 INF: FPGA: Xmit ZYT 6428460 4\n
17-02-28 20:15:32.998 -08 000000038 INF: FPGA: Recv ZYT 
17-02-28 20:15:32.998 -08 000000058 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1483488 enc / 14.835 mm / ) = 6428460 enc / 64.285 mm
17-02-28 20:15:32.998 -08 000000058 INF: FPGA: Xmit ZARM 23421\n
17-02-28 20:15:33.000 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:15:33.000 -08 000000052 INF: Y Motor: Start the move command
17-02-28 20:15:33.000 -08 000000052 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:33.020 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:33.020 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:15:33.058 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:33.063 -08 000000028 INF: FPGA: Recv ZARM
17-02-28 20:15:33.063 -08 000000058 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.5731 ms
17-02-28 20:15:33.063 -08 000000058 INF: Z Motor: ArmAbsStepped took 122.691 ms
17-02-28 20:15:33.063 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:33.064 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:15:33.065 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:15:33.065 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:15:33.065 -08 000000052 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:15:33.065 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:33.066 -08 000000058 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:15:33.067 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:15:33.068 -08 000000058 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:15:33.068 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:15:33.070 -08 000000058 INF: ======================================
17-02-28 20:15:33.163 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:33.169 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:15:33.189 -08 000000052 INF: Y Motor: Unshifted Position: 1070694
17-02-28 20:15:33.239 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:33.263 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:33.269 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:15:33.365 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:33.367 -08 000000095 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:15:33.367 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:15:33.367 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:33.380 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:33.382 -08 000000095 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:33.384 -08 000000095 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:33.500 -08 000000052 INF: Y Motor: Unshifted Position: 1773492
17-02-28 20:15:33.550 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:33.562 -08 000000082 INF: X Motor: Xmit PR ER\n
17-02-28 20:15:33.624 -08 000000082 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:15:33.624 -08 000000082 INF: X Motor: Moved to 20.5259 after 686 ms
17-02-28 20:15:33.624 -08 000000082 INF: ======================================
17-02-28 20:15:33.658 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:15:33.674 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:33.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:33.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 11 of 40 seconds left===================
17-02-28 20:15:33.813 -08 000000052 INF: Y Motor: Unshifted Position: 2577674
17-02-28 20:15:33.863 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:33.984 -08 000000095 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:15:33.984 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:15:33.984 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:34.000 -08 000000095 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:34.002 -08 000000095 INF: ===================Camera Arm TDI===================
17-02-28 20:15:34.003 -08 000000095 INF: ======================================
17-02-28 20:15:34.004 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:34.006 -08 000000071 INF: ======================================
17-02-28 20:15:34.029 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:34.157 -08 000000052 INF: Y Motor: Unshifted Position: 3411809
17-02-28 20:15:34.207 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:34.331 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:34.468 -08 000000052 INF: Y Motor: Unshifted Position: 4195120
17-02-28 20:15:34.518 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:34.645 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:34.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:34.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 10 of 40 seconds left===================
17-02-28 20:15:34.783 -08 000000052 INF: Y Motor: Unshifted Position: 4975193
17-02-28 20:15:34.833 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:34.955 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:35.091 -08 000000052 INF: Y Motor: Unshifted Position: 5743893
17-02-28 20:15:35.141 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:35.270 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:35.405 -08 000000052 INF: Y Motor: Unshifted Position: 5948461
17-02-28 20:15:35.405 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:35.405 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:35.468 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:15:35.468 -08 000000052 INF: Y Motor: Moved to 64.4846 after 2403 ms
17-02-28 20:15:35.468 -08 000000052 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:35.528 -08 000000052 INF: Y Motor: Recv v 4096\r
17-02-28 20:15:35.528 -08 000000052 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:35.528 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:35.592 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:15:35.592 -08 000000052 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:35.592 -08 000000052 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:35.652 -08 000000052 INF: Y Motor: Recv v 402653184\r
17-02-28 20:15:35.652 -08 000000052 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:15:35.652 -08 000000052 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:35.652 -08 000000052 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:35.717 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:15:35.717 -08 000000052 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:35.717 -08 000000052 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:35.717 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:35.779 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:15:35.779 -08 000000052 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:35.779 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:35.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:35.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 9 of 40 seconds left===================
17-02-28 20:15:35.841 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:15:35.841 -08 000000052 INF: ======================================
17-02-28 20:15:35.842 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:15:35.843 -08 000000075 INF: ======================================
17-02-28 20:15:35.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:35.845 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:35.845 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:15:35.845 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:15:35.903 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:35.903 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:15:35.963 -08 000000037 INF: FPGA: Recv ZFREQCL
17-02-28 20:15:35.963 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:15:35.963 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:35.964 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:36.025 -08 000000066 INF: FPGA: Recv TDIYERD 6448461
17-02-28 20:15:36.025 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448461 counts (64.485 mm)
17-02-28 20:15:36.026 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:36.026 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:36.027 -08 000000044 INF: ===================Set YMotor gains for scans===================
17-02-28 20:15:36.027 -08 000000079 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:36.027 -08 000000044 INF: ======================================
17-02-28 20:15:36.028 -08 000000079 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:36.028 -08 000000079 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:15:36.029 -08 000000079 INF: FPGA: Xmit TDIYPOS 6337535\n
17-02-28 20:15:36.087 -08 000000099 INF: FPGA: Recv TDIYPOS
17-02-28 20:15:36.087 -08 000000079 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:36.089 -08 000000079 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:15:36.089 -08 000000079 INF: FPGA: Xmit TDIYARM3 139264 6428460 1 1\n
17-02-28 20:15:36.150 -08 000000010 INF: FPGA: Recv TDIYARM3
17-02-28 20:15:36.150 -08 000000079 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:36.151 -08 000000079 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:36.152 -08 000000079 INF: ======================================
17-02-28 20:15:36.154 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:36.154 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:36.155 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:36.155 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:36.156 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:36.156 -08 000000030 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:15:36.156 -08 000000046 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:15:36.157 -08 000000030 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:15:36.157 -08 000000030 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:15:36.157 -08 000000030 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:15:36.157 -08 000000046 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:15:36.157 -08 000000030 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:15:36.157 -08 000000046 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:15:36.157 -08 000000046 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:15:36.158 -08 000000046 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:15:36.525 -08 000000047 INF: FPGA: Recv EX2MV
17-02-28 20:15:36.525 -08 000000047 INF: FPGA: Recv EX1MV
17-02-28 20:15:36.525 -08 000000046 INF: Excitation Filter 1: Moved -107 steps in 367.2226 ms
17-02-28 20:15:36.525 -08 000000030 INF: Excitation Filter 2: Moved -107 steps in 367.3978 ms
17-02-28 20:15:36.525 -08 000000030 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.6168 ms
17-02-28 20:15:36.525 -08 000000030 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.7104 ms
17-02-28 20:15:36.525 -08 000000046 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.4431 ms
17-02-28 20:15:36.525 -08 000000046 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.8537 ms
17-02-28 20:15:36.526 -08 000000030 INF: ======================================
17-02-28 20:15:36.526 -08 000000046 INF: ======================================
17-02-28 20:15:36.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:36.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:36.529 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:36.529 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:15:36.529 -08 000000082 INF: ===================FPGA Z Wait===================
17-02-28 20:15:36.529 -08 000000066 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:36.529 -08 000000082 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:15:36.529 -08 000000066 INF: Y Motor: Moving to 14.8363 mm @6.500 mm/sec, started at 64.4846 mm
17-02-28 20:15:36.530 -08 000000066 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:36.530 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:36.530 -08 000000045 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:15:36.530 -08 000000025 INF: ===================Camera TDI, Parallel===================
17-02-28 20:15:36.530 -08 000000045 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:15:36.531 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:15:36.531 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:15:36.532 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:36.532 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:36.533 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:36.533 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:36.589 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:36.589 -08 000000066 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:36.589 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:36.654 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:36.654 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:36.683 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:36.683 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:36.683 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:36.683 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:36.716 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:15:36.716 -08 000000066 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:36.716 -08 000000066 INF: Y Motor: Set target position to 983626 encoder counts
17-02-28 20:15:36.716 -08 000000066 INF: Y Motor: Xmit s r0xca 983626\r
17-02-28 20:15:36.778 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:36.778 -08 000000066 INF: Y Motor: Start the move command
17-02-28 20:15:36.778 -08 000000066 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:36.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:36.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 8 of 40 seconds left===================
17-02-28 20:15:36.833 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:36.833 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:36.833 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:36.833 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:36.862 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:36.862 -08 000000066 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:15:36.862 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:36.915 -08 000000064 INF: FPGA: Recv ZWAIT 
17-02-28 20:15:36.916 -08 000000082 INF: ======================================
17-02-28 20:15:36.979 -08 000000066 INF: Y Motor: Unshifted Position: 5876852
17-02-28 20:15:36.983 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:36.983 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:36.983 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:36.983 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:36.983 -08 000000106 INF: ===================Camera #2 Frame #5===================
17-02-28 20:15:36.983 -08 000000037 INF: ===================Camera #0 Frame #5===================
17-02-28 20:15:37.029 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:37.149 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:37.149 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:37.149 -08 000000106 INF: ===================Camera #2 Frame #11===================
17-02-28 20:15:37.156 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:37.156 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:37.156 -08 000000037 INF: ===================Camera #0 Frame #11===================
17-02-28 20:15:37.164 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:37.292 -08 000000066 INF: Y Motor: Unshifted Position: 5673187
17-02-28 20:15:37.327 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:37.327 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:37.327 -08 000000106 INF: ===================Camera #2 Frame #17===================
17-02-28 20:15:37.332 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:37.332 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:37.332 -08 000000037 INF: ===================Camera #0 Frame #17===================
17-02-28 20:15:37.342 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:37.466 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:37.503 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:15:37.503 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:15:37.503 -08 000000037 INF: ===================Camera #0 Frame #24===================
17-02-28 20:15:37.505 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:15:37.505 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:15:37.505 -08 000000106 INF: ===================Camera #2 Frame #24===================
17-02-28 20:15:37.603 -08 000000066 INF: Y Motor: Unshifted Position: 5471039
17-02-28 20:15:37.653 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:37.683 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:15:37.683 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:15:37.683 -08 000000037 INF: ===================Camera #0 Frame #30===================
17-02-28 20:15:37.685 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:15:37.685 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:15:37.685 -08 000000106 INF: ===================Camera #2 Frame #30===================
17-02-28 20:15:37.780 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:37.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:37.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 7 of 40 seconds left===================
17-02-28 20:15:37.860 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:15:37.860 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:15:37.860 -08 000000037 INF: ===================Camera #0 Frame #37===================
17-02-28 20:15:37.864 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:15:37.864 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:15:37.864 -08 000000106 INF: ===================Camera #2 Frame #37===================
17-02-28 20:15:37.916 -08 000000066 INF: Y Motor: Unshifted Position: 5267590
17-02-28 20:15:37.966 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.032 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:15:38.032 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:15:38.032 -08 000000037 INF: ===================Camera #0 Frame #43===================
17-02-28 20:15:38.045 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:15:38.045 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:15:38.045 -08 000000106 INF: ===================Camera #2 Frame #44===================
17-02-28 20:15:38.090 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.207 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:15:38.207 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:15:38.207 -08 000000037 INF: ===================Camera #0 Frame #50===================
17-02-28 20:15:38.219 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:15:38.219 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:15:38.219 -08 000000106 INF: ===================Camera #2 Frame #50===================
17-02-28 20:15:38.230 -08 000000066 INF: Y Motor: Unshifted Position: 5063924
17-02-28 20:15:38.280 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.386 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:15:38.386 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:15:38.386 -08 000000037 INF: ===================Camera #0 Frame #56===================
17-02-28 20:15:38.398 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:15:38.398 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:15:38.398 -08 000000106 INF: ===================Camera #2 Frame #57===================
17-02-28 20:15:38.403 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.539 -08 000000066 INF: Y Motor: Unshifted Position: 4862427
17-02-28 20:15:38.564 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:15:38.564 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:15:38.564 -08 000000037 INF: ===================Camera #0 Frame #63===================
17-02-28 20:15:38.582 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:15:38.582 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:15:38.582 -08 000000106 INF: ===================Camera #2 Frame #63===================
17-02-28 20:15:38.589 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.716 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.745 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:15:38.745 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:15:38.745 -08 000000037 INF: ===================Camera #0 Frame #69===================
17-02-28 20:15:38.758 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:15:38.758 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:15:38.758 -08 000000106 INF: ===================Camera #2 Frame #70===================
17-02-28 20:15:38.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:38.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 6 of 40 seconds left===================
17-02-28 20:15:38.852 -08 000000066 INF: Y Motor: Unshifted Position: 4658763
17-02-28 20:15:38.902 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.913 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:15:38.913 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:15:38.913 -08 000000037 INF: ===================Camera #0 Frame #76===================
17-02-28 20:15:38.940 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:15:38.940 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:15:38.940 -08 000000106 INF: ===================Camera #2 Frame #77===================
17-02-28 20:15:39.026 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.085 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:15:39.085 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:15:39.085 -08 000000037 INF: ===================Camera #0 Frame #82===================
17-02-28 20:15:39.115 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:15:39.115 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:15:39.115 -08 000000106 INF: ===================Camera #2 Frame #83===================
17-02-28 20:15:39.165 -08 000000066 INF: Y Motor: Unshifted Position: 4455299
17-02-28 20:15:39.215 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.254 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:15:39.254 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:15:39.254 -08 000000037 INF: ===================Camera #0 Frame #88===================
17-02-28 20:15:39.285 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:15:39.285 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:15:39.285 -08 000000106 INF: ===================Camera #2 Frame #89===================
17-02-28 20:15:39.339 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.423 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:15:39.423 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:15:39.423 -08 000000037 INF: ===================Camera #0 Frame #94===================
17-02-28 20:15:39.454 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:15:39.454 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:15:39.454 -08 000000106 INF: ===================Camera #2 Frame #96===================
17-02-28 20:15:39.475 -08 000000066 INF: Y Motor: Unshifted Position: 4253588
17-02-28 20:15:39.525 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.592 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:15:39.592 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:15:39.592 -08 000000037 INF: ===================Camera #0 Frame #101===================
17-02-28 20:15:39.626 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:15:39.626 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:15:39.626 -08 000000106 INF: ===================Camera #2 Frame #102===================
17-02-28 20:15:39.650 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.763 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:15:39.763 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:15:39.763 -08 000000037 INF: ===================Camera #0 Frame #107===================
17-02-28 20:15:39.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:39.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 5 of 40 seconds left===================
17-02-28 20:15:39.791 -08 000000066 INF: Y Motor: Unshifted Position: 4049260
17-02-28 20:15:39.797 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:15:39.797 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:15:39.797 -08 000000106 INF: ===================Camera #2 Frame #108===================
17-02-28 20:15:39.841 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.931 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:15:39.931 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:15:39.931 -08 000000037 INF: ===================Camera #0 Frame #113===================
17-02-28 20:15:39.963 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.968 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:15:39.968 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:15:39.968 -08 000000106 INF: ===================Camera #2 Frame #114===================
17-02-28 20:15:40.099 -08 000000066 INF: Y Motor: Unshifted Position: 3842997
17-02-28 20:15:40.100 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:15:40.100 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:15:40.100 -08 000000037 INF: ===================Camera #0 Frame #119===================
17-02-28 20:15:40.138 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:15:40.138 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:15:40.138 -08 000000106 INF: ===================Camera #2 Frame #121===================
17-02-28 20:15:40.149 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:40.269 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:15:40.269 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:15:40.269 -08 000000037 INF: ===================Camera #0 Frame #126===================
17-02-28 20:15:40.276 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:40.311 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:15:40.311 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:15:40.311 -08 000000106 INF: ===================Camera #2 Frame #127===================
17-02-28 20:15:40.412 -08 000000066 INF: Y Motor: Unshifted Position: 3643004
17-02-28 20:15:40.441 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:15:40.441 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:15:40.444 -08 000000037 INF: ===================Camera #0 Frame #132===================
17-02-28 20:15:40.462 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:40.481 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:15:40.481 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:15:40.481 -08 000000106 INF: ===================Camera #2 Frame #133===================
17-02-28 20:15:40.586 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:40.612 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:15:40.612 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:15:40.612 -08 000000037 INF: ===================Camera #0 Frame #138===================
17-02-28 20:15:40.651 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:15:40.651 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:15:40.651 -08 000000106 INF: ===================Camera #2 Frame #140===================
17-02-28 20:15:40.725 -08 000000066 INF: Y Motor: Unshifted Position: 3439992
17-02-28 20:15:40.775 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:40.780 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:15:40.780 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:15:40.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:40.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 4 of 40 seconds left===================
17-02-28 20:15:40.780 -08 000000037 INF: ===================Camera #0 Frame #144===================
17-02-28 20:15:40.824 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:15:40.824 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:15:40.824 -08 000000106 INF: ===================Camera #2 Frame #146===================
17-02-28 20:15:40.900 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:40.949 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:15:40.949 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:15:40.949 -08 000000037 INF: ===================Camera #0 Frame #151===================
17-02-28 20:15:40.993 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:15:40.993 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:15:40.993 -08 000000106 INF: ===================Camera #2 Frame #152===================
17-02-28 20:15:41.035 -08 000000066 INF: Y Motor: Unshifted Position: 3238928
17-02-28 20:15:41.085 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:41.120 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:15:41.120 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:15:41.120 -08 000000037 INF: ===================Camera #0 Frame #157===================
17-02-28 20:15:41.162 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:15:41.162 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:15:41.162 -08 000000106 INF: ===================Camera #2 Frame #158===================
17-02-28 20:15:41.213 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:41.288 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:15:41.288 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:15:41.288 -08 000000037 INF: ===================Camera #0 Frame #163===================
17-02-28 20:15:41.331 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:15:41.331 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:15:41.331 -08 000000106 INF: ===================Camera #2 Frame #165===================
17-02-28 20:15:41.348 -08 000000066 INF: Y Motor: Unshifted Position: 3035484
17-02-28 20:15:41.398 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:41.456 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:15:41.456 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:15:41.456 -08 000000037 INF: ===================Camera #0 Frame #169===================
17-02-28 20:15:41.503 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:15:41.503 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:15:41.503 -08 000000106 INF: ===================Camera #2 Frame #171===================
17-02-28 20:15:41.522 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:41.624 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:15:41.624 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:15:41.624 -08 000000037 INF: ===================Camera #0 Frame #175===================
17-02-28 20:15:41.659 -08 000000066 INF: Y Motor: Unshifted Position: 2833337
17-02-28 20:15:41.672 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:15:41.672 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:15:41.672 -08 000000106 INF: ===================Camera #2 Frame #177===================
17-02-28 20:15:41.709 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:41.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:41.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 3 of 40 seconds left===================
17-02-28 20:15:41.793 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:15:41.793 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:15:41.793 -08 000000037 INF: ===================Camera #0 Frame #182===================
17-02-28 20:15:41.836 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:41.844 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:15:41.844 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:15:41.844 -08 000000106 INF: ===================Camera #2 Frame #183===================
17-02-28 20:15:41.964 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:15:41.964 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:15:41.964 -08 000000037 INF: ===================Camera #0 Frame #188===================
17-02-28 20:15:41.973 -08 000000066 INF: Y Motor: Unshifted Position: 2629026
17-02-28 20:15:42.013 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:15:42.013 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:15:42.013 -08 000000106 INF: ===================Camera #2 Frame #190===================
17-02-28 20:15:42.023 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.132 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:15:42.132 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:15:42.132 -08 000000037 INF: ===================Camera #0 Frame #194===================
17-02-28 20:15:42.146 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.185 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:15:42.185 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:15:42.185 -08 000000106 INF: ===================Camera #2 Frame #196===================
17-02-28 20:15:42.285 -08 000000066 INF: Y Motor: Unshifted Position: 2426006
17-02-28 20:15:42.300 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:15:42.300 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:15:42.300 -08 000000037 INF: ===================Camera #0 Frame #200===================
17-02-28 20:15:42.335 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.356 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:15:42.356 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:15:42.356 -08 000000106 INF: ===================Camera #2 Frame #202===================
17-02-28 20:15:42.459 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.468 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:15:42.468 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:15:42.468 -08 000000037 INF: ===================Camera #0 Frame #206===================
17-02-28 20:15:42.527 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209.
17-02-28 20:15:42.527 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209
17-02-28 20:15:42.527 -08 000000106 INF: ===================Camera #2 Frame #209===================
17-02-28 20:15:42.595 -08 000000066 INF: Y Motor: Unshifted Position: 2224514
17-02-28 20:15:42.636 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:15:42.636 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:15:42.636 -08 000000037 INF: ===================Camera #0 Frame #213===================
17-02-28 20:15:42.645 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.701 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:15:42.701 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:15:42.701 -08 000000106 INF: ===================Camera #2 Frame #215===================
17-02-28 20:15:42.772 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:42.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 2 of 40 seconds left===================
17-02-28 20:15:42.807 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:15:42.807 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:15:42.807 -08 000000037 INF: ===================Camera #0 Frame #219===================
17-02-28 20:15:42.872 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:15:42.872 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:15:42.872 -08 000000106 INF: ===================Camera #2 Frame #221===================
17-02-28 20:15:42.910 -08 000000066 INF: Y Motor: Unshifted Position: 2020201
17-02-28 20:15:42.960 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.975 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:15:42.975 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:15:42.975 -08 000000037 INF: ===================Camera #0 Frame #225===================
17-02-28 20:15:43.041 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-02-28 20:15:43.041 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-02-28 20:15:43.041 -08 000000106 INF: ===================Camera #2 Frame #228===================
17-02-28 20:15:43.084 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:43.143 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:15:43.143 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:15:43.143 -08 000000037 INF: ===================Camera #0 Frame #231===================
17-02-28 20:15:43.213 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-02-28 20:15:43.213 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-02-28 20:15:43.213 -08 000000106 INF: ===================Camera #2 Frame #234===================
17-02-28 20:15:43.221 -08 000000066 INF: Y Motor: Unshifted Position: 1817390
17-02-28 20:15:43.271 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:43.311 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:15:43.311 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:15:43.311 -08 000000037 INF: ===================Camera #0 Frame #238===================
17-02-28 20:15:43.385 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:15:43.385 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:15:43.385 -08 000000106 INF: ===================Camera #2 Frame #240===================
17-02-28 20:15:43.396 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:43.482 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:15:43.482 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:15:43.482 -08 000000037 INF: ===================Camera #0 Frame #244===================
17-02-28 20:15:43.531 -08 000000066 INF: Y Motor: Unshifted Position: 1614596
17-02-28 20:15:43.556 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247.
17-02-28 20:15:43.556 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247
17-02-28 20:15:43.556 -08 000000106 INF: ===================Camera #2 Frame #247===================
17-02-28 20:15:43.581 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:43.650 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:15:43.650 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:15:43.650 -08 000000037 INF: ===================Camera #0 Frame #250===================
17-02-28 20:15:43.708 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:43.731 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-02-28 20:15:43.731 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-02-28 20:15:43.731 -08 000000106 INF: ===================Camera #2 Frame #253===================
17-02-28 20:15:43.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:43.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 1 of 40 seconds left===================
17-02-28 20:15:43.819 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:15:43.819 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:15:43.819 -08 000000037 INF: ===================Camera #0 Frame #256===================
17-02-28 20:15:43.844 -08 000000066 INF: Y Motor: Unshifted Position: 1412218
17-02-28 20:15:43.894 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:43.902 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:15:43.902 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:15:43.902 -08 000000106 INF: ===================Camera #2 Frame #259===================
17-02-28 20:15:43.987 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:15:43.987 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:15:43.987 -08 000000037 INF: ===================Camera #0 Frame #262===================
17-02-28 20:15:44.018 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:44.073 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266.
17-02-28 20:15:44.073 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266
17-02-28 20:15:44.073 -08 000000106 INF: ===================Camera #2 Frame #266===================
17-02-28 20:15:44.155 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:15:44.155 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:15:44.155 -08 000000037 INF: ===================Camera #0 Frame #269===================
17-02-28 20:15:44.158 -08 000000066 INF: Y Motor: Unshifted Position: 1210500
17-02-28 20:15:44.208 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:44.247 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:15:44.247 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:15:44.247 -08 000000106 INF: ===================Camera #2 Frame #272===================
17-02-28 20:15:44.266 -08 000000106 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:15:44.267 -08 000000106 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:44.280 -08 000000075 INF: FPGA: Recv TDIYWAIT
17-02-28 20:15:44.280 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:44.282 -08 000000045 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:15:44.282 -08 000000032 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:15:44.282 -08 000000082 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:15:44.283 -08 000000032 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:15:44.283 -08 000000032 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:15:44.283 -08 000000032 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:15:44.283 -08 000000032 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:15:44.283 -08 000000082 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:15:44.283 -08 000000082 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:15:44.283 -08 000000082 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:15:44.284 -08 000000082 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:15:44.332 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:44.440 -08 000000106 INF: Camera #2 ReleaseBuffer
17-02-28 20:15:44.440 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:15:44.440 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:15:44.440 -08 000000037 INF: ===================Camera #0 Frame #272===================
17-02-28 20:15:44.440 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:15:44.449 -08 000000037 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:15:44.450 -08 000000037 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:44.468 -08 000000066 INF: Y Motor: Unshifted Position: 1006403
17-02-28 20:15:44.473 -08 000000106 INF: ======================================
17-02-28 20:15:44.518 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:44.585 -08 000000037 INF: Camera #0 ReleaseBuffer
17-02-28 20:15:44.585 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:15:44.617 -08 000000037 INF: ======================================
17-02-28 20:15:44.618 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:15:44.619 -08 000000025 INF: ======================================
17-02-28 20:15:44.652 -08 000000028 INF: FPGA: Recv EX1MV
17-02-28 20:15:44.652 -08 000000028 INF: FPGA: Recv EX2MV
17-02-28 20:15:44.652 -08 000000082 INF: Excitation Filter 2: Moved 107 steps in 369.0493 ms
17-02-28 20:15:44.652 -08 000000032 INF: Excitation Filter 1: Moved 107 steps in 369.2755 ms
17-02-28 20:15:44.652 -08 000000032 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.3983 ms
17-02-28 20:15:44.652 -08 000000032 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.4694 ms
17-02-28 20:15:44.652 -08 000000082 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.1573 ms
17-02-28 20:15:44.652 -08 000000082 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.5694 ms
17-02-28 20:15:44.652 -08 000000032 INF: ======================================
17-02-28 20:15:44.653 -08 000000082 INF: ======================================
17-02-28 20:15:44.654 -08 000000066 INF: Y Motor: Unshifted Position: 983624
17-02-28 20:15:44.654 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:44.654 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:44.654 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:44.655 -08 000000045 INF: ======================================
17-02-28 20:15:44.716 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:15:44.716 -08 000000066 INF: Y Motor: Moved to 14.8362 after 7854 ms
17-02-28 20:15:44.716 -08 000000066 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:44.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:44.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:44.779 -08 000000042 INF: WaitCommand(40000) end
17-02-28 20:15:44.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:44.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:44.780 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:44.782 -08 000000066 INF: Y Motor: Recv v 4097\r
17-02-28 20:15:44.782 -08 000000066 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:44.782 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:44.840 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:44.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Selecting Reagent HIM (1)===================
17-02-28 20:15:44.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:44.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:15:44.841 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:15:44.841 -08 000000066 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:44.841 -08 000000066 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:44.906 -08 000000066 INF: Y Motor: Recv v 134217728\r
17-02-28 20:15:44.906 -08 000000066 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:15:44.906 -08 000000066 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:44.906 -08 000000066 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:44.968 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:15:44.968 -08 000000066 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:44.968 -08 000000066 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:44.968 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:45.030 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:45.030 -08 000000066 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:45.030 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:45.093 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:45.093 -08 000000066 INF: ======================================
17-02-28 20:15:45.094 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:45.095 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:45.096 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.096 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:15:45.152 -08 000000023 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:15:45.152 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:45.216 -08 000000064 INF: FPGA: Recv TDIYERD 1483627
17-02-28 20:15:45.216 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:15:45.276 -08 000000074 INF: FPGA: Recv ZADCR 33658
17-02-28 20:15:45.276 -08 000000018 INF: At scan end Y pos = 14.836 and Z pos = -0.129. Y moved -48.539 mm
17-02-28 20:15:45.276 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:15:45.340 -08 000000071 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:15:45.341 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:15:45.341 -08 000000018 INF: TDIScan finished after 12671.3897 ms
17-02-28 20:15:45.341 -08 000000018 INF: Image[0]: Y should trigger at 63.375 mm, 2nd row was at 64.284 mm (error = 0.909 mm)
17-02-28 20:15:45.341 -08 000000018 INF: Image[2]: Y should trigger at 63.375 mm, 2nd row was at 64.284 mm (error = 0.909 mm)
17-02-28 20:15:45.343 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.375 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.814 um
17-02-28 20:15:45.375 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.376 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:15:45.404 -08 000000075 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:15:45.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.405 -08 000000030 INF: ===================Dither Clean Up Command===================
17-02-28 20:15:45.405 -08 000000053 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:15:45.405 -08 000000099 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:15:45.405 -08 000000106 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:15:45.405 -08 000000099 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:45.405 -08 000000099 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:45.406 -08 000000053 INF: ======================================
17-02-28 20:15:45.406 -08 000000106 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:15:45.406 -08 000000084 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:15:45.406 -08 000000106 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:15:45.406 -08 000000079 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:45.407 -08 000000084 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:15:45.409 -08 000000079 INF: ===================LFT:Extracting coords===================
17-02-28 20:15:45.435 -08 000000079 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:45.435 -08 000000079 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:15:45.436 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.436 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.436 -08 000000025 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.436 -08 000000037 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.436 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:45.437 -08 000000095 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:45.437 -08 000000025 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:45.437 -08 000000037 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:45.463 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:45.463 -08 000000101 INF: FPGA: Recv ZSEL 
17-02-28 20:15:45.463 -08 000000084 INF: FPGA: Xmit ZDACW 33907\n
17-02-28 20:15:45.463 -08 000000106 INF: ======================================
17-02-28 20:15:45.465 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:15:45.465 -08 000000099 INF: ======================================
17-02-28 20:15:45.466 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:45.466 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:45.466 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:45.511 -08 000000052 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:45.511 -08 000000095 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:45.511 -08 000000025 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:45.511 -08 000000037 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:45.528 -08 000000023 INF: FPGA: Recv ZDACW 
17-02-28 20:15:45.529 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:45.529 -08 000000084 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:15:45.529 -08 000000084 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:15:45.537 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 1, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 12, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:15:45.590 -08 000000099 INF: FPGA: Recv TDIBB
17-02-28 20:15:45.590 -08 000000084 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:15:45.591 -08 000000084 INF: ======================================
17-02-28 20:15:45.629 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:15:45.662 -08 000000052 INF: LFT found best fwhm score 2.000024 in 151 ms
17-02-28 20:15:45.662 -08 000000052 INF: LFT found good score at index 433 with fwhm value 2.000024. Next cycle, cycle 4 starting Z position for top surface is at -0.132 mm FC:A, C:3,L:6,T
17-02-28 20:15:45.662 -08 000000025 INF: LFT found best fwhm score 2.000745 in 151 ms
17-02-28 20:15:45.662 -08 000000025 INF: LFT found good score at index 5549 with fwhm value 2.000745. Next cycle, cycle 4 starting Z position for top surface is at -0.132 mm FC:A, C:3,L:6,T
17-02-28 20:15:45.662 -08 000000095 INF: LFT found best fwhm score 2.000118 in 151 ms
17-02-28 20:15:45.662 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.662 -08 000000095 INF: LFT found good score at index 3729 with fwhm value 2.000118. Next cycle, cycle 4 starting Z position for top surface is at -0.132 mm FC:A, C:3,L:6,T
17-02-28 20:15:45.662 -08 000000037 INF: LFT found best fwhm score 2.215148 in 151 ms
17-02-28 20:15:45.662 -08 000000037 INF: LFT found good score at index 0 with fwhm value 2.215148. Next cycle, cycle 4 starting Z position for top surface is at -0.132 mm FC:A, C:3,L:6,T
17-02-28 20:15:45.662 -08 000000025 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.663 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.663 -08 000000037 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.663 -08 000000052 INF: ======================================
17-02-28 20:15:45.663 -08 000000025 INF: ======================================
17-02-28 20:15:45.663 -08 000000095 INF: ======================================
17-02-28 20:15:45.663 -08 000000037 INF: ======================================
17-02-28 20:15:45.664 -08 000000079 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:45.665 -08 000000079 INF: LFT weighted average best Z for top surface is at -0.132mm FC:A, C:3,L:6,T
17-02-28 20:15:45.665 -08 000000079 INF: ======================================
17-02-28 20:15:45.666 -08 000000030 INF: ======================================
17-02-28 20:15:45.667 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:15:45.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:15:45.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:15:45.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:15:45.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011===================
17-02-28 20:15:45.670 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011===================
17-02-28 20:15:45.670 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:15:45.670 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011===================
17-02-28 20:15:45.671 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Waiting for image analysis===================
17-02-28 20:15:45.671 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:45.694 -08 000000018 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:15:45.694 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:45.694 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:45.694 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:15:45.694 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:45.695 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:45.695 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:15:45.719 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:45.720 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:45.721 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:45.721 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:45.734 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":6,"Tile":1201,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF280","HCSMMF222","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.745 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:15:45.745 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:15:45.781 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:45.782 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:45.782 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:15:45.783 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:15:45.892 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:15:45.893 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":6,"Tile":1202,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF191","HCSMMF201","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.896 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":6,"Tile":1207,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF212","HCSMMF241","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.906 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":6,"Tile":1203,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF232","HCSMMF282","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.919 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":6,"Tile":1204,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF267","HCSMMF242","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.921 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":6,"Tile":1211,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF272","HCSMMF281","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.923 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":6,"Tile":1206,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF284","HCSMMF202","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.924 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":6,"Tile":1209,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF211","HCSMMF218","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.927 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":6,"Tile":1205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF220","HCSMMF240","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.928 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":6,"Tile":1208,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF198","HCSMMF253","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.930 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":6,"Tile":1214,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF228","HCSMMF259","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.932 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":6,"Tile":1213,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF217","HCSMMF216","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.942 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":6,"Tile":1212,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF249","HCSMMF273","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.945 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":6,"Tile":1215,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF229","HCSMMF209","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.948 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":6,"Tile":1210,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF183","HCSMMF287","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.953 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:45.959 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":6,"Tile":1216,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF258","HCSMMF196","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.970 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":6,"Tile":1218,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF236","HCSMMF178","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.975 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":6,"Tile":1221,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF213","HCSMMF180","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.979 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":6,"Tile":1217,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF286","HCSMMF194","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.982 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":6,"Tile":1219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF197","HCSMMF193","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.985 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":6,"Tile":1224,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF252","HCSMMF199","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.988 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":6,"Tile":1222,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF187","HCSMMF279","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.993 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":6,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF205","HCSMMF246","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.995 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":6,"Tile":1220,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF239","HCSMMF262","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.995 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":6,"Tile":1228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF185","HCSMMF210","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.996 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":6,"Tile":1223,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF257","HCSMMF248","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.997 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":6,"Tile":1225,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF223","HCSMMF181","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:46.000 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":6,"Tile":1226,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF244","HCSMMF200","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:46.019 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:46.025 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:15:46.054 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:46.128 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:46.128 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:15:46.136 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:46.165 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:46.170 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:15:46.198 -08 000000025 INF: FPGA: Recv MIOCOMPR
17-02-28 20:15:46.198 -08 000000018 INF: Compensator: Moved OutOfPath in 415 ms
17-02-28 20:15:46.198 -08 000000018 INF: Lane 7, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:15:46.199 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:46.200 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:46.200 -08 000000044 INF: ===================Move Tilt Motor 1===================
17-02-28 20:15:46.200 -08 000000064 INF: ===================Move Tilt Motor 2===================
17-02-28 20:15:46.200 -08 000000047 INF: ===================Move Tilt Motor 3===================
17-02-28 20:15:46.201 -08 000000064 INF: ======================================
17-02-28 20:15:46.201 -08 000000047 INF: ======================================
17-02-28 20:15:46.201 -08 000000044 INF: ======================================
17-02-28 20:15:46.202 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:46.203 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:46.209 -08 000000018 INF: Transformed XStagePosition from 22.72893 mm to 22.728931427002 mm.
17-02-28 20:15:46.217 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:15:46.218 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:15:46.218 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:15:46.218 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:46.218 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:46.221 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:15:46.222 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:15:46.222 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:15:46.260 -08 000000090 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:46.260 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:46.261 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:15:46.261 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1293 mm
17-02-28 20:15:46.261 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:15:46.316 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:46.321 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:15:46.322 -08 000000025 INF: FPGA: Recv ZTRG 
17-02-28 20:15:46.322 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:15:46.387 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:46.387 -08 000000046 INF: FPGA: Recv ZYT 
17-02-28 20:15:46.387 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:15:46.387 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:15:46.422 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:46.427 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:15:46.449 -08 000000066 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:15:46.449 -08 000000066 INF: FPGA: Recv ZMV 
17-02-28 20:15:46.449 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:15:46.449 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.7386 ms
17-02-28 20:15:46.449 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:15:46.451 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:46.511 -08 000000079 INF: FPGA: Recv ZDACR 60292
17-02-28 20:15:46.511 -08 000000018 INF: Z Motor: MoveAndTrigger took 250.6526 ms w/comms
17-02-28 20:15:46.511 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:15:46.511 -08 000000018 INF: Z Motor: MoveAbsStepped took 250.8328 ms
17-02-28 20:15:46.512 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:46.512 -08 000000018 INF: Transformed XStagePosition from 22.72893 mm to 22.728931427002 mm.
17-02-28 20:15:46.521 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:15:46.521 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:46.521 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:46.521 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:15:46.521 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:15:46.531 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:46.551 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:15:46.573 -08 000000045 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:46.592 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:46.593 -08 000000018 INF: Transformed XStagePosition from 22.72893 mm to 22.728931427002 mm.
17-02-28 20:15:46.601 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:15:46.601 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:46.601 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:46.603 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:46.604 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:15:46.604 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:46.604 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = G_1
17-02-28 20:15:46.604 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:46.605 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:46.605 -08 000000037 INF: ===================MoveEmissionFilters===================
17-02-28 20:15:46.605 -08 000000098 INF: ===================Move X,Y===================
17-02-28 20:15:46.606 -08 000000098 INF: ===================Move X,Y, Parallel===================
17-02-28 20:15:46.606 -08 000000079 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:46.606 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:46.606 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:46.606 -08 000000039 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:46.607 -08 000000032 INF: ===================Move X Motor without settling===================
17-02-28 20:15:46.607 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:46.607 -08 000000039 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:46.607 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:46.608 -08 000000032 INF: X Motor: Xmit PR VM\n
17-02-28 20:15:46.608 -08 000000060 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:46.608 -08 000000060 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8362 mm
17-02-28 20:15:46.608 -08 000000060 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:46.608 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:46.608 -08 000000079 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:46.608 -08 000000099 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:15:46.608 -08 000000010 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:15:46.608 -08 000000084 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:15:46.608 -08 000000071 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:15:46.609 -08 000000082 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:15:46.609 -08 000000023 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:15:46.609 -08 000000084 INF: ======================================
17-02-28 20:15:46.609 -08 000000010 INF: ======================================
17-02-28 20:15:46.609 -08 000000052 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:15:46.609 -08 000000106 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:15:46.609 -08 000000082 INF: ======================================
17-02-28 20:15:46.610 -08 000000071 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:15:46.610 -08 000000052 INF: ======================================
17-02-28 20:15:46.610 -08 000000071 INF: ======================================
17-02-28 20:15:46.610 -08 000000106 INF: ======================================
17-02-28 20:15:46.610 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:46.611 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:46.611 -08 000000099 INF: ======================================
17-02-28 20:15:46.612 -08 000000085 INF: ======================================
17-02-28 20:15:46.612 -08 000000064 INF: ======================================
17-02-28 20:15:46.612 -08 000000023 INF: ======================================
17-02-28 20:15:46.613 -08 000000039 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:46.614 -08 000000079 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:46.614 -08 000000039 INF: ======================================
17-02-28 20:15:46.615 -08 000000079 INF: ======================================
17-02-28 20:15:46.616 -08 000000037 INF: ======================================
17-02-28 20:15:46.637 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:15:46.637 -08 000000060 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:46.637 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:46.637 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:46.637 -08 000000032 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:15:46.637 -08 000000032 INF: X Motor: Xmit PR VI\n
17-02-28 20:15:46.700 -08 000000032 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:15:46.700 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:15:46.700 -08 000000032 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:15:46.700 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:46.700 -08 000000032 INF: X Motor: Moving to 22.7289 mm @15.000 mm/sec, started at 20.5259 mm
17-02-28 20:15:46.700 -08 000000032 INF: X Motor: Xmit MA -14857\n
17-02-28 20:15:46.737 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:46.762 -08 000000032 INF: X Motor: Recv MA -14857\r\n>
17-02-28 20:15:46.762 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:15:46.762 -08 000000060 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:46.762 -08 000000032 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:15:46.762 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:46.762 -08 000000060 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:15:46.762 -08 000000060 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:15:46.762 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-02-28 20:15:46.811 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:15:46.824 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:15:46.824 -08 000000060 INF: Y Motor: Start the move command
17-02-28 20:15:46.824 -08 000000060 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:46.862 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V800IP2304R\r
17-02-28 20:15:46.889 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:15:46.889 -08 000000060 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:15:46.889 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:46.949 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:47.012 -08 000000060 INF: Y Motor: Unshifted Position: 1065109
17-02-28 20:15:47.049 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:47.062 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:47.134 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:47.186 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:47.327 -08 000000060 INF: Y Motor: Unshifted Position: 1783621
17-02-28 20:15:47.377 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:47.384 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:47.389 -08 000000032 INF: X Motor: Xmit PR ER\n
17-02-28 20:15:47.449 -08 000000032 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:15:47.449 -08 000000032 INF: X Motor: Moved to 22.7280 after 687 ms
17-02-28 20:15:47.449 -08 000000032 INF: ======================================
17-02-28 20:15:47.450 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:47.499 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:47.637 -08 000000060 INF: Y Motor: Unshifted Position: 2551139
17-02-28 20:15:47.687 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:47.700 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:47.760 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:47.811 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:47.948 -08 000000060 INF: Y Motor: Unshifted Position: 3336919
17-02-28 20:15:47.998 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.010 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:48.071 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:48.122 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.260 -08 000000060 INF: Y Motor: Unshifted Position: 4116996
17-02-28 20:15:48.310 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.321 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:48.382 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:48.433 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.578 -08 000000060 INF: Y Motor: Unshifted Position: 4897758
17-02-28 20:15:48.628 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.632 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:48.695 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:48.746 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.882 -08 000000060 INF: Y Motor: Unshifted Position: 5673759
17-02-28 20:15:48.932 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.945 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:49.008 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:49.059 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:49.196 -08 000000060 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:15:49.196 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:49.196 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:49.258 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:49.258 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:15:49.258 -08 000000060 INF: Y Motor: Moved to 64.4706 after 2369 ms
17-02-28 20:15:49.258 -08 000000060 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:49.320 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:49.321 -08 000000060 INF: Y Motor: Recv v 4096\r
17-02-28 20:15:49.321 -08 000000060 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:49.321 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:49.383 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:15:49.383 -08 000000060 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:49.383 -08 000000060 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:49.445 -08 000000060 INF: Y Motor: Recv v 402653184\r
17-02-28 20:15:49.445 -08 000000060 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:15:49.445 -08 000000060 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:49.445 -08 000000060 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:49.507 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:15:49.507 -08 000000060 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:49.507 -08 000000060 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:49.507 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:49.569 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:15:49.569 -08 000000060 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:49.569 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:49.570 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:49.630 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:49.631 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:15:49.631 -08 000000060 INF: ======================================
17-02-28 20:15:49.632 -08 000000098 INF: ===================Move X,Y===================
17-02-28 20:15:49.633 -08 000000098 INF: ======================================
17-02-28 20:15:49.634 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:49.635 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:49.635 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:15:49.635 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:15:49.697 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:49.697 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:15:49.756 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:15:49.756 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:15:49.757 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:49.757 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:49.818 -08 000000051 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:15:49.818 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:15:49.819 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:49.819 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:49.820 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:49.820 -08 000000045 INF: ===================Set YMotor gains for scans===================
17-02-28 20:15:49.821 -08 000000045 INF: ======================================
17-02-28 20:15:49.821 -08 000000075 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:15:49.822 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:49.823 -08 000000075 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:15:49.824 -08 000000075 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:15:49.824 -08 000000075 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:15:49.880 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:49.880 -08 000000085 INF: FPGA: Recv TDIYPOS
17-02-28 20:15:49.880 -08 000000075 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:15:49.882 -08 000000075 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:15:49.882 -08 000000075 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:15:49.941 -08 000000044 INF: FPGA: Recv TDIYARM2
17-02-28 20:15:49.941 -08 000000075 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:15:49.942 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:49.943 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:49.944 -08 000000075 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:15:49.944 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:49.946 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:15:49.947 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:15:49.947 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:50.192 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:50.256 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:50.318 -08 000000075 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:15:50.318 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:15:50.318 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:50.333 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:15:50.335 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:50.506 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:50.566 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:50.712 -08 000000075 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:15:50.712 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:15:50.712 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:50.727 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:15:50.729 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:15:50.730 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:50.731 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:50.732 -08 000000075 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:15:50.733 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:50.734 -08 000000075 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:15:50.734 -08 000000075 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:15:50.734 -08 000000075 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:15:50.734 -08 000000075 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:15:50.752 -08 000000098 INF: FPGA: Recv ZYT 
17-02-28 20:15:50.752 -08 000000075 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:15:50.752 -08 000000075 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:15:50.816 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:50.816 -08 000000074 INF: FPGA: Recv ZARM
17-02-28 20:15:50.816 -08 000000075 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 63.6771 ms
17-02-28 20:15:50.816 -08 000000075 INF: Z Motor: ArmAbsStepped took 81.6239 ms
17-02-28 20:15:50.816 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:50.818 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:50.819 -08 000000075 INF: ======================================
17-02-28 20:15:50.820 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:50.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:50.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:50.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:50.822 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:50.823 -08 000000038 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:15:50.823 -08 000000038 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:15:50.823 -08 000000038 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:15:50.823 -08 000000038 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:15:50.823 -08 000000038 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:15:50.823 -08 000000051 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:15:50.823 -08 000000051 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:15:50.823 -08 000000051 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:15:50.824 -08 000000051 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:15:50.825 -08 000000051 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:15:50.879 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:51.129 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:51.192 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:51.192 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:51.193 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:51.193 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:15:51.193 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left===================
17-02-28 20:15:51.252 -08 000000046 INF: FPGA: Recv EX1MV
17-02-28 20:15:51.252 -08 000000046 INF: FPGA: Recv EX2MV
17-02-28 20:15:51.252 -08 000000051 INF: Excitation Filter 2: Moved -107 steps in 428.5061 ms
17-02-28 20:15:51.252 -08 000000038 INF: Excitation Filter 1: Moved -107 steps in 428.9369 ms
17-02-28 20:15:51.252 -08 000000051 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 428.6582 ms
17-02-28 20:15:51.252 -08 000000051 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 428.7578 ms
17-02-28 20:15:51.252 -08 000000038 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 429.0429 ms
17-02-28 20:15:51.252 -08 000000038 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 429.2254 ms
17-02-28 20:15:51.253 -08 000000051 INF: ======================================
17-02-28 20:15:51.253 -08 000000038 INF: ======================================
17-02-28 20:15:51.254 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:51.256 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:51.257 -08 000000052 INF: ===================Serial===================
17-02-28 20:15:51.257 -08 000000079 INF: ===================Camera TDI===================
17-02-28 20:15:51.257 -08 000000090 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:51.257 -08 000000090 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:15:51.257 -08 000000060 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:51.258 -08 000000090 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:51.258 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:51.258 -08 000000052 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:15:51.258 -08 000000052 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:15:51.258 -08 000000079 INF: ===================Camera TDI, Parallel===================
17-02-28 20:15:51.259 -08 000000060 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:15:51.259 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:15:51.259 -08 000000060 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:15:51.259 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:15:51.260 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.260 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.261 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.261 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.316 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:51.316 -08 000000090 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:51.316 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:51.378 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:51.378 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:51.410 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.410 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.411 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.411 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.443 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:51.443 -08 000000090 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:51.443 -08 000000090 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:15:51.443 -08 000000090 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:15:51.505 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:51.505 -08 000000090 INF: Y Motor: Start the move command
17-02-28 20:15:51.505 -08 000000090 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:51.560 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.560 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.561 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.561 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.567 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:51.567 -08 000000090 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:15:51.567 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:51.691 -08 000000090 INF: Y Motor: Unshifted Position: 5929083
17-02-28 20:15:51.710 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.710 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.711 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.711 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.741 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:51.860 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:15:51.860 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:15:51.860 -08 000000098 INF: ===================Camera #2 Frame #1===================
17-02-28 20:15:51.861 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:15:51.861 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:15:51.861 -08 000000039 INF: ===================Camera #0 Frame #1===================
17-02-28 20:15:51.865 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:52.004 -08 000000090 INF: Y Motor: Unshifted Position: 5882126
17-02-28 20:15:52.015 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:15:52.015 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:15:52.015 -08 000000098 INF: ===================Camera #2 Frame #3===================
17-02-28 20:15:52.016 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:15:52.016 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:15:52.016 -08 000000039 INF: ===================Camera #0 Frame #3===================
17-02-28 20:15:52.054 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:52.172 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:15:52.172 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:15:52.172 -08 000000098 INF: ===================Camera #2 Frame #4===================
17-02-28 20:15:52.175 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:15:52.175 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:15:52.175 -08 000000039 INF: ===================Camera #0 Frame #4===================
17-02-28 20:15:52.178 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:52.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:52.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 4 of 5 seconds left===================
17-02-28 20:15:52.314 -08 000000090 INF: Y Motor: Unshifted Position: 5835572
17-02-28 20:15:52.325 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:52.325 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:52.325 -08 000000098 INF: ===================Camera #2 Frame #5===================
17-02-28 20:15:52.328 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:52.328 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:52.328 -08 000000039 INF: ===================Camera #0 Frame #5===================
17-02-28 20:15:52.364 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:52.377 -08 000000059 INF: FPGA: Recv ZWAIT 
17-02-28 20:15:52.377 -08 000000052 INF: ===================Serial===================
17-02-28 20:15:52.379 -08 000000052 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:15:52.379 -08 000000052 INF: ===================Serial===================
17-02-28 20:15:52.381 -08 000000052 INF: ======================================
17-02-28 20:15:52.439 -08 000000066 INF: FPGA: Recv TDIYWAIT
17-02-28 20:15:52.439 -08 000000060 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:52.441 -08 000000060 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:15:52.442 -08 000000075 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:15:52.442 -08 000000075 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:15:52.442 -08 000000075 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:15:52.442 -08 000000075 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:15:52.442 -08 000000075 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:15:52.442 -08 000000051 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:15:52.443 -08 000000051 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:15:52.443 -08 000000051 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:15:52.443 -08 000000051 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:15:52.444 -08 000000051 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:15:52.478 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:15:52.478 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:15:52.478 -08 000000098 INF: ===================Camera #2 Frame #6===================
17-02-28 20:15:52.481 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:15:52.481 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:15:52.481 -08 000000039 INF: ===================Camera #0 Frame #6===================
17-02-28 20:15:52.481 -08 000000098 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:15:52.482 -08 000000098 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:52.484 -08 000000039 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:15:52.485 -08 000000039 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:52.491 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:52.508 -08 000000098 INF: Camera #2 ReleaseBuffer
17-02-28 20:15:52.508 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:15:52.509 -08 000000098 INF: ======================================
17-02-28 20:15:52.533 -08 000000039 INF: Camera #0 ReleaseBuffer
17-02-28 20:15:52.533 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:15:52.534 -08 000000039 INF: ======================================
17-02-28 20:15:52.536 -08 000000079 INF: ===================Camera TDI===================
17-02-28 20:15:52.537 -08 000000079 INF: ======================================
17-02-28 20:15:52.627 -08 000000090 INF: Y Motor: Unshifted Position: 5790765
17-02-28 20:15:52.677 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:52.813 -08 000000059 INF: FPGA: Recv EX1MV
17-02-28 20:15:52.813 -08 000000059 INF: FPGA: Recv EX2MV
17-02-28 20:15:52.813 -08 000000051 INF: Excitation Filter 2: Moved 107 steps in 370.1172 ms
17-02-28 20:15:52.813 -08 000000075 INF: Excitation Filter 1: Moved 107 steps in 370.6395 ms
17-02-28 20:15:52.813 -08 000000075 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.7475 ms
17-02-28 20:15:52.813 -08 000000075 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.8251 ms
17-02-28 20:15:52.813 -08 000000051 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.256 ms
17-02-28 20:15:52.813 -08 000000051 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.6582 ms
17-02-28 20:15:52.813 -08 000000075 INF: ======================================
17-02-28 20:15:52.813 -08 000000051 INF: ======================================
17-02-28 20:15:52.815 -08 000000090 INF: Y Motor: Unshifted Position: 5790743
17-02-28 20:15:52.815 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:52.815 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:52.815 -08 000000060 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:52.816 -08 000000060 INF: ======================================
17-02-28 20:15:52.876 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:52.876 -08 000000090 INF: Y Motor: Moved to 62.9074 after 1309 ms
17-02-28 20:15:52.876 -08 000000090 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:52.938 -08 000000090 INF: Y Motor: Recv v 4097\r
17-02-28 20:15:52.938 -08 000000090 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:52.938 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:53.003 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:53.003 -08 000000090 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:53.003 -08 000000090 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:53.067 -08 000000090 INF: Y Motor: Recv v 134217728\r
17-02-28 20:15:53.067 -08 000000090 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:15:53.067 -08 000000090 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:53.067 -08 000000090 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:53.128 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:53.128 -08 000000090 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:53.128 -08 000000090 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:53.128 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:53.189 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:53.189 -08 000000090 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:53.189 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:53.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:53.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left===================
17-02-28 20:15:53.251 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:53.251 -08 000000090 INF: ======================================
17-02-28 20:15:53.252 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:53.254 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:53.255 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.255 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:15:53.313 -08 000000038 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:15:53.314 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:53.374 -08 000000045 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:15:53.374 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:15:53.435 -08 000000066 INF: FPGA: Recv ZADCR 2426
17-02-28 20:15:53.435 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:15:53.435 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:15:53.500 -08 000000106 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:15:53.500 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:15:53.500 -08 000000018 INF: TDIScan finished after 6908.0097 ms
17-02-28 20:15:53.500 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:15:53.500 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:15:53.501 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:15:53.563 -08 000000068 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:15:53.564 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.564 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.565 -08 000000050 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:15:53.565 -08 000000028 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:15:53.565 -08 000000052 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:15:53.565 -08 000000050 INF: ======================================
17-02-28 20:15:53.565 -08 000000028 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:53.565 -08 000000028 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:53.566 -08 000000052 INF: ======================================
17-02-28 20:15:53.626 -08 000000028 INF: Y Motor: Recv ok\r
17-02-28 20:15:53.626 -08 000000028 INF: ======================================
17-02-28 20:15:53.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:15:53.686 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.686 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:15:53.709 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.709 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:15:53.739 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.740 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:15:53.763 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.763 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:53.764 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:53.764 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:15:53.772 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:53.772 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:15:53.773 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:15:54.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:54.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 2 of 5 seconds left===================
17-02-28 20:15:54.410 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:15:54.434 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0624920783796801Best Z position at top surface = -0.132694111384319Best Z position at top surface + compensator offset = -0.109994111384319 C:3,L:7,T
17-02-28 20:15:54.435 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.132694111384319
17-02-28 20:15:54.435 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.78251
17-02-28 20:15:54.435 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0624920783796801
17-02-28 20:15:54.435 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.44441
17-02-28 20:15:54.435 -08 000000018 INF: Z-height at LaneTopSurface is -0.132694111384319.
17-02-28 20:15:54.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:54.568 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:15:54.568 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:15:54.622 -08 000000025 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:54.622 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:54.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.624 -08 000000018 INF: Lane 7, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:15:54.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.625 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.626 -08 000000059 INF: ===================Move Tilt Motor 1===================
17-02-28 20:15:54.626 -08 000000023 INF: ===================Move Tilt Motor 2===================
17-02-28 20:15:54.626 -08 000000028 INF: ===================Move Tilt Motor 3===================
17-02-28 20:15:54.626 -08 000000023 INF: ======================================
17-02-28 20:15:54.626 -08 000000028 INF: ======================================
17-02-28 20:15:54.627 -08 000000059 INF: ======================================
17-02-28 20:15:54.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.629 -08 000000018 INF: ETF Best Z: -0.1099941 mm (28834 DAC)
17-02-28 20:15:54.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.630 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.630 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:15:54.630 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:15:55.031 -08 000000047 INF: FPGA: Recv MIOCOMPF
17-02-28 20:15:55.031 -08 000000018 INF: Compensator: Moved IntoPath in 401 ms
17-02-28 20:15:55.032 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:55.033 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:55.039 -08 000000018 INF: Swath 1 position calculated to be: {X=22.17493, Y=39.70011} from estimated center X= 22.652, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:15:55.039 -08 000000018 INF: Swath 2 position calculated to be: {X=23.28293, Y=39.70011} from estimated center X= 22.652, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:15:55.045 -08 000000018 INF: Swath 0: Converted transform from (64.31781, -13.83717) pixels to (0.02208, -0.00483) mm.
17-02-28 20:15:55.050 -08 000000018 INF: Swath 1: Converted transform from (47.2242, -10.16882) pixels to (0.016215, -0.00345) mm.
17-02-28 20:15:55.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011===================
17-02-28 20:15:55.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011===================
17-02-28 20:15:55.051 -08 000000018 INF: Transformed XStagePosition from 22.17493 mm to 22.1970105729997 mm.
17-02-28 20:15:55.063 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4852863330171 mm.
17-02-28 20:15:55.063 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2852863330171 mm.
17-02-28 20:15:55.063 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.376036333017 mm.
17-02-28 20:15:55.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:55.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:15:55.066 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:55.066 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = G_1
17-02-28 20:15:55.072 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:55.073 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:55.074 -08 000000050 INF: ===================MoveEmissionFilters===================
17-02-28 20:15:55.074 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:55.074 -08 000000032 INF: ===================Move X,Y===================
17-02-28 20:15:55.074 -08 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:55.074 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:15:55.074 -08 000000059 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:55.075 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:55.075 -08 000000032 INF: ===================Move X,Y, Parallel===================
17-02-28 20:15:55.075 -08 000000071 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:55.075 -08 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:55.075 -08 000000059 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:55.075 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:55.075 -08 000000071 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:55.076 -08 000000064 INF: ===================Move X Motor without settling===================
17-02-28 20:15:55.076 -08 000000030 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:55.076 -08 000000064 INF: X Motor: Xmit PR VM\n
17-02-28 20:15:55.076 -08 000000098 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:15:55.076 -08 000000038 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:15:55.076 -08 000000075 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:15:55.076 -08 000000095 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:15:55.076 -08 000000053 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:15:55.076 -08 000000089 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:15:55.076 -08 000000106 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:15:55.076 -08 000000098 INF: ======================================
17-02-28 20:15:55.076 -08 000000010 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:15:55.077 -08 000000106 INF: ======================================
17-02-28 20:15:55.077 -08 000000095 INF: ======================================
17-02-28 20:15:55.077 -08 000000089 INF: ======================================
17-02-28 20:15:55.078 -08 000000053 INF: ======================================
17-02-28 20:15:55.078 -08 000000010 INF: ======================================
17-02-28 20:15:55.078 -08 000000075 INF: ======================================
17-02-28 20:15:55.078 -08 000000071 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:55.078 -08 000000046 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:15:55.078 -08 000000046 INF: Z Motor: Moving to -0.1300 mm, started at -0.0100 mm
17-02-28 20:15:55.078 -08 000000046 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:15:55.079 -08 000000030 INF: Y Motor: Moving to 64.4853 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:15:55.079 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:55.079 -08 000000038 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:15:55.079 -08 000000059 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:55.079 -08 000000071 INF: ======================================
17-02-28 20:15:55.080 -08 000000038 INF: ======================================
17-02-28 20:15:55.080 -08 000000051 INF: ======================================
17-02-28 20:15:55.080 -08 000000059 INF: ======================================
17-02-28 20:15:55.081 -08 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:55.082 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:55.082 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:55.082 -08 000000028 INF: ======================================
17-02-28 20:15:55.083 -08 000000050 INF: ======================================
17-02-28 20:15:55.152 -08 000000082 INF: FPGA: Recv ZTRG 
17-02-28 20:15:55.152 -08 000000046 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:15:55.154 -08 000000064 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:15:55.154 -08 000000064 INF: X Motor: Xmit PR VI\n
17-02-28 20:15:55.155 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:15:55.155 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:55.155 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:55.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:55.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 1 of 5 seconds left===================
17-02-28 20:15:55.214 -08 000000074 INF: FPGA: Recv ZYT 
17-02-28 20:15:55.214 -08 000000046 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:15:55.214 -08 000000046 INF: FPGA: Xmit ZMV 34077\n
17-02-28 20:15:55.216 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:15:55.216 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:55.217 -08 000000064 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:15:55.217 -08 000000064 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:15:55.217 -08 000000064 INF: X Motor: Moving to 22.1970 mm @15.000 mm/sec, started at 22.7280 mm
17-02-28 20:15:55.217 -08 000000064 INF: X Motor: Xmit MA -15075\n
17-02-28 20:15:55.276 -08 000000071 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:15:55.276 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:15:55.278 -08 000000064 INF: X Motor: Recv MA -15075\r\n>
17-02-28 20:15:55.278 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:15:55.278 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:55.278 -08 000000064 INF: X Motor: WaitUntilStopped 60035
17-02-28 20:15:55.278 -08 000000030 INF: Y Motor: Set target position to 5948529 encoder counts
17-02-28 20:15:55.278 -08 000000030 INF: Y Motor: Xmit s r0xca 5948529\r
17-02-28 20:15:55.343 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:15:55.343 -08 000000030 INF: Y Motor: Start the move command
17-02-28 20:15:55.343 -08 000000030 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:55.403 -08 000000023 INF: FPGA: Recv ZMV 
17-02-28 20:15:55.403 -08 000000046 INF: Z Motor: MoveAndTrigger 'ZMV' command took 188.862 ms
17-02-28 20:15:55.403 -08 000000046 INF: FPGA: Xmit ZDACR\n
17-02-28 20:15:55.405 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:15:55.405 -08 000000030 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:15:55.405 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:55.465 -08 000000025 INF: FPGA: Recv ZDACR 34077
17-02-28 20:15:55.465 -08 000000046 INF: Z Motor: MoveAndTrigger took 386.6525 ms w/comms
17-02-28 20:15:55.465 -08 000000046 INF: Z Motor: After move to -0.1300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:15:55.465 -08 000000046 INF: Z Motor: MoveAbsStepped took 386.8331 ms
17-02-28 20:15:55.465 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:55.467 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:15:55.468 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:55.468 -08 000000084 INF: ===================Camera Arm TDI===================
17-02-28 20:15:55.468 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:55.469 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:55.469 -08 000000075 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:15:55.469 -08 000000084 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:55.470 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:55.470 -08 000000075 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:15:55.527 -08 000000038 INF: FPGA: Recv ZSEL 
17-02-28 20:15:55.528 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:55.528 -08 000000075 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:15:55.529 -08 000000030 INF: Y Motor: Unshifted Position: 5871800
17-02-28 20:15:55.579 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:55.589 -08 000000074 INF: FPGA: Recv TDIBB
17-02-28 20:15:55.589 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:55.590 -08 000000075 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:15:55.591 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:55.592 -08 000000075 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:15:55.592 -08 000000075 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:15:55.592 -08 000000075 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:15:55.651 -08 000000090 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:55.651 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:55.653 -08 000000075 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:15:55.654 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:55.655 -08 000000075 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:15:55.655 -08 000000075 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:15:55.655 -08 000000075 INF: Z Motor: Arming to move to -0.0900 mm
17-02-28 20:15:55.655 -08 000000075 INF: FPGA: Xmit ZYT 6428529 4\n
17-02-28 20:15:55.703 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:55.713 -08 000000106 INF: FPGA: Recv ZYT 
17-02-28 20:15:55.713 -08 000000075 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6371800 enc / 63.718 mm / ) = 6428529 enc / 64.285 mm
17-02-28 20:15:55.713 -08 000000075 INF: FPGA: Xmit ZARM 23591\n
17-02-28 20:15:55.715 -08 000000064 INF: X Motor: Xmit PR ER\n
17-02-28 20:15:55.775 -08 000000098 INF: FPGA: Recv ZARM
17-02-28 20:15:55.775 -08 000000075 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.6683 ms
17-02-28 20:15:55.775 -08 000000075 INF: Z Motor: ArmAbsStepped took 119.3984 ms
17-02-28 20:15:55.775 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:55.777 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:55.778 -08 000000064 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:15:55.778 -08 000000064 INF: X Motor: Moved to 22.1958 after 499 ms
17-02-28 20:15:55.778 -08 000000064 INF: ======================================
17-02-28 20:15:55.778 -08 000000075 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:15:55.779 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:55.780 -08 000000075 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:15:55.781 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:55.782 -08 000000075 INF: ======================================
17-02-28 20:15:55.842 -08 000000030 INF: Y Motor: Unshifted Position: 5948529
17-02-28 20:15:55.842 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:55.842 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:55.904 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:15:55.904 -08 000000030 INF: Y Motor: Moved to 64.4853 after 498 ms
17-02-28 20:15:55.904 -08 000000030 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:55.966 -08 000000030 INF: Y Motor: Recv v 4096\r
17-02-28 20:15:55.966 -08 000000030 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:55.966 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:56.028 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:15:56.028 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:56.028 -08 000000030 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:56.089 -08 000000030 INF: Y Motor: Recv v 402653184\r
17-02-28 20:15:56.089 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:15:56.089 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:56.089 -08 000000030 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:56.154 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:15:56.154 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:56.154 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:56.154 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:56.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:56.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:56.194 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:15:56.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:56.216 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:15:56.216 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:56.216 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:56.279 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:15:56.279 -08 000000030 INF: ======================================
17-02-28 20:15:56.280 -08 000000032 INF: ===================Move X,Y===================
17-02-28 20:15:56.281 -08 000000032 INF: ======================================
17-02-28 20:15:56.293 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:15:56.340 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`2304 (0x03)\r\n(0xFF)
17-02-28 20:15:56.340 -08 000000042 INF: Current Position of Pump is: 2304
17-02-28 20:15:56.396 -08 000000084 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:15:56.396 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:15:56.396 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:56.411 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:56.413 -08 000000084 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:56.433 -08 000000050 INF: RunCopyService queue size at 2/28/2017 8:15:56 PM is 2
17-02-28 20:15:56.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:15:56.528 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`2304 (0x03)\r\n(0xFF)
17-02-28 20:15:56.528 -08 000000042 INF: Current Position of Pump is: 2304
17-02-28 20:15:56.528 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC===================
17-02-28 20:15:56.628 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD2304R\r
17-02-28 20:15:56.714 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:56.814 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:56.900 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:57.150 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:57.214 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:57.464 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:57.468 -08 000000084 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:15:57.468 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:15:57.468 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:57.484 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:57.486 -08 000000084 INF: ===================Camera Arm TDI===================
17-02-28 20:15:57.487 -08 000000084 INF: ======================================
17-02-28 20:15:57.488 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:57.489 -08 000000046 INF: ======================================
17-02-28 20:15:57.490 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:57.491 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:57.491 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:15:57.491 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:15:57.524 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:57.524 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:57.524 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:15:57.525 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:57.525 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:15:57.590 -08 000000038 INF: FPGA: Recv ZFREQCL
17-02-28 20:15:57.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:15:57.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:57.591 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:57.650 -08 000000010 INF: FPGA: Recv TDIYERD 6448531
17-02-28 20:15:57.650 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448531 counts (64.485 mm)
17-02-28 20:15:57.650 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:57.651 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:57.652 -08 000000037 INF: ===================Set YMotor gains for scans===================
17-02-28 20:15:57.652 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:57.652 -08 000000037 INF: ======================================
17-02-28 20:15:57.652 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:57.653 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:15:57.653 -08 000000053 INF: FPGA: Xmit TDIYPOS 6337604\n
17-02-28 20:15:57.712 -08 000000099 INF: FPGA: Recv TDIYPOS
17-02-28 20:15:57.712 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:57.714 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:15:57.714 -08 000000053 INF: FPGA: Xmit TDIYARM3 139264 6428529 1 1\n
17-02-28 20:15:57.774 -08 000000082 INF: FPGA: Recv TDIYARM3
17-02-28 20:15:57.774 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:57.775 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:57.776 -08 000000053 INF: ======================================
17-02-28 20:15:57.777 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:57.778 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:57.778 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:57.778 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:57.779 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:57.780 -08 000000084 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:15:57.780 -08 000000059 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:15:57.780 -08 000000084 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:15:57.780 -08 000000084 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:15:57.780 -08 000000084 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:15:57.780 -08 000000059 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:15:57.780 -08 000000059 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:15:57.780 -08 000000059 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:15:57.780 -08 000000084 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:15:57.781 -08 000000059 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:15:58.149 -08 000000089 INF: FPGA: Recv EX1MV
17-02-28 20:15:58.149 -08 000000089 INF: FPGA: Recv EX2MV
17-02-28 20:15:58.149 -08 000000059 INF: Excitation Filter 2: Moved -107 steps in 368.8486 ms
17-02-28 20:15:58.149 -08 000000084 INF: Excitation Filter 1: Moved -107 steps in 368.9569 ms
17-02-28 20:15:58.149 -08 000000059 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.9402 ms
17-02-28 20:15:58.149 -08 000000059 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.1318 ms
17-02-28 20:15:58.149 -08 000000084 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.077 ms
17-02-28 20:15:58.149 -08 000000084 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.4618 ms
17-02-28 20:15:58.149 -08 000000059 INF: ======================================
17-02-28 20:15:58.150 -08 000000084 INF: ======================================
17-02-28 20:15:58.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:58.152 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:58.153 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:15:58.153 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:58.153 -08 000000046 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:58.153 -08 000000038 INF: ===================FPGA Z Wait===================
17-02-28 20:15:58.153 -08 000000046 INF: Y Motor: Moving to 14.8369 mm @6.500 mm/sec, started at 64.4853 mm
17-02-28 20:15:58.153 -08 000000038 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:15:58.153 -08 000000046 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:58.153 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:58.153 -08 000000047 INF: ===================Camera TDI, Parallel===================
17-02-28 20:15:58.153 -08 000000010 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:15:58.154 -08 000000010 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:15:58.154 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:15:58.154 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:15:58.156 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:58.156 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:58.156 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:58.156 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:58.213 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:15:58.213 -08 000000046 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:58.213 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:58.275 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:15:58.275 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:58.306 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:58.306 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:58.306 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:58.306 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:58.337 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:15:58.337 -08 000000046 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:58.337 -08 000000046 INF: Y Motor: Set target position to 983695 encoder counts
17-02-28 20:15:58.337 -08 000000046 INF: Y Motor: Xmit s r0xca 983695\r
17-02-28 20:15:58.399 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:15:58.399 -08 000000046 INF: Y Motor: Start the move command
17-02-28 20:15:58.399 -08 000000046 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:58.456 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:58.456 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:58.456 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:58.456 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:58.461 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:15:58.461 -08 000000046 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:15:58.461 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:58.524 -08 000000052 INF: FPGA: Recv ZWAIT 
17-02-28 20:15:58.524 -08 000000038 INF: ======================================
17-02-28 20:15:58.590 -08 000000046 INF: Y Motor: Unshifted Position: 5884720
17-02-28 20:15:58.606 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:58.606 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:58.606 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:58.606 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:58.606 -08 000000064 INF: ===================Camera #2 Frame #5===================
17-02-28 20:15:58.606 -08 000000051 INF: ===================Camera #0 Frame #5===================
17-02-28 20:15:58.624 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:15:58.640 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:58.713 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:58.764 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:58.771 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:58.771 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:58.771 -08 000000051 INF: ===================Camera #0 Frame #11===================
17-02-28 20:15:58.772 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:58.772 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:58.772 -08 000000064 INF: ===================Camera #2 Frame #11===================
17-02-28 20:15:58.813 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:58.897 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:58.899 -08 000000046 INF: Y Motor: Unshifted Position: 5683224
17-02-28 20:15:58.939 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:58.939 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:58.939 -08 000000051 INF: ===================Camera #0 Frame #17===================
17-02-28 20:15:58.941 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:58.941 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:58.941 -08 000000064 INF: ===================Camera #2 Frame #17===================
17-02-28 20:15:58.949 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.075 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.107 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:15:59.107 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:15:59.107 -08 000000051 INF: ===================Camera #0 Frame #23===================
17-02-28 20:15:59.110 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:15:59.110 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:15:59.110 -08 000000064 INF: ===================Camera #2 Frame #23===================
17-02-28 20:15:59.147 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:59.213 -08 000000046 INF: Y Motor: Unshifted Position: 5478917
17-02-28 20:15:59.213 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:59.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:59.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:15:59.263 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.275 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:15:59.275 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:15:59.275 -08 000000051 INF: ===================Camera #0 Frame #29===================
17-02-28 20:15:59.279 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:15:59.279 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:15:59.279 -08 000000064 INF: ===================Camera #2 Frame #29===================
17-02-28 20:15:59.386 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.443 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:15:59.443 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:15:59.443 -08 000000051 INF: ===================Camera #0 Frame #35===================
17-02-28 20:15:59.448 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:15:59.448 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:15:59.448 -08 000000064 INF: ===================Camera #2 Frame #36===================
17-02-28 20:15:59.522 -08 000000046 INF: Y Motor: Unshifted Position: 5277408
17-02-28 20:15:59.572 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.581 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:59.582 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:59.582 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:59.582 -08 000000042 INF: WaitCommand(30000) start
17-02-28 20:15:59.582 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 30 of 30 seconds left===================
17-02-28 20:15:59.611 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:15:59.611 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:15:59.611 -08 000000051 INF: ===================Camera #0 Frame #42===================
17-02-28 20:15:59.621 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:15:59.621 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:15:59.621 -08 000000064 INF: ===================Camera #2 Frame #42===================
17-02-28 20:15:59.699 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.783 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:15:59.783 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:15:59.783 -08 000000051 INF: ===================Camera #0 Frame #48===================
17-02-28 20:15:59.791 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:15:59.791 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:15:59.791 -08 000000064 INF: ===================Camera #2 Frame #48===================
17-02-28 20:15:59.835 -08 000000046 INF: Y Motor: Unshifted Position: 5073744
17-02-28 20:15:59.885 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.952 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:15:59.952 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:15:59.952 -08 000000051 INF: ===================Camera #0 Frame #54===================
17-02-28 20:15:59.961 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:15:59.962 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:15:59.962 -08 000000064 INF: ===================Camera #2 Frame #55===================
17-02-28 20:16:00.009 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.121 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:16:00.121 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:16:00.121 -08 000000051 INF: ===================Camera #0 Frame #60===================
17-02-28 20:16:00.135 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:16:00.135 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:16:00.135 -08 000000064 INF: ===================Camera #2 Frame #61===================
17-02-28 20:16:00.146 -08 000000046 INF: Y Motor: Unshifted Position: 4870298
17-02-28 20:16:00.196 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.290 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:16:00.290 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:16:00.290 -08 000000051 INF: ===================Camera #0 Frame #67===================
17-02-28 20:16:00.305 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:16:00.305 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:16:00.305 -08 000000064 INF: ===================Camera #2 Frame #67===================
17-02-28 20:16:00.323 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.461 -08 000000046 INF: Y Motor: Unshifted Position: 4667279
17-02-28 20:16:00.462 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:16:00.462 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:16:00.462 -08 000000051 INF: ===================Camera #0 Frame #73===================
17-02-28 20:16:00.475 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:16:00.475 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:16:00.475 -08 000000064 INF: ===================Camera #2 Frame #73===================
17-02-28 20:16:00.511 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:00.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 29 of 30 seconds left===================
17-02-28 20:16:00.631 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:16:00.631 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:16:00.631 -08 000000051 INF: ===================Camera #0 Frame #79===================
17-02-28 20:16:00.635 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.645 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:16:00.645 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:16:00.645 -08 000000064 INF: ===================Camera #2 Frame #80===================
17-02-28 20:16:00.772 -08 000000046 INF: Y Motor: Unshifted Position: 4464464
17-02-28 20:16:00.800 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:16:00.800 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:16:00.800 -08 000000051 INF: ===================Camera #0 Frame #85===================
17-02-28 20:16:00.819 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:16:00.819 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:16:00.819 -08 000000064 INF: ===================Camera #2 Frame #86===================
17-02-28 20:16:00.822 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.946 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.970 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:16:00.970 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:16:00.970 -08 000000051 INF: ===================Camera #0 Frame #92===================
17-02-28 20:16:00.990 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:16:00.990 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:16:00.990 -08 000000064 INF: ===================Camera #2 Frame #92===================
17-02-28 20:16:01.082 -08 000000046 INF: Y Motor: Unshifted Position: 4262755
17-02-28 20:16:01.132 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:01.143 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:16:01.143 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:16:01.143 -08 000000051 INF: ===================Camera #0 Frame #98===================
17-02-28 20:16:01.161 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:16:01.161 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:16:01.161 -08 000000064 INF: ===================Camera #2 Frame #99===================
17-02-28 20:16:01.261 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:01.313 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:16:01.313 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:16:01.313 -08 000000051 INF: ===================Camera #0 Frame #104===================
17-02-28 20:16:01.335 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:16:01.335 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:16:01.335 -08 000000064 INF: ===================Camera #2 Frame #105===================
17-02-28 20:16:01.395 -08 000000046 INF: Y Motor: Unshifted Position: 4059296
17-02-28 20:16:01.445 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:01.483 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:16:01.483 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:16:01.483 -08 000000051 INF: ===================Camera #0 Frame #111===================
17-02-28 20:16:01.506 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:16:01.506 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:16:01.506 -08 000000064 INF: ===================Camera #2 Frame #111===================
17-02-28 20:16:01.569 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:01.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:01.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 28 of 30 seconds left===================
17-02-28 20:16:01.656 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:16:01.656 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:16:01.656 -08 000000051 INF: ===================Camera #0 Frame #117===================
17-02-28 20:16:01.677 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:16:01.677 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:16:01.677 -08 000000064 INF: ===================Camera #2 Frame #118===================
17-02-28 20:16:01.708 -08 000000046 INF: Y Motor: Unshifted Position: 3854981
17-02-28 20:16:01.758 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:01.826 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:16:01.826 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:16:01.826 -08 000000051 INF: ===================Camera #0 Frame #123===================
17-02-28 20:16:01.851 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:16:01.851 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:16:01.851 -08 000000064 INF: ===================Camera #2 Frame #124===================
17-02-28 20:16:01.883 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:01.994 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:16:01.994 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:16:01.994 -08 000000051 INF: ===================Camera #0 Frame #129===================
17-02-28 20:16:02.018 -08 000000046 INF: Y Motor: Unshifted Position: 3652829
17-02-28 20:16:02.022 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:16:02.022 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:16:02.022 -08 000000064 INF: ===================Camera #2 Frame #130===================
17-02-28 20:16:02.068 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:02.164 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:16:02.164 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:16:02.164 -08 000000051 INF: ===================Camera #0 Frame #136===================
17-02-28 20:16:02.193 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:16:02.193 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:16:02.193 -08 000000064 INF: ===================Camera #2 Frame #137===================
17-02-28 20:16:02.195 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:02.330 -08 000000046 INF: Y Motor: Unshifted Position: 3451111
17-02-28 20:16:02.337 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:16:02.337 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:16:02.337 -08 000000051 INF: ===================Camera #0 Frame #142===================
17-02-28 20:16:02.367 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:16:02.367 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:16:02.367 -08 000000064 INF: ===================Camera #2 Frame #143===================
17-02-28 20:16:02.380 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:02.507 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:02.507 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:16:02.507 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:16:02.507 -08 000000051 INF: ===================Camera #0 Frame #148===================
17-02-28 20:16:02.538 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:16:02.538 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:16:02.538 -08 000000064 INF: ===================Camera #2 Frame #149===================
17-02-28 20:16:02.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:02.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 27 of 30 seconds left===================
17-02-28 20:16:02.643 -08 000000046 INF: Y Motor: Unshifted Position: 3247660
17-02-28 20:16:02.677 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:16:02.677 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:16:02.677 -08 000000051 INF: ===================Camera #0 Frame #154===================
17-02-28 20:16:02.693 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:02.709 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:16:02.709 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:16:02.709 -08 000000064 INF: ===================Camera #2 Frame #156===================
17-02-28 20:16:02.817 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:02.847 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:16:02.847 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:16:02.847 -08 000000051 INF: ===================Camera #0 Frame #161===================
17-02-28 20:16:02.883 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:16:02.883 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:16:02.883 -08 000000064 INF: ===================Camera #2 Frame #162===================
17-02-28 20:16:02.956 -08 000000046 INF: Y Motor: Unshifted Position: 3044007
17-02-28 20:16:03.006 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:03.020 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:16:03.020 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:16:03.020 -08 000000051 INF: ===================Camera #0 Frame #167===================
17-02-28 20:16:03.054 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:16:03.054 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:16:03.054 -08 000000064 INF: ===================Camera #2 Frame #168===================
17-02-28 20:16:03.132 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:03.190 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:16:03.190 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:16:03.190 -08 000000051 INF: ===================Camera #0 Frame #173===================
17-02-28 20:16:03.225 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:16:03.225 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:16:03.225 -08 000000064 INF: ===================Camera #2 Frame #175===================
17-02-28 20:16:03.271 -08 000000046 INF: Y Motor: Unshifted Position: 2841209
17-02-28 20:16:03.321 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:03.360 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:16:03.360 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:16:03.360 -08 000000051 INF: ===================Camera #0 Frame #180===================
17-02-28 20:16:03.399 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:16:03.399 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:16:03.399 -08 000000064 INF: ===================Camera #2 Frame #181===================
17-02-28 20:16:03.442 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:03.533 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:16:03.533 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:16:03.533 -08 000000051 INF: ===================Camera #0 Frame #186===================
17-02-28 20:16:03.570 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:16:03.570 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:16:03.570 -08 000000064 INF: ===================Camera #2 Frame #187===================
17-02-28 20:16:03.580 -08 000000046 INF: Y Motor: Unshifted Position: 2639487
17-02-28 20:16:03.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:03.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 26 of 30 seconds left===================
17-02-28 20:16:03.630 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:03.703 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:16:03.703 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:16:03.703 -08 000000051 INF: ===================Camera #0 Frame #192===================
17-02-28 20:16:03.741 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:16:03.741 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:16:03.741 -08 000000064 INF: ===================Camera #2 Frame #194===================
17-02-28 20:16:03.755 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:03.871 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:16:03.871 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:16:03.871 -08 000000051 INF: ===================Camera #0 Frame #198===================
17-02-28 20:16:03.891 -08 000000046 INF: Y Motor: Unshifted Position: 2434748
17-02-28 20:16:03.915 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:16:03.915 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:16:03.915 -08 000000064 INF: ===================Camera #2 Frame #200===================
17-02-28 20:16:03.941 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.041 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:16:04.041 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:16:04.041 -08 000000051 INF: ===================Camera #0 Frame #205===================
17-02-28 20:16:04.065 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.086 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:16:04.086 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:16:04.086 -08 000000064 INF: ===================Camera #2 Frame #206===================
17-02-28 20:16:04.202 -08 000000046 INF: Y Motor: Unshifted Position: 2234329
17-02-28 20:16:04.214 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:16:04.214 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:16:04.214 -08 000000051 INF: ===================Camera #0 Frame #211===================
17-02-28 20:16:04.252 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.255 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:16:04.255 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:16:04.255 -08 000000064 INF: ===================Camera #2 Frame #213===================
17-02-28 20:16:04.379 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.384 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:16:04.384 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:16:04.384 -08 000000051 INF: ===================Camera #0 Frame #217===================
17-02-28 20:16:04.430 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:16:04.430 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:16:04.430 -08 000000064 INF: ===================Camera #2 Frame #219===================
17-02-28 20:16:04.515 -08 000000046 INF: Y Motor: Unshifted Position: 2030228
17-02-28 20:16:04.554 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:16:04.554 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:16:04.554 -08 000000051 INF: ===================Camera #0 Frame #224===================
17-02-28 20:16:04.565 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:04.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 25 of 30 seconds left===================
17-02-28 20:16:04.601 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:16:04.601 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:16:04.601 -08 000000064 INF: ===================Camera #2 Frame #225===================
17-02-28 20:16:04.689 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.727 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:16:04.727 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:16:04.727 -08 000000051 INF: ===================Camera #0 Frame #230===================
17-02-28 20:16:04.772 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:16:04.772 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:16:04.772 -08 000000064 INF: ===================Camera #2 Frame #232===================
17-02-28 20:16:04.829 -08 000000046 INF: Y Motor: Unshifted Position: 1828507
17-02-28 20:16:04.879 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.897 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:16:04.897 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:16:04.897 -08 000000051 INF: ===================Camera #0 Frame #236===================
17-02-28 20:16:04.946 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:16:04.946 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:16:04.946 -08 000000064 INF: ===================Camera #2 Frame #238===================
17-02-28 20:16:05.003 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:05.067 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:16:05.067 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:16:05.067 -08 000000051 INF: ===================Camera #0 Frame #242===================
17-02-28 20:16:05.117 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:16:05.117 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:16:05.117 -08 000000064 INF: ===================Camera #2 Frame #244===================
17-02-28 20:16:05.139 -08 000000046 INF: Y Motor: Unshifted Position: 1624412
17-02-28 20:16:05.189 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:05.237 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:16:05.237 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:16:05.237 -08 000000051 INF: ===================Camera #0 Frame #249===================
17-02-28 20:16:05.288 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:16:05.288 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:16:05.288 -08 000000064 INF: ===================Camera #2 Frame #251===================
17-02-28 20:16:05.315 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:05.410 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:16:05.410 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:16:05.410 -08 000000051 INF: ===================Camera #0 Frame #255===================
17-02-28 20:16:05.451 -08 000000046 INF: Y Motor: Unshifted Position: 1421385
17-02-28 20:16:05.462 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:16:05.462 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:16:05.462 -08 000000064 INF: ===================Camera #2 Frame #257===================
17-02-28 20:16:05.501 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:05.580 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:16:05.580 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:16:05.580 -08 000000051 INF: ===================Camera #0 Frame #261===================
17-02-28 20:16:05.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:05.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 24 of 30 seconds left===================
17-02-28 20:16:05.626 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:05.633 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:16:05.633 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:16:05.633 -08 000000064 INF: ===================Camera #2 Frame #263===================
17-02-28 20:16:05.749 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:16:05.749 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:16:05.749 -08 000000051 INF: ===================Camera #0 Frame #268===================
17-02-28 20:16:05.765 -08 000000046 INF: Y Motor: Unshifted Position: 1219882
17-02-28 20:16:05.804 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:16:05.804 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:16:05.804 -08 000000064 INF: ===================Camera #2 Frame #270===================
17-02-28 20:16:05.815 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:05.887 -08 000000050 INF: FPGA: Recv TDIYWAIT
17-02-28 20:16:05.887 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:05.889 -08 000000010 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:16:05.890 -08 000000044 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:16:05.890 -08 000000052 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:16:05.890 -08 000000044 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:16:05.890 -08 000000044 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:16:05.890 -08 000000044 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:16:05.890 -08 000000044 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:16:05.890 -08 000000052 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:16:05.890 -08 000000052 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:16:05.890 -08 000000052 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:16:05.891 -08 000000052 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:16:05.921 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:05.921 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:05.921 -08 000000051 INF: ===================Camera #0 Frame #272===================
17-02-28 20:16:05.934 -08 000000051 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:05.935 -08 000000051 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:05.939 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:06.075 -08 000000046 INF: Y Motor: Unshifted Position: 1015570
17-02-28 20:16:06.097 -08 000000051 INF: Camera #0 ReleaseBuffer
17-02-28 20:16:06.097 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:06.097 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:06.097 -08 000000064 INF: ===================Camera #2 Frame #272===================
17-02-28 20:16:06.097 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:16:06.103 -08 000000064 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:06.104 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:06.125 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:06.129 -08 000000051 INF: ======================================
17-02-28 20:16:06.262 -08 000000037 INF: FPGA: Recv EX1MV
17-02-28 20:16:06.262 -08 000000037 INF: FPGA: Recv EX2MV
17-02-28 20:16:06.262 -08 000000052 INF: Excitation Filter 2: Moved 107 steps in 371.0452 ms
17-02-28 20:16:06.262 -08 000000044 INF: Excitation Filter 1: Moved 107 steps in 371.2508 ms
17-02-28 20:16:06.262 -08 000000044 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.3957 ms
17-02-28 20:16:06.262 -08 000000044 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.463 ms
17-02-28 20:16:06.262 -08 000000052 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.1528 ms
17-02-28 20:16:06.262 -08 000000052 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.5249 ms
17-02-28 20:16:06.263 -08 000000044 INF: ======================================
17-02-28 20:16:06.263 -08 000000052 INF: ======================================
17-02-28 20:16:06.264 -08 000000046 INF: Y Motor: Unshifted Position: 983693
17-02-28 20:16:06.264 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:06.264 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:06.264 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:06.265 -08 000000010 INF: ======================================
17-02-28 20:16:06.305 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:16:06.305 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:16:06.326 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:16:06.326 -08 000000046 INF: Y Motor: Moved to 14.8369 after 7864 ms
17-02-28 20:16:06.326 -08 000000046 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:06.340 -08 000000064 INF: ======================================
17-02-28 20:16:06.341 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:16:06.342 -08 000000047 INF: ======================================
17-02-28 20:16:06.388 -08 000000046 INF: Y Motor: Recv v 4097\r
17-02-28 20:16:06.388 -08 000000046 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:06.388 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:06.450 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:16:06.450 -08 000000046 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:06.450 -08 000000046 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:06.512 -08 000000046 INF: Y Motor: Recv v 134217728\r
17-02-28 20:16:06.512 -08 000000046 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:16:06.512 -08 000000046 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:06.512 -08 000000046 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:06.574 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:16:06.574 -08 000000046 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:06.574 -08 000000046 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:06.574 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:06.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:06.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 23 of 30 seconds left===================
17-02-28 20:16:06.636 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:16:06.636 -08 000000046 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:06.636 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:06.702 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:16:06.702 -08 000000046 INF: ======================================
17-02-28 20:16:06.703 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:06.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:06.705 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:06.705 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:16:06.759 -08 000000101 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:16:06.759 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:06.824 -08 000000053 INF: FPGA: Recv TDIYERD 1483695
17-02-28 20:16:06.824 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:16:06.886 -08 000000047 INF: FPGA: Recv ZADCR 34120
17-02-28 20:16:06.886 -08 000000018 INF: At scan end Y pos = 14.837 and Z pos = -0.131. Y moved -48.539 mm
17-02-28 20:16:06.886 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:16:06.949 -08 000000032 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:16:06.949 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:16:06.949 -08 000000018 INF: TDIScan finished after 11895.9656 ms
17-02-28 20:16:06.949 -08 000000018 INF: Image[0]: Y should trigger at 63.376 mm, 2nd row was at 64.285 mm (error = 0.909 mm)
17-02-28 20:16:06.949 -08 000000018 INF: Image[2]: Y should trigger at 63.376 mm, 2nd row was at 64.285 mm (error = 0.909 mm)
17-02-28 20:16:06.951 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:06.985 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.764 um
17-02-28 20:16:06.985 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:06.986 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:16:07.010 -08 000000101 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:16:07.010 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.011 -08 000000058 INF: ===================Dither Clean Up Command===================
17-02-28 20:16:07.011 -08 000000030 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:16:07.011 -08 000000084 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:16:07.011 -08 000000025 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:16:07.012 -08 000000025 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:16:07.012 -08 000000030 INF: ======================================
17-02-28 20:16:07.012 -08 000000025 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:16:07.012 -08 000000084 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:07.012 -08 000000084 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:07.012 -08 000000098 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:07.012 -08 000000023 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:07.013 -08 000000023 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:16:07.015 -08 000000098 INF: ===================LFT:Extracting coords===================
17-02-28 20:16:07.041 -08 000000098 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:07.042 -08 000000098 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:16:07.043 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.043 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.043 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.043 -08 000000074 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.043 -08 000000075 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:07.043 -08 000000060 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:07.044 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:07.044 -08 000000074 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:07.072 -08 000000106 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:07.072 -08 000000106 INF: FPGA: Recv ZSEL 
17-02-28 20:16:07.072 -08 000000023 INF: FPGA: Xmit ZDACW 34077\n
17-02-28 20:16:07.072 -08 000000025 INF: ======================================
17-02-28 20:16:07.074 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:16:07.074 -08 000000084 INF: ======================================
17-02-28 20:16:07.118 -08 000000075 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:07.118 -08 000000032 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:07.118 -08 000000060 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:07.118 -08 000000074 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:07.135 -08 000000044 INF: FPGA: Recv ZDACW 
17-02-28 20:16:07.135 -08 000000023 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:16:07.136 -08 000000023 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:16:07.196 -08 000000010 INF: FPGA: Recv TDIBB
17-02-28 20:16:07.196 -08 000000023 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:07.197 -08 000000023 INF: ======================================
17-02-28 20:16:07.269 -08 000000075 INF: LFT found best fwhm score 2.000212 in 151 ms
17-02-28 20:16:07.269 -08 000000075 INF: LFT found good score at index 5397 with fwhm value 2.000212. Next cycle, cycle 4 starting Z position for top surface is at -0.133 mm FC:A, C:3,L:7,T
17-02-28 20:16:07.269 -08 000000032 INF: LFT found best fwhm score 2.14221 in 151 ms
17-02-28 20:16:07.269 -08 000000032 INF: LFT found good score at index 2917 with fwhm value 2.14221. Next cycle, cycle 4 starting Z position for top surface is at -0.133 mm FC:A, C:3,L:7,T
17-02-28 20:16:07.269 -08 000000060 INF: LFT found best fwhm score 2.000108 in 151 ms
17-02-28 20:16:07.269 -08 000000060 INF: LFT found good score at index 5357 with fwhm value 2.000108. Next cycle, cycle 4 starting Z position for top surface is at -0.133 mm FC:A, C:3,L:7,T
17-02-28 20:16:07.269 -08 000000074 INF: LFT found best fwhm score 2.000209 in 151 ms
17-02-28 20:16:07.269 -08 000000074 INF: LFT found good score at index 6997 with fwhm value 2.000209. Next cycle, cycle 4 starting Z position for top surface is at -0.133 mm FC:A, C:3,L:7,T
17-02-28 20:16:07.269 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.270 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.270 -08 000000074 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.270 -08 000000032 INF: ======================================
17-02-28 20:16:07.270 -08 000000060 INF: ======================================
17-02-28 20:16:07.270 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.270 -08 000000074 INF: ======================================
17-02-28 20:16:07.270 -08 000000075 INF: ======================================
17-02-28 20:16:07.272 -08 000000098 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:07.272 -08 000000098 INF: LFT weighted average best Z for top surface is at -0.133mm FC:A, C:3,L:7,T
17-02-28 20:16:07.273 -08 000000098 INF: ======================================
17-02-28 20:16:07.274 -08 000000058 INF: ======================================
17-02-28 20:16:07.275 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:16:07.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:16:07.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:16:07.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:16:07.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011===================
17-02-28 20:16:07.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011===================
17-02-28 20:16:07.278 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:16:07.278 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011===================
17-02-28 20:16:07.278 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 23 of 30 seconds left, Waiting for image analysis===================
17-02-28 20:16:07.278 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 23 of 30 seconds left===================
17-02-28 20:16:07.301 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:16:07.301 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:16:07.302 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011===================
17-02-28 20:16:07.302 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.302 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011===================
17-02-28 20:16:07.302 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:16:07.302 -08 000000018 INF: Transformed XStagePosition from 23.28293 mm to 23.2991453744471 mm.
17-02-28 20:16:07.354 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4866663330477 mm.
17-02-28 20:16:07.354 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2866663330477 mm.
17-02-28 20:16:07.354 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3774163330477 mm.
17-02-28 20:16:07.357 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.357 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:16:07.357 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.357 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -130.0 um, section = G_1
17-02-28 20:16:07.359 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:07.359 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:07.363 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":7,"Tile":1101,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF254","HCSMMF230","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.372 -08 000000032 INF: ===================MoveEmissionFilters===================
17-02-28 20:16:07.375 -08 000000079 INF: ===================Move X,Y===================
17-02-28 20:16:07.376 -08 000000079 INF: ===================Move X,Y, Parallel===================
17-02-28 20:16:07.379 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:07.379 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:07.380 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:16:07.380 -08 000000030 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:16:07.380 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:07.380 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:07.380 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:07.381 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:07.382 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:16:07.382 -08 000000037 INF: ===================Move X Motor without settling===================
17-02-28 20:16:07.382 -08 000000037 INF: X Motor: Xmit PR VM\n
17-02-28 20:16:07.383 -08 000000106 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:07.383 -08 000000106 INF: Y Motor: Moving to 64.4867 mm @25.000 mm/sec, started at 14.8369 mm
17-02-28 20:16:07.383 -08 000000106 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:07.383 -08 000000106 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:07.387 -08 000000053 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:07.387 -08 000000045 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:16:07.388 -08 000000045 INF: ======================================
17-02-28 20:16:07.388 -08 000000053 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:07.388 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:16:07.388 -08 000000066 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:16:07.389 -08 000000059 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:07.389 -08 000000047 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:16:07.389 -08 000000066 INF: ======================================
17-02-28 20:16:07.389 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:07.389 -08 000000044 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:16:07.390 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:16:07.390 -08 000000059 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:07.390 -08 000000044 INF: ======================================
17-02-28 20:16:07.390 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:16:07.390 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:07.391 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:07.391 -08 000000066 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:16:07.391 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:07.391 -08 000000089 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:16:07.391 -08 000000047 INF: ======================================
17-02-28 20:16:07.391 -08 000000052 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:16:07.391 -08 000000066 INF: ======================================
17-02-28 20:16:07.392 -08 000000101 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:16:07.392 -08 000000064 INF: ======================================
17-02-28 20:16:07.392 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:07.392 -08 000000052 INF: ======================================
17-02-28 20:16:07.392 -08 000000101 INF: ======================================
17-02-28 20:16:07.393 -08 000000066 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:16:07.393 -08 000000066 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:16:07.393 -08 000000066 INF: ======================================
17-02-28 20:16:07.394 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:07.395 -08 000000059 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:07.395 -08 000000060 INF: ======================================
17-02-28 20:16:07.395 -08 000000053 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:07.396 -08 000000059 INF: ======================================
17-02-28 20:16:07.396 -08 000000053 INF: ======================================
17-02-28 20:16:07.397 -08 000000032 INF: ======================================
17-02-28 20:16:07.415 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":7,"Tile":1106,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF209","HCSMMF275","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.438 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":7,"Tile":1102,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF185","HCSMMF226","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.460 -08 000000060 INF: FPGA: Recv ZSEL 
17-02-28 20:16:07.462 -08 000000037 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:16:07.462 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:07.462 -08 000000106 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:07.462 -08 000000106 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:07.462 -08 000000037 INF: X Motor: Xmit PR VI\n
17-02-28 20:16:07.463 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:07.463 -08 000000089 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:16:07.493 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":7,"Tile":1104,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF200","HCSMMF188","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.494 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":7,"Tile":1105,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF183","HCSMMF257","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.495 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":7,"Tile":1103,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF266","HCSMMF214","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.496 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":7,"Tile":1109,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF282","HCSMMF215","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.497 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":7,"Tile":1113,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF184","HCSMMF197","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.498 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":7,"Tile":1111,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF191","HCSMMF283","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.499 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":7,"Tile":1112,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF211","HCSMMF276","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.500 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":7,"Tile":1110,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF252","HCSMMF251","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.500 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":7,"Tile":1107,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF264","HCSMMF227","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.501 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":7,"Tile":1108,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF241","HCSMMF281","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.502 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":7,"Tile":1115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF232","HCSMMF239","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.503 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":7,"Tile":1114,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF206","HCSMMF255","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.504 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":7,"Tile":1119,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF286","HCSMMF192","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.505 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":7,"Tile":1117,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF237","HCSMMF284","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.506 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":7,"Tile":1120,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF253","HCSMMF216","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.507 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":7,"Tile":1116,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF271","HCSMMF278","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.508 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":7,"Tile":1123,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF268","HCSMMF250","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.509 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":7,"Tile":1125,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF235","HCSMMF220","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.510 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":7,"Tile":1118,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF194","HCSMMF236","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.511 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":7,"Tile":1124,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF279","HCSMMF180","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.512 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:07.512 -08 000000106 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:07.512 -08 000000037 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:16:07.512 -08 000000037 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:16:07.512 -08 000000037 INF: X Motor: Moving to 23.2991 mm @15.000 mm/sec, started at 22.1958 mm
17-02-28 20:16:07.512 -08 000000037 INF: X Motor: Xmit MA -14623\n
17-02-28 20:16:07.512 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":7,"Tile":1121,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF228","HCSMMF256","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.513 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":7,"Tile":1128,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF176","HCSMMF269","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.514 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":7,"Tile":1122,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF233","HCSMMF238","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.516 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":7,"Tile":1126,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF273","HCSMMF186","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.517 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":7,"Tile":1127,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF249","HCSMMF222","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.520 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.525 -08 000000098 INF: FPGA: Recv TDIBB
17-02-28 20:16:07.525 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:07.526 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:16:07.526 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:16:07.527 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:07.528 -08 000000089 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:16:07.528 -08 000000089 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:16:07.529 -08 000000089 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:16:07.573 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:07.573 -08 000000106 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:07.573 -08 000000037 INF: X Motor: Recv MA -14623\r\n>
17-02-28 20:16:07.573 -08 000000106 INF: Y Motor: Set target position to 5948667 encoder counts
17-02-28 20:16:07.573 -08 000000106 INF: Y Motor: Xmit s r0xca 5948667\r
17-02-28 20:16:07.573 -08 000000037 INF: X Motor: WaitUntilStopped 60074
17-02-28 20:16:07.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:07.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 22 of 30 seconds left===================
17-02-28 20:16:07.586 -08 000000066 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:07.586 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:07.588 -08 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:16:07.588 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:07.590 -08 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:16:07.590 -08 000000089 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:16:07.590 -08 000000089 INF: Z Motor: Arming to move to -0.0900 mm
17-02-28 20:16:07.590 -08 000000089 INF: FPGA: Xmit ZYT 6428667 4\n
17-02-28 20:16:07.614 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.615 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:16:07.637 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:07.637 -08 000000106 INF: Y Motor: Start the move command
17-02-28 20:16:07.637 -08 000000106 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:07.648 -08 000000090 INF: FPGA: Recv ZYT 
17-02-28 20:16:07.648 -08 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1483693 enc / 14.837 mm / ) = 6428667 enc / 64.287 mm
17-02-28 20:16:07.648 -08 000000089 INF: FPGA: Xmit ZARM 23591\n
17-02-28 20:16:07.650 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.656 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:16:07.700 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:07.700 -08 000000106 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:16:07.700 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:07.713 -08 000000028 INF: FPGA: Recv ZARM
17-02-28 20:16:07.713 -08 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.913 ms
17-02-28 20:16:07.713 -08 000000089 INF: Z Motor: ArmAbsStepped took 122.8659 ms
17-02-28 20:16:07.713 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:07.714 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:16:07.716 -08 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:16:07.716 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:16:07.718 -08 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:16:07.718 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:16:07.719 -08 000000089 INF: ======================================
17-02-28 20:16:07.745 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.751 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:16:07.823 -08 000000106 INF: Y Motor: Unshifted Position: 1067679
17-02-28 20:16:07.867 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.873 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:07.873 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:16:07.976 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.984 -08 000000045 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:16:07.985 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:16:07.985 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:07.999 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:08.000 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:08.002 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:08.134 -08 000000106 INF: Y Motor: Unshifted Position: 1767855
17-02-28 20:16:08.184 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:08.198 -08 000000037 INF: X Motor: Xmit PR ER\n
17-02-28 20:16:08.259 -08 000000037 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:16:08.259 -08 000000037 INF: X Motor: Moved to 23.2993 after 686 ms
17-02-28 20:16:08.259 -08 000000037 INF: ======================================
17-02-28 20:16:08.273 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:16:08.309 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:08.446 -08 000000106 INF: Y Motor: Unshifted Position: 2556222
17-02-28 20:16:08.496 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:08.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:08.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 21 of 30 seconds left===================
17-02-28 20:16:08.603 -08 000000045 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:16:08.603 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:16:08.603 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:08.618 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:08.620 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:16:08.621 -08 000000045 INF: ======================================
17-02-28 20:16:08.622 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:08.623 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:08.624 -08 000000030 INF: ======================================
17-02-28 20:16:08.760 -08 000000106 INF: Y Motor: Unshifted Position: 3328667
17-02-28 20:16:08.810 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:08.935 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:09.071 -08 000000106 INF: Y Motor: Unshifted Position: 4114563
17-02-28 20:16:09.121 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:09.245 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:09.383 -08 000000106 INF: Y Motor: Unshifted Position: 4894497
17-02-28 20:16:09.433 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:09.557 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:09.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:09.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 20 of 30 seconds left===================
17-02-28 20:16:09.694 -08 000000106 INF: Y Motor: Unshifted Position: 5671583
17-02-28 20:16:09.744 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:09.871 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:10.009 -08 000000106 INF: Y Motor: Unshifted Position: 5948669
17-02-28 20:16:10.009 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:10.009 -08 000000106 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:10.070 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:10.070 -08 000000106 INF: Y Motor: Moved to 64.4867 after 2370 ms
17-02-28 20:16:10.070 -08 000000106 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:10.132 -08 000000106 INF: Y Motor: Recv v 4096\r
17-02-28 20:16:10.132 -08 000000106 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:10.132 -08 000000106 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:10.193 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:10.193 -08 000000106 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:10.193 -08 000000106 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:10.256 -08 000000106 INF: Y Motor: Recv v 402653184\r
17-02-28 20:16:10.256 -08 000000106 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:16:10.256 -08 000000106 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:10.256 -08 000000106 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:10.320 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:10.320 -08 000000106 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:10.320 -08 000000106 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:10.320 -08 000000106 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:10.382 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:10.382 -08 000000106 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:10.382 -08 000000106 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:10.444 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:10.444 -08 000000106 INF: ======================================
17-02-28 20:16:10.445 -08 000000079 INF: ===================Move X,Y===================
17-02-28 20:16:10.446 -08 000000079 INF: ======================================
17-02-28 20:16:10.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:10.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:10.448 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:16:10.448 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:16:10.505 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:16:10.505 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:16:10.521 -08 000000038 INF: FPGA: Recv ZFREQCL
17-02-28 20:16:10.521 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:16:10.521 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:10.522 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:10.583 -08 000000010 INF: FPGA: Recv TDIYERD 6448669
17-02-28 20:16:10.583 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448669 counts (64.487 mm)
17-02-28 20:16:10.583 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:10.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:10.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 19 of 30 seconds left===================
17-02-28 20:16:10.584 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:10.585 -08 000000052 INF: ===================TDI FPGA Arm===================
17-02-28 20:16:10.585 -08 000000068 INF: ===================Set YMotor gains for scans===================
17-02-28 20:16:10.585 -08 000000068 INF: ======================================
17-02-28 20:16:10.585 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:10.586 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:16:10.586 -08 000000052 INF: FPGA: Xmit TDIYPOS 6337742\n
17-02-28 20:16:10.645 -08 000000023 INF: FPGA: Recv TDIYPOS
17-02-28 20:16:10.645 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:10.647 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:16:10.647 -08 000000052 INF: FPGA: Xmit TDIYARM3 139264 6428667 1 1\n
17-02-28 20:16:10.706 -08 000000079 INF: FPGA: Recv TDIYARM3
17-02-28 20:16:10.706 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:10.707 -08 000000052 INF: ===================TDI FPGA Arm===================
17-02-28 20:16:10.708 -08 000000052 INF: ======================================
17-02-28 20:16:10.710 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:10.710 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:10.711 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:10.711 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:10.712 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:10.712 -08 000000089 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:16:10.712 -08 000000039 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:16:10.712 -08 000000089 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:16:10.713 -08 000000089 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:16:10.713 -08 000000089 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:16:10.713 -08 000000039 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:16:10.713 -08 000000089 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:16:10.713 -08 000000039 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:16:10.713 -08 000000039 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:16:10.714 -08 000000039 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:16:11.082 -08 000000060 INF: FPGA: Recv EX2MV
17-02-28 20:16:11.082 -08 000000060 INF: FPGA: Recv EX1MV
17-02-28 20:16:11.082 -08 000000089 INF: Excitation Filter 2: Moved -107 steps in 369.3318 ms
17-02-28 20:16:11.082 -08 000000039 INF: Excitation Filter 1: Moved -107 steps in 369.2208 ms
17-02-28 20:16:11.082 -08 000000089 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.5367 ms
17-02-28 20:16:11.082 -08 000000039 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.4796 ms
17-02-28 20:16:11.082 -08 000000039 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.5995 ms
17-02-28 20:16:11.082 -08 000000089 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.6499 ms
17-02-28 20:16:11.083 -08 000000039 INF: ======================================
17-02-28 20:16:11.083 -08 000000089 INF: ======================================
17-02-28 20:16:11.084 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:11.086 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:11.087 -08 000000028 INF: ===================Camera TDI===================
17-02-28 20:16:11.087 -08 000000106 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:11.087 -08 000000052 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:11.087 -08 000000085 INF: ===================FPGA Z Wait===================
17-02-28 20:16:11.088 -08 000000052 INF: Y Motor: Moving to 14.8383 mm @6.500 mm/sec, started at 64.4867 mm
17-02-28 20:16:11.088 -08 000000085 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:16:11.088 -08 000000052 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:11.088 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:11.088 -08 000000028 INF: ===================Camera TDI, Parallel===================
17-02-28 20:16:11.088 -08 000000106 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:16:11.089 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:16:11.089 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:16:11.089 -08 000000106 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:16:11.091 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:11.091 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:11.091 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:11.091 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:11.130 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:16:11.130 -08 000000052 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:11.130 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:11.193 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:16:11.193 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:11.241 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:11.241 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:11.241 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:11.241 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:11.254 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:16:11.254 -08 000000052 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:11.254 -08 000000052 INF: Y Motor: Set target position to 983833 encoder counts
17-02-28 20:16:11.254 -08 000000052 INF: Y Motor: Xmit s r0xca 983833\r
17-02-28 20:16:11.316 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:16:11.316 -08 000000052 INF: Y Motor: Start the move command
17-02-28 20:16:11.316 -08 000000052 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:11.381 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:16:11.381 -08 000000052 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:16:11.381 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:11.391 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:11.391 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:11.391 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:11.391 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:11.455 -08 000000050 INF: FPGA: Recv ZWAIT 
17-02-28 20:16:11.455 -08 000000085 INF: ======================================
17-02-28 20:16:11.504 -08 000000052 INF: Y Motor: Unshifted Position: 5885510
17-02-28 20:16:11.541 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:11.541 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:11.541 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:11.541 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:11.541 -08 000000082 INF: ===================Camera #0 Frame #5===================
17-02-28 20:16:11.541 -08 000000068 INF: ===================Camera #2 Frame #5===================
17-02-28 20:16:11.554 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:11.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:11.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 18 of 30 seconds left===================
17-02-28 20:16:11.680 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:11.714 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:16:11.714 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:16:11.714 -08 000000082 INF: ===================Camera #0 Frame #12===================
17-02-28 20:16:11.715 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:16:11.715 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:16:11.715 -08 000000068 INF: ===================Camera #2 Frame #12===================
17-02-28 20:16:11.815 -08 000000052 INF: Y Motor: Unshifted Position: 5683147
17-02-28 20:16:11.865 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:11.889 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:16:11.889 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:16:11.889 -08 000000082 INF: ===================Camera #0 Frame #18===================
17-02-28 20:16:11.897 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:16:11.897 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:16:11.897 -08 000000068 INF: ===================Camera #2 Frame #18===================
17-02-28 20:16:11.991 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.065 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 24, frameCount = 25.
17-02-28 20:16:12.065 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 25
17-02-28 20:16:12.065 -08 000000082 INF: ===================Camera #0 Frame #25===================
17-02-28 20:16:12.075 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 24, frameCount = 25.
17-02-28 20:16:12.075 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 25
17-02-28 20:16:12.075 -08 000000068 INF: ===================Camera #2 Frame #25===================
17-02-28 20:16:12.129 -08 000000052 INF: Y Motor: Unshifted Position: 5479054
17-02-28 20:16:12.179 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.236 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:16:12.236 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:16:12.236 -08 000000082 INF: ===================Camera #0 Frame #31===================
17-02-28 20:16:12.255 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 31, frameCount = 32.
17-02-28 20:16:12.255 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 32
17-02-28 20:16:12.255 -08 000000068 INF: ===================Camera #2 Frame #32===================
17-02-28 20:16:12.302 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.412 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:16:12.412 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:16:12.412 -08 000000082 INF: ===================Camera #0 Frame #37===================
17-02-28 20:16:12.431 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 37, frameCount = 38.
17-02-28 20:16:12.431 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 38
17-02-28 20:16:12.431 -08 000000068 INF: ===================Camera #2 Frame #38===================
17-02-28 20:16:12.441 -08 000000052 INF: Y Motor: Unshifted Position: 5276251
17-02-28 20:16:12.491 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:12.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 17 of 30 seconds left===================
17-02-28 20:16:12.586 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:16:12.586 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:16:12.586 -08 000000082 INF: ===================Camera #0 Frame #44===================
17-02-28 20:16:12.601 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:16:12.601 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:16:12.601 -08 000000068 INF: ===================Camera #2 Frame #44===================
17-02-28 20:16:12.614 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.752 -08 000000052 INF: Y Motor: Unshifted Position: 5073880
17-02-28 20:16:12.760 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:16:12.760 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:16:12.760 -08 000000082 INF: ===================Camera #0 Frame #50===================
17-02-28 20:16:12.773 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51.
17-02-28 20:16:12.773 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51
17-02-28 20:16:12.773 -08 000000068 INF: ===================Camera #2 Frame #51===================
17-02-28 20:16:12.802 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.929 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.929 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:16:12.929 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:16:12.929 -08 000000082 INF: ===================Camera #0 Frame #56===================
17-02-28 20:16:12.952 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:16:12.952 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:16:12.952 -08 000000068 INF: ===================Camera #2 Frame #57===================
17-02-28 20:16:13.063 -08 000000052 INF: Y Motor: Unshifted Position: 4871516
17-02-28 20:16:13.107 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:16:13.107 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:16:13.107 -08 000000082 INF: ===================Camera #0 Frame #63===================
17-02-28 20:16:13.113 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:13.130 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64.
17-02-28 20:16:13.130 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64
17-02-28 20:16:13.130 -08 000000068 INF: ===================Camera #2 Frame #64===================
17-02-28 20:16:13.239 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:13.288 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:16:13.288 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:16:13.288 -08 000000082 INF: ===================Camera #0 Frame #70===================
17-02-28 20:16:13.313 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:16:13.313 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 71
17-02-28 20:16:13.313 -08 000000068 INF: ===================Camera #2 Frame #71===================
17-02-28 20:16:13.375 -08 000000052 INF: Y Motor: Unshifted Position: 4668500
17-02-28 20:16:13.425 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:13.469 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:16:13.469 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:16:13.469 -08 000000082 INF: ===================Camera #0 Frame #76===================
17-02-28 20:16:13.485 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:16:13.485 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:16:13.485 -08 000000068 INF: ===================Camera #2 Frame #77===================
17-02-28 20:16:13.554 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:13.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:13.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 16 of 30 seconds left===================
17-02-28 20:16:13.638 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:16:13.638 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:16:13.638 -08 000000082 INF: ===================Camera #0 Frame #82===================
17-02-28 20:16:13.663 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:16:13.663 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:16:13.663 -08 000000068 INF: ===================Camera #2 Frame #83===================
17-02-28 20:16:13.689 -08 000000052 INF: Y Motor: Unshifted Position: 4464388
17-02-28 20:16:13.739 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:13.807 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:16:13.807 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:16:13.807 -08 000000082 INF: ===================Camera #0 Frame #89===================
17-02-28 20:16:13.832 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90.
17-02-28 20:16:13.832 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90
17-02-28 20:16:13.832 -08 000000068 INF: ===================Camera #2 Frame #90===================
17-02-28 20:16:13.862 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:13.979 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:16:13.979 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:16:13.979 -08 000000082 INF: ===================Camera #0 Frame #95===================
17-02-28 20:16:14.000 -08 000000052 INF: Y Motor: Unshifted Position: 4262245
17-02-28 20:16:14.005 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:16:14.005 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:16:14.005 -08 000000068 INF: ===================Camera #2 Frame #96===================
17-02-28 20:16:14.050 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.147 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:16:14.147 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:16:14.147 -08 000000082 INF: ===================Camera #0 Frame #101===================
17-02-28 20:16:14.175 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:16:14.175 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:16:14.175 -08 000000068 INF: ===================Camera #2 Frame #102===================
17-02-28 20:16:14.176 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.312 -08 000000052 INF: Y Motor: Unshifted Position: 4059865
17-02-28 20:16:14.316 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:16:14.316 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:16:14.316 -08 000000082 INF: ===================Camera #0 Frame #107===================
17-02-28 20:16:14.346 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109.
17-02-28 20:16:14.346 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109
17-02-28 20:16:14.346 -08 000000068 INF: ===================Camera #2 Frame #109===================
17-02-28 20:16:14.362 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.484 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:16:14.484 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:16:14.484 -08 000000082 INF: ===================Camera #0 Frame #114===================
17-02-28 20:16:14.488 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.519 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:16:14.519 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:16:14.519 -08 000000068 INF: ===================Camera #2 Frame #115===================
17-02-28 20:16:14.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:14.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 15 of 30 seconds left===================
17-02-28 20:16:14.623 -08 000000052 INF: Y Motor: Unshifted Position: 3857069
17-02-28 20:16:14.656 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:16:14.656 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:16:14.656 -08 000000082 INF: ===================Camera #0 Frame #120===================
17-02-28 20:16:14.673 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.688 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:16:14.688 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:16:14.688 -08 000000068 INF: ===================Camera #2 Frame #121===================
17-02-28 20:16:14.799 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.825 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:16:14.825 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:16:14.825 -08 000000082 INF: ===================Camera #0 Frame #126===================
17-02-28 20:16:14.857 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:16:14.857 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:16:14.857 -08 000000068 INF: ===================Camera #2 Frame #127===================
17-02-28 20:16:14.937 -08 000000052 INF: Y Motor: Unshifted Position: 3652965
17-02-28 20:16:14.987 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.994 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:16:14.994 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:16:14.994 -08 000000082 INF: ===================Camera #0 Frame #132===================
17-02-28 20:16:15.026 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134.
17-02-28 20:16:15.026 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134
17-02-28 20:16:15.026 -08 000000068 INF: ===================Camera #2 Frame #134===================
17-02-28 20:16:15.110 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:15.162 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:16:15.162 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:16:15.162 -08 000000082 INF: ===================Camera #0 Frame #139===================
17-02-28 20:16:15.198 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:16:15.198 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:16:15.198 -08 000000068 INF: ===================Camera #2 Frame #140===================
17-02-28 20:16:15.248 -08 000000052 INF: Y Motor: Unshifted Position: 3450595
17-02-28 20:16:15.298 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:15.333 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:16:15.333 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:16:15.333 -08 000000082 INF: ===================Camera #0 Frame #145===================
17-02-28 20:16:15.367 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:16:15.367 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:16:15.367 -08 000000068 INF: ===================Camera #2 Frame #146===================
17-02-28 20:16:15.422 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:15.501 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:16:15.501 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:16:15.501 -08 000000082 INF: ===================Camera #0 Frame #151===================
17-02-28 20:16:15.536 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:16:15.536 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:16:15.536 -08 000000068 INF: ===================Camera #2 Frame #152===================
17-02-28 20:16:15.560 -08 000000052 INF: Y Motor: Unshifted Position: 3247799
17-02-28 20:16:15.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:15.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 14 of 30 seconds left===================
17-02-28 20:16:15.610 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:15.669 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:16:15.669 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:16:15.669 -08 000000082 INF: ===================Camera #0 Frame #157===================
17-02-28 20:16:15.705 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 158, frameCount = 159.
17-02-28 20:16:15.705 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 159
17-02-28 20:16:15.705 -08 000000068 INF: ===================Camera #2 Frame #159===================
17-02-28 20:16:15.736 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:15.837 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:16:15.837 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:16:15.837 -08 000000082 INF: ===================Camera #0 Frame #163===================
17-02-28 20:16:15.871 -08 000000052 INF: Y Motor: Unshifted Position: 3045441
17-02-28 20:16:15.877 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:16:15.877 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:16:15.877 -08 000000068 INF: ===================Camera #2 Frame #165===================
17-02-28 20:16:15.921 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.005 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:16:16.005 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:16:16.005 -08 000000082 INF: ===================Camera #0 Frame #170===================
17-02-28 20:16:16.046 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:16:16.046 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:16:16.046 -08 000000068 INF: ===================Camera #2 Frame #171===================
17-02-28 20:16:16.047 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.176 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:16:16.176 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:16:16.176 -08 000000082 INF: ===================Camera #0 Frame #176===================
17-02-28 20:16:16.185 -08 000000052 INF: Y Motor: Unshifted Position: 2841347
17-02-28 20:16:16.215 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:16:16.215 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:16:16.215 -08 000000068 INF: ===================Camera #2 Frame #177===================
17-02-28 20:16:16.236 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.345 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:16:16.345 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:16:16.345 -08 000000082 INF: ===================Camera #0 Frame #182===================
17-02-28 20:16:16.359 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.385 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184.
17-02-28 20:16:16.385 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184
17-02-28 20:16:16.385 -08 000000068 INF: ===================Camera #2 Frame #184===================
17-02-28 20:16:16.497 -08 000000052 INF: Y Motor: Unshifted Position: 2638978
17-02-28 20:16:16.513 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:16:16.513 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:16:16.513 -08 000000082 INF: ===================Camera #0 Frame #188===================
17-02-28 20:16:16.547 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.557 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:16:16.558 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:16:16.558 -08 000000068 INF: ===================Camera #2 Frame #190===================
17-02-28 20:16:16.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:16.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 13 of 30 seconds left===================
17-02-28 20:16:16.673 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.681 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:16:16.681 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:16:16.681 -08 000000082 INF: ===================Camera #0 Frame #194===================
17-02-28 20:16:16.726 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:16:16.726 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:16:16.726 -08 000000068 INF: ===================Camera #2 Frame #196===================
17-02-28 20:16:16.808 -08 000000052 INF: Y Motor: Unshifted Position: 2434887
17-02-28 20:16:16.849 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:16:16.849 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:16:16.849 -08 000000082 INF: ===================Camera #0 Frame #201===================
17-02-28 20:16:16.858 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.895 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:16:16.895 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:16:16.895 -08 000000068 INF: ===================Camera #2 Frame #202===================
17-02-28 20:16:16.984 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:17.020 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:16:17.020 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:16:17.020 -08 000000082 INF: ===================Camera #0 Frame #207===================
17-02-28 20:16:17.064 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209.
17-02-28 20:16:17.064 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209
17-02-28 20:16:17.064 -08 000000068 INF: ===================Camera #2 Frame #209===================
17-02-28 20:16:17.122 -08 000000052 INF: Y Motor: Unshifted Position: 2232517
17-02-28 20:16:17.172 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:17.188 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:16:17.188 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:16:17.188 -08 000000082 INF: ===================Camera #0 Frame #213===================
17-02-28 20:16:17.236 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:16:17.236 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:16:17.236 -08 000000068 INF: ===================Camera #2 Frame #215===================
17-02-28 20:16:17.296 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:17.356 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:16:17.356 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:16:17.356 -08 000000082 INF: ===================Camera #0 Frame #219===================
17-02-28 20:16:17.405 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:16:17.405 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:16:17.405 -08 000000068 INF: ===================Camera #2 Frame #221===================
17-02-28 20:16:17.434 -08 000000052 INF: Y Motor: Unshifted Position: 2029711
17-02-28 20:16:17.484 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:17.524 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:16:17.524 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:16:17.524 -08 000000082 INF: ===================Camera #0 Frame #226===================
17-02-28 20:16:17.574 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:16:17.574 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:16:17.574 -08 000000068 INF: ===================Camera #2 Frame #227===================
17-02-28 20:16:17.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:17.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 12 of 30 seconds left===================
17-02-28 20:16:17.607 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:17.695 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:16:17.695 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:16:17.695 -08 000000082 INF: ===================Camera #0 Frame #232===================
17-02-28 20:16:17.743 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-02-28 20:16:17.743 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-02-28 20:16:17.743 -08 000000068 INF: ===================Camera #2 Frame #234===================
17-02-28 20:16:17.746 -08 000000052 INF: Y Motor: Unshifted Position: 1827344
17-02-28 20:16:17.796 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:17.863 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:16:17.863 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:16:17.863 -08 000000082 INF: ===================Camera #0 Frame #238===================
17-02-28 20:16:17.915 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:16:17.915 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:16:17.915 -08 000000068 INF: ===================Camera #2 Frame #240===================
17-02-28 20:16:17.921 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.031 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:16:18.031 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:16:18.031 -08 000000082 INF: ===================Camera #0 Frame #244===================
17-02-28 20:16:18.056 -08 000000052 INF: Y Motor: Unshifted Position: 1624980
17-02-28 20:16:18.084 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:16:18.084 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:16:18.084 -08 000000068 INF: ===================Camera #2 Frame #246===================
17-02-28 20:16:18.106 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.199 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:16:18.199 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:16:18.199 -08 000000082 INF: ===================Camera #0 Frame #250===================
17-02-28 20:16:18.232 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.253 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:16:18.253 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:16:18.253 -08 000000068 INF: ===================Camera #2 Frame #252===================
17-02-28 20:16:18.367 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:16:18.367 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:16:18.367 -08 000000082 INF: ===================Camera #0 Frame #257===================
17-02-28 20:16:18.370 -08 000000052 INF: Y Motor: Unshifted Position: 1420874
17-02-28 20:16:18.420 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.422 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:16:18.422 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:16:18.422 -08 000000068 INF: ===================Camera #2 Frame #259===================
17-02-28 20:16:18.538 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:16:18.538 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:16:18.538 -08 000000082 INF: ===================Camera #0 Frame #263===================
17-02-28 20:16:18.544 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:18.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 11 of 30 seconds left===================
17-02-28 20:16:18.594 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:16:18.594 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:16:18.594 -08 000000068 INF: ===================Camera #2 Frame #265===================
17-02-28 20:16:18.683 -08 000000052 INF: Y Motor: Unshifted Position: 1217857
17-02-28 20:16:18.706 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:16:18.706 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:16:18.706 -08 000000082 INF: ===================Camera #0 Frame #269===================
17-02-28 20:16:18.733 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.763 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:16:18.763 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:16:18.763 -08 000000068 INF: ===================Camera #2 Frame #271===================
17-02-28 20:16:18.818 -08 000000010 INF: FPGA: Recv TDIYWAIT
17-02-28 20:16:18.818 -08 000000106 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:18.820 -08 000000106 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:16:18.821 -08 000000101 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:16:18.821 -08 000000058 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:16:18.821 -08 000000101 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:16:18.821 -08 000000101 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:16:18.821 -08 000000101 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:16:18.821 -08 000000058 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:16:18.821 -08 000000101 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:16:18.821 -08 000000058 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:16:18.821 -08 000000058 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:16:18.822 -08 000000058 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:16:18.855 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.874 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:18.874 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:18.874 -08 000000082 INF: ===================Camera #0 Frame #272===================
17-02-28 20:16:18.884 -08 000000082 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:18.885 -08 000000082 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:19.012 -08 000000052 INF: Y Motor: Unshifted Position: 1015704
17-02-28 20:16:19.034 -08 000000082 INF: Camera #0 ReleaseBuffer
17-02-28 20:16:19.034 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:19.034 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:19.034 -08 000000068 INF: ===================Camera #2 Frame #272===================
17-02-28 20:16:19.034 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:16:19.038 -08 000000068 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:19.039 -08 000000068 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:19.062 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:19.064 -08 000000082 INF: ======================================
17-02-28 20:16:19.193 -08 000000010 INF: FPGA: Recv EX2MV
17-02-28 20:16:19.193 -08 000000010 INF: FPGA: Recv EX1MV
17-02-28 20:16:19.193 -08 000000101 INF: Excitation Filter 2: Moved 107 steps in 371.9956 ms
17-02-28 20:16:19.193 -08 000000058 INF: Excitation Filter 1: Moved 107 steps in 371.8553 ms
17-02-28 20:16:19.193 -08 000000058 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.0461 ms
17-02-28 20:16:19.193 -08 000000058 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.1233 ms
17-02-28 20:16:19.193 -08 000000101 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.1081 ms
17-02-28 20:16:19.193 -08 000000101 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.2823 ms
17-02-28 20:16:19.194 -08 000000058 INF: ======================================
17-02-28 20:16:19.194 -08 000000101 INF: ======================================
17-02-28 20:16:19.195 -08 000000052 INF: Y Motor: Unshifted Position: 983832
17-02-28 20:16:19.195 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:19.195 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:19.195 -08 000000106 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:19.196 -08 000000106 INF: ======================================
17-02-28 20:16:19.207 -08 000000068 INF: Camera #2 ReleaseBuffer
17-02-28 20:16:19.207 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:16:19.242 -08 000000068 INF: ======================================
17-02-28 20:16:19.243 -08 000000028 INF: ===================Camera TDI===================
17-02-28 20:16:19.244 -08 000000028 INF: ======================================
17-02-28 20:16:19.257 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:16:19.257 -08 000000052 INF: Y Motor: Moved to 14.8383 after 7875 ms
17-02-28 20:16:19.257 -08 000000052 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:19.322 -08 000000052 INF: Y Motor: Recv v 4097\r
17-02-28 20:16:19.322 -08 000000052 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:19.322 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:19.383 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:16:19.383 -08 000000052 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:19.383 -08 000000052 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:19.444 -08 000000052 INF: Y Motor: Recv v 134217728\r
17-02-28 20:16:19.444 -08 000000052 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:16:19.444 -08 000000052 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:19.444 -08 000000052 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:19.509 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:16:19.509 -08 000000052 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:19.509 -08 000000052 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:19.509 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:19.571 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:16:19.571 -08 000000052 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:19.571 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:19.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:19.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 10 of 30 seconds left===================
17-02-28 20:16:19.633 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:16:19.633 -08 000000052 INF: ======================================
17-02-28 20:16:19.634 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:19.635 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:19.636 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:19.636 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:16:19.693 -08 000000025 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:16:19.693 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:19.755 -08 000000030 INF: FPGA: Recv TDIYERD 1483834
17-02-28 20:16:19.755 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:16:19.817 -08 000000084 INF: FPGA: Recv ZADCR 34399
17-02-28 20:16:19.817 -08 000000018 INF: At scan end Y pos = 14.838 and Z pos = -0.132. Y moved -48.539 mm
17-02-28 20:16:19.817 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:16:19.879 -08 000000032 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:16:19.879 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:16:19.879 -08 000000018 INF: TDIScan finished after 12576.003 ms
17-02-28 20:16:19.879 -08 000000018 INF: Image[0]: Y should trigger at 63.377 mm, 2nd row was at 64.286 mm (error = 0.909 mm)
17-02-28 20:16:19.879 -08 000000018 INF: Image[2]: Y should trigger at 63.377 mm, 2nd row was at 64.286 mm (error = 0.909 mm)
17-02-28 20:16:19.881 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:19.916 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.764 um
17-02-28 20:16:19.916 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:19.917 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:16:19.941 -08 000000038 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:16:19.942 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:19.942 -08 000000089 INF: ===================Dither Clean Up Command===================
17-02-28 20:16:19.942 -08 000000082 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:16:19.942 -08 000000037 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:16:19.942 -08 000000051 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:16:19.943 -08 000000051 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:16:19.943 -08 000000051 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:16:19.943 -08 000000082 INF: ======================================
17-02-28 20:16:19.943 -08 000000037 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:19.943 -08 000000037 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:19.943 -08 000000095 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:19.943 -08 000000079 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:19.944 -08 000000095 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:16:19.946 -08 000000079 INF: ===================LFT:Extracting coords===================
17-02-28 20:16:19.972 -08 000000079 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:19.972 -08 000000079 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:16:19.973 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:16:19.973 -08 000000068 INF: ===================LookupFocusTracking===================
17-02-28 20:16:19.973 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:16:19.973 -08 000000044 INF: ===================LookupFocusTracking===================
17-02-28 20:16:19.973 -08 000000064 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:19.974 -08 000000068 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:19.974 -08 000000044 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:19.974 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:20.007 -08 000000098 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:20.007 -08 000000098 INF: FPGA: Recv ZSEL 
17-02-28 20:16:20.007 -08 000000095 INF: FPGA: Xmit ZDACW 34077\n
17-02-28 20:16:20.008 -08 000000051 INF: ======================================
17-02-28 20:16:20.011 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:16:20.011 -08 000000037 INF: ======================================
17-02-28 20:16:20.049 -08 000000068 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:20.050 -08 000000064 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:20.050 -08 000000032 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:20.050 -08 000000044 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:20.066 -08 000000050 INF: FPGA: Recv ZDACW 
17-02-28 20:16:20.067 -08 000000095 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:16:20.067 -08 000000095 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:16:20.131 -08 000000085 INF: FPGA: Recv TDIBB
17-02-28 20:16:20.131 -08 000000095 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:20.132 -08 000000095 INF: ======================================
17-02-28 20:16:20.202 -08 000000068 INF: LFT found best fwhm score 2.000106 in 152 ms
17-02-28 20:16:20.202 -08 000000068 INF: LFT found good score at index 3401 with fwhm value 2.000106. Next cycle, cycle 4 starting Z position for top surface is at -0.134 mm FC:A, C:3,L:7,T
17-02-28 20:16:20.202 -08 000000064 INF: LFT found best fwhm score 2.000044 in 152 ms
17-02-28 20:16:20.202 -08 000000064 INF: LFT found good score at index 8285 with fwhm value 2.000044. Next cycle, cycle 4 starting Z position for top surface is at -0.134 mm FC:A, C:3,L:7,T
17-02-28 20:16:20.202 -08 000000068 INF: ===================LookupFocusTracking===================
17-02-28 20:16:20.202 -08 000000032 INF: LFT found best fwhm score 2.000053 in 152 ms
17-02-28 20:16:20.202 -08 000000032 INF: LFT found good score at index 6709 with fwhm value 2.000053. Next cycle, cycle 4 starting Z position for top surface is at -0.134 mm FC:A, C:3,L:7,T
17-02-28 20:16:20.203 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:16:20.203 -08 000000068 INF: ======================================
17-02-28 20:16:20.203 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:16:20.203 -08 000000044 INF: LFT found best fwhm score 2.12612 in 152 ms
17-02-28 20:16:20.203 -08 000000044 INF: LFT found good score at index 6785 with fwhm value 2.12612. Next cycle, cycle 4 starting Z position for top surface is at -0.134 mm FC:A, C:3,L:7,T
17-02-28 20:16:20.203 -08 000000064 INF: ======================================
17-02-28 20:16:20.203 -08 000000044 INF: ===================LookupFocusTracking===================
17-02-28 20:16:20.203 -08 000000032 INF: ======================================
17-02-28 20:16:20.203 -08 000000044 INF: ======================================
17-02-28 20:16:20.204 -08 000000079 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:20.205 -08 000000079 INF: LFT weighted average best Z for top surface is at -0.134mm FC:A, C:3,L:7,T
17-02-28 20:16:20.205 -08 000000079 INF: ======================================
17-02-28 20:16:20.206 -08 000000089 INF: ======================================
17-02-28 20:16:20.207 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:20.208 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:16:20.208 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:20.208 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:16:20.209 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:20.209 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:16:20.209 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:20.209 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:16:20.209 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:20.210 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011===================
17-02-28 20:16:20.210 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011===================
17-02-28 20:16:20.210 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:16:20.211 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011===================
17-02-28 20:16:20.211 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 10 of 30 seconds left, Waiting for image analysis===================
17-02-28 20:16:20.211 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 10 of 30 seconds left===================
17-02-28 20:16:20.234 -08 000000018 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:16:20.234 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:16:20.234 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:16:20.234 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:20.235 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:16:20.235 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:16:20.235 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:16:20.278 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":7,"Tile":1203,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF261","HCSMMF238","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:20.285 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:20.285 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:20.285 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:20.381 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:16:20.382 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:20.383 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:16:20.383 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:16:20.465 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":7,"Tile":1201,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF247","HCSMMF285","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.469 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":7,"Tile":1204,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF273","HCSMMF274","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.471 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":7,"Tile":1202,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF186","HCSMMF240","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.473 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":7,"Tile":1205,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF269","HCSMMF190","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.475 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":7,"Tile":1211,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF283","HCSMMF195","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.476 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":7,"Tile":1209,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF276","HCSMMF271","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.478 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":7,"Tile":1208,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF217","HCSMMF224","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.479 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":7,"Tile":1206,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF239","HCSMMF179","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.480 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":7,"Tile":1213,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF286","HCSMMF221","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.482 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":7,"Tile":1212,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF191","HCSMMF236","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.492 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":7,"Tile":1215,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF182","HCSMMF218","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.493 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":7,"Tile":1214,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF266","HCSMMF199","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.495 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":7,"Tile":1210,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF278","HCSMMF241","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.496 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":7,"Tile":1207,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF242","HCSMMF263","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.498 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":7,"Tile":1217,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF246","HCSMMF253","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.499 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":7,"Tile":1221,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF204","HCSMMF260","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.502 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":7,"Tile":1220,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF203","HCSMMF183","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.504 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":7,"Tile":1218,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF235","HCSMMF187","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.505 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":7,"Tile":1216,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF270","HCSMMF255","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.506 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":7,"Tile":1219,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF267","HCSMMF215","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.508 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":7,"Tile":1225,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF209","HCSMMF244","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.509 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":7,"Tile":1223,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF177","HCSMMF229","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.510 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":7,"Tile":1222,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF248","HCSMMF231","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.512 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":7,"Tile":1224,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF180","HCSMMF264","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.513 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":7,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF268","HCSMMF259","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.514 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":7,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF275","HCSMMF185","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.515 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":7,"Tile":1228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF230","HCSMMF181","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.517 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:20.523 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:16:20.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:20.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 9 of 30 seconds left===================
17-02-28 20:16:20.623 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:20.623 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:16:20.661 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:20.667 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:16:20.764 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:20.769 -08 000000090 INF: FPGA: Recv MIOCOMPR
17-02-28 20:16:20.769 -08 000000018 INF: Compensator: Moved OutOfPath in 386 ms
17-02-28 20:16:20.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:20.770 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:16:20.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:20.771 -08 000000084 INF: ===================Move Tilt Motor 1===================
17-02-28 20:16:20.771 -08 000000025 INF: ===================Move Tilt Motor 2===================
17-02-28 20:16:20.771 -08 000000084 INF: Tilt Motor 1: Moving to 4.9747 mm, started at 5.1788 mm, delta = -0.2041 mm
17-02-28 20:16:20.771 -08 000000030 INF: ===================Move Tilt Motor 3===================
17-02-28 20:16:20.771 -08 000000025 INF: Tilt Motor 2: Moving to 5.3640 mm, started at 5.2428 mm, delta = 0.1212 mm
17-02-28 20:16:20.771 -08 000000084 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:20.771 -08 000000030 INF: Tilt Motor 3: Moving to 5.3906 mm, started at 5.2710 mm, delta = 0.1196 mm
17-02-28 20:16:20.774 -08 000000025 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:20.775 -08 000000030 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:20.831 -08 000000010 INF: FPGA: Recv T1RD 20388
17-02-28 20:16:20.831 -08 000000010 INF: FPGA: Recv T2RD 20641
17-02-28 20:16:20.831 -08 000000010 INF: FPGA: Recv T3RD 20750
17-02-28 20:16:20.831 -08 000000030 INF: Tilt Motor 3: Encoder: at motor step 3458 + 2/6
17-02-28 20:16:20.831 -08 000000030 INF: Tilt Motor 3: Moving to 21223 encoder counts
17-02-28 20:16:20.831 -08 000000025 INF: Tilt Motor 2: Encoder: at motor step 3440 + 1/6
17-02-28 20:16:20.831 -08 000000025 INF: Tilt Motor 2: Moving to 21118 encoder counts
17-02-28 20:16:20.831 -08 000000030 INF: FPGA: Xmit T3MOVETO 21223\n
17-02-28 20:16:20.831 -08 000000084 INF: Tilt Motor 1: Encoder: at motor step 3398 + 0/6
17-02-28 20:16:20.831 -08 000000084 INF: Tilt Motor 1: Moving to 19585 encoder counts
17-02-28 20:16:20.832 -08 000000084 INF: FPGA: Xmit T1MOVETO 19585\n
17-02-28 20:16:20.834 -08 000000025 INF: FPGA: Xmit T2MOVETO 21118\n
17-02-28 20:16:20.856 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:20.862 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:16:20.944 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:21.080 -08 000000032 INF: FPGA: Recv T3MOVETO 78
17-02-28 20:16:21.080 -08 000000032 INF: FPGA: Recv T2MOVETO 79
17-02-28 20:16:21.080 -08 000000030 INF: Tilt Motor 3: To move from 5.271 to 5.391 (0.120 mm) should take 79 steps, but required 78 steps (0.119 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:16:21.080 -08 000000025 INF: Tilt Motor 2: To move from 5.243 to 5.364 (0.121 mm) should take 80 steps, but required 79 steps (0.120 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:16:21.080 -08 000000030 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:21.083 -08 000000025 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:21.145 -08 000000095 INF: FPGA: Recv T3RD 21219
17-02-28 20:16:21.145 -08 000000095 INF: FPGA: Recv T2RD 21116
17-02-28 20:16:21.145 -08 000000095 INF: FPGA: Recv T1MOVETO 133
17-02-28 20:16:21.145 -08 000000084 INF: Tilt Motor 1: To move from 5.179 to 4.975 (-0.204 mm) should take 134 steps, but required 133 steps (0.203 mm). Slippage = -0.002 mm (0.01%)
17-02-28 20:16:21.145 -08 000000084 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:21.145 -08 000000025 INF: Tilt Motor 2: Encoder: at motor step 3519 + 2/6
17-02-28 20:16:21.145 -08 000000030 INF: Tilt Motor 3: Encoder: at motor step 3536 + 3/6
17-02-28 20:16:21.148 -08 000000025 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:21.149 -08 000000030 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:21.207 -08 000000045 INF: FPGA: Recv T1RD 19591
17-02-28 20:16:21.207 -08 000000045 INF: FPGA: Recv T2RD 21116
17-02-28 20:16:21.207 -08 000000045 INF: FPGA: Recv T3RD 21217
17-02-28 20:16:21.207 -08 000000030 INF: Tilt Motor 3: Encoder: at motor step 3536 + 1/6
17-02-28 20:16:21.207 -08 000000084 INF: Tilt Motor 1: Encoder: at motor step 3265 + 1/6
17-02-28 20:16:21.207 -08 000000030 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:21.207 -08 000000025 INF: Tilt Motor 2: Encoder: at motor step 3519 + 2/6
17-02-28 20:16:21.210 -08 000000084 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:21.211 -08 000000025 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:21.230 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:16:21.269 -08 000000089 INF: FPGA: Recv T3RD 21217
17-02-28 20:16:21.269 -08 000000089 INF: FPGA: Recv T1RD 19591
17-02-28 20:16:21.269 -08 000000089 INF: FPGA: Recv T2RD 21116
17-02-28 20:16:21.269 -08 000000025 INF: Tilt Motor 2: Encoder: at motor step 3519 + 2/6
17-02-28 20:16:21.269 -08 000000025 INF: Tilt Motor 2: After move to 5.3640, error = -0.0005, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:21.269 -08 000000030 INF: Tilt Motor 3: Encoder: at motor step 3536 + 1/6
17-02-28 20:16:21.269 -08 000000030 INF: Tilt Motor 3: After move to 5.3906, error = -0.0015, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:21.269 -08 000000025 INF: Tilt Motor 2: Moved to 5.3635 after 498.1328 ms
17-02-28 20:16:21.269 -08 000000030 INF: Tilt Motor 3: Moved to 5.3891 after 498.0454 ms
17-02-28 20:16:21.270 -08 000000084 INF: Tilt Motor 1: Encoder: at motor step 3265 + 1/6
17-02-28 20:16:21.270 -08 000000084 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:21.270 -08 000000025 INF: ======================================
17-02-28 20:16:21.270 -08 000000030 INF: ======================================
17-02-28 20:16:21.331 -08 000000023 INF: FPGA: Recv T1RD 19591
17-02-28 20:16:21.331 -08 000000084 INF: Tilt Motor 1: Encoder: at motor step 3265 + 1/6
17-02-28 20:16:21.331 -08 000000084 INF: Tilt Motor 1: After move to 4.9747, error = 0.0015, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:21.331 -08 000000084 INF: Tilt Motor 1: Moved to 4.9761 after 559.8459 ms
17-02-28 20:16:21.331 -08 000000084 INF: ======================================
17-02-28 20:16:21.333 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:21.334 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:21.334 -08 000000018 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=4.97466185449253, m2=5.36396857296219, m3=5.39063857296219
17-02-28 20:16:21.340 -08 000000018 INF: Transformed XStagePosition from 25.49393 mm to 25.4939308166504 mm.
17-02-28 20:16:21.349 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:16:21.349 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:16:21.349 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:16:21.349 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:21.350 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:21.353 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:16:21.353 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:16:21.353 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:16:21.393 -08 000000074 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:21.393 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:21.394 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:16:21.394 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1300 mm
17-02-28 20:16:21.394 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:16:21.457 -08 000000028 INF: FPGA: Recv ZTRG 
17-02-28 20:16:21.457 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:16:21.519 -08 000000060 INF: FPGA: Recv ZYT 
17-02-28 20:16:21.519 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:16:21.519 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:16:21.581 -08 000000066 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:16:21.581 -08 000000066 INF: FPGA: Recv ZMV 
17-02-28 20:16:21.581 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:16:21.581 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9808 ms
17-02-28 20:16:21.581 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:16:21.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:21.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 8 of 30 seconds left===================
17-02-28 20:16:21.643 -08 000000032 INF: FPGA: Recv ZDACR 60292
17-02-28 20:16:21.643 -08 000000018 INF: Z Motor: MoveAndTrigger took 249.476 ms w/comms
17-02-28 20:16:21.643 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:21.643 -08 000000018 INF: Z Motor: MoveAbsStepped took 249.657 ms
17-02-28 20:16:21.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:21.644 -08 000000018 INF: Transformed XStagePosition from 25.49393 mm to 25.4939308166504 mm.
17-02-28 20:16:21.653 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:16:21.653 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:21.653 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:21.653 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:16:21.653 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:16:21.705 -08 000000068 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:21.716 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:21.717 -08 000000018 INF: Transformed XStagePosition from 25.49393 mm to 25.4939308166504 mm.
17-02-28 20:16:21.725 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:16:21.725 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:21.725 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:21.728 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:21.728 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:16:21.728 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:21.728 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = H_1
17-02-28 20:16:21.729 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:21.729 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:21.730 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:16:21.730 -08 000000064 INF: ===================MoveEmissionFilters===================
17-02-28 20:16:21.731 -08 000000044 INF: ===================Move X,Y, Parallel===================
17-02-28 20:16:21.731 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:21.732 -08 000000046 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:21.732 -08 000000075 INF: ===================Move X Motor without settling===================
17-02-28 20:16:21.732 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:21.732 -08 000000075 INF: X Motor: Xmit PR VM\n
17-02-28 20:16:21.732 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:21.733 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:21.733 -08 000000025 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:21.733 -08 000000046 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:21.733 -08 000000025 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8383 mm
17-02-28 20:16:21.733 -08 000000025 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:21.733 -08 000000025 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:21.733 -08 000000059 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:21.733 -08 000000037 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:16:21.734 -08 000000099 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:16:21.734 -08 000000051 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:16:21.734 -08 000000089 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:16:21.734 -08 000000059 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:21.734 -08 000000037 INF: ======================================
17-02-28 20:16:21.734 -08 000000082 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:16:21.734 -08 000000089 INF: ======================================
17-02-28 20:16:21.735 -08 000000082 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:16:21.735 -08 000000099 INF: ======================================
17-02-28 20:16:21.735 -08 000000053 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:16:21.735 -08 000000082 INF: ======================================
17-02-28 20:16:21.735 -08 000000051 INF: ======================================
17-02-28 20:16:21.735 -08 000000053 INF: ======================================
17-02-28 20:16:21.736 -08 000000071 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:16:21.736 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:21.736 -08 000000046 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:21.736 -08 000000071 INF: ======================================
17-02-28 20:16:21.737 -08 000000038 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:16:21.737 -08 000000038 INF: ======================================
17-02-28 20:16:21.737 -08 000000032 INF: ======================================
17-02-28 20:16:21.738 -08 000000046 INF: ======================================
17-02-28 20:16:21.738 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:21.739 -08 000000059 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:21.740 -08 000000060 INF: ======================================
17-02-28 20:16:21.740 -08 000000059 INF: ======================================
17-02-28 20:16:21.741 -08 000000064 INF: ======================================
17-02-28 20:16:21.769 -08 000000075 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:16:21.769 -08 000000075 INF: X Motor: Xmit PR VI\n
17-02-28 20:16:21.770 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:16:21.770 -08 000000025 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:21.770 -08 000000025 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:21.831 -08 000000075 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:16:21.831 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:16:21.831 -08 000000025 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:21.831 -08 000000075 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:16:21.831 -08 000000075 INF: X Motor: Moving to 25.4939 mm @15.000 mm/sec, started at 23.2993 mm
17-02-28 20:16:21.831 -08 000000075 INF: X Motor: Xmit MA -13724\n
17-02-28 20:16:21.893 -08 000000075 INF: X Motor: Recv MA -13724\r\n>
17-02-28 20:16:21.893 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:16:21.893 -08 000000025 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:21.893 -08 000000075 INF: X Motor: WaitUntilStopped 60146
17-02-28 20:16:21.893 -08 000000025 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:16:21.893 -08 000000025 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:16:21.959 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:16:21.959 -08 000000025 INF: Y Motor: Start the move command
17-02-28 20:16:21.959 -08 000000025 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:22.021 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:16:22.021 -08 000000025 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:16:22.021 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:22.145 -08 000000025 INF: Y Motor: Unshifted Position: 1065716
17-02-28 20:16:22.195 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:22.320 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:22.456 -08 000000025 INF: Y Motor: Unshifted Position: 1766336
17-02-28 20:16:22.506 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:22.518 -08 000000075 INF: X Motor: Xmit PR ER\n
17-02-28 20:16:22.583 -08 000000075 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:16:22.583 -08 000000075 INF: X Motor: Moved to 25.4941 after 690 ms
17-02-28 20:16:22.583 -08 000000075 INF: ======================================
17-02-28 20:16:22.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:22.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 7 of 30 seconds left===================
17-02-28 20:16:22.633 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:22.769 -08 000000025 INF: Y Motor: Unshifted Position: 2551349
17-02-28 20:16:22.819 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:22.943 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:23.079 -08 000000025 INF: Y Motor: Unshifted Position: 3327139
17-02-28 20:16:23.129 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:23.258 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:23.393 -08 000000025 INF: Y Motor: Unshifted Position: 4113042
17-02-28 20:16:23.443 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:23.569 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:23.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:23.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 6 of 30 seconds left===================
17-02-28 20:16:23.705 -08 000000025 INF: Y Motor: Unshifted Position: 4885465
17-02-28 20:16:23.755 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:23.879 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:24.015 -08 000000025 INF: Y Motor: Unshifted Position: 5666921
17-02-28 20:16:24.065 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:24.194 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:24.329 -08 000000025 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:16:24.329 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:24.329 -08 000000025 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:24.391 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:16:24.391 -08 000000025 INF: Y Motor: Moved to 64.4706 after 2370 ms
17-02-28 20:16:24.391 -08 000000025 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:24.453 -08 000000025 INF: Y Motor: Recv v 4096\r
17-02-28 20:16:24.453 -08 000000025 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:24.453 -08 000000025 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:24.514 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:16:24.514 -08 000000025 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:24.514 -08 000000025 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:24.576 -08 000000025 INF: Y Motor: Recv v 402653184\r
17-02-28 20:16:24.576 -08 000000025 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:16:24.576 -08 000000025 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:24.576 -08 000000025 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:24.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:24.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 5 of 30 seconds left===================
17-02-28 20:16:24.641 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:16:24.641 -08 000000025 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:24.641 -08 000000025 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:24.641 -08 000000025 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:24.703 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:16:24.703 -08 000000025 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:24.703 -08 000000025 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:24.765 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:16:24.765 -08 000000025 INF: ======================================
17-02-28 20:16:24.766 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:16:24.768 -08 000000044 INF: ======================================
17-02-28 20:16:24.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:24.771 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:24.772 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:16:24.772 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:16:24.827 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:16:24.827 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:16:24.887 -08 000000058 INF: FPGA: Recv ZFREQCL
17-02-28 20:16:24.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:16:24.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:24.888 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:24.949 -08 000000047 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:16:24.949 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:16:24.950 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:24.950 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:24.951 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:16:24.951 -08 000000050 INF: ===================Set YMotor gains for scans===================
17-02-28 20:16:24.951 -08 000000050 INF: ======================================
17-02-28 20:16:24.952 -08 000000085 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:16:24.952 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:16:24.954 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:16:24.955 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:16:24.955 -08 000000085 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:16:25.011 -08 000000037 INF: FPGA: Recv TDIYPOS
17-02-28 20:16:25.012 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:16:25.014 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:16:25.014 -08 000000085 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:16:25.077 -08 000000068 INF: FPGA: Recv TDIYARM2
17-02-28 20:16:25.078 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:16:25.080 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:16:25.082 -08 000000085 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:16:25.083 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:16:25.085 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:16:25.086 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:16:25.087 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:25.466 -08 000000085 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:16:25.466 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:16:25.466 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:25.482 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:16:25.484 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:25.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:25.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 4 of 30 seconds left===================
17-02-28 20:16:25.862 -08 000000085 INF: Camera #2 AttachBuffer (imageDataPtr = 53821247560 imgPtr = 53955465288 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:16:25.862 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:16:25.863 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:25.878 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:16:25.880 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:16:25.882 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:16:25.884 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:25.885 -08 000000085 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:16:25.886 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:25.888 -08 000000085 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:16:25.888 -08 000000085 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:16:25.888 -08 000000085 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:16:25.888 -08 000000085 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:16:25.947 -08 000000052 INF: FPGA: Recv ZYT 
17-02-28 20:16:25.947 -08 000000085 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:16:25.947 -08 000000085 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:16:26.013 -08 000000075 INF: FPGA: Recv ZARM
17-02-28 20:16:26.013 -08 000000085 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.8987 ms
17-02-28 20:16:26.013 -08 000000085 INF: Z Motor: ArmAbsStepped took 124.7801 ms
17-02-28 20:16:26.014 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:26.016 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:16:26.018 -08 000000085 INF: ======================================
17-02-28 20:16:26.019 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:26.020 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:26.020 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:26.021 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:26.021 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:26.022 -08 000000047 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:16:26.023 -08 000000047 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:16:26.023 -08 000000060 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:16:26.023 -08 000000047 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:16:26.023 -08 000000047 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:16:26.023 -08 000000047 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:16:26.023 -08 000000060 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:16:26.023 -08 000000060 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:16:26.023 -08 000000060 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:16:26.024 -08 000000060 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:16:26.447 -08 000000071 INF: FPGA: Recv EX1MV
17-02-28 20:16:26.447 -08 000000071 INF: FPGA: Recv EX2MV
17-02-28 20:16:26.447 -08 000000060 INF: Excitation Filter 2: Moved -107 steps in 423.0455 ms
17-02-28 20:16:26.447 -08 000000047 INF: Excitation Filter 1: Moved -107 steps in 423.3283 ms
17-02-28 20:16:26.447 -08 000000047 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 423.5826 ms
17-02-28 20:16:26.447 -08 000000060 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 423.1918 ms
17-02-28 20:16:26.447 -08 000000060 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 423.4838 ms
17-02-28 20:16:26.447 -08 000000047 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 423.6978 ms
17-02-28 20:16:26.448 -08 000000060 INF: ======================================
17-02-28 20:16:26.448 -08 000000047 INF: ======================================
17-02-28 20:16:26.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:26.450 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:26.451 -08 000000053 INF: ===================Serial===================
17-02-28 20:16:26.451 -08 000000066 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:26.451 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:16:26.451 -08 000000039 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:26.452 -08 000000039 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:16:26.452 -08 000000039 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:26.452 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:26.452 -08 000000053 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:16:26.452 -08 000000066 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:16:26.452 -08 000000066 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:16:26.453 -08 000000053 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:16:26.453 -08 000000037 INF: ===================Camera TDI, Parallel===================
17-02-28 20:16:26.454 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:16:26.454 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:16:26.455 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.455 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.455 -08 000000010 INF: RunCopyService queue size at 2/28/2017 8:16:26 PM is 2
17-02-28 20:16:26.456 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.456 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.512 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:16:26.512 -08 000000039 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:26.512 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:26.574 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:16:26.574 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:26.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:26.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 3 of 30 seconds left===================
17-02-28 20:16:26.605 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.605 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.606 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.606 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.640 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:16:26.640 -08 000000039 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:26.640 -08 000000039 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:16:26.640 -08 000000039 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:16:26.699 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:16:26.699 -08 000000039 INF: Y Motor: Start the move command
17-02-28 20:16:26.699 -08 000000039 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:26.755 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.755 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.756 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.756 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.761 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:16:26.761 -08 000000039 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:16:26.761 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:26.888 -08 000000039 INF: Y Motor: Unshifted Position: 5928637
17-02-28 20:16:26.905 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.905 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.906 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.906 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.938 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:27.055 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:16:27.055 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:16:27.055 -08 000000051 INF: ===================Camera #2 Frame #1===================
17-02-28 20:16:27.056 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:16:27.056 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:16:27.056 -08 000000085 INF: ===================Camera #0 Frame #1===================
17-02-28 20:16:27.062 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:27.198 -08 000000039 INF: Y Motor: Unshifted Position: 5880980
17-02-28 20:16:27.209 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:16:27.209 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:16:27.209 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:16:27.209 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:16:27.209 -08 000000085 INF: ===================Camera #0 Frame #3===================
17-02-28 20:16:27.209 -08 000000051 INF: ===================Camera #2 Frame #3===================
17-02-28 20:16:27.248 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:27.365 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:16:27.365 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:16:27.365 -08 000000085 INF: ===================Camera #0 Frame #4===================
17-02-28 20:16:27.366 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:16:27.366 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:16:27.366 -08 000000051 INF: ===================Camera #2 Frame #4===================
17-02-28 20:16:27.375 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:27.510 -08 000000039 INF: Y Motor: Unshifted Position: 5834978
17-02-28 20:16:27.518 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:27.518 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:27.518 -08 000000085 INF: ===================Camera #0 Frame #5===================
17-02-28 20:16:27.519 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:27.519 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:27.519 -08 000000051 INF: ===================Camera #2 Frame #5===================
17-02-28 20:16:27.560 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:27.571 -08 000000059 INF: FPGA: Recv ZWAIT 
17-02-28 20:16:27.571 -08 000000053 INF: ===================Serial===================
17-02-28 20:16:27.573 -08 000000053 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:16:27.573 -08 000000053 INF: ===================Serial===================
17-02-28 20:16:27.574 -08 000000053 INF: ======================================
17-02-28 20:16:27.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:27.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 2 of 30 seconds left===================
17-02-28 20:16:27.637 -08 000000089 INF: FPGA: Recv TDIYWAIT
17-02-28 20:16:27.638 -08 000000066 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:27.640 -08 000000066 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:16:27.641 -08 000000032 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:16:27.641 -08 000000046 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:16:27.641 -08 000000032 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:16:27.641 -08 000000032 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:16:27.641 -08 000000032 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:16:27.641 -08 000000046 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:16:27.641 -08 000000046 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:16:27.641 -08 000000046 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:16:27.641 -08 000000032 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:16:27.642 -08 000000046 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:16:27.671 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:16:27.671 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:16:27.671 -08 000000085 INF: ===================Camera #0 Frame #6===================
17-02-28 20:16:27.672 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:16:27.672 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:16:27.672 -08 000000051 INF: ===================Camera #2 Frame #6===================
17-02-28 20:16:27.674 -08 000000085 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:16:27.675 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:27.675 -08 000000051 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:16:27.677 -08 000000051 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:27.687 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:27.712 -08 000000051 INF: Camera #2 ReleaseBuffer
17-02-28 20:16:27.712 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:16:27.713 -08 000000051 INF: ======================================
17-02-28 20:16:27.721 -08 000000085 INF: Camera #0 ReleaseBuffer
17-02-28 20:16:27.721 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:16:27.722 -08 000000085 INF: ======================================
17-02-28 20:16:27.723 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:16:27.725 -08 000000037 INF: ======================================
17-02-28 20:16:27.823 -08 000000039 INF: Y Motor: Unshifted Position: 5790760
17-02-28 20:16:27.873 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:28.009 -08 000000039 INF: Y Motor: Unshifted Position: 5790743
17-02-28 20:16:28.009 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:28.009 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:28.072 -08 000000051 INF: FPGA: Recv EX2MV
17-02-28 20:16:28.072 -08 000000051 INF: FPGA: Recv EX1MV
17-02-28 20:16:28.072 -08 000000046 INF: Excitation Filter 1: Moved 107 steps in 430.8609 ms
17-02-28 20:16:28.072 -08 000000032 INF: Excitation Filter 2: Moved 107 steps in 431.0369 ms
17-02-28 20:16:28.072 -08 000000046 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 431.0354 ms
17-02-28 20:16:28.072 -08 000000046 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 431.1696 ms
17-02-28 20:16:28.072 -08 000000032 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 431.2039 ms
17-02-28 20:16:28.072 -08 000000032 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 431.3791 ms
17-02-28 20:16:28.073 -08 000000046 INF: ======================================
17-02-28 20:16:28.073 -08 000000032 INF: ======================================
17-02-28 20:16:28.074 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:16:28.074 -08 000000039 INF: Y Motor: Moved to 62.9074 after 1313 ms
17-02-28 20:16:28.074 -08 000000039 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:28.074 -08 000000066 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:28.075 -08 000000066 INF: ======================================
17-02-28 20:16:28.136 -08 000000039 INF: Y Motor: Recv v 4097\r
17-02-28 20:16:28.136 -08 000000039 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:28.136 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:28.198 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:16:28.198 -08 000000039 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:28.198 -08 000000039 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:28.260 -08 000000039 INF: Y Motor: Recv v 134217728\r
17-02-28 20:16:28.260 -08 000000039 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:16:28.260 -08 000000039 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:28.260 -08 000000039 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:28.322 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:16:28.322 -08 000000039 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:28.322 -08 000000039 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:28.322 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:28.384 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:16:28.384 -08 000000039 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:28.384 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:28.446 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:16:28.446 -08 000000039 INF: ======================================
17-02-28 20:16:28.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:28.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:28.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.449 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:16:28.507 -08 000000089 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:16:28.507 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:28.569 -08 000000060 INF: FPGA: Recv TDIYERD 6290744
17-02-28 20:16:28.569 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:16:28.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:28.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 1 of 30 seconds left===================
17-02-28 20:16:28.631 -08 000000074 INF: FPGA: Recv ZADCR 2423
17-02-28 20:16:28.631 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:16:28.631 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:16:28.696 -08 000000059 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:16:28.696 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:16:28.696 -08 000000018 INF: TDIScan finished after 6978.7708 ms
17-02-28 20:16:28.696 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:16:28.696 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:16:28.696 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:16:28.759 -08 000000051 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:16:28.760 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.760 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.761 -08 000000045 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:16:28.761 -08 000000071 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:16:28.761 -08 000000032 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:16:28.761 -08 000000071 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:28.761 -08 000000071 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:28.761 -08 000000045 INF: ======================================
17-02-28 20:16:28.762 -08 000000032 INF: ======================================
17-02-28 20:16:28.822 -08 000000071 INF: Y Motor: Recv ok\r
17-02-28 20:16:28.822 -08 000000071 INF: ======================================
17-02-28 20:16:28.823 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.824 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.825 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:16:28.886 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.886 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:16:28.915 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.915 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:16:28.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.948 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:16:28.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:28.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:28.975 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:16:28.983 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:28.983 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:16:28.983 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:16:29.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.585 -08 000000042 INF: WaitCommand(30000) end
17-02-28 20:16:29.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:16:29.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:16:29.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, FC temperature to 20°===================
17-02-28 20:16:29.605 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:16:29.628 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0684313924307333Best Z position at top surface = -0.140779233947629Best Z position at top surface + compensator offset = -0.118079233947629 C:3,L:8,T
17-02-28 20:16:29.629 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.140779233947629
17-02-28 20:16:29.629 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.82151
17-02-28 20:16:29.629 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0684313924307333
17-02-28 20:16:29.629 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.47306
17-02-28 20:16:29.629 -08 000000018 INF: Z-height at LaneTopSurface is -0.140779233947629.
17-02-28 20:16:29.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:29.766 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:16:29.766 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:16:29.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:16:29.818 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:29.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:16:29.818 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:29.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:16:29.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:16:29.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.820 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:29.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.820 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:29.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.820 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:29.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:29.821 -08 000000060 INF: ===================Move Tilt Motor 1===================
17-02-28 20:16:29.821 -08 000000066 INF: ===================Move Tilt Motor 2===================
17-02-28 20:16:29.821 -08 000000028 INF: ===================Move Tilt Motor 3===================
17-02-28 20:16:29.822 -08 000000060 INF: Tilt Motor 1: Moving to 4.9712 mm, started at 4.9761 mm, delta = -0.0049 mm
17-02-28 20:16:29.822 -08 000000060 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:29.822 -08 000000066 INF: Tilt Motor 2: Moving to 5.3660 mm, started at 5.3635 mm, delta = 0.0026 mm
17-02-28 20:16:29.822 -08 000000028 INF: Tilt Motor 3: Moving to 5.3927 mm, started at 5.3891 mm, delta = 0.0036 mm
17-02-28 20:16:29.823 -08 000000066 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:29.825 -08 000000028 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:29.880 -08 000000059 INF: FPGA: Recv T1RD 19591
17-02-28 20:16:29.880 -08 000000059 INF: FPGA: Recv T2RD 21116
17-02-28 20:16:29.880 -08 000000059 INF: FPGA: Recv T3RD 21216
17-02-28 20:16:29.880 -08 000000066 INF: Tilt Motor 2: Encoder: at motor step 3519 + 2/6
17-02-28 20:16:29.880 -08 000000066 INF: Tilt Motor 2: Moving to 21126 encoder counts
17-02-28 20:16:29.880 -08 000000066 INF: FPGA: Xmit T2MOVETO 21126\n
17-02-28 20:16:29.880 -08 000000028 INF: Tilt Motor 3: Encoder: at motor step 3536 + 0/6
17-02-28 20:16:29.880 -08 000000028 INF: Tilt Motor 3: Moving to 21231 encoder counts
17-02-28 20:16:29.881 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:29.881 -08 000000028 INF: FPGA: Xmit T3MOVETO 21231\n
17-02-28 20:16:29.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Selecting Reagent HB2 (8)===================
17-02-28 20:16:29.881 -08 000000042 INF: Valve B1: Go to position 8
17-02-28 20:16:29.881 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:16:29.881 -08 000000060 INF: Tilt Motor 1: Encoder: at motor step 3265 + 1/6
17-02-28 20:16:29.881 -08 000000060 INF: Tilt Motor 1: Moving to 19572 encoder counts
17-02-28 20:16:29.882 -08 000000060 INF: FPGA: Xmit T1MOVETO 19572\n
17-02-28 20:16:29.943 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 1\r
17-02-28 20:16:29.943 -08 000000042 INF: Valve B1: 110.494 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:16:29.943 -08 000000042 INF: Valve B1: Taking shortest path 'CC' from 1 to 8
17-02-28 20:16:29.943 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CC8\r
17-02-28 20:16:29.943 -08 000000042 INF: SerialPort B1 (VICIB1): Recv  (discarded)
17-02-28 20:16:29.943 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:16:30.004 -08 000000059 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:16:30.004 -08 000000059 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:16:30.004 -08 000000059 INF: FPGA: Recv T1MOVETO 3
17-02-28 20:16:30.004 -08 000000060 INF: Tilt Motor 1: To move from 4.976 to 4.971 (-0.005 mm) should take 3 steps, but required 3 steps (0.005 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:16:30.004 -08 000000060 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:30.004 -08 000000028 INF: Tilt Motor 3: To move from 5.389 to 5.393 (0.004 mm) should take 2 steps, but required 1 steps (0.002 mm). Slippage = -0.002 mm (-0.43%)
17-02-28 20:16:30.004 -08 000000066 INF: Tilt Motor 2: To move from 5.363 to 5.366 (0.003 mm) should take 2 steps, but required 1 steps (0.002 mm). Slippage = -0.002 mm (-0.60%)
17-02-28 20:16:30.005 -08 000000028 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:30.007 -08 000000066 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:30.066 -08 000000047 INF: FPGA: Recv T1RD 19573
17-02-28 20:16:30.066 -08 000000047 INF: FPGA: Recv T3RD 21225
17-02-28 20:16:30.066 -08 000000047 INF: FPGA: Recv T2RD 21122
17-02-28 20:16:30.066 -08 000000060 INF: Tilt Motor 1: Encoder: at motor step 3262 + 1/6
17-02-28 20:16:30.066 -08 000000028 INF: Tilt Motor 3: Encoder: at motor step 3537 + 3/6
17-02-28 20:16:30.066 -08 000000060 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:30.066 -08 000000066 INF: Tilt Motor 2: Encoder: at motor step 3520 + 2/6
17-02-28 20:16:30.067 -08 000000066 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:30.069 -08 000000028 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:30.131 -08 000000053 INF: FPGA: Recv T1RD 19573
17-02-28 20:16:30.131 -08 000000053 INF: FPGA: Recv T2RD 21122
17-02-28 20:16:30.131 -08 000000053 INF: FPGA: Recv T3RD 21225
17-02-28 20:16:30.131 -08 000000028 INF: Tilt Motor 3: Encoder: at motor step 3537 + 3/6
17-02-28 20:16:30.131 -08 000000060 INF: Tilt Motor 1: Encoder: at motor step 3262 + 1/6
17-02-28 20:16:30.131 -08 000000066 INF: Tilt Motor 2: Encoder: at motor step 3520 + 2/6
17-02-28 20:16:30.131 -08 000000028 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:30.134 -08 000000060 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:30.135 -08 000000066 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:30.194 -08 000000071 INF: FPGA: Recv T3RD 21225
17-02-28 20:16:30.194 -08 000000071 INF: FPGA: Recv T1RD 19573
17-02-28 20:16:30.194 -08 000000071 INF: FPGA: Recv T2RD 21122
17-02-28 20:16:30.194 -08 000000066 INF: Tilt Motor 2: Encoder: at motor step 3520 + 2/6
17-02-28 20:16:30.194 -08 000000066 INF: Tilt Motor 2: After move to 5.3660, error = -0.0010, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:30.194 -08 000000060 INF: Tilt Motor 1: Encoder: at motor step 3262 + 1/6
17-02-28 20:16:30.194 -08 000000028 INF: Tilt Motor 3: Encoder: at motor step 3537 + 3/6
17-02-28 20:16:30.194 -08 000000066 INF: Tilt Motor 2: Moved to 5.3650 after 372.3192 ms
17-02-28 20:16:30.194 -08 000000028 INF: Tilt Motor 3: After move to 5.3927, error = -0.0015, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:30.194 -08 000000060 INF: Tilt Motor 1: After move to 4.9712, error = 0.0003, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:30.194 -08 000000028 INF: Tilt Motor 3: Moved to 5.3912 after 372.3404 ms
17-02-28 20:16:30.194 -08 000000060 INF: Tilt Motor 1: Moved to 4.9715 after 372.5731 ms
17-02-28 20:16:30.194 -08 000000066 INF: ======================================
17-02-28 20:16:30.194 -08 000000028 INF: ======================================
17-02-28 20:16:30.194 -08 000000060 INF: ======================================
17-02-28 20:16:30.195 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:30.196 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:30.197 -08 000000018 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=4.97119932871621, m2=5.3660158557841, m3=5.3926858557841
17-02-28 20:16:30.197 -08 000000018 INF: ETF Best Z: -0.1180792 mm (30953 DAC)
17-02-28 20:16:30.197 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:30.198 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:30.198 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:16:30.198 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:16:30.631 -08 000000059 INF: FPGA: Recv MIOCOMPF
17-02-28 20:16:30.631 -08 000000018 INF: Compensator: Moved IntoPath in 433 ms
17-02-28 20:16:30.632 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 8\r
17-02-28 20:16:30.632 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:30.632 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:30.632 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:16:30.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:30.639 -08 000000018 INF: Swath 1 position calculated to be: {X=24.93993, Y=39.70011} from estimated center X= 25.417, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:16:30.639 -08 000000018 INF: Swath 2 position calculated to be: {X=26.04793, Y=39.70011} from estimated center X= 25.417, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:16:30.645 -08 000000018 INF: Swath 0: Converted transform from (161.478, 0.2340389) pixels to (0.055545, 0) mm.
17-02-28 20:16:30.651 -08 000000018 INF: Swath 1: Converted transform from (137.0953, 1.027979) pixels to (0.047265, 0.000345) mm.
17-02-28 20:16:30.651 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011===================
17-02-28 20:16:30.651 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011===================
17-02-28 20:16:30.652 -08 000000018 INF: Transformed XStagePosition from 24.93993 mm to 24.995474960655 mm.
17-02-28 20:16:30.663 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4901163330078 mm.
17-02-28 20:16:30.663 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2901163330078 mm.
17-02-28 20:16:30.663 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3808663330078 mm.
17-02-28 20:16:30.665 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:30.665 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:16:30.666 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:30.666 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = H_1
17-02-28 20:16:30.674 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:30.674 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:30.675 -08 000000071 INF: ===================MoveEmissionFilters===================
17-02-28 20:16:30.675 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:16:30.675 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:30.676 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:30.676 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:30.676 -08 000000075 INF: ===================Move X,Y, Parallel===================
17-02-28 20:16:30.676 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:30.676 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:16:30.676 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:30.676 -08 000000028 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:16:30.677 -08 000000028 INF: Z Motor: Moving to -0.1381 mm, started at -0.0100 mm
17-02-28 20:16:30.677 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:30.677 -08 000000028 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:16:30.677 -08 000000101 INF: ===================Move X Motor without settling===================
17-02-28 20:16:30.677 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:30.677 -08 000000106 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:30.677 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:30.677 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:30.677 -08 000000101 INF: X Motor: Xmit PR VM\n
17-02-28 20:16:30.677 -08 000000106 INF: Y Motor: Moving to 64.4901 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:16:30.677 -08 000000106 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:30.677 -08 000000039 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:16:30.677 -08 000000090 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:16:30.678 -08 000000095 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:16:30.678 -08 000000058 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:16:30.678 -08 000000037 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:16:30.678 -08 000000090 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:16:30.678 -08 000000064 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:16:30.678 -08 000000023 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:16:30.678 -08 000000052 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:16:30.678 -08 000000090 INF: ======================================
17-02-28 20:16:30.678 -08 000000023 INF: ======================================
17-02-28 20:16:30.678 -08 000000058 INF: ======================================
17-02-28 20:16:30.679 -08 000000052 INF: ======================================
17-02-28 20:16:30.679 -08 000000039 INF: ======================================
17-02-28 20:16:30.679 -08 000000095 INF: ======================================
17-02-28 20:16:30.679 -08 000000064 INF: ======================================
17-02-28 20:16:30.680 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:30.680 -08 000000106 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:30.680 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:30.681 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:30.681 -08 000000037 INF: ======================================
17-02-28 20:16:30.681 -08 000000066 INF: ======================================
17-02-28 20:16:30.681 -08 000000098 INF: ======================================
17-02-28 20:16:30.682 -08 000000047 INF: ======================================
17-02-28 20:16:30.682 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:30.683 -08 000000051 INF: ======================================
17-02-28 20:16:30.684 -08 000000071 INF: ======================================
17-02-28 20:16:30.696 -08 000000010 INF: FPGA: Recv ZTRG 
17-02-28 20:16:30.696 -08 000000028 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:16:30.755 -08 000000064 INF: FPGA: Recv ZYT 
17-02-28 20:16:30.755 -08 000000028 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:16:30.755 -08 000000028 INF: FPGA: Xmit ZMV 36196\n
17-02-28 20:16:30.757 -08 000000101 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:16:30.757 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:30.757 -08 000000101 INF: X Motor: Xmit PR VI\n
17-02-28 20:16:30.757 -08 000000106 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:30.757 -08 000000106 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:30.817 -08 000000084 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:16:30.817 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:16:30.819 -08 000000101 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:16:30.819 -08 000000101 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:16:30.819 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:30.819 -08 000000101 INF: X Motor: Moving to 24.9955 mm @15.000 mm/sec, started at 25.4941 mm
17-02-28 20:16:30.819 -08 000000106 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:30.819 -08 000000101 INF: X Motor: Xmit MA -13928\n
17-02-28 20:16:30.881 -08 000000101 INF: X Motor: Recv MA -13928\r\n>
17-02-28 20:16:30.881 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:30.881 -08 000000106 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:30.881 -08 000000101 INF: X Motor: WaitUntilStopped 60033
17-02-28 20:16:30.881 -08 000000106 INF: Y Motor: Set target position to 5949012 encoder counts
17-02-28 20:16:30.881 -08 000000106 INF: Y Motor: Xmit s r0xca 5949012\r
17-02-28 20:16:30.941 -08 000000084 INF: FPGA: Recv ZMV 
17-02-28 20:16:30.941 -08 000000028 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.8925 ms
17-02-28 20:16:30.941 -08 000000028 INF: FPGA: Xmit ZDACR\n
17-02-28 20:16:30.943 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:30.943 -08 000000106 INF: Y Motor: Start the move command
17-02-28 20:16:30.943 -08 000000106 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:31.003 -08 000000098 INF: FPGA: Recv ZDACR 36196
17-02-28 20:16:31.003 -08 000000028 INF: Z Motor: MoveAndTrigger took 326.3551 ms w/comms
17-02-28 20:16:31.003 -08 000000028 INF: Z Motor: After move to -0.1381, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:31.003 -08 000000028 INF: Z Motor: MoveAbsStepped took 326.5213 ms
17-02-28 20:16:31.003 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:31.005 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:31.005 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:16:31.005 -08 000000106 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:16:31.005 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:31.006 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:16:31.006 -08 000000051 INF: ===================Camera Arm TDI===================
17-02-28 20:16:31.006 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:31.007 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:31.007 -08 000000038 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:16:31.007 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:31.007 -08 000000051 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:31.008 -08 000000038 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:16:31.065 -08 000000050 INF: FPGA: Recv ZSEL 
17-02-28 20:16:31.066 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:31.066 -08 000000038 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:16:31.127 -08 000000066 INF: FPGA: Recv TDIBB
17-02-28 20:16:31.127 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:31.128 -08 000000038 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:16:31.129 -08 000000106 INF: Y Motor: Unshifted Position: 5872224
17-02-28 20:16:31.129 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:31.130 -08 000000038 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:16:31.130 -08 000000038 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:16:31.130 -08 000000038 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:16:31.179 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:31.192 -08 000000052 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:31.192 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:31.194 -08 000000038 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:16:31.194 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:31.196 -08 000000038 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:16:31.196 -08 000000038 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:16:31.196 -08 000000038 INF: Z Motor: Arming to move to -0.0981 mm
17-02-28 20:16:31.196 -08 000000038 INF: FPGA: Xmit ZYT 6429012 4\n
17-02-28 20:16:31.254 -08 000000039 INF: FPGA: Recv ZYT 
17-02-28 20:16:31.254 -08 000000038 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6372224 enc / 63.722 mm / ) = 6429012 enc / 64.290 mm
17-02-28 20:16:31.254 -08 000000038 INF: FPGA: Xmit ZARM 25710\n
17-02-28 20:16:31.306 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:31.314 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:31.314 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:31.314 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:31.316 -08 000000085 INF: FPGA: Recv ZARM
17-02-28 20:16:31.316 -08 000000038 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0279 ms
17-02-28 20:16:31.316 -08 000000038 INF: Z Motor: ArmAbsStepped took 119.7291 ms
17-02-28 20:16:31.316 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:31.317 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:16:31.318 -08 000000101 INF: X Motor: Xmit PR ER\n
17-02-28 20:16:31.319 -08 000000038 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:16:31.319 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:16:31.321 -08 000000038 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:16:31.321 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:16:31.322 -08 000000038 INF: ======================================
17-02-28 20:16:31.379 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:31.380 -08 000000101 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:16:31.380 -08 000000101 INF: X Motor: Moved to 24.9961 after 499 ms
17-02-28 20:16:31.380 -08 000000101 INF: ======================================
17-02-28 20:16:31.387 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 60, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:16:31.442 -08 000000106 INF: Y Motor: Unshifted Position: 5949014
17-02-28 20:16:31.442 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:31.442 -08 000000106 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:31.479 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:16:31.504 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:31.504 -08 000000106 INF: Y Motor: Moved to 64.4901 after 499 ms
17-02-28 20:16:31.504 -08 000000106 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:31.565 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:16:31.565 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:16:31.566 -08 000000106 INF: Y Motor: Recv v 4096\r
17-02-28 20:16:31.566 -08 000000106 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:31.566 -08 000000106 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:31.628 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:31.628 -08 000000106 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:31.628 -08 000000106 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:31.665 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:16:31.693 -08 000000106 INF: Y Motor: Recv v 402653184\r
17-02-28 20:16:31.693 -08 000000106 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:16:31.693 -08 000000106 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:31.693 -08 000000106 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:31.754 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:31.755 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:31.755 -08 000000106 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:31.755 -08 000000106 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:31.755 -08 000000106 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:31.817 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:31.817 -08 000000106 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:31.817 -08 000000106 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:31.854 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:31.879 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:31.879 -08 000000106 INF: ======================================
17-02-28 20:16:31.880 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:16:31.881 -08 000000075 INF: ======================================
17-02-28 20:16:31.940 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:31.980 -08 000000051 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:16:31.980 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:16:31.980 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:31.995 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:31.997 -08 000000051 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:32.190 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:32.254 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:32.354 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:16:32.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:32.540 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:32.564 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:32.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:16:32.664 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V1600IP11520R\r
17-02-28 20:16:32.752 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:32.852 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:32.940 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:33.020 -08 000000051 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:16:33.021 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:16:33.021 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:33.036 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:33.038 -08 000000051 INF: ===================Camera Arm TDI===================
17-02-28 20:16:33.039 -08 000000051 INF: ======================================
17-02-28 20:16:33.040 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:33.041 -08 000000028 INF: ======================================
17-02-28 20:16:33.042 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:33.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:33.043 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:16:33.043 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:16:33.128 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:16:33.128 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:16:33.188 -08 000000098 INF: FPGA: Recv ZFREQCL
17-02-28 20:16:33.188 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:16:33.188 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:33.188 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:33.190 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:33.250 -08 000000051 INF: FPGA: Recv TDIYERD 6449013
17-02-28 20:16:33.250 -08 000000018 INF: Before scan, Y encoder from FPGA = 6449013 counts (64.490 mm)
17-02-28 20:16:33.250 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:33.251 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:33.251 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:33.251 -08 000000025 INF: ===================TDI FPGA Arm===================
17-02-28 20:16:33.251 -08 000000082 INF: ===================Set YMotor gains for scans===================
17-02-28 20:16:33.252 -08 000000082 INF: ======================================
17-02-28 20:16:33.252 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:33.253 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:16:33.253 -08 000000025 INF: FPGA: Xmit TDIYPOS 6338087\n
17-02-28 20:16:33.312 -08 000000030 INF: FPGA: Recv TDIYPOS
17-02-28 20:16:33.312 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:33.313 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:16:33.314 -08 000000025 INF: FPGA: Xmit TDIYARM3 139264 6429012 1 1\n
17-02-28 20:16:33.375 -08 000000059 INF: FPGA: Recv TDIYARM3
17-02-28 20:16:33.375 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:33.376 -08 000000025 INF: ===================TDI FPGA Arm===================
17-02-28 20:16:33.377 -08 000000025 INF: ======================================
17-02-28 20:16:33.378 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:33.379 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:33.379 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:33.379 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:33.380 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:33.381 -08 000000079 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:16:33.381 -08 000000053 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:16:33.381 -08 000000079 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:16:33.381 -08 000000079 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:16:33.381 -08 000000079 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:16:33.381 -08 000000053 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:16:33.381 -08 000000079 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:16:33.381 -08 000000053 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:16:33.381 -08 000000053 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:16:33.382 -08 000000053 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:16:33.501 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:33.563 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:33.750 -08 000000074 INF: FPGA: Recv EX2MV
17-02-28 20:16:33.750 -08 000000074 INF: FPGA: Recv EX1MV
17-02-28 20:16:33.750 -08 000000053 INF: Excitation Filter 1: Moved -107 steps in 368.8645 ms
17-02-28 20:16:33.750 -08 000000053 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.9877 ms
17-02-28 20:16:33.750 -08 000000079 INF: Excitation Filter 2: Moved -107 steps in 369.0797 ms
17-02-28 20:16:33.750 -08 000000079 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.2071 ms
17-02-28 20:16:33.750 -08 000000079 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.277 ms
17-02-28 20:16:33.750 -08 000000053 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.0969 ms
17-02-28 20:16:33.750 -08 000000079 INF: ======================================
17-02-28 20:16:33.751 -08 000000053 INF: ======================================
17-02-28 20:16:33.751 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:33.753 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:33.753 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:16:33.753 -08 000000066 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:33.753 -08 000000044 INF: ===================FPGA Z Wait===================
17-02-28 20:16:33.753 -08 000000095 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:33.754 -08 000000044 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:16:33.754 -08 000000095 INF: Y Motor: Moving to 14.8418 mm @6.500 mm/sec, started at 64.4901 mm
17-02-28 20:16:33.754 -08 000000095 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:33.754 -08 000000095 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:33.754 -08 000000068 INF: ===================Camera TDI, Parallel===================
17-02-28 20:16:33.754 -08 000000066 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:16:33.755 -08 000000066 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:16:33.755 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:16:33.755 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:16:33.757 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:33.757 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:33.757 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:33.757 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:33.813 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:33.815 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:16:33.815 -08 000000095 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:33.815 -08 000000095 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:33.874 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:33.875 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:16:33.875 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:33.907 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:33.907 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:33.907 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:33.907 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:33.937 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:16:33.937 -08 000000095 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:33.937 -08 000000095 INF: Y Motor: Set target position to 984178 encoder counts
17-02-28 20:16:33.937 -08 000000095 INF: Y Motor: Xmit s r0xca 984178\r
17-02-28 20:16:34.001 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:16:34.001 -08 000000095 INF: Y Motor: Start the move command
17-02-28 20:16:34.001 -08 000000095 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:34.057 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:34.057 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:34.057 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:34.057 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:34.063 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:16:34.063 -08 000000095 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:16:34.063 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:34.124 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:34.124 -08 000000030 INF: FPGA: Recv ZWAIT 
17-02-28 20:16:34.124 -08 000000044 INF: ======================================
17-02-28 20:16:34.187 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:34.188 -08 000000095 INF: Y Motor: Unshifted Position: 5885855
17-02-28 20:16:34.207 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:34.207 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:34.207 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:34.207 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:34.207 -08 000000032 INF: ===================Camera #0 Frame #5===================
17-02-28 20:16:34.207 -08 000000084 INF: ===================Camera #2 Frame #5===================
17-02-28 20:16:34.238 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:34.365 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:34.373 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:16:34.373 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:16:34.373 -08 000000032 INF: ===================Camera #0 Frame #11===================
17-02-28 20:16:34.374 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:16:34.374 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:16:34.374 -08 000000084 INF: ===================Camera #2 Frame #11===================
17-02-28 20:16:34.437 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:34.500 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:34.501 -08 000000095 INF: Y Motor: Unshifted Position: 5684794
17-02-28 20:16:34.543 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:16:34.543 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:16:34.543 -08 000000032 INF: ===================Camera #0 Frame #17===================
17-02-28 20:16:34.545 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:16:34.545 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:16:34.545 -08 000000084 INF: ===================Camera #2 Frame #17===================
17-02-28 20:16:34.551 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:34.674 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:34.713 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:16:34.713 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:16:34.713 -08 000000032 INF: ===================Camera #0 Frame #23===================
17-02-28 20:16:34.715 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:16:34.715 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:16:34.715 -08 000000084 INF: ===================Camera #2 Frame #23===================
17-02-28 20:16:34.750 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:34.812 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:34.813 -08 000000095 INF: Y Motor: Unshifted Position: 5481350
17-02-28 20:16:34.863 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:34.883 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:16:34.883 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:16:34.883 -08 000000032 INF: ===================Camera #0 Frame #29===================
17-02-28 20:16:34.886 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:16:34.886 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:16:34.886 -08 000000084 INF: ===================Camera #2 Frame #30===================
17-02-28 20:16:34.987 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.053 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:16:35.053 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:16:35.053 -08 000000032 INF: ===================Camera #0 Frame #36===================
17-02-28 20:16:35.060 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:16:35.060 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:16:35.060 -08 000000084 INF: ===================Camera #2 Frame #36===================
17-02-28 20:16:35.062 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:35.124 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:35.125 -08 000000095 INF: Y Motor: Unshifted Position: 5277670
17-02-28 20:16:35.175 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.225 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:16:35.225 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:16:35.225 -08 000000032 INF: ===================Camera #0 Frame #42===================
17-02-28 20:16:35.230 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:16:35.230 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:16:35.230 -08 000000084 INF: ===================Camera #2 Frame #42===================
17-02-28 20:16:35.299 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.374 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:35.394 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:16:35.394 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:16:35.394 -08 000000032 INF: ===================Camera #0 Frame #48===================
17-02-28 20:16:35.400 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:16:35.400 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:16:35.400 -08 000000084 INF: ===================Camera #2 Frame #48===================
17-02-28 20:16:35.435 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:35.436 -08 000000095 INF: Y Motor: Unshifted Position: 5074875
17-02-28 20:16:35.486 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.562 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:16:35.562 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:16:35.562 -08 000000032 INF: ===================Camera #0 Frame #54===================
17-02-28 20:16:35.569 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:16:35.569 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:16:35.569 -08 000000084 INF: ===================Camera #2 Frame #55===================
17-02-28 20:16:35.610 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.685 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:35.730 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:16:35.730 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:16:35.730 -08 000000032 INF: ===================Camera #0 Frame #61===================
17-02-28 20:16:35.742 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:16:35.742 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:16:35.742 -08 000000084 INF: ===================Camera #2 Frame #61===================
17-02-28 20:16:35.747 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:35.748 -08 000000095 INF: Y Motor: Unshifted Position: 4873164
17-02-28 20:16:35.798 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.902 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:16:35.902 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:16:35.902 -08 000000032 INF: ===================Camera #0 Frame #67===================
17-02-28 20:16:35.912 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:16:35.912 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:16:35.912 -08 000000084 INF: ===================Camera #2 Frame #67===================
17-02-28 20:16:35.921 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.997 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:36.058 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:36.059 -08 000000095 INF: Y Motor: Unshifted Position: 4669490
17-02-28 20:16:36.072 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:16:36.072 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:16:36.072 -08 000000032 INF: ===================Camera #0 Frame #73===================
17-02-28 20:16:36.083 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:16:36.083 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:16:36.083 -08 000000084 INF: ===================Camera #2 Frame #74===================
17-02-28 20:16:36.109 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:36.235 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:36.242 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:16:36.242 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:16:36.242 -08 000000032 INF: ===================Camera #0 Frame #79===================
17-02-28 20:16:36.258 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:16:36.258 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:16:36.258 -08 000000084 INF: ===================Camera #2 Frame #80===================
17-02-28 20:16:36.309 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:36.372 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:36.373 -08 000000095 INF: Y Motor: Unshifted Position: 4466032
17-02-28 20:16:36.412 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:16:36.412 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:16:36.412 -08 000000032 INF: ===================Camera #0 Frame #86===================
17-02-28 20:16:36.423 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:36.429 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:16:36.429 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:16:36.429 -08 000000084 INF: ===================Camera #2 Frame #86===================
17-02-28 20:16:36.548 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:36.585 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:16:36.585 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:16:36.585 -08 000000032 INF: ===================Camera #0 Frame #92===================
17-02-28 20:16:36.600 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:16:36.600 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:16:36.600 -08 000000084 INF: ===================Camera #2 Frame #93===================
17-02-28 20:16:36.622 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:36.682 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:36.683 -08 000000095 INF: Y Motor: Unshifted Position: 4264537
17-02-28 20:16:36.733 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:36.755 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:16:36.755 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:16:36.755 -08 000000032 INF: ===================Camera #0 Frame #98===================
17-02-28 20:16:36.774 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:16:36.774 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:16:36.774 -08 000000084 INF: ===================Camera #2 Frame #99===================
17-02-28 20:16:36.860 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:36.925 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:16:36.925 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:16:36.925 -08 000000032 INF: ===================Camera #0 Frame #105===================
17-02-28 20:16:36.932 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:36.945 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:16:36.945 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:16:36.945 -08 000000084 INF: ===================Camera #2 Frame #105===================
17-02-28 20:16:36.996 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:36.997 -08 000000095 INF: Y Motor: Unshifted Position: 4060214
17-02-28 20:16:37.047 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.098 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:16:37.098 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:16:37.098 -08 000000032 INF: ===================Camera #0 Frame #111===================
17-02-28 20:16:37.115 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:16:37.115 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:16:37.115 -08 000000084 INF: ===================Camera #2 Frame #112===================
17-02-28 20:16:37.171 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.246 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:37.268 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:16:37.268 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:16:37.268 -08 000000032 INF: ===================Camera #0 Frame #117===================
17-02-28 20:16:37.289 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:16:37.289 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:16:37.289 -08 000000084 INF: ===================Camera #2 Frame #118===================
17-02-28 20:16:37.308 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:37.309 -08 000000095 INF: Y Motor: Unshifted Position: 3858712
17-02-28 20:16:37.359 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.438 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:16:37.438 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:16:37.438 -08 000000032 INF: ===================Camera #0 Frame #123===================
17-02-28 20:16:37.459 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:16:37.459 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:16:37.459 -08 000000084 INF: ===================Camera #2 Frame #124===================
17-02-28 20:16:37.485 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.558 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:37.608 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:16:37.608 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:16:37.608 -08 000000032 INF: ===================Camera #0 Frame #130===================
17-02-28 20:16:37.620 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:37.621 -08 000000095 INF: Y Motor: Unshifted Position: 3654395
17-02-28 20:16:37.630 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:16:37.630 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:16:37.630 -08 000000084 INF: ===================Camera #2 Frame #131===================
17-02-28 20:16:37.671 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.760 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.780 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:16:37.780 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:16:37.781 -08 000000032 INF: ===================Camera #0 Frame #136===================
17-02-28 20:16:37.804 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:16:37.804 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:16:37.804 -08 000000084 INF: ===================Camera #2 Frame #137===================
17-02-28 20:16:37.870 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:37.885 -08 000000095 INF: Y Motor: Unshifted Position: 3481935
17-02-28 20:16:37.935 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.947 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:37.950 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:16:37.950 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:16:37.950 -08 000000032 INF: ===================Camera #0 Frame #142===================
17-02-28 20:16:37.974 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:16:37.974 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:16:37.974 -08 000000084 INF: ===================Camera #2 Frame #143===================
17-02-28 20:16:38.059 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:38.120 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:16:38.120 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:16:38.120 -08 000000032 INF: ===================Camera #0 Frame #149===================
17-02-28 20:16:38.145 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:16:38.145 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:16:38.145 -08 000000084 INF: ===================Camera #2 Frame #150===================
17-02-28 20:16:38.197 -08 000000095 INF: Y Motor: Unshifted Position: 3279143
17-02-28 20:16:38.197 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:38.247 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:38.261 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:38.292 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:16:38.292 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:16:38.292 -08 000000032 INF: ===================Camera #0 Frame #155===================
17-02-28 20:16:38.319 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:16:38.319 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:16:38.319 -08 000000084 INF: ===================Camera #2 Frame #156===================
17-02-28 20:16:38.373 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:38.462 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:16:38.462 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:16:38.462 -08 000000032 INF: ===================Camera #0 Frame #161===================
17-02-28 20:16:38.490 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:16:38.490 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:16:38.490 -08 000000084 INF: ===================Camera #2 Frame #162===================
17-02-28 20:16:38.511 -08 000000095 INF: Y Motor: Unshifted Position: 3077645
17-02-28 20:16:38.511 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:38.561 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:38.571 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:38.631 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:16:38.631 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:16:38.631 -08 000000032 INF: ===================Camera #0 Frame #167===================
17-02-28 20:16:38.661 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:16:38.661 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:16:38.661 -08 000000084 INF: ===================Camera #2 Frame #169===================
17-02-28 20:16:38.683 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:38.799 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:16:38.799 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:16:38.799 -08 000000032 INF: ===================Camera #0 Frame #174===================
17-02-28 20:16:38.821 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:38.822 -08 000000095 INF: Y Motor: Unshifted Position: 2874624
17-02-28 20:16:38.833 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:16:38.833 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:16:38.833 -08 000000084 INF: ===================Camera #2 Frame #175===================
17-02-28 20:16:38.872 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:38.885 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:38.970 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:16:38.970 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:16:38.970 -08 000000032 INF: ===================Camera #0 Frame #180===================
17-02-28 20:16:38.995 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.002 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:16:39.002 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:16:39.002 -08 000000084 INF: ===================Camera #2 Frame #181===================
17-02-28 20:16:39.132 -08 000000095 INF: Y Motor: Unshifted Position: 2670311
17-02-28 20:16:39.135 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:39.139 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:16:39.139 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:16:39.139 -08 000000032 INF: ===================Camera #0 Frame #186===================
17-02-28 20:16:39.173 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:16:39.173 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:16:39.173 -08 000000084 INF: ===================Camera #2 Frame #187===================
17-02-28 20:16:39.182 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.196 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:39.309 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:16:39.309 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:16:39.309 -08 000000032 INF: ===================Camera #0 Frame #192===================
17-02-28 20:16:39.311 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.344 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:16:39.344 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:16:39.344 -08 000000084 INF: ===================Camera #2 Frame #194===================
17-02-28 20:16:39.446 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:39.446 -08 000000095 INF: Y Motor: Unshifted Position: 2468813
17-02-28 20:16:39.477 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:16:39.477 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:16:39.477 -08 000000032 INF: ===================Camera #0 Frame #199===================
17-02-28 20:16:39.496 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.507 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:39.518 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:16:39.518 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:16:39.518 -08 000000084 INF: ===================Camera #2 Frame #200===================
17-02-28 20:16:39.621 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.650 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:16:39.650 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:16:39.650 -08 000000032 INF: ===================Camera #0 Frame #205===================
17-02-28 20:16:39.688 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:16:39.688 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:16:39.688 -08 000000084 INF: ===================Camera #2 Frame #206===================
17-02-28 20:16:39.757 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:39.757 -08 000000095 INF: Y Motor: Unshifted Position: 2265789
17-02-28 20:16:39.807 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.818 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:39.820 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:16:39.820 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:16:39.820 -08 000000032 INF: ===================Camera #0 Frame #211===================
17-02-28 20:16:39.859 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:16:39.859 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:16:39.859 -08 000000084 INF: ===================Camera #2 Frame #213===================
17-02-28 20:16:39.933 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.990 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:16:39.990 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:16:39.990 -08 000000032 INF: ===================Camera #0 Frame #217===================
17-02-28 20:16:40.033 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:16:40.033 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:16:40.033 -08 000000084 INF: ===================Camera #2 Frame #219===================
17-02-28 20:16:40.068 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:40.072 -08 000000095 INF: Y Motor: Unshifted Position: 2061692
17-02-28 20:16:40.122 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:40.130 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:40.160 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:16:40.160 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:16:40.160 -08 000000032 INF: ===================Camera #0 Frame #224===================
17-02-28 20:16:40.204 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:16:40.204 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:16:40.204 -08 000000084 INF: ===================Camera #2 Frame #225===================
17-02-28 20:16:40.245 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:40.333 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:16:40.333 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:16:40.333 -08 000000032 INF: ===================Camera #0 Frame #230===================
17-02-28 20:16:40.375 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:16:40.375 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:16:40.375 -08 000000084 INF: ===================Camera #2 Frame #232===================
17-02-28 20:16:40.380 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:40.380 -08 000000095 INF: Y Motor: Unshifted Position: 1859972
17-02-28 20:16:40.430 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:40.443 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:40.503 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:16:40.503 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:16:40.503 -08 000000032 INF: ===================Camera #0 Frame #236===================
17-02-28 20:16:40.548 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:16:40.548 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:16:40.548 -08 000000084 INF: ===================Camera #2 Frame #238===================
17-02-28 20:16:40.556 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:40.672 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:16:40.672 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:16:40.672 -08 000000032 INF: ===================Camera #0 Frame #243===================
17-02-28 20:16:40.693 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:40.694 -08 000000095 INF: Y Motor: Unshifted Position: 1655868
17-02-28 20:16:40.719 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:16:40.719 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:16:40.719 -08 000000084 INF: ===================Camera #2 Frame #244===================
17-02-28 20:16:40.744 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:40.755 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:40.755 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:40.755 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:40.756 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:16:40.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:16:40.845 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:16:40.845 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:16:40.845 -08 000000032 INF: ===================Camera #0 Frame #249===================
17-02-28 20:16:40.869 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:40.889 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:16:40.889 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:16:40.889 -08 000000084 INF: ===================Camera #2 Frame #251===================
17-02-28 20:16:41.005 -08 000000095 INF: Y Motor: Unshifted Position: 1454365
17-02-28 20:16:41.015 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:16:41.015 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:16:41.015 -08 000000032 INF: ===================Camera #0 Frame #255===================
17-02-28 20:16:41.055 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:41.063 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:16:41.063 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:16:41.063 -08 000000084 INF: ===================Camera #2 Frame #257===================
17-02-28 20:16:41.180 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:41.185 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:16:41.185 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:16:41.185 -08 000000032 INF: ===================Camera #0 Frame #261===================
17-02-28 20:16:41.234 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:16:41.234 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:16:41.234 -08 000000084 INF: ===================Camera #2 Frame #263===================
17-02-28 20:16:41.318 -08 000000095 INF: Y Motor: Unshifted Position: 1250051
17-02-28 20:16:41.355 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:16:41.355 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:16:41.355 -08 000000032 INF: ===================Camera #0 Frame #268===================
17-02-28 20:16:41.368 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:41.405 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:16:41.405 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:16:41.405 -08 000000084 INF: ===================Camera #2 Frame #270===================
17-02-28 20:16:41.491 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:41.504 -08 000000099 INF: FPGA: Recv TDIYWAIT
17-02-28 20:16:41.504 -08 000000066 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:41.506 -08 000000066 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:16:41.507 -08 000000059 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:16:41.507 -08 000000089 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:16:41.507 -08 000000059 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:16:41.507 -08 000000059 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:16:41.507 -08 000000059 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:16:41.507 -08 000000059 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:16:41.507 -08 000000089 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:16:41.507 -08 000000089 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:16:41.507 -08 000000089 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:16:41.508 -08 000000089 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:16:41.528 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:41.528 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:41.528 -08 000000032 INF: ===================Camera #0 Frame #272===================
17-02-28 20:16:41.541 -08 000000032 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:41.542 -08 000000032 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:41.629 -08 000000095 INF: Y Motor: Unshifted Position: 1047896
17-02-28 20:16:41.679 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:41.706 -08 000000032 INF: Camera #0 ReleaseBuffer
17-02-28 20:16:41.706 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:41.706 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:41.706 -08 000000084 INF: ===================Camera #2 Frame #272===================
17-02-28 20:16:41.706 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:16:41.713 -08 000000084 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:41.714 -08 000000084 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:41.740 -08 000000032 INF: ======================================
17-02-28 20:16:41.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:41.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:16:41.805 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:41.878 -08 000000039 INF: FPGA: Recv EX1MV
17-02-28 20:16:41.878 -08 000000039 INF: FPGA: Recv EX2MV
17-02-28 20:16:41.878 -08 000000089 INF: Excitation Filter 2: Moved 107 steps in 370.7726 ms
17-02-28 20:16:41.878 -08 000000059 INF: Excitation Filter 1: Moved 107 steps in 371.0086 ms
17-02-28 20:16:41.878 -08 000000059 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.1033 ms
17-02-28 20:16:41.878 -08 000000059 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.1741 ms
17-02-28 20:16:41.878 -08 000000089 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.8851 ms
17-02-28 20:16:41.878 -08 000000089 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.2957 ms
17-02-28 20:16:41.879 -08 000000059 INF: ======================================
17-02-28 20:16:41.879 -08 000000089 INF: ======================================
17-02-28 20:16:41.880 -08 000000066 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:41.881 -08 000000066 INF: ======================================
17-02-28 20:16:41.912 -08 000000084 INF: Camera #2 ReleaseBuffer
17-02-28 20:16:41.912 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:16:41.942 -08 000000095 INF: Y Motor: Unshifted Position: 984178
17-02-28 20:16:41.942 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:41.942 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:41.946 -08 000000084 INF: ======================================
17-02-28 20:16:41.948 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:16:41.949 -08 000000068 INF: ======================================
17-02-28 20:16:42.004 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:16:42.004 -08 000000095 INF: Y Motor: Moved to 14.8418 after 7940 ms
17-02-28 20:16:42.004 -08 000000095 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:42.065 -08 000000095 INF: Y Motor: Recv v 4097\r
17-02-28 20:16:42.065 -08 000000095 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:42.065 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:42.130 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:16:42.130 -08 000000095 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:42.130 -08 000000095 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:42.191 -08 000000095 INF: Y Motor: Recv v 134217728\r
17-02-28 20:16:42.191 -08 000000095 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:16:42.191 -08 000000095 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:42.191 -08 000000095 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:42.253 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:16:42.253 -08 000000095 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:42.253 -08 000000095 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:42.253 -08 000000095 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:42.315 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:16:42.315 -08 000000095 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:42.315 -08 000000095 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:42.379 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:16:42.379 -08 000000095 INF: ======================================
17-02-28 20:16:42.380 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:42.381 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:42.382 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.382 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:16:42.439 -08 000000032 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:16:42.439 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:42.502 -08 000000085 INF: FPGA: Recv TDIYERD 1484179
17-02-28 20:16:42.502 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:16:42.562 -08 000000038 INF: FPGA: Recv ZADCR 36272
17-02-28 20:16:42.562 -08 000000018 INF: At scan end Y pos = 14.842 and Z pos = -0.139. Y moved -48.539 mm
17-02-28 20:16:42.562 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:16:42.627 -08 000000047 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:16:42.627 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:16:42.627 -08 000000018 INF: TDIScan finished after 11975.0824 ms
17-02-28 20:16:42.627 -08 000000018 INF: Image[0]: Y should trigger at 63.381 mm, 2nd row was at 64.290 mm (error = 0.909 mm)
17-02-28 20:16:42.627 -08 000000018 INF: Image[2]: Y should trigger at 63.381 mm, 2nd row was at 64.290 mm (error = 0.909 mm)
17-02-28 20:16:42.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.661 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.894 um
17-02-28 20:16:42.662 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.663 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:16:42.688 -08 000000028 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:16:42.689 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.689 -08 000000082 INF: ===================Dither Clean Up Command===================
17-02-28 20:16:42.689 -08 000000074 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:16:42.689 -08 000000046 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:16:42.690 -08 000000095 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:16:42.690 -08 000000095 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:16:42.690 -08 000000074 INF: ======================================
17-02-28 20:16:42.690 -08 000000095 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:16:42.690 -08 000000046 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:42.690 -08 000000046 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:42.690 -08 000000085 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:42.690 -08 000000051 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:42.691 -08 000000085 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:16:42.694 -08 000000051 INF: ===================LFT:Extracting coords===================
17-02-28 20:16:42.719 -08 000000051 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:42.719 -08 000000051 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:16:42.720 -08 000000023 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.720 -08 000000044 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.720 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.720 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.721 -08 000000023 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:42.721 -08 000000044 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:42.721 -08 000000098 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:42.721 -08 000000047 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:42.750 -08 000000032 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:42.750 -08 000000032 INF: FPGA: Recv ZSEL 
17-02-28 20:16:42.750 -08 000000085 INF: FPGA: Xmit ZDACW 36196\n
17-02-28 20:16:42.750 -08 000000095 INF: ======================================
17-02-28 20:16:42.752 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:16:42.752 -08 000000046 INF: ======================================
17-02-28 20:16:42.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:42.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:16:42.796 -08 000000023 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:42.796 -08 000000044 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:42.796 -08 000000098 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:42.797 -08 000000047 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:42.814 -08 000000090 INF: FPGA: Recv ZDACW 
17-02-28 20:16:42.814 -08 000000085 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:16:42.814 -08 000000085 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:16:42.876 -08 000000099 INF: FPGA: Recv TDIBB
17-02-28 20:16:42.876 -08 000000085 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:42.877 -08 000000085 INF: ======================================
17-02-28 20:16:42.948 -08 000000023 INF: LFT found best fwhm score 2.000103 in 152 ms
17-02-28 20:16:42.948 -08 000000023 INF: LFT found good score at index 4821 with fwhm value 2.000103. Next cycle, cycle 4 starting Z position for top surface is at -0.138 mm FC:A, C:3,L:8,T
17-02-28 20:16:42.949 -08 000000098 INF: LFT found best fwhm score 2.124739 in 153 ms
17-02-28 20:16:42.949 -08 000000098 INF: LFT found good score at index 5473 with fwhm value 2.124739. Next cycle, cycle 4 starting Z position for top surface is at -0.138 mm FC:A, C:3,L:8,T
17-02-28 20:16:42.949 -08 000000044 INF: LFT found best fwhm score 2.000106 in 153 ms
17-02-28 20:16:42.949 -08 000000047 INF: LFT found best fwhm score 2.000128 in 152 ms
17-02-28 20:16:42.949 -08 000000044 INF: LFT found good score at index 1117 with fwhm value 2.000106. Next cycle, cycle 4 starting Z position for top surface is at -0.139 mm FC:A, C:3,L:8,T
17-02-28 20:16:42.949 -08 000000047 INF: LFT found good score at index 8829 with fwhm value 2.000128. Next cycle, cycle 4 starting Z position for top surface is at -0.139 mm FC:A, C:3,L:8,T
17-02-28 20:16:42.949 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.949 -08 000000023 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.949 -08 000000044 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.949 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.949 -08 000000098 INF: ======================================
17-02-28 20:16:42.949 -08 000000044 INF: ======================================
17-02-28 20:16:42.950 -08 000000023 INF: ======================================
17-02-28 20:16:42.950 -08 000000047 INF: ======================================
17-02-28 20:16:42.951 -08 000000051 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:42.952 -08 000000051 INF: LFT weighted average best Z for top surface is at -0.139mm FC:A, C:3,L:8,T
17-02-28 20:16:42.952 -08 000000051 INF: ======================================
17-02-28 20:16:42.953 -08 000000082 INF: ======================================
17-02-28 20:16:42.954 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.955 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:16:42.955 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.955 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:16:42.955 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.955 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:16:42.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:16:42.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011===================
17-02-28 20:16:42.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011===================
17-02-28 20:16:42.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:16:42.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011===================
17-02-28 20:16:42.957 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:16:42.958 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:16:42.980 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:16:42.981 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:42.981 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011===================
17-02-28 20:16:42.981 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:42.981 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011===================
17-02-28 20:16:42.981 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:16:42.982 -08 000000018 INF: Transformed XStagePosition from 26.04793 mm to 26.0951947644353 mm.
17-02-28 20:16:42.993 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4904613330155 mm.
17-02-28 20:16:42.993 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2904613330155 mm.
17-02-28 20:16:42.993 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3812113330155 mm.
17-02-28 20:16:42.996 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.996 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:16:42.996 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.996 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -138.1 um, section = H_1
17-02-28 20:16:42.998 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:42.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:43.002 -08 000000098 INF: ===================MoveEmissionFilters===================
17-02-28 20:16:43.003 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:43.003 -08 000000047 INF: ===================Move X,Y===================
17-02-28 20:16:43.004 -08 000000047 INF: ===================Move X,Y, Parallel===================
17-02-28 20:16:43.004 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:16:43.004 -08 000000058 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:16:43.005 -08 000000106 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:43.005 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:43.006 -08 000000106 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:43.008 -08 000000057 INF: ===================Move X Motor without settling===================
17-02-28 20:16:43.008 -08 000000057 INF: X Motor: Xmit PR VM\n
17-02-28 20:16:43.008 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:16:43.062 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:43.064 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:43.068 -08 000000104 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:16:43.068 -08 000000082 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:16:43.068 -08 000000104 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:16:43.069 -08 000000057 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:16:43.069 -08 000000105 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:43.069 -08 000000109 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:16:43.069 -08 000000057 INF: X Motor: Xmit PR VI\n
17-02-28 20:16:43.069 -08 000000082 INF: ======================================
17-02-28 20:16:43.069 -08 000000074 INF: ===================Camera Arm TDI===================
17-02-28 20:16:43.069 -08 000000105 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:43.070 -08 000000109 INF: ======================================
17-02-28 20:16:43.071 -08 000000074 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:43.072 -08 000000109 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:43.073 -08 000000074 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:43.073 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:16:43.073 -08 000000082 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:16:43.073 -08 000000109 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:43.073 -08 000000092 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:43.074 -08 000000092 INF: Y Motor: Moving to 64.4905 mm @25.000 mm/sec, started at 14.8418 mm
17-02-28 20:16:43.074 -08 000000092 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:43.074 -08 000000092 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:43.074 -08 000000082 INF: ======================================
17-02-28 20:16:43.074 -08 000000032 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:16:43.075 -08 000000053 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:16:43.075 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:43.075 -08 000000051 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:16:43.076 -08 000000032 INF: ======================================
17-02-28 20:16:43.076 -08 000000051 INF: ======================================
17-02-28 20:16:43.077 -08 000000085 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:16:43.077 -08 000000085 INF: ======================================
17-02-28 20:16:43.078 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:43.078 -08 000000104 INF: ======================================
17-02-28 20:16:43.078 -08 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:16:43.078 -08 000000109 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:43.079 -08 000000045 INF: ======================================
17-02-28 20:16:43.079 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:43.080 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":8,"Tile":1103,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF245","HCSMMF180","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.081 -08 000000086 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:16:43.081 -08 000000053 INF: ======================================
17-02-28 20:16:43.082 -08 000000109 INF: ======================================
17-02-28 20:16:43.082 -08 000000106 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:43.083 -08 000000106 INF: ======================================
17-02-28 20:16:43.085 -08 000000105 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:43.088 -08 000000105 INF: ======================================
17-02-28 20:16:43.092 -08 000000098 INF: ======================================
17-02-28 20:16:43.129 -08 000000106 INF: FPGA: Recv ZSEL 
17-02-28 20:16:43.131 -08 000000092 INF: Y Motor: Recv ok\r
17-02-28 20:16:43.131 -08 000000092 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:43.131 -08 000000092 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:43.131 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:43.131 -08 000000086 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:16:43.132 -08 000000057 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:16:43.132 -08 000000057 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:16:43.132 -08 000000057 INF: X Motor: Moving to 26.0952 mm @15.000 mm/sec, started at 24.9961 mm
17-02-28 20:16:43.132 -08 000000057 INF: X Motor: Xmit MA -13478\n
17-02-28 20:16:43.160 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":8,"Tile":1107,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF256","HCSMMF230","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.189 -08 000000104 INF: FPGA: Recv TDIBB
17-02-28 20:16:43.189 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":8,"Tile":1101,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF275","HCSMMF223","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.190 -08 000000057 INF: X Motor: Recv MA -13478\r\n>
17-02-28 20:16:43.190 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:43.190 -08 000000057 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:16:43.191 -08 000000092 INF: Y Motor: Recv ok\r
17-02-28 20:16:43.191 -08 000000092 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:43.192 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":8,"Tile":1108,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF269","HCSMMF287","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.193 -08 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:16:43.194 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:43.194 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":8,"Tile":1102,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF259","HCSMMF264","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.197 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":8,"Tile":1106,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF177","HCSMMF182","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.202 -08 000000086 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:16:43.203 -08 000000086 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:16:43.203 -08 000000086 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:16:43.204 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":8,"Tile":1104,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF189","HCSMMF202","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.207 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":8,"Tile":1105,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF268","HCSMMF265","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.216 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":8,"Tile":1109,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF190","HCSMMF183","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.218 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":8,"Tile":1110,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF229","HCSMMF284","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.219 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":8,"Tile":1115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF220","HCSMMF199","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.220 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":8,"Tile":1114,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF267","HCSMMF188","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.221 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":8,"Tile":1112,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF244","HCSMMF250","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.223 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":8,"Tile":1113,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF260","HCSMMF227","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.225 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":8,"Tile":1111,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF222","HCSMMF206","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.226 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":8,"Tile":1116,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF281","HCSMMF237","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.227 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":8,"Tile":1119,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF232","HCSMMF251","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.232 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":8,"Tile":1122,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF239","HCSMMF253","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.233 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":8,"Tile":1128,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF271","HCSMMF262","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.235 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":8,"Tile":1118,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF215","HCSMMF236","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.236 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":8,"Tile":1117,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF243","HCSMMF192","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.237 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":8,"Tile":1120,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF231","HCSMMF247","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.238 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":8,"Tile":1121,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF200","HCSMMF285","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.239 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":8,"Tile":1124,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF198","HCSMMF205","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.240 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":8,"Tile":1127,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF263","HCSMMF270","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.241 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":8,"Tile":1126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF258","HCSMMF196","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.243 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":8,"Tile":1125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF194","HCSMMF286","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.244 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":8,"Tile":1123,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF191","HCSMMF242","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.247 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:43.251 -08 000000092 INF: Y Motor: Recv v 0\r
17-02-28 20:16:43.251 -08 000000092 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:43.251 -08 000000092 INF: Y Motor: Set target position to 5949046 encoder counts
17-02-28 20:16:43.251 -08 000000092 INF: Y Motor: Xmit s r0xca 5949046\r
17-02-28 20:16:43.251 -08 000000038 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:43.252 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:43.253 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:16:43.254 -08 000000086 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:16:43.254 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:43.256 -08 000000086 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:16:43.256 -08 000000086 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:16:43.256 -08 000000086 INF: Z Motor: Arming to move to -0.0981 mm
17-02-28 20:16:43.256 -08 000000086 INF: FPGA: Xmit ZYT 6429046 4\n
17-02-28 20:16:43.311 -08 000000079 INF: FPGA: Recv ZYT 
17-02-28 20:16:43.311 -08 000000086 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1484178 enc / 14.842 mm / ) = 6429046 enc / 64.290 mm
17-02-28 20:16:43.311 -08 000000086 INF: FPGA: Xmit ZARM 25710\n
17-02-28 20:16:43.313 -08 000000092 INF: Y Motor: Recv ok\r
17-02-28 20:16:43.313 -08 000000092 INF: Y Motor: Start the move command
17-02-28 20:16:43.313 -08 000000092 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:43.351 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:43.351 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:16:43.376 -08 000000023 INF: FPGA: Recv ZARM
17-02-28 20:16:43.376 -08 000000086 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.9753 ms
17-02-28 20:16:43.376 -08 000000086 INF: Z Motor: ArmAbsStepped took 120.1271 ms
17-02-28 20:16:43.376 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:43.378 -08 000000092 INF: Y Motor: Recv ok\r
17-02-28 20:16:43.378 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:16:43.378 -08 000000092 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:16:43.378 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:43.379 -08 000000086 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:16:43.380 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:16:43.381 -08 000000086 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:16:43.381 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:16:43.383 -08 000000086 INF: ======================================
17-02-28 20:16:43.406 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:43.412 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:16:43.501 -08 000000092 INF: Y Motor: Unshifted Position: 1068251
17-02-28 20:16:43.508 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:43.514 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:16:43.551 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:43.623 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:43.630 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:16:43.665 -08 000000074 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:16:43.665 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:16:43.665 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:43.679 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:43.680 -08 000000074 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:43.682 -08 000000074 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:43.729 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:43.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:43.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:16:43.813 -08 000000092 INF: Y Motor: Unshifted Position: 1778348
17-02-28 20:16:43.813 -08 000000057 INF: X Motor: Xmit PR ER\n
17-02-28 20:16:43.863 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:43.877 -08 000000057 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:16:43.877 -08 000000057 INF: X Motor: Moved to 26.0947 after 686 ms
17-02-28 20:16:43.877 -08 000000057 INF: ======================================
17-02-28 20:16:43.991 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:44.009 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:16:44.124 -08 000000092 INF: Y Motor: Unshifted Position: 2554197
17-02-28 20:16:44.174 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:44.281 -08 000000074 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:16:44.281 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:16:44.281 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:44.297 -08 000000074 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:44.299 -08 000000074 INF: ===================Camera Arm TDI===================
17-02-28 20:16:44.300 -08 000000074 INF: ======================================
17-02-28 20:16:44.302 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:44.303 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:44.303 -08 000000058 INF: ======================================
17-02-28 20:16:44.438 -08 000000092 INF: Y Motor: Unshifted Position: 3339138
17-02-28 20:16:44.488 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:44.611 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:44.751 -08 000000092 INF: Y Motor: Unshifted Position: 4117549
17-02-28 20:16:44.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:44.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:16:44.801 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:44.923 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:45.061 -08 000000092 INF: Y Motor: Unshifted Position: 4897484
17-02-28 20:16:45.111 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:45.237 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:45.372 -08 000000092 INF: Y Motor: Unshifted Position: 5674397
17-02-28 20:16:45.422 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:45.549 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:45.686 -08 000000092 INF: Y Motor: Unshifted Position: 5949048
17-02-28 20:16:45.686 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:45.686 -08 000000092 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:45.747 -08 000000092 INF: Y Motor: Recv v 0\r
17-02-28 20:16:45.747 -08 000000092 INF: Y Motor: Moved to 64.4905 after 2369 ms
17-02-28 20:16:45.747 -08 000000092 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:45.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:45.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:45.756 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:16:45.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:45.809 -08 000000092 INF: Y Motor: Recv v 4096\r
17-02-28 20:16:45.809 -08 000000092 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:45.809 -08 000000092 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:45.855 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:16:45.874 -08 000000092 INF: Y Motor: Recv v 0\r
17-02-28 20:16:45.874 -08 000000092 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:45.874 -08 000000092 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:45.934 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`11520 (0x03)\r\n(0xFF)
17-02-28 20:16:45.934 -08 000000042 INF: Current Position of Pump is: 11520
17-02-28 20:16:45.935 -08 000000092 INF: Y Motor: Recv v 402653184\r
17-02-28 20:16:45.935 -08 000000092 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:16:45.935 -08 000000092 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:45.935 -08 000000092 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:45.997 -08 000000092 INF: Y Motor: Recv v 0\r
17-02-28 20:16:45.997 -08 000000092 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:45.997 -08 000000092 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:45.997 -08 000000092 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:46.034 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:16:46.061 -08 000000092 INF: Y Motor: Recv ok\r
17-02-28 20:16:46.061 -08 000000092 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:46.061 -08 000000092 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:46.122 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`11520 (0x03)\r\n(0xFF)
17-02-28 20:16:46.122 -08 000000042 INF: Current Position of Pump is: 11520
17-02-28 20:16:46.122 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:16:46.123 -08 000000092 INF: Y Motor: Recv ok\r
17-02-28 20:16:46.123 -08 000000092 INF: ======================================
17-02-28 20:16:46.124 -08 000000047 INF: ===================Move X,Y===================
17-02-28 20:16:46.125 -08 000000047 INF: ======================================
17-02-28 20:16:46.126 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:46.127 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:46.127 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:16:46.127 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:16:46.185 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:16:46.185 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:16:46.222 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD11520R\r
17-02-28 20:16:46.245 -08 000000045 INF: FPGA: Recv ZFREQCL
17-02-28 20:16:46.245 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:16:46.245 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:46.246 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:46.307 -08 000000057 INF: FPGA: Recv TDIYERD 6449048
17-02-28 20:16:46.307 -08 000000018 INF: Before scan, Y encoder from FPGA = 6449048 counts (64.490 mm)
17-02-28 20:16:46.308 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:46.308 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:46.308 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:46.309 -08 000000068 INF: ===================TDI FPGA Arm===================
17-02-28 20:16:46.309 -08 000000106 INF: ===================Set YMotor gains for scans===================
17-02-28 20:16:46.309 -08 000000106 INF: ======================================
17-02-28 20:16:46.310 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:46.310 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:16:46.310 -08 000000068 INF: FPGA: Xmit TDIYPOS 6338121\n
17-02-28 20:16:46.372 -08 000000090 INF: FPGA: Recv TDIYPOS
17-02-28 20:16:46.372 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:46.374 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:16:46.374 -08 000000068 INF: FPGA: Xmit TDIYARM3 139264 6429046 1 1\n
17-02-28 20:16:46.408 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:46.433 -08 000000058 INF: FPGA: Recv TDIYARM3
17-02-28 20:16:46.433 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:46.434 -08 000000068 INF: ===================TDI FPGA Arm===================
17-02-28 20:16:46.435 -08 000000068 INF: ======================================
17-02-28 20:16:46.437 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:46.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:46.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:46.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:46.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:46.440 -08 000000038 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:16:46.440 -08 000000045 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:16:46.440 -08 000000038 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:16:46.440 -08 000000038 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:16:46.440 -08 000000038 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:16:46.440 -08 000000045 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:16:46.440 -08 000000038 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:16:46.440 -08 000000045 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:16:46.440 -08 000000045 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:16:46.441 -08 000000045 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:16:46.496 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:46.746 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:46.808 -08 000000028 INF: FPGA: Recv EX2MV
17-02-28 20:16:46.808 -08 000000028 INF: FPGA: Recv EX1MV
17-02-28 20:16:46.808 -08 000000038 INF: Excitation Filter 2: Moved -107 steps in 368.1342 ms
17-02-28 20:16:46.808 -08 000000045 INF: Excitation Filter 1: Moved -107 steps in 368.032 ms
17-02-28 20:16:46.808 -08 000000038 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.2928 ms
17-02-28 20:16:46.808 -08 000000038 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.4342 ms
17-02-28 20:16:46.808 -08 000000045 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.2567 ms
17-02-28 20:16:46.808 -08 000000045 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.435 ms
17-02-28 20:16:46.809 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:46.809 -08 000000038 INF: ======================================
17-02-28 20:16:46.809 -08 000000045 INF: ======================================
17-02-28 20:16:46.810 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:46.811 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:46.812 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:16:46.812 -08 000000057 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:46.812 -08 000000023 INF: ===================FPGA Z Wait===================
17-02-28 20:16:46.812 -08 000000064 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:46.812 -08 000000023 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:16:46.812 -08 000000074 INF: ===================Camera TDI, Parallel===================
17-02-28 20:16:46.813 -08 000000064 INF: Y Motor: Moving to 14.8421 mm @6.500 mm/sec, started at 64.4905 mm
17-02-28 20:16:46.813 -08 000000057 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:16:46.813 -08 000000064 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:46.813 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:46.813 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:16:46.814 -08 000000057 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:16:46.814 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:16:46.816 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:46.816 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:46.816 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:46.816 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:46.873 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:16:46.873 -08 000000064 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:46.873 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:46.935 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:16:46.935 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:46.966 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:46.966 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:46.966 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:46.966 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:46.996 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:16:46.996 -08 000000064 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:46.996 -08 000000064 INF: Y Motor: Set target position to 984212 encoder counts
17-02-28 20:16:46.996 -08 000000064 INF: Y Motor: Xmit s r0xca 984212\r
17-02-28 20:16:47.060 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:16:47.060 -08 000000064 INF: Y Motor: Start the move command
17-02-28 20:16:47.060 -08 000000064 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:47.061 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:47.116 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:47.116 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:47.116 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:47.116 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:47.122 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:47.123 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:16:47.123 -08 000000064 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:16:47.123 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:47.198 -08 000000055 INF: FPGA: Recv ZWAIT 
17-02-28 20:16:47.199 -08 000000023 INF: ======================================
17-02-28 20:16:47.261 -08 000000064 INF: Y Motor: Unshifted Position: 5876138
17-02-28 20:16:47.266 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:47.266 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:47.266 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:47.266 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:47.266 -08 000000095 INF: ===================Camera #0 Frame #5===================
17-02-28 20:16:47.266 -08 000000084 INF: ===================Camera #2 Frame #5===================
17-02-28 20:16:47.311 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:47.372 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:47.432 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:16:47.432 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:16:47.432 -08 000000095 INF: ===================Camera #0 Frame #11===================
17-02-28 20:16:47.436 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:47.438 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:16:47.438 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:16:47.438 -08 000000084 INF: ===================Camera #2 Frame #11===================
17-02-28 20:16:47.447 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:47.573 -08 000000064 INF: Y Motor: Unshifted Position: 5673989
17-02-28 20:16:47.610 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:16:47.610 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:16:47.610 -08 000000095 INF: ===================Camera #0 Frame #17===================
17-02-28 20:16:47.623 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:47.624 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:16:47.624 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:16:47.624 -08 000000084 INF: ===================Camera #2 Frame #18===================
17-02-28 20:16:47.697 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:47.748 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:47.759 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:47.786 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:16:47.786 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:16:47.786 -08 000000095 INF: ===================Camera #0 Frame #24===================
17-02-28 20:16:47.806 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:16:47.806 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:16:47.806 -08 000000084 INF: ===================Camera #2 Frame #24===================
17-02-28 20:16:47.887 -08 000000064 INF: Y Motor: Unshifted Position: 5470974
17-02-28 20:16:47.937 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:47.967 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:16:47.967 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:16:47.967 -08 000000095 INF: ===================Camera #0 Frame #30===================
17-02-28 20:16:47.984 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:16:47.984 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:16:47.984 -08 000000084 INF: ===================Camera #2 Frame #31===================
17-02-28 20:16:48.009 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:48.059 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.073 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:48.073 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:48.073 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:16:48.141 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:16:48.141 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:16:48.141 -08 000000095 INF: ===================Camera #0 Frame #37===================
17-02-28 20:16:48.164 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 37, frameCount = 38.
17-02-28 20:16:48.164 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 38
17-02-28 20:16:48.164 -08 000000084 INF: ===================Camera #2 Frame #38===================
17-02-28 20:16:48.199 -08 000000064 INF: Y Motor: Unshifted Position: 5268827
17-02-28 20:16:48.249 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.313 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:16:48.313 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:16:48.313 -08 000000095 INF: ===================Camera #0 Frame #43===================
17-02-28 20:16:48.337 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:16:48.337 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:16:48.337 -08 000000084 INF: ===================Camera #2 Frame #44===================
17-02-28 20:16:48.371 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.482 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:16:48.482 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:16:48.482 -08 000000095 INF: ===================Camera #0 Frame #49===================
17-02-28 20:16:48.506 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:16:48.506 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:16:48.506 -08 000000084 INF: ===================Camera #2 Frame #50===================
17-02-28 20:16:48.511 -08 000000064 INF: Y Motor: Unshifted Position: 5065817
17-02-28 20:16:48.561 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.656 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:16:48.656 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:16:48.656 -08 000000095 INF: ===================Camera #0 Frame #56===================
17-02-28 20:16:48.676 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:16:48.676 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:16:48.676 -08 000000084 INF: ===================Camera #2 Frame #56===================
17-02-28 20:16:48.684 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.823 -08 000000064 INF: Y Motor: Unshifted Position: 4862799
17-02-28 20:16:48.831 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:16:48.831 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:16:48.831 -08 000000095 INF: ===================Camera #0 Frame #62===================
17-02-28 20:16:48.849 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:16:48.849 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:16:48.849 -08 000000084 INF: ===================Camera #2 Frame #63===================
17-02-28 20:16:48.873 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.997 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.999 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:16:48.999 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:16:48.999 -08 000000095 INF: ===================Camera #0 Frame #68===================
17-02-28 20:16:49.033 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:16:49.033 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:16:49.033 -08 000000084 INF: ===================Camera #2 Frame #70===================
17-02-28 20:16:49.134 -08 000000064 INF: Y Motor: Unshifted Position: 4658699
17-02-28 20:16:49.173 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:16:49.175 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:16:49.175 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:16:49.175 -08 000000095 INF: ===================Camera #0 Frame #75===================
17-02-28 20:16:49.184 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:49.216 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:16:49.216 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:16:49.216 -08 000000084 INF: ===================Camera #2 Frame #76===================
17-02-28 20:16:49.258 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:49.310 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:49.357 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:16:49.357 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:16:49.357 -08 000000095 INF: ===================Camera #0 Frame #82===================
17-02-28 20:16:49.358 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:49.384 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:49.387 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:16:49.387 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:16:49.387 -08 000000084 INF: ===================Camera #2 Frame #83===================
17-02-28 20:16:49.446 -08 000000064 INF: Y Motor: Unshifted Position: 4455885
17-02-28 20:16:49.496 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:49.529 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:16:49.529 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:16:49.529 -08 000000095 INF: ===================Camera #0 Frame #88===================
17-02-28 20:16:49.560 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:16:49.560 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:16:49.560 -08 000000084 INF: ===================Camera #2 Frame #89===================
17-02-28 20:16:49.621 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:49.634 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:49.696 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:49.696 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:49.696 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:16:49.698 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:16:49.698 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:16:49.698 -08 000000095 INF: ===================Camera #0 Frame #94===================
17-02-28 20:16:49.729 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:16:49.729 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:16:49.729 -08 000000084 INF: ===================Camera #2 Frame #95===================
17-02-28 20:16:49.758 -08 000000064 INF: Y Motor: Unshifted Position: 4252876
17-02-28 20:16:49.808 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:49.866 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:16:49.866 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:16:49.866 -08 000000095 INF: ===================Camera #0 Frame #100===================
17-02-28 20:16:49.898 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:16:49.898 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:16:49.898 -08 000000084 INF: ===================Camera #2 Frame #101===================
17-02-28 20:16:49.933 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.034 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:16:50.034 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:16:50.034 -08 000000095 INF: ===================Camera #0 Frame #106===================
17-02-28 20:16:50.067 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:16:50.067 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:16:50.067 -08 000000084 INF: ===================Camera #2 Frame #108===================
17-02-28 20:16:50.071 -08 000000064 INF: Y Motor: Unshifted Position: 4051142
17-02-28 20:16:50.121 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.202 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:16:50.202 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:16:50.202 -08 000000095 INF: ===================Camera #0 Frame #113===================
17-02-28 20:16:50.239 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:16:50.239 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:16:50.239 -08 000000084 INF: ===================Camera #2 Frame #114===================
17-02-28 20:16:50.243 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.251 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:50.251 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:50.252 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:50.252 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:16:50.253 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3===================
17-02-28 20:16:50.254 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:16:50.267 -08 000000042 INF: Call to RTA to retrieve registration transforms took 13 ms.
17-02-28 20:16:50.268 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:16:50.374 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:16:50.374 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:16:50.374 -08 000000095 INF: ===================Camera #0 Frame #119===================
17-02-28 20:16:50.383 -08 000000064 INF: Y Motor: Unshifted Position: 3848348
17-02-28 20:16:50.408 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:16:50.408 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:16:50.408 -08 000000084 INF: ===================Camera #2 Frame #120===================
17-02-28 20:16:50.433 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.542 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:16:50.542 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:16:50.542 -08 000000095 INF: ===================Camera #0 Frame #125===================
17-02-28 20:16:50.556 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.577 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:16:50.577 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:16:50.577 -08 000000084 INF: ===================Camera #2 Frame #126===================
17-02-28 20:16:50.695 -08 000000064 INF: Y Motor: Unshifted Position: 3644244
17-02-28 20:16:50.710 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:16:50.710 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:16:50.710 -08 000000095 INF: ===================Camera #0 Frame #131===================
17-02-28 20:16:50.745 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.746 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:16:50.746 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:16:50.746 -08 000000084 INF: ===================Camera #2 Frame #133===================
17-02-28 20:16:50.867 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.879 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:16:50.879 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:16:50.879 -08 000000095 INF: ===================Camera #0 Frame #138===================
17-02-28 20:16:50.919 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:16:50.919 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:16:50.919 -08 000000084 INF: ===================Camera #2 Frame #139===================
17-02-28 20:16:51.008 -08 000000064 INF: Y Motor: Unshifted Position: 3441229
17-02-28 20:16:51.050 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:16:51.050 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:16:51.050 -08 000000095 INF: ===================Camera #0 Frame #144===================
17-02-28 20:16:51.058 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:51.088 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:16:51.088 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:16:51.088 -08 000000084 INF: ===================Camera #2 Frame #145===================
17-02-28 20:16:51.181 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:51.218 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:16:51.218 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:16:51.218 -08 000000095 INF: ===================Camera #0 Frame #150===================
17-02-28 20:16:51.257 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:16:51.257 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:16:51.257 -08 000000084 INF: ===================Camera #2 Frame #152===================
17-02-28 20:16:51.318 -08 000000064 INF: Y Motor: Unshifted Position: 3240380
17-02-28 20:16:51.368 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:51.387 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:16:51.387 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:16:51.387 -08 000000095 INF: ===================Camera #0 Frame #156===================
17-02-28 20:16:51.429 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:16:51.429 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:16:51.429 -08 000000084 INF: ===================Camera #2 Frame #158===================
17-02-28 20:16:51.493 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:51.555 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:16:51.555 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:16:51.555 -08 000000095 INF: ===================Camera #0 Frame #162===================
17-02-28 20:16:51.598 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:16:51.598 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:16:51.598 -08 000000084 INF: ===================Camera #2 Frame #164===================
17-02-28 20:16:51.630 -08 000000064 INF: Y Motor: Unshifted Position: 3037371
17-02-28 20:16:51.680 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:51.723 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:16:51.723 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:16:51.723 -08 000000095 INF: ===================Camera #0 Frame #169===================
17-02-28 20:16:51.767 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:16:51.767 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:16:51.767 -08 000000084 INF: ===================Camera #2 Frame #170===================
17-02-28 20:16:51.805 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:51.894 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:16:51.894 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:16:51.894 -08 000000095 INF: ===================Camera #0 Frame #175===================
17-02-28 20:16:51.936 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:16:51.936 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:16:51.936 -08 000000084 INF: ===================Camera #2 Frame #177===================
17-02-28 20:16:51.940 -08 000000064 INF: Y Motor: Unshifted Position: 2834359
17-02-28 20:16:51.990 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.062 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:16:52.062 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:16:52.062 -08 000000095 INF: ===================Camera #0 Frame #181===================
17-02-28 20:16:52.108 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:16:52.108 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:16:52.108 -08 000000084 INF: ===================Camera #2 Frame #183===================
17-02-28 20:16:52.115 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.230 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:16:52.230 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:16:52.230 -08 000000095 INF: ===================Camera #0 Frame #187===================
17-02-28 20:16:52.252 -08 000000064 INF: Y Motor: Unshifted Position: 2630915
17-02-28 20:16:52.277 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:16:52.277 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:16:52.277 -08 000000084 INF: ===================Camera #2 Frame #189===================
17-02-28 20:16:52.302 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.398 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:16:52.398 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:16:52.398 -08 000000095 INF: ===================Camera #0 Frame #194===================
17-02-28 20:16:52.427 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.446 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:16:52.446 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:16:52.446 -08 000000084 INF: ===================Camera #2 Frame #195===================
17-02-28 20:16:52.566 -08 000000064 INF: Y Motor: Unshifted Position: 2428112
17-02-28 20:16:52.569 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:16:52.569 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:16:52.569 -08 000000095 INF: ===================Camera #0 Frame #200===================
17-02-28 20:16:52.615 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:16:52.615 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:16:52.615 -08 000000084 INF: ===================Camera #2 Frame #202===================
17-02-28 20:16:52.616 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.737 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:16:52.737 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:16:52.737 -08 000000095 INF: ===================Camera #0 Frame #206===================
17-02-28 20:16:52.739 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.787 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:16:52.787 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:16:52.787 -08 000000084 INF: ===================Camera #2 Frame #208===================
17-02-28 20:16:52.876 -08 000000064 INF: Y Motor: Unshifted Position: 2225098
17-02-28 20:16:52.905 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:16:52.905 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:16:52.905 -08 000000095 INF: ===================Camera #0 Frame #212===================
17-02-28 20:16:52.926 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.956 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:16:52.956 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:16:52.956 -08 000000084 INF: ===================Camera #2 Frame #214===================
17-02-28 20:16:53.053 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:53.073 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:16:53.073 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:16:53.073 -08 000000095 INF: ===================Camera #0 Frame #218===================
17-02-28 20:16:53.125 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:16:53.125 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:16:53.125 -08 000000084 INF: ===================Camera #2 Frame #220===================
17-02-28 20:16:53.190 -08 000000064 INF: Y Motor: Unshifted Position: 2022949
17-02-28 20:16:53.240 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:53.241 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:16:53.241 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:16:53.241 -08 000000095 INF: ===================Camera #0 Frame #225===================
17-02-28 20:16:53.294 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:16:53.294 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:16:53.294 -08 000000084 INF: ===================Camera #2 Frame #226===================
17-02-28 20:16:53.365 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:53.412 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:16:53.412 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:16:53.412 -08 000000095 INF: ===================Camera #0 Frame #231===================
17-02-28 20:16:53.463 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:16:53.463 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:16:53.463 -08 000000084 INF: ===================Camera #2 Frame #233===================
17-02-28 20:16:53.502 -08 000000064 INF: Y Motor: Unshifted Position: 1819924
17-02-28 20:16:53.552 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:53.580 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:16:53.580 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:16:53.580 -08 000000095 INF: ===================Camera #0 Frame #237===================
17-02-28 20:16:53.635 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:16:53.635 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:16:53.635 -08 000000084 INF: ===================Camera #2 Frame #239===================
17-02-28 20:16:53.677 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:53.748 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:16:53.748 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:16:53.748 -08 000000095 INF: ===================Camera #0 Frame #243===================
17-02-28 20:16:53.804 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:16:53.804 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:16:53.804 -08 000000084 INF: ===================Camera #2 Frame #245===================
17-02-28 20:16:53.814 -08 000000064 INF: Y Motor: Unshifted Position: 1616914
17-02-28 20:16:53.864 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:53.916 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:16:53.916 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:16:53.916 -08 000000095 INF: ===================Camera #0 Frame #249===================
17-02-28 20:16:53.974 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:16:53.974 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:16:53.974 -08 000000084 INF: ===================Camera #2 Frame #252===================
17-02-28 20:16:53.989 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:54.087 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:16:54.087 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:16:54.087 -08 000000095 INF: ===================Camera #0 Frame #256===================
17-02-28 20:16:54.124 -08 000000064 INF: Y Motor: Unshifted Position: 1412804
17-02-28 20:16:54.146 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:16:54.146 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:16:54.146 -08 000000084 INF: ===================Camera #2 Frame #258===================
17-02-28 20:16:54.174 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:54.261 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:16:54.261 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:16:54.261 -08 000000095 INF: ===================Camera #0 Frame #262===================
17-02-28 20:16:54.299 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:54.315 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:16:54.315 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:16:54.315 -08 000000084 INF: ===================Camera #2 Frame #264===================
17-02-28 20:16:54.431 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:16:54.431 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:16:54.431 -08 000000095 INF: ===================Camera #0 Frame #268===================
17-02-28 20:16:54.436 -08 000000064 INF: Y Motor: Unshifted Position: 1210437
17-02-28 20:16:54.484 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:16:54.484 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:16:54.484 -08 000000084 INF: ===================Camera #2 Frame #270===================
17-02-28 20:16:54.486 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:54.559 -08 000000099 INF: FPGA: Recv TDIYWAIT
17-02-28 20:16:54.559 -08 000000057 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:54.561 -08 000000057 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:16:54.561 -08 000000068 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:16:54.562 -08 000000025 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:16:54.562 -08 000000068 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:16:54.562 -08 000000068 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:16:54.562 -08 000000068 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:16:54.562 -08 000000068 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:16:54.562 -08 000000025 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:16:54.562 -08 000000025 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:16:54.562 -08 000000025 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:16:54.563 -08 000000025 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:16:54.601 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:54.601 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:54.601 -08 000000095 INF: ===================Camera #0 Frame #272===================
17-02-28 20:16:54.611 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:54.615 -08 000000095 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:54.616 -08 000000095 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:54.748 -08 000000064 INF: Y Motor: Unshifted Position: 1007634
17-02-28 20:16:54.749 -08 000000095 INF: Camera #0 ReleaseBuffer
17-02-28 20:16:54.749 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:54.749 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:54.749 -08 000000084 INF: ===================Camera #2 Frame #272===================
17-02-28 20:16:54.749 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:16:54.755 -08 000000084 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:54.756 -08 000000084 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:54.778 -08 000000095 INF: ======================================
17-02-28 20:16:54.798 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:54.923 -08 000000084 INF: Camera #2 ReleaseBuffer
17-02-28 20:16:54.923 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:16:54.933 -08 000000092 INF: FPGA: Recv EX1MV
17-02-28 20:16:54.933 -08 000000092 INF: FPGA: Recv EX2MV
17-02-28 20:16:54.933 -08 000000025 INF: Excitation Filter 2: Moved 107 steps in 370.9695 ms
17-02-28 20:16:54.933 -08 000000025 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.068 ms
17-02-28 20:16:54.933 -08 000000068 INF: Excitation Filter 1: Moved 107 steps in 371.1737 ms
17-02-28 20:16:54.933 -08 000000068 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.3101 ms
17-02-28 20:16:54.933 -08 000000068 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.3797 ms
17-02-28 20:16:54.933 -08 000000025 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.1471 ms
17-02-28 20:16:54.933 -08 000000068 INF: ======================================
17-02-28 20:16:54.934 -08 000000025 INF: ======================================
17-02-28 20:16:54.935 -08 000000064 INF: Y Motor: Unshifted Position: 984211
17-02-28 20:16:54.935 -08 000000057 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:54.935 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:54.935 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:54.936 -08 000000057 INF: ======================================
17-02-28 20:16:54.958 -08 000000084 INF: ======================================
17-02-28 20:16:54.960 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:16:54.961 -08 000000074 INF: ======================================
17-02-28 20:16:54.999 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:16:54.999 -08 000000064 INF: Y Motor: Moved to 14.8421 after 7876 ms
17-02-28 20:16:54.999 -08 000000064 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:55.060 -08 000000064 INF: Y Motor: Recv v 4097\r
17-02-28 20:16:55.060 -08 000000064 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:55.060 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:55.124 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:16:55.124 -08 000000064 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:55.124 -08 000000064 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:55.185 -08 000000064 INF: Y Motor: Recv v 134217728\r
17-02-28 20:16:55.185 -08 000000064 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:16:55.185 -08 000000064 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:55.185 -08 000000064 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:55.247 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:16:55.247 -08 000000064 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:55.247 -08 000000064 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:55.247 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:55.311 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:16:55.311 -08 000000064 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:55.311 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:55.375 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:16:55.375 -08 000000064 INF: ======================================
17-02-28 20:16:55.376 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:55.377 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:55.378 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.378 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:16:55.434 -08 000000045 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:16:55.434 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:55.497 -08 000000087 INF: FPGA: Recv TDIYERD 1484213
17-02-28 20:16:55.498 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:16:55.557 -08 000000050 INF: FPGA: Recv ZADCR 35935
17-02-28 20:16:55.557 -08 000000018 INF: At scan end Y pos = 14.842 and Z pos = -0.137. Y moved -48.539 mm
17-02-28 20:16:55.557 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:16:55.621 -08 000000099 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:16:55.621 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:16:55.621 -08 000000018 INF: TDIScan finished after 12638.8897 ms
17-02-28 20:16:55.621 -08 000000018 INF: Image[0]: Y should trigger at 63.381 mm, 2nd row was at 64.290 mm (error = 0.909 mm)
17-02-28 20:16:55.621 -08 000000018 INF: Image[2]: Y should trigger at 63.381 mm, 2nd row was at 64.290 mm (error = 0.909 mm)
17-02-28 20:16:55.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.655 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.897 um
17-02-28 20:16:55.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.656 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:16:55.682 -08 000000050 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:16:55.683 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.683 -08 000000029 INF: ===================Dither Clean Up Command===================
17-02-28 20:16:55.683 -08 000000045 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:16:55.683 -08 000000105 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:16:55.683 -08 000000058 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:16:55.684 -08 000000058 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:16:55.684 -08 000000045 INF: ======================================
17-02-28 20:16:55.684 -08 000000058 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:16:55.684 -08 000000105 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:55.684 -08 000000089 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:55.684 -08 000000090 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:55.684 -08 000000105 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:55.685 -08 000000089 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:16:55.687 -08 000000090 INF: ===================LFT:Extracting coords===================
17-02-28 20:16:55.713 -08 000000090 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:55.713 -08 000000090 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:16:55.714 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.714 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.714 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.714 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.715 -08 000000095 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:55.715 -08 000000039 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:55.715 -08 000000047 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:55.715 -08 000000108 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:55.746 -08 000000052 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:55.746 -08 000000052 INF: FPGA: Recv ZSEL 
17-02-28 20:16:55.746 -08 000000089 INF: FPGA: Xmit ZDACW 36196\n
17-02-28 20:16:55.746 -08 000000058 INF: ======================================
17-02-28 20:16:55.748 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:16:55.748 -08 000000105 INF: ======================================
17-02-28 20:16:55.789 -08 000000095 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:55.789 -08 000000047 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:55.789 -08 000000108 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:55.790 -08 000000039 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:55.807 -08 000000064 INF: FPGA: Recv ZDACW 
17-02-28 20:16:55.807 -08 000000089 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:16:55.808 -08 000000089 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:16:55.869 -08 000000066 INF: FPGA: Recv TDIBB
17-02-28 20:16:55.869 -08 000000089 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:55.870 -08 000000089 INF: ======================================
17-02-28 20:16:55.940 -08 000000047 INF: LFT found best fwhm score 2.113898 in 151 ms
17-02-28 20:16:55.940 -08 000000095 INF: LFT found best fwhm score 2.000036 in 151 ms
17-02-28 20:16:55.940 -08 000000047 INF: LFT found good score at index 7529 with fwhm value 2.113898. Next cycle, cycle 4 starting Z position for top surface is at -0.136 mm FC:A, C:3,L:8,T
17-02-28 20:16:55.940 -08 000000095 INF: LFT found good score at index 8257 with fwhm value 2.000036. Next cycle, cycle 4 starting Z position for top surface is at -0.137 mm FC:A, C:3,L:8,T
17-02-28 20:16:55.940 -08 000000108 INF: LFT found best fwhm score 2.000568 in 151 ms
17-02-28 20:16:55.940 -08 000000108 INF: LFT found good score at index 4545 with fwhm value 2.000568. Next cycle, cycle 4 starting Z position for top surface is at -0.137 mm FC:A, C:3,L:8,T
17-02-28 20:16:55.941 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.941 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.941 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.941 -08 000000047 INF: ======================================
17-02-28 20:16:55.941 -08 000000095 INF: ======================================
17-02-28 20:16:55.941 -08 000000039 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:16:55.941 -08 000000039 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.138594280185607 in the next cycle, cycle 4 FC:A, C:3,L:8,T
17-02-28 20:16:55.941 -08 000000108 INF: ======================================
17-02-28 20:16:55.941 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.942 -08 000000039 INF: ======================================
17-02-28 20:16:55.942 -08 000000090 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:55.943 -08 000000090 INF: LFT weighted average best Z for top surface is at -0.137mm FC:A, C:3,L:8,T
17-02-28 20:16:55.943 -08 000000090 INF: ======================================
17-02-28 20:16:55.944 -08 000000029 INF: ======================================
17-02-28 20:16:55.945 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.946 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:16:55.946 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:16:55.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:16:55.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:16:55.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.948 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011===================
17-02-28 20:16:55.948 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011===================
17-02-28 20:16:55.949 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:16:55.949 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011===================
17-02-28 20:16:55.949 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:16:55.949 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:16:55.972 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:16:55.972 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:55.972 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:55.972 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:55.973 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:16:55.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:55.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:16:55.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:16:55.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:16:55.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:16:55.974 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:16:55.974 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:16:56.051 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":8,"Tile":1201,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF213","HCSMMF191","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.153 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":8,"Tile":1207,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF178","HCSMMF208","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.168 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":8,"Tile":1211,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF187","HCSMMF186","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.169 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":8,"Tile":1205,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF263","HCSMMF243","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.170 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":8,"Tile":1208,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF231","HCSMMF224","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.171 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":8,"Tile":1204,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF276","HCSMMF214","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.174 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":8,"Tile":1203,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF286","HCSMMF252","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.175 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":8,"Tile":1202,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF221","HCSMMF196","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.177 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":8,"Tile":1215,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF265","HCSMMF226","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.178 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":8,"Tile":1216,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF282","HCSMMF217","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.178 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":8,"Tile":1206,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF285","HCSMMF249","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.179 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":8,"Tile":1217,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF246","HCSMMF253","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.180 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":8,"Tile":1214,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF254","HCSMMF250","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.180 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":8,"Tile":1209,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF188","HCSMMF207","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.182 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":8,"Tile":1218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF264","HCSMMF257","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.183 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":8,"Tile":1210,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF209","HCSMMF266","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.183 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":8,"Tile":1223,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF278","HCSMMF237","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.184 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":8,"Tile":1222,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF227","HCSMMF255","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.185 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":8,"Tile":1228,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF220","HCSMMF236","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.186 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":8,"Tile":1212,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF269","HCSMMF202","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.187 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":8,"Tile":1213,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF198","HCSMMF184","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.188 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":8,"Tile":1221,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF212","HCSMMF193","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.189 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":8,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF215","HCSMMF232","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.189 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":8,"Tile":1220,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF206","HCSMMF210","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.190 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":8,"Tile":1225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF182","HCSMMF277","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.191 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":8,"Tile":1219,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF204","HCSMMF259","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.192 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":8,"Tile":1224,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF272","HCSMMF195","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.193 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":8,"Tile":1227,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF199","HCSMMF185","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.212 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:56.218 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:16:56.318 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:56.318 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:16:56.357 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:56.363 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:16:56.372 -08 000000090 INF: FPGA: Recv MIOCOMPR
17-02-28 20:16:56.372 -08 000000018 INF: Compensator: Moved OutOfPath in 397 ms
17-02-28 20:16:56.372 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:16:56.388 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:56.389 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:56.389 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:56.389 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:56.435 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:16:56.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:56.435 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:16:56.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:56.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:56.437 -08 000000053 INF: ===================Move Tilt Motor 1===================
17-02-28 20:16:56.437 -08 000000075 INF: ===================Move Tilt Motor 3===================
17-02-28 20:16:56.437 -08 000000053 INF: Tilt Motor 1: Moving to 5.1808 mm, started at 4.9715 mm, delta = 0.2093 mm
17-02-28 20:16:56.437 -08 000000101 INF: ===================Move Tilt Motor 2===================
17-02-28 20:16:56.438 -08 000000075 INF: Tilt Motor 3: Moving to 5.2697 mm, started at 5.3912 mm, delta = -0.1214 mm
17-02-28 20:16:56.438 -08 000000053 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:56.438 -08 000000101 INF: Tilt Motor 2: Moving to 5.2438 mm, started at 5.3650 mm, delta = -0.1212 mm
17-02-28 20:16:56.439 -08 000000101 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:56.440 -08 000000075 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:56.511 -08 000000051 INF: FPGA: Recv T1RD 19572
17-02-28 20:16:56.512 -08 000000051 INF: FPGA: Recv T2RD 21121
17-02-28 20:16:56.512 -08 000000051 INF: FPGA: Recv T3RD 21225
17-02-28 20:16:56.512 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3537 + 3/6
17-02-28 20:16:56.512 -08 000000075 INF: Tilt Motor 3: Moving to 20747 encoder counts
17-02-28 20:16:56.512 -08 000000101 INF: Tilt Motor 2: Encoder: at motor step 3520 + 1/6
17-02-28 20:16:56.512 -08 000000053 INF: Tilt Motor 1: Encoder: at motor step 3262 + 0/6
17-02-28 20:16:56.512 -08 000000053 INF: Tilt Motor 1: Moving to 20397 encoder counts
17-02-28 20:16:56.512 -08 000000101 INF: Tilt Motor 2: Moving to 20645 encoder counts
17-02-28 20:16:56.512 -08 000000075 INF: FPGA: Xmit T3MOVETO 20747\n
17-02-28 20:16:56.513 -08 000000053 INF: FPGA: Xmit T1MOVETO 20397\n
17-02-28 20:16:56.514 -08 000000064 INF: RunCopyService queue size at 2/28/2017 8:16:56 PM is 10
17-02-28 20:16:56.515 -08 000000101 INF: FPGA: Xmit T2MOVETO 20645\n
17-02-28 20:16:56.554 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:56.560 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:16:56.646 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:56.652 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:16:56.743 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:56.762 -08 000000092 INF: FPGA: Recv T3MOVETO 79
17-02-28 20:16:56.762 -08 000000092 INF: FPGA: Recv T2MOVETO 79
17-02-28 20:16:56.762 -08 000000075 INF: Tilt Motor 3: To move from 5.391 to 5.270 (-0.121 mm) should take 80 steps, but required 79 steps (0.120 mm). Slippage = -0.002 mm (0.01%)
17-02-28 20:16:56.762 -08 000000101 INF: Tilt Motor 2: To move from 5.365 to 5.244 (-0.121 mm) should take 79 steps, but required 79 steps (0.120 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:16:56.762 -08 000000075 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:56.763 -08 000000101 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:56.824 -08 000000105 INF: FPGA: Recv T3RD 20752
17-02-28 20:16:56.824 -08 000000105 INF: FPGA: Recv T2RD 20647
17-02-28 20:16:56.824 -08 000000105 INF: FPGA: Recv T1MOVETO 137
17-02-28 20:16:56.824 -08 000000053 INF: Tilt Motor 1: To move from 4.971 to 5.181 (0.209 mm) should take 138 steps, but required 137 steps (0.209 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:16:56.824 -08 000000053 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:56.825 -08 000000101 INF: Tilt Motor 2: Encoder: at motor step 3441 + 1/6
17-02-28 20:16:56.825 -08 000000101 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:56.825 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:16:56.826 -08 000000075 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:56.886 -08 000000030 INF: FPGA: Recv T1RD 20392
17-02-28 20:16:56.886 -08 000000030 INF: FPGA: Recv T2RD 20647
17-02-28 20:16:56.886 -08 000000030 INF: FPGA: Recv T3RD 20752
17-02-28 20:16:56.886 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:16:56.886 -08 000000101 INF: Tilt Motor 2: Encoder: at motor step 3441 + 1/6
17-02-28 20:16:56.886 -08 000000075 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:56.886 -08 000000053 INF: Tilt Motor 1: Encoder: at motor step 3398 + 4/6
17-02-28 20:16:56.887 -08 000000101 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:56.889 -08 000000053 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:56.948 -08 000000089 INF: FPGA: Recv T3RD 20752
17-02-28 20:16:56.948 -08 000000089 INF: FPGA: Recv T2RD 20647
17-02-28 20:16:56.948 -08 000000089 INF: FPGA: Recv T1RD 20392
17-02-28 20:16:56.948 -08 000000053 INF: Tilt Motor 1: Encoder: at motor step 3398 + 4/6
17-02-28 20:16:56.948 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:16:56.948 -08 000000075 INF: Tilt Motor 3: After move to 5.2697, error = 0.0013, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:56.948 -08 000000053 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:56.948 -08 000000075 INF: Tilt Motor 3: Moved to 5.2710 after 510.8239 ms
17-02-28 20:16:56.948 -08 000000101 INF: Tilt Motor 2: Encoder: at motor step 3441 + 1/6
17-02-28 20:16:56.948 -08 000000101 INF: Tilt Motor 2: After move to 5.2438, error = 0.0005, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:56.948 -08 000000101 INF: Tilt Motor 2: Moved to 5.2443 after 510.882 ms
17-02-28 20:16:56.949 -08 000000101 INF: ======================================
17-02-28 20:16:56.949 -08 000000075 INF: ======================================
17-02-28 20:16:57.012 -08 000000086 INF: FPGA: Recv T1RD 20392
17-02-28 20:16:57.013 -08 000000053 INF: Tilt Motor 1: Encoder: at motor step 3398 + 4/6
17-02-28 20:16:57.013 -08 000000053 INF: Tilt Motor 1: After move to 5.1808, error = -0.0012, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:57.013 -08 000000053 INF: Tilt Motor 1: Moved to 5.1796 after 575.3567 ms
17-02-28 20:16:57.013 -08 000000053 INF: ======================================
17-02-28 20:16:57.014 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:57.015 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:57.016 -08 000000018 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.18080799463558, m2=5.24379999463558, m3=5.26970799463558
17-02-28 20:16:57.022 -08 000000018 INF: Transformed XStagePosition from 6.138931 mm to 6.13893127441406 mm.
17-02-28 20:16:57.029 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:16:57.030 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:16:57.031 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:16:57.031 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:16:57.031 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:16:57.031 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:16:57.035 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:16:57.035 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:16:57.035 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:16:57.072 -08 000000029 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:57.073 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:16:57.073 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:16:57.073 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1381 mm
17-02-28 20:16:57.073 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:16:57.136 -08 000000052 INF: FPGA: Recv ZTRG 
17-02-28 20:16:57.137 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:16:57.196 -08 000000037 INF: FPGA: Recv ZYT 
17-02-28 20:16:57.196 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:16:57.196 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:16:57.262 -08 000000044 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:16:57.262 -08 000000044 INF: FPGA: Recv ZMV 
17-02-28 20:16:57.262 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:16:57.262 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 66.0759 ms
17-02-28 20:16:57.262 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:16:57.321 -08 000000051 INF: FPGA: Recv ZDACR 60292
17-02-28 20:16:57.321 -08 000000018 INF: Z Motor: MoveAndTrigger took 248.2758 ms w/comms
17-02-28 20:16:57.321 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:57.321 -08 000000018 INF: Z Motor: MoveAbsStepped took 248.5587 ms
17-02-28 20:16:57.322 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:16:57.323 -08 000000018 INF: Transformed XStagePosition from 6.138931 mm to 6.13893127441406 mm.
17-02-28 20:16:57.338 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:16:57.338 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:57.339 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:57.339 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:16:57.339 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:16:57.386 -08 000000074 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:57.397 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:16:57.397 -08 000000018 INF: Transformed XStagePosition from 6.138931 mm to 6.13893127441406 mm.
17-02-28 20:16:57.406 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:16:57.406 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:57.406 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:57.408 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:57.408 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:16:57.409 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:57.409 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = A_1
17-02-28 20:16:57.409 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:57.410 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:57.411 -08 000000098 INF: ===================Move X,Y===================
17-02-28 20:16:57.411 -08 000000030 INF: ===================MoveEmissionFilters===================
17-02-28 20:16:57.411 -08 000000098 INF: ===================Move X,Y, Parallel===================
17-02-28 20:16:57.412 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:57.412 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:57.412 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:57.412 -08 000000066 INF: ===================Move X Motor without settling===================
17-02-28 20:16:57.412 -08 000000109 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:57.412 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:57.412 -08 000000066 INF: X Motor: Xmit PR VM\n
17-02-28 20:16:57.412 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:57.412 -08 000000109 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8421 mm
17-02-28 20:16:57.413 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:57.413 -08 000000109 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:57.413 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:57.413 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:57.413 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:57.414 -08 000000085 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:16:57.414 -08 000000075 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:16:57.414 -08 000000104 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:16:57.414 -08 000000090 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:16:57.414 -08 000000051 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:16:57.414 -08 000000023 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:16:57.414 -08 000000075 INF: ======================================
17-02-28 20:16:57.414 -08 000000023 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:16:57.415 -08 000000085 INF: ======================================
17-02-28 20:16:57.415 -08 000000023 INF: ======================================
17-02-28 20:16:57.415 -08 000000104 INF: ======================================
17-02-28 20:16:57.416 -08 000000051 INF: ======================================
17-02-28 20:16:57.416 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:57.417 -08 000000089 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:16:57.417 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:57.417 -08 000000105 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:16:57.417 -08 000000089 INF: ======================================
17-02-28 20:16:57.417 -08 000000090 INF: ======================================
17-02-28 20:16:57.418 -08 000000105 INF: ======================================
17-02-28 20:16:57.418 -08 000000106 INF: ======================================
17-02-28 20:16:57.419 -08 000000025 INF: ======================================
17-02-28 20:16:57.419 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:57.419 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:57.420 -08 000000057 INF: ======================================
17-02-28 20:16:57.421 -08 000000037 INF: ======================================
17-02-28 20:16:57.422 -08 000000030 INF: ======================================
17-02-28 20:16:57.450 -08 000000066 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:16:57.450 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:16:57.450 -08 000000109 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:57.450 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:57.450 -08 000000066 INF: X Motor: Xmit PR VI\n
17-02-28 20:16:57.512 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:16:57.512 -08 000000066 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:16:57.512 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:57.512 -08 000000066 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:16:57.512 -08 000000066 INF: X Motor: Moving to 6.1389 mm @15.000 mm/sec, started at 26.0947 mm
17-02-28 20:16:57.512 -08 000000066 INF: X Motor: Xmit MA -21652\n
17-02-28 20:16:57.574 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:16:57.574 -08 000000066 INF: X Motor: Recv MA -21652\r\n>
17-02-28 20:16:57.574 -08 000000109 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:57.574 -08 000000066 INF: X Motor: WaitUntilStopped 61330
17-02-28 20:16:57.574 -08 000000109 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:16:57.574 -08 000000109 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:16:57.637 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:16:57.637 -08 000000109 INF: Y Motor: Start the move command
17-02-28 20:16:57.637 -08 000000109 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:57.698 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:16:57.698 -08 000000109 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:16:57.698 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:57.824 -08 000000109 INF: Y Motor: Unshifted Position: 1064460
17-02-28 20:16:57.874 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:57.997 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:58.134 -08 000000109 INF: Y Motor: Unshifted Position: 1768364
17-02-28 20:16:58.184 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:58.309 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:58.448 -08 000000109 INF: Y Motor: Unshifted Position: 2553379
17-02-28 20:16:58.498 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:58.622 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:58.758 -08 000000109 INF: Y Motor: Unshifted Position: 3331677
17-02-28 20:16:58.808 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:58.941 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:59.070 -08 000000109 INF: Y Motor: Unshifted Position: 4115114
17-02-28 20:16:59.120 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:59.245 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:59.384 -08 000000109 INF: Y Motor: Unshifted Position: 4897516
17-02-28 20:16:59.434 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:59.446 -08 000000066 INF: X Motor: Xmit PR ER\n
17-02-28 20:16:59.508 -08 000000066 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:16:59.508 -08 000000066 INF: X Motor: Moved to 6.1387 after 1934 ms
17-02-28 20:16:59.508 -08 000000066 INF: ======================================
17-02-28 20:16:59.561 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:59.696 -08 000000109 INF: Y Motor: Unshifted Position: 5668842
17-02-28 20:16:59.746 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:59.870 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:00.006 -08 000000109 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:17:00.006 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:00.006 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:00.072 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:00.072 -08 000000109 INF: Y Motor: Moved to 64.4706 after 2374 ms
17-02-28 20:17:00.072 -08 000000109 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:00.131 -08 000000109 INF: Y Motor: Recv v 4096\r
17-02-28 20:17:00.131 -08 000000109 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:00.131 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:00.193 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:00.193 -08 000000109 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:00.193 -08 000000109 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:00.258 -08 000000109 INF: Y Motor: Recv v 402653184\r
17-02-28 20:17:00.258 -08 000000109 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:17:00.258 -08 000000109 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:00.258 -08 000000109 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:00.320 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:00.320 -08 000000109 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:00.320 -08 000000109 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:00.320 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:00.382 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:00.382 -08 000000109 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:00.382 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:00.444 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:00.444 -08 000000109 INF: ======================================
17-02-28 20:17:00.446 -08 000000098 INF: ===================Move X,Y===================
17-02-28 20:17:00.448 -08 000000098 INF: ======================================
17-02-28 20:17:00.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:00.451 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:00.451 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:17:00.451 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:17:00.506 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:00.506 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:17:00.566 -08 000000095 INF: FPGA: Recv ZFREQCL
17-02-28 20:17:00.566 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:17:00.567 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:00.567 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:00.628 -08 000000066 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:17:00.628 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:17:00.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:00.630 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:00.631 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:17:00.631 -08 000000051 INF: ===================Set YMotor gains for scans===================
17-02-28 20:17:00.631 -08 000000085 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:17:00.631 -08 000000051 INF: ======================================
17-02-28 20:17:00.632 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:17:00.633 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:17:00.634 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:17:00.634 -08 000000085 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:17:00.694 -08 000000086 INF: FPGA: Recv TDIYPOS
17-02-28 20:17:00.695 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:17:00.697 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:17:00.697 -08 000000085 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:17:00.753 -08 000000023 INF: FPGA: Recv TDIYARM2
17-02-28 20:17:00.754 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:17:00.756 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:17:00.758 -08 000000085 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:17:00.759 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:17:00.761 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:17:00.762 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:17:00.764 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:01.143 -08 000000085 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:17:01.143 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:17:01.143 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:01.159 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:17:01.162 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:01.544 -08 000000085 INF: Camera #2 AttachBuffer (imageDataPtr = 53821247560 imgPtr = 53895782648 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:17:01.545 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:17:01.545 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:01.561 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:17:01.563 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:17:01.565 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:17:01.567 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:01.568 -08 000000085 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:17:01.568 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:01.570 -08 000000085 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:17:01.570 -08 000000085 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:17:01.570 -08 000000085 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:17:01.570 -08 000000085 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:17:01.628 -08 000000045 INF: FPGA: Recv ZYT 
17-02-28 20:17:01.628 -08 000000085 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:17:01.628 -08 000000085 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:17:01.690 -08 000000087 INF: FPGA: Recv ZARM
17-02-28 20:17:01.690 -08 000000085 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9131 ms
17-02-28 20:17:01.690 -08 000000085 INF: Z Motor: ArmAbsStepped took 120.1861 ms
17-02-28 20:17:01.691 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:01.693 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:17:01.694 -08 000000085 INF: ======================================
17-02-28 20:17:01.696 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:01.698 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:01.698 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:01.699 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:01.700 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:01.701 -08 000000038 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:17:01.701 -08 000000038 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:17:01.701 -08 000000038 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:17:01.701 -08 000000038 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:17:01.701 -08 000000023 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:17:01.701 -08 000000038 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:17:01.701 -08 000000023 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:17:01.701 -08 000000023 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:17:01.701 -08 000000023 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:17:01.703 -08 000000023 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:17:02.064 -08 000000052 INF: FPGA: Recv EX2MV
17-02-28 20:17:02.064 -08 000000052 INF: FPGA: Recv EX1MV
17-02-28 20:17:02.064 -08 000000023 INF: Excitation Filter 1: Moved -107 steps in 362.5451 ms
17-02-28 20:17:02.064 -08 000000038 INF: Excitation Filter 2: Moved -107 steps in 362.9583 ms
17-02-28 20:17:02.064 -08 000000023 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 362.7367 ms
17-02-28 20:17:02.064 -08 000000023 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 362.8621 ms
17-02-28 20:17:02.064 -08 000000038 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 363.0841 ms
17-02-28 20:17:02.064 -08 000000038 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 363.3142 ms
17-02-28 20:17:02.065 -08 000000023 INF: ======================================
17-02-28 20:17:02.065 -08 000000038 INF: ======================================
17-02-28 20:17:02.067 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:02.068 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:02.069 -08 000000089 INF: ===================Serial===================
17-02-28 20:17:02.069 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:17:02.069 -08 000000098 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:02.069 -08 000000045 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:02.070 -08 000000089 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:17:02.070 -08 000000089 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:17:02.070 -08 000000047 INF: ===================Camera TDI, Parallel===================
17-02-28 20:17:02.071 -08 000000098 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:17:02.071 -08 000000099 INF: ===================Camera TDI===================
17-02-28 20:17:02.071 -08 000000098 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:17:02.071 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:17:02.071 -08 000000045 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:17:02.071 -08 000000045 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:02.071 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:02.072 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.072 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.073 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.073 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.128 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:17:02.128 -08 000000045 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:02.128 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:02.190 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:17:02.190 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:02.222 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.222 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.223 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.223 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.256 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:17:02.256 -08 000000045 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:02.256 -08 000000045 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:17:02.256 -08 000000045 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:17:02.318 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:17:02.318 -08 000000045 INF: Y Motor: Start the move command
17-02-28 20:17:02.318 -08 000000045 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:02.372 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.372 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.373 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.373 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.377 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:17:02.377 -08 000000045 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:17:02.377 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:02.504 -08 000000045 INF: Y Motor: Unshifted Position: 5929035
17-02-28 20:17:02.522 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.522 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.523 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.523 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.554 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:02.672 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:17:02.672 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:17:02.672 -08 000000099 INF: ===================Camera #0 Frame #1===================
17-02-28 20:17:02.673 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:17:02.673 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:17:02.673 -08 000000030 INF: ===================Camera #2 Frame #1===================
17-02-28 20:17:02.678 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:02.814 -08 000000045 INF: Y Motor: Unshifted Position: 5882530
17-02-28 20:17:02.825 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:17:02.825 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:17:02.825 -08 000000099 INF: ===================Camera #0 Frame #3===================
17-02-28 20:17:02.826 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:17:02.826 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:17:02.826 -08 000000030 INF: ===================Camera #2 Frame #3===================
17-02-28 20:17:02.864 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:02.982 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:17:02.982 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:17:02.982 -08 000000099 INF: ===================Camera #0 Frame #4===================
17-02-28 20:17:02.983 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:17:02.983 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:17:02.983 -08 000000030 INF: ===================Camera #2 Frame #4===================
17-02-28 20:17:02.991 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:03.129 -08 000000045 INF: Y Motor: Unshifted Position: 5835524
17-02-28 20:17:03.135 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:03.135 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:03.135 -08 000000099 INF: ===================Camera #0 Frame #5===================
17-02-28 20:17:03.136 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:03.136 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:03.136 -08 000000030 INF: ===================Camera #2 Frame #5===================
17-02-28 20:17:03.179 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:03.188 -08 000000057 INF: FPGA: Recv ZWAIT 
17-02-28 20:17:03.188 -08 000000057 INF: FPGA: Recv TDIYWAIT
17-02-28 20:17:03.188 -08 000000089 INF: ===================Serial===================
17-02-28 20:17:03.189 -08 000000098 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:03.190 -08 000000089 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:17:03.190 -08 000000098 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:17:03.190 -08 000000089 INF: ===================Serial===================
17-02-28 20:17:03.191 -08 000000060 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:17:03.191 -08 000000074 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:17:03.191 -08 000000060 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:17:03.191 -08 000000060 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:17:03.191 -08 000000060 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:17:03.191 -08 000000074 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:17:03.191 -08 000000060 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:17:03.191 -08 000000074 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:17:03.191 -08 000000074 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:17:03.192 -08 000000089 INF: ======================================
17-02-28 20:17:03.194 -08 000000074 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:17:03.288 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:17:03.288 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:17:03.288 -08 000000099 INF: ===================Camera #0 Frame #6===================
17-02-28 20:17:03.289 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:17:03.289 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:17:03.289 -08 000000030 INF: ===================Camera #2 Frame #6===================
17-02-28 20:17:03.291 -08 000000099 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:17:03.292 -08 000000099 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:03.292 -08 000000030 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:17:03.293 -08 000000030 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:03.304 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:03.318 -08 000000099 INF: Camera #0 ReleaseBuffer
17-02-28 20:17:03.318 -08 000000099 INF: ===================Camera TDI===================
17-02-28 20:17:03.319 -08 000000099 INF: ======================================
17-02-28 20:17:03.342 -08 000000030 INF: Camera #2 ReleaseBuffer
17-02-28 20:17:03.342 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:17:03.343 -08 000000030 INF: ======================================
17-02-28 20:17:03.345 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:17:03.346 -08 000000047 INF: ======================================
17-02-28 20:17:03.438 -08 000000045 INF: Y Motor: Unshifted Position: 5790764
17-02-28 20:17:03.488 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:03.563 -08 000000090 INF: FPGA: Recv EX1MV
17-02-28 20:17:03.563 -08 000000090 INF: FPGA: Recv EX2MV
17-02-28 20:17:03.563 -08 000000060 INF: Excitation Filter 1: Moved 107 steps in 371.5505 ms
17-02-28 20:17:03.563 -08 000000060 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.6724 ms
17-02-28 20:17:03.563 -08 000000060 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.75 ms
17-02-28 20:17:03.563 -08 000000074 INF: Excitation Filter 2: Moved 107 steps in 371.4124 ms
17-02-28 20:17:03.563 -08 000000074 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8652 ms
17-02-28 20:17:03.563 -08 000000074 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.937 ms
17-02-28 20:17:03.563 -08 000000060 INF: ======================================
17-02-28 20:17:03.564 -08 000000074 INF: ======================================
17-02-28 20:17:03.565 -08 000000098 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:03.566 -08 000000098 INF: ======================================
17-02-28 20:17:03.627 -08 000000045 INF: Y Motor: Unshifted Position: 5790743
17-02-28 20:17:03.627 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:03.627 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:03.689 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:17:03.689 -08 000000045 INF: Y Motor: Moved to 62.9074 after 1312 ms
17-02-28 20:17:03.689 -08 000000045 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:03.753 -08 000000045 INF: Y Motor: Recv v 4097\r
17-02-28 20:17:03.753 -08 000000045 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:03.753 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:03.815 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:17:03.815 -08 000000045 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:03.815 -08 000000045 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:03.875 -08 000000045 INF: Y Motor: Recv v 134217728\r
17-02-28 20:17:03.875 -08 000000045 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:17:03.875 -08 000000045 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:03.875 -08 000000045 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:03.937 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:17:03.937 -08 000000045 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:03.937 -08 000000045 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:03.937 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:04.002 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:17:04.002 -08 000000045 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:04.002 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:04.064 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:17:04.064 -08 000000045 INF: ======================================
17-02-28 20:17:04.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:04.066 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:04.067 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.067 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:17:04.123 -08 000000087 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:17:04.123 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:04.189 -08 000000060 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:17:04.190 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:17:04.249 -08 000000066 INF: FPGA: Recv ZADCR 2423
17-02-28 20:17:04.249 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:17:04.249 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:17:04.311 -08 000000047 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:17:04.311 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:17:04.311 -08 000000018 INF: TDIScan finished after 6914.5307 ms
17-02-28 20:17:04.311 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:17:04.311 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:17:04.311 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:17:04.373 -08 000000066 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:17:04.374 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.374 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.375 -08 000000085 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:17:04.375 -08 000000109 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:17:04.376 -08 000000085 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:17:04.376 -08 000000085 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:17:04.376 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:17:04.376 -08 000000109 INF: ======================================
17-02-28 20:17:04.376 -08 000000086 INF: ======================================
17-02-28 20:17:04.437 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:17:04.437 -08 000000085 INF: ======================================
17-02-28 20:17:04.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:17:04.479 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.480 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:17:04.536 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.537 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:17:04.561 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.561 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:17:04.610 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.610 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:17:04.610 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:17:04.611 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:17:04.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:17:04.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-02-28 20:17:04.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:17:05.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-02-28 20:17:05.266 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0506907652918959Best Z position at top surface = -0.123520241324241Best Z position at top surface + compensator offset = -0.100820241324241 C:3,L:1,B
17-02-28 20:17:05.268 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.123520241324241
17-02-28 20:17:05.268 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.73835
17-02-28 20:17:05.268 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0506907652918959
17-02-28 20:17:05.268 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.38749
17-02-28 20:17:05.268 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0506907652918959.
17-02-28 20:17:05.268 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:17:05.401 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:17:05.401 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:17:05.435 -08 000000030 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:05.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:17:05.437 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.439 -08 000000053 INF: ===================Move Tilt Motor 2===================
17-02-28 20:17:05.439 -08 000000098 INF: ===================Move Tilt Motor 3===================
17-02-28 20:17:05.439 -08 000000109 INF: ===================Move Tilt Motor 1===================
17-02-28 20:17:05.440 -08 000000098 INF: Tilt Motor 3: Moving to 5.2697 mm, started at 5.2710 mm, delta = -0.0013 mm
17-02-28 20:17:05.440 -08 000000053 INF: ======================================
17-02-28 20:17:05.440 -08 000000098 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:05.440 -08 000000109 INF: Tilt Motor 1: Moving to 5.1808 mm, started at 5.1796 mm, delta = 0.0012 mm
17-02-28 20:17:05.441 -08 000000109 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:05.495 -08 000000044 INF: FPGA: Recv T3RD 20752
17-02-28 20:17:05.495 -08 000000044 INF: FPGA: Recv T1RD 20391
17-02-28 20:17:05.495 -08 000000098 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:17:05.495 -08 000000098 INF: Tilt Motor 3: Moving to 20747 encoder counts
17-02-28 20:17:05.495 -08 000000109 INF: Tilt Motor 1: Encoder: at motor step 3398 + 3/6
17-02-28 20:17:05.495 -08 000000109 INF: Tilt Motor 1: Moving to 20397 encoder counts
17-02-28 20:17:05.495 -08 000000098 INF: FPGA: Xmit T3MOVETO 20747\n
17-02-28 20:17:05.496 -08 000000109 INF: FPGA: Xmit T1MOVETO 20397\n
17-02-28 20:17:05.562 -08 000000074 INF: FPGA: Recv T1MOVETO 0
17-02-28 20:17:05.562 -08 000000074 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:17:05.562 -08 000000098 INF: Tilt Motor 3: To move from 5.271 to 5.270 (-0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:17:05.563 -08 000000109 INF: Tilt Motor 1: To move from 5.179 to 5.181 (0.001 mm) should take 1 steps, but required 0 steps (0.000 mm). Slippage = -0.002 mm (-1.23%)
17-02-28 20:17:05.563 -08 000000098 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:05.564 -08 000000109 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:05.622 -08 000000039 INF: FPGA: Recv T3RD 20746
17-02-28 20:17:05.622 -08 000000039 INF: FPGA: Recv T1RD 20393
17-02-28 20:17:05.622 -08 000000109 INF: Tilt Motor 1: Encoder: at motor step 3398 + 5/6
17-02-28 20:17:05.622 -08 000000109 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:05.622 -08 000000098 INF: Tilt Motor 3: Encoder: at motor step 3457 + 4/6
17-02-28 20:17:05.623 -08 000000098 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:05.684 -08 000000105 INF: FPGA: Recv T1RD 20393
17-02-28 20:17:05.684 -08 000000105 INF: FPGA: Recv T3RD 20746
17-02-28 20:17:05.684 -08 000000098 INF: Tilt Motor 3: Encoder: at motor step 3457 + 4/6
17-02-28 20:17:05.684 -08 000000098 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:05.684 -08 000000109 INF: Tilt Motor 1: Encoder: at motor step 3398 + 5/6
17-02-28 20:17:05.685 -08 000000109 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:05.746 -08 000000066 INF: FPGA: Recv T3RD 20746
17-02-28 20:17:05.746 -08 000000066 INF: FPGA: Recv T1RD 20393
17-02-28 20:17:05.746 -08 000000109 INF: Tilt Motor 1: Encoder: at motor step 3398 + 5/6
17-02-28 20:17:05.746 -08 000000109 INF: Tilt Motor 1: After move to 5.1808, error = -0.0010, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:05.746 -08 000000098 INF: Tilt Motor 3: Encoder: at motor step 3457 + 4/6
17-02-28 20:17:05.746 -08 000000109 INF: Tilt Motor 1: Moved to 5.1798 after 306.1744 ms
17-02-28 20:17:05.746 -08 000000098 INF: Tilt Motor 3: After move to 5.2697, error = -0.0002, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:05.746 -08 000000098 INF: Tilt Motor 3: Moved to 5.2695 after 306.6062 ms
17-02-28 20:17:05.746 -08 000000109 INF: ======================================
17-02-28 20:17:05.746 -08 000000098 INF: ======================================
17-02-28 20:17:05.748 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.748 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.749 -08 000000018 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.18080799463558, m2=5.24379999463558, m3=5.26970799463558
17-02-28 20:17:05.749 -08 000000018 INF: ETF Best Z: -0.05069077 mm (13288 DAC)
17-02-28 20:17:05.749 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.750 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.750 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:17:05.751 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.751 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:06.148 -08 000000018 INF: Swath 1 position calculated to be: {X=5.567337, Y=39.70494} from estimated center X= 6.061996, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:17:06.148 -08 000000018 INF: Swath 2 position calculated to be: {X=6.675336, Y=39.70494} from estimated center X= 6.061996, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:17:06.155 -08 000000018 INF: Swath 0: Converted transform from (99.46274, -64.47903) pixels to (0.034155, -0.02208) mm.
17-02-28 20:17:06.161 -08 000000018 INF: Swath 1: Converted transform from (63.43083, -63.16562) pixels to (0.021735, -0.021735) mm.
17-02-28 20:17:06.162 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494===================
17-02-28 20:17:06.162 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494===================
17-02-28 20:17:06.163 -08 000000018 INF: Transformed XStagePosition from 5.567337 mm to 5.60149155929685 mm.
17-02-28 20:17:06.174 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4728657392562 mm.
17-02-28 20:17:06.174 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2728657392561 mm.
17-02-28 20:17:06.174 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3636157392561 mm.
17-02-28 20:17:06.176 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:06.177 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:17:06.177 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:06.177 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = A_1
17-02-28 20:17:06.183 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:06.183 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:06.184 -08 000000099 INF: ===================MoveEmissionFilters===================
17-02-28 20:17:06.184 -08 000000025 INF: ===================Move X,Y===================
17-02-28 20:17:06.184 -08 000000089 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:06.185 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:06.185 -08 000000025 INF: ===================Move X,Y, Parallel===================
17-02-28 20:17:06.185 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:06.185 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:06.185 -08 000000101 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:06.185 -08 000000089 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:17:06.185 -08 000000089 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:17:06.185 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:06.185 -08 000000089 INF: Z Motor: Moving to -0.0707 mm, started at -0.0100 mm
17-02-28 20:17:06.186 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:06.186 -08 000000089 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:17:06.186 -08 000000023 INF: ===================Move X Motor without settling===================
17-02-28 20:17:06.186 -08 000000038 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:06.186 -08 000000101 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:06.186 -08 000000023 INF: X Motor: Xmit PR VM\n
17-02-28 20:17:06.186 -08 000000038 INF: Y Motor: Moving to 64.4729 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:17:06.186 -08 000000037 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:17:06.186 -08 000000082 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:17:06.186 -08 000000057 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:17:06.187 -08 000000082 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:17:06.187 -08 000000038 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:06.187 -08 000000038 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:06.187 -08 000000105 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:17:06.187 -08 000000058 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:17:06.187 -08 000000057 INF: ======================================
17-02-28 20:17:06.187 -08 000000105 INF: ======================================
17-02-28 20:17:06.188 -08 000000058 INF: ======================================
17-02-28 20:17:06.188 -08 000000090 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:17:06.188 -08 000000037 INF: ======================================
17-02-28 20:17:06.188 -08 000000082 INF: ======================================
17-02-28 20:17:06.188 -08 000000090 INF: ======================================
17-02-28 20:17:06.188 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:06.189 -08 000000101 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:06.189 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:06.189 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:06.189 -08 000000010 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:17:06.190 -08 000000098 INF: ======================================
17-02-28 20:17:06.190 -08 000000101 INF: ======================================
17-02-28 20:17:06.190 -08 000000058 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:17:06.190 -08 000000010 INF: ======================================
17-02-28 20:17:06.190 -08 000000058 INF: ======================================
17-02-28 20:17:06.190 -08 000000066 INF: ======================================
17-02-28 20:17:06.191 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:06.192 -08 000000109 INF: ======================================
17-02-28 20:17:06.193 -08 000000099 INF: ======================================
17-02-28 20:17:06.197 -08 000000052 INF: FPGA: Recv ZTRG 
17-02-28 20:17:06.197 -08 000000089 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:17:06.263 -08 000000058 INF: FPGA: Recv ZYT 
17-02-28 20:17:06.263 -08 000000089 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:17:06.263 -08 000000089 INF: FPGA: Xmit ZMV 18531\n
17-02-28 20:17:06.265 -08 000000023 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:17:06.265 -08 000000023 INF: X Motor: Xmit PR VI\n
17-02-28 20:17:06.266 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:17:06.266 -08 000000038 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:06.266 -08 000000038 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:06.325 -08 000000051 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:17:06.325 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:17:06.327 -08 000000023 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:17:06.327 -08 000000023 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:17:06.327 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:17:06.327 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:06.327 -08 000000023 INF: X Motor: Moving to 5.6015 mm @15.000 mm/sec, started at 6.1387 mm
17-02-28 20:17:06.327 -08 000000023 INF: X Motor: Xmit MA -21872\n
17-02-28 20:17:06.387 -08 000000090 INF: FPGA: Recv ZMV 
17-02-28 20:17:06.387 -08 000000089 INF: Z Motor: MoveAndTrigger 'ZMV' command took 123.8365 ms
17-02-28 20:17:06.387 -08 000000089 INF: FPGA: Xmit ZDACR\n
17-02-28 20:17:06.389 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:17:06.389 -08 000000038 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:06.389 -08 000000023 INF: X Motor: Recv MA -21872\r\n>
17-02-28 20:17:06.389 -08 000000038 INF: Y Motor: Set target position to 5947287 encoder counts
17-02-28 20:17:06.389 -08 000000038 INF: Y Motor: Xmit s r0xca 5947287\r
17-02-28 20:17:06.389 -08 000000023 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:17:06.449 -08 000000085 INF: FPGA: Recv ZDACR 18531
17-02-28 20:17:06.449 -08 000000089 INF: Z Motor: MoveAndTrigger took 262.6192 ms w/comms
17-02-28 20:17:06.449 -08 000000089 INF: Z Motor: After move to -0.0707, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:06.449 -08 000000089 INF: Z Motor: MoveAbsStepped took 262.9606 ms
17-02-28 20:17:06.450 -08 000000089 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:06.451 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:17:06.451 -08 000000038 INF: Y Motor: Start the move command
17-02-28 20:17:06.451 -08 000000038 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:06.451 -08 000000089 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:17:06.452 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:17:06.452 -08 000000057 INF: ===================Camera Arm TDI===================
17-02-28 20:17:06.453 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:06.453 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:06.453 -08 000000099 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:06.454 -08 000000099 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:06.454 -08 000000057 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:06.454 -08 000000099 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:17:06.511 -08 000000075 INF: FPGA: Recv ZSEL 
17-02-28 20:17:06.512 -08 000000099 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:06.512 -08 000000099 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:17:06.513 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:17:06.513 -08 000000038 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:17:06.513 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:06.573 -08 000000046 INF: FPGA: Recv TDIBB
17-02-28 20:17:06.573 -08 000000099 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:06.574 -08 000000099 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:06.575 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:06.576 -08 000000099 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:17:06.576 -08 000000099 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:17:06.576 -08 000000099 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:17:06.635 -08 000000047 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:06.635 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:06.637 -08 000000038 INF: Y Motor: Unshifted Position: 5872214
17-02-28 20:17:06.637 -08 000000099 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:17:06.637 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:06.639 -08 000000099 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:17:06.639 -08 000000099 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:17:06.639 -08 000000099 INF: Z Motor: Arming to move to -0.0307 mm
17-02-28 20:17:06.639 -08 000000099 INF: FPGA: Xmit ZYT 6427287 4\n
17-02-28 20:17:06.687 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:06.697 -08 000000051 INF: FPGA: Recv ZYT 
17-02-28 20:17:06.697 -08 000000099 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6372214 enc / 63.722 mm / ) = 6427287 enc / 64.273 mm
17-02-28 20:17:06.697 -08 000000099 INF: FPGA: Xmit ZARM 8045\n
17-02-28 20:17:06.762 -08 000000060 INF: FPGA: Recv ZARM
17-02-28 20:17:06.762 -08 000000099 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.9449 ms
17-02-28 20:17:06.762 -08 000000099 INF: Z Motor: ArmAbsStepped took 122.7332 ms
17-02-28 20:17:06.762 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:06.764 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:17:06.765 -08 000000099 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:17:06.766 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:17:06.767 -08 000000099 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:17:06.768 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:17:06.769 -08 000000099 INF: ======================================
17-02-28 20:17:06.814 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:06.826 -08 000000023 INF: X Motor: Xmit PR ER\n
17-02-28 20:17:06.888 -08 000000023 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:17:06.888 -08 000000023 INF: X Motor: Moved to 5.6016 after 498 ms
17-02-28 20:17:06.888 -08 000000023 INF: ======================================
17-02-28 20:17:06.950 -08 000000038 INF: Y Motor: Unshifted Position: 5947288
17-02-28 20:17:06.950 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:06.950 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:07.012 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:17:07.012 -08 000000038 INF: Y Motor: Moved to 64.4729 after 499 ms
17-02-28 20:17:07.012 -08 000000038 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:07.074 -08 000000038 INF: Y Motor: Recv v 4096\r
17-02-28 20:17:07.074 -08 000000038 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:07.074 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:07.136 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:17:07.136 -08 000000038 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:07.136 -08 000000038 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:07.199 -08 000000038 INF: Y Motor: Recv v 402653184\r
17-02-28 20:17:07.199 -08 000000038 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:17:07.199 -08 000000038 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:07.199 -08 000000038 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:07.261 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:17:07.261 -08 000000038 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:07.261 -08 000000038 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:07.261 -08 000000038 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:07.323 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:17:07.323 -08 000000038 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:07.323 -08 000000038 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:07.388 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:17:07.388 -08 000000038 INF: ======================================
17-02-28 20:17:07.389 -08 000000025 INF: ===================Move X,Y===================
17-02-28 20:17:07.390 -08 000000025 INF: ======================================
17-02-28 20:17:07.422 -08 000000057 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:07.422 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:07.422 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:07.437 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:07.439 -08 000000057 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:08.491 -08 000000057 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:08.492 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:08.492 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:08.507 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:08.509 -08 000000057 INF: ===================Camera Arm TDI===================
17-02-28 20:17:08.510 -08 000000057 INF: ======================================
17-02-28 20:17:08.511 -08 000000089 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:08.512 -08 000000089 INF: ======================================
17-02-28 20:17:08.513 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:08.514 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:08.514 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:17:08.514 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:17:08.572 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:08.572 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:17:08.632 -08 000000030 INF: FPGA: Recv ZFREQCL
17-02-28 20:17:08.632 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:17:08.632 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:08.632 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:08.694 -08 000000101 INF: FPGA: Recv TDIYERD 6447288
17-02-28 20:17:08.694 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447288 counts (64.473 mm)
17-02-28 20:17:08.694 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:08.695 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:08.695 -08 000000098 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:08.695 -08 000000025 INF: ===================Set YMotor gains for scans===================
17-02-28 20:17:08.696 -08 000000025 INF: ======================================
17-02-28 20:17:08.696 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:08.697 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:17:08.697 -08 000000098 INF: FPGA: Xmit TDIYPOS 6336362\n
17-02-28 20:17:08.756 -08 000000085 INF: FPGA: Recv TDIYPOS
17-02-28 20:17:08.756 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:08.757 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:17:08.758 -08 000000098 INF: FPGA: Xmit TDIYARM3 139264 6427287 1 1\n
17-02-28 20:17:08.821 -08 000000074 INF: FPGA: Recv TDIYARM3
17-02-28 20:17:08.821 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:08.822 -08 000000098 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:08.823 -08 000000098 INF: ======================================
17-02-28 20:17:08.824 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:08.825 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:08.825 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:08.825 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:08.826 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:08.827 -08 000000075 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:17:08.827 -08 000000108 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:17:08.827 -08 000000075 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:17:08.827 -08 000000075 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:17:08.827 -08 000000075 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:17:08.827 -08 000000108 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:17:08.827 -08 000000075 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:17:08.827 -08 000000108 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:17:08.827 -08 000000108 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:17:08.828 -08 000000108 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:17:09.194 -08 000000023 INF: FPGA: Recv EX2MV
17-02-28 20:17:09.194 -08 000000023 INF: FPGA: Recv EX1MV
17-02-28 20:17:09.194 -08 000000075 INF: Excitation Filter 2: Moved -107 steps in 367.1097 ms
17-02-28 20:17:09.194 -08 000000075 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.2378 ms
17-02-28 20:17:09.194 -08 000000075 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.3074 ms
17-02-28 20:17:09.194 -08 000000108 INF: Excitation Filter 1: Moved -107 steps in 366.9968 ms
17-02-28 20:17:09.194 -08 000000108 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.4154 ms
17-02-28 20:17:09.194 -08 000000075 INF: ======================================
17-02-28 20:17:09.194 -08 000000108 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.4819 ms
17-02-28 20:17:09.195 -08 000000108 INF: ======================================
17-02-28 20:17:09.195 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:09.197 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:09.197 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:17:09.197 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:09.197 -08 000000052 INF: ===================FPGA Z Wait===================
17-02-28 20:17:09.198 -08 000000037 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:09.198 -08 000000037 INF: Y Motor: Moving to 14.8245 mm @6.500 mm/sec, started at 64.4729 mm
17-02-28 20:17:09.198 -08 000000037 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:09.198 -08 000000037 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:09.198 -08 000000052 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:17:09.198 -08 000000047 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:17:09.198 -08 000000105 INF: ===================Camera TDI, Parallel===================
17-02-28 20:17:09.199 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:17:09.199 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:17:09.201 -08 000000047 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:17:09.201 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:09.201 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:09.201 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:09.201 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:09.258 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:17:09.258 -08 000000037 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:09.258 -08 000000037 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:09.321 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:17:09.321 -08 000000037 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:09.352 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:09.352 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:09.352 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:09.352 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:09.382 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:17:09.382 -08 000000037 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:09.382 -08 000000037 INF: Y Motor: Set target position to 982453 encoder counts
17-02-28 20:17:09.382 -08 000000037 INF: Y Motor: Xmit s r0xca 982453\r
17-02-28 20:17:09.447 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:17:09.447 -08 000000037 INF: Y Motor: Start the move command
17-02-28 20:17:09.447 -08 000000037 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:09.502 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:09.502 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:09.502 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:09.502 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:09.509 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:17:09.509 -08 000000037 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:17:09.509 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:09.569 -08 000000109 INF: FPGA: Recv ZWAIT 
17-02-28 20:17:09.569 -08 000000052 INF: ======================================
17-02-28 20:17:09.633 -08 000000037 INF: Y Motor: Unshifted Position: 5885431
17-02-28 20:17:09.652 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:09.652 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:09.652 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:09.652 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:09.652 -08 000000050 INF: ===================Camera #2 Frame #5===================
17-02-28 20:17:09.652 -08 000000053 INF: ===================Camera #0 Frame #5===================
17-02-28 20:17:09.683 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:09.807 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:09.817 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:09.817 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:09.817 -08 000000053 INF: ===================Camera #0 Frame #11===================
17-02-28 20:17:09.818 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:09.818 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:09.818 -08 000000050 INF: ===================Camera #2 Frame #11===================
17-02-28 20:17:09.946 -08 000000037 INF: Y Motor: Unshifted Position: 5681983
17-02-28 20:17:09.985 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:09.985 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:09.985 -08 000000053 INF: ===================Camera #0 Frame #17===================
17-02-28 20:17:09.987 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:09.987 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:09.987 -08 000000050 INF: ===================Camera #2 Frame #17===================
17-02-28 20:17:09.996 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.120 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.153 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:17:10.153 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:17:10.153 -08 000000053 INF: ===================Camera #0 Frame #23===================
17-02-28 20:17:10.156 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:17:10.156 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:17:10.156 -08 000000050 INF: ===================Camera #2 Frame #23===================
17-02-28 20:17:10.256 -08 000000037 INF: Y Motor: Unshifted Position: 5480278
17-02-28 20:17:10.306 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.321 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:17:10.321 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:17:10.321 -08 000000053 INF: ===================Camera #0 Frame #29===================
17-02-28 20:17:10.325 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:17:10.325 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:17:10.325 -08 000000050 INF: ===================Camera #2 Frame #29===================
17-02-28 20:17:10.433 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.489 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:17:10.489 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:17:10.489 -08 000000053 INF: ===================Camera #0 Frame #35===================
17-02-28 20:17:10.494 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:17:10.494 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:17:10.494 -08 000000050 INF: ===================Camera #2 Frame #36===================
17-02-28 20:17:10.569 -08 000000037 INF: Y Motor: Unshifted Position: 5276819
17-02-28 20:17:10.619 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.657 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:17:10.657 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:17:10.657 -08 000000053 INF: ===================Camera #0 Frame #42===================
17-02-28 20:17:10.667 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:17:10.667 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:17:10.667 -08 000000050 INF: ===================Camera #2 Frame #42===================
17-02-28 20:17:10.743 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.830 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:17:10.830 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:17:10.830 -08 000000053 INF: ===================Camera #0 Frame #48===================
17-02-28 20:17:10.838 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:17:10.838 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:17:10.838 -08 000000050 INF: ===================Camera #2 Frame #48===================
17-02-28 20:17:10.883 -08 000000037 INF: Y Motor: Unshifted Position: 5075101
17-02-28 20:17:10.933 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.998 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:17:10.998 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:17:10.998 -08 000000053 INF: ===================Camera #0 Frame #54===================
17-02-28 20:17:11.008 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:17:11.008 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:17:11.008 -08 000000050 INF: ===================Camera #2 Frame #54===================
17-02-28 20:17:11.057 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:11.167 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:17:11.167 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:17:11.167 -08 000000053 INF: ===================Camera #0 Frame #60===================
17-02-28 20:17:11.178 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:17:11.178 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:17:11.178 -08 000000050 INF: ===================Camera #2 Frame #61===================
17-02-28 20:17:11.194 -08 000000037 INF: Y Motor: Unshifted Position: 4871003
17-02-28 20:17:11.244 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:11.336 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:17:11.336 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:17:11.336 -08 000000053 INF: ===================Camera #0 Frame #67===================
17-02-28 20:17:11.351 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:17:11.351 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:17:11.351 -08 000000050 INF: ===================Camera #2 Frame #67===================
17-02-28 20:17:11.368 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:11.504 -08 000000037 INF: Y Motor: Unshifted Position: 4668637
17-02-28 20:17:11.509 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:17:11.509 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:17:11.509 -08 000000053 INF: ===================Camera #0 Frame #73===================
17-02-28 20:17:11.522 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:17:11.522 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:17:11.522 -08 000000050 INF: ===================Camera #2 Frame #73===================
17-02-28 20:17:11.554 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:11.678 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:17:11.678 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:17:11.678 -08 000000053 INF: ===================Camera #0 Frame #79===================
17-02-28 20:17:11.681 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:11.692 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:17:11.692 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:17:11.692 -08 000000050 INF: ===================Camera #2 Frame #80===================
17-02-28 20:17:11.817 -08 000000037 INF: Y Motor: Unshifted Position: 4464955
17-02-28 20:17:11.848 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:17:11.848 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:17:11.848 -08 000000053 INF: ===================Camera #0 Frame #85===================
17-02-28 20:17:11.866 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:17:11.866 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:17:11.866 -08 000000050 INF: ===================Camera #2 Frame #86===================
17-02-28 20:17:11.867 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:11.991 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:12.017 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:17:12.017 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:17:12.017 -08 000000053 INF: ===================Camera #0 Frame #92===================
17-02-28 20:17:12.037 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:17:12.037 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:17:12.037 -08 000000050 INF: ===================Camera #2 Frame #92===================
17-02-28 20:17:12.131 -08 000000037 INF: Y Motor: Unshifted Position: 4263243
17-02-28 20:17:12.181 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:12.190 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:17:12.190 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:17:12.190 -08 000000053 INF: ===================Camera #0 Frame #98===================
17-02-28 20:17:12.208 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:17:12.208 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:17:12.208 -08 000000050 INF: ===================Camera #2 Frame #99===================
17-02-28 20:17:12.305 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:12.360 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:17:12.360 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:17:12.360 -08 000000053 INF: ===================Camera #0 Frame #104===================
17-02-28 20:17:12.382 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:17:12.382 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:17:12.382 -08 000000050 INF: ===================Camera #2 Frame #105===================
17-02-28 20:17:12.441 -08 000000037 INF: Y Motor: Unshifted Position: 4059353
17-02-28 20:17:12.491 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:12.530 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:17:12.530 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:17:12.530 -08 000000053 INF: ===================Camera #0 Frame #110===================
17-02-28 20:17:12.553 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:17:12.553 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:17:12.553 -08 000000050 INF: ===================Camera #2 Frame #111===================
17-02-28 20:17:12.615 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:12.700 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:17:12.700 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:17:12.700 -08 000000053 INF: ===================Camera #0 Frame #117===================
17-02-28 20:17:12.724 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:17:12.724 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:17:12.724 -08 000000050 INF: ===================Camera #2 Frame #118===================
17-02-28 20:17:12.755 -08 000000037 INF: Y Motor: Unshifted Position: 3857635
17-02-28 20:17:12.805 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:12.873 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:17:12.873 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:17:12.873 -08 000000053 INF: ===================Camera #0 Frame #123===================
17-02-28 20:17:12.898 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:17:12.898 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:17:12.898 -08 000000050 INF: ===================Camera #2 Frame #124===================
17-02-28 20:17:12.929 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.043 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:17:13.043 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:17:13.043 -08 000000053 INF: ===================Camera #0 Frame #129===================
17-02-28 20:17:13.065 -08 000000037 INF: Y Motor: Unshifted Position: 3653320
17-02-28 20:17:13.069 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:17:13.069 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:17:13.069 -08 000000050 INF: ===================Camera #2 Frame #130===================
17-02-28 20:17:13.115 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.213 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:17:13.213 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:17:13.213 -08 000000053 INF: ===================Camera #0 Frame #136===================
17-02-28 20:17:13.239 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.240 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:17:13.240 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:17:13.240 -08 000000050 INF: ===================Camera #2 Frame #137===================
17-02-28 20:17:13.379 -08 000000037 INF: Y Motor: Unshifted Position: 3451818
17-02-28 20:17:13.386 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:17:13.386 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:17:13.386 -08 000000053 INF: ===================Camera #0 Frame #142===================
17-02-28 20:17:13.414 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:17:13.414 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:17:13.414 -08 000000050 INF: ===================Camera #2 Frame #143===================
17-02-28 20:17:13.429 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.553 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.556 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:17:13.556 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:17:13.556 -08 000000053 INF: ===================Camera #0 Frame #148===================
17-02-28 20:17:13.585 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:17:13.585 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:17:13.585 -08 000000050 INF: ===================Camera #2 Frame #149===================
17-02-28 20:17:13.689 -08 000000037 INF: Y Motor: Unshifted Position: 3247718
17-02-28 20:17:13.726 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:17:13.726 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:17:13.726 -08 000000053 INF: ===================Camera #0 Frame #155===================
17-02-28 20:17:13.739 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.756 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:17:13.756 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:17:13.756 -08 000000050 INF: ===================Camera #2 Frame #156===================
17-02-28 20:17:13.863 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.899 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:17:13.899 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:17:13.899 -08 000000053 INF: ===================Camera #0 Frame #161===================
17-02-28 20:17:13.930 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:17:13.930 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:17:13.930 -08 000000050 INF: ===================Camera #2 Frame #162===================
17-02-28 20:17:14.003 -08 000000037 INF: Y Motor: Unshifted Position: 3046010
17-02-28 20:17:14.053 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:14.069 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:17:14.069 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:17:14.069 -08 000000053 INF: ===================Camera #0 Frame #167===================
17-02-28 20:17:14.101 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:17:14.101 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:17:14.101 -08 000000050 INF: ===================Camera #2 Frame #168===================
17-02-28 20:17:14.179 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:14.239 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:17:14.239 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:17:14.239 -08 000000053 INF: ===================Camera #0 Frame #173===================
17-02-28 20:17:14.272 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:17:14.272 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:17:14.272 -08 000000050 INF: ===================Camera #2 Frame #175===================
17-02-28 20:17:14.314 -08 000000037 INF: Y Motor: Unshifted Position: 2842348
17-02-28 20:17:14.364 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:14.409 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:17:14.409 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:17:14.409 -08 000000053 INF: ===================Camera #0 Frame #180===================
17-02-28 20:17:14.446 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:17:14.446 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:17:14.446 -08 000000050 INF: ===================Camera #2 Frame #181===================
17-02-28 20:17:14.489 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:14.582 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:17:14.582 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:17:14.582 -08 000000053 INF: ===================Camera #0 Frame #186===================
17-02-28 20:17:14.617 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:17:14.617 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:17:14.617 -08 000000050 INF: ===================Camera #2 Frame #187===================
17-02-28 20:17:14.625 -08 000000037 INF: Y Motor: Unshifted Position: 2638894
17-02-28 20:17:14.675 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:14.752 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:17:14.752 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:17:14.752 -08 000000053 INF: ===================Camera #0 Frame #192===================
17-02-28 20:17:14.788 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:17:14.788 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:17:14.788 -08 000000050 INF: ===================Camera #2 Frame #194===================
17-02-28 20:17:14.799 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:14.922 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:17:14.922 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:17:14.922 -08 000000053 INF: ===================Camera #0 Frame #199===================
17-02-28 20:17:14.939 -08 000000037 INF: Y Motor: Unshifted Position: 2437188
17-02-28 20:17:14.962 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:17:14.962 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:17:14.962 -08 000000050 INF: ===================Camera #2 Frame #200===================
17-02-28 20:17:14.989 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.094 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:17:15.094 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:17:15.094 -08 000000053 INF: ===================Camera #0 Frame #205===================
17-02-28 20:17:15.110 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.133 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:17:15.133 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:17:15.133 -08 000000050 INF: ===================Camera #2 Frame #206===================
17-02-28 20:17:15.249 -08 000000037 INF: Y Motor: Unshifted Position: 2233087
17-02-28 20:17:15.264 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:17:15.264 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:17:15.264 -08 000000053 INF: ===================Camera #0 Frame #211===================
17-02-28 20:17:15.299 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.304 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:17:15.304 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:17:15.304 -08 000000050 INF: ===================Camera #2 Frame #213===================
17-02-28 20:17:15.426 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.434 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:17:15.434 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:17:15.434 -08 000000053 INF: ===================Camera #0 Frame #217===================
17-02-28 20:17:15.478 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:17:15.478 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:17:15.478 -08 000000050 INF: ===================Camera #2 Frame #219===================
17-02-28 20:17:15.560 -08 000000037 INF: Y Motor: Unshifted Position: 2030715
17-02-28 20:17:15.604 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:17:15.604 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:17:15.604 -08 000000053 INF: ===================Camera #0 Frame #224===================
17-02-28 20:17:15.610 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.649 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:17:15.649 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:17:15.649 -08 000000050 INF: ===================Camera #2 Frame #225===================
17-02-28 20:17:15.734 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.775 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:17:15.775 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:17:15.775 -08 000000053 INF: ===================Camera #0 Frame #230===================
17-02-28 20:17:15.820 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:17:15.820 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:17:15.820 -08 000000050 INF: ===================Camera #2 Frame #232===================
17-02-28 20:17:15.873 -08 000000037 INF: Y Motor: Unshifted Position: 1827264
17-02-28 20:17:15.923 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.943 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:17:15.943 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:17:15.943 -08 000000053 INF: ===================Camera #0 Frame #236===================
17-02-28 20:17:15.994 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:17:15.994 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:17:15.994 -08 000000050 INF: ===================Camera #2 Frame #238===================
17-02-28 20:17:16.047 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.113 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:17:16.113 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:17:16.113 -08 000000053 INF: ===================Camera #0 Frame #242===================
17-02-28 20:17:16.165 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:17:16.165 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:17:16.165 -08 000000050 INF: ===================Camera #2 Frame #244===================
17-02-28 20:17:16.187 -08 000000037 INF: Y Motor: Unshifted Position: 1625765
17-02-28 20:17:16.237 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.284 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:17:16.284 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:17:16.284 -08 000000053 INF: ===================Camera #0 Frame #249===================
17-02-28 20:17:16.337 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:17:16.337 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:17:16.337 -08 000000050 INF: ===================Camera #2 Frame #251===================
17-02-28 20:17:16.359 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.457 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:17:16.457 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:17:16.457 -08 000000053 INF: ===================Camera #0 Frame #255===================
17-02-28 20:17:16.499 -08 000000037 INF: Y Motor: Unshifted Position: 1421446
17-02-28 20:17:16.511 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:17:16.511 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:17:16.511 -08 000000050 INF: ===================Camera #2 Frame #257===================
17-02-28 20:17:16.549 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.627 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:17:16.627 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:17:16.627 -08 000000053 INF: ===================Camera #0 Frame #261===================
17-02-28 20:17:16.672 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.682 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:17:16.682 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:17:16.682 -08 000000050 INF: ===================Camera #2 Frame #263===================
17-02-28 20:17:16.797 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:17:16.797 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:17:16.797 -08 000000053 INF: ===================Camera #0 Frame #268===================
17-02-28 20:17:16.812 -08 000000037 INF: Y Motor: Unshifted Position: 1219722
17-02-28 20:17:16.853 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:17:16.853 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:17:16.853 -08 000000050 INF: ===================Camera #2 Frame #270===================
17-02-28 20:17:16.862 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.931 -08 000000030 INF: FPGA: Recv TDIYWAIT
17-02-28 20:17:16.932 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:16.933 -08 000000047 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:17:16.934 -08 000000064 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:17:16.934 -08 000000089 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:17:16.934 -08 000000064 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:17:16.934 -08 000000064 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:17:16.934 -08 000000064 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:17:16.934 -08 000000089 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:17:16.934 -08 000000089 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:17:16.934 -08 000000089 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:17:16.934 -08 000000064 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:17:16.935 -08 000000089 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:17:16.969 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:17:16.969 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:17:16.969 -08 000000053 INF: ===================Camera #0 Frame #272===================
17-02-28 20:17:16.982 -08 000000053 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:17:16.983 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.983 -08 000000053 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:17.122 -08 000000037 INF: Y Motor: Unshifted Position: 1014981
17-02-28 20:17:17.145 -08 000000053 INF: Camera #0 ReleaseBuffer
17-02-28 20:17:17.145 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:17:17.145 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:17:17.145 -08 000000050 INF: ===================Camera #2 Frame #272===================
17-02-28 20:17:17.145 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:17:17.151 -08 000000050 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:17:17.152 -08 000000050 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:17.172 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:17.178 -08 000000053 INF: ======================================
17-02-28 20:17:17.308 -08 000000051 INF: FPGA: Recv EX1MV
17-02-28 20:17:17.308 -08 000000051 INF: FPGA: Recv EX2MV
17-02-28 20:17:17.308 -08 000000064 INF: Excitation Filter 1: Moved 107 steps in 374.0774 ms
17-02-28 20:17:17.308 -08 000000089 INF: Excitation Filter 2: Moved 107 steps in 373.9744 ms
17-02-28 20:17:17.308 -08 000000064 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 374.1808 ms
17-02-28 20:17:17.308 -08 000000064 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 374.323 ms
17-02-28 20:17:17.308 -08 000000089 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 374.1105 ms
17-02-28 20:17:17.308 -08 000000089 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 374.2861 ms
17-02-28 20:17:17.309 -08 000000064 INF: ======================================
17-02-28 20:17:17.309 -08 000000089 INF: ======================================
17-02-28 20:17:17.310 -08 000000037 INF: Y Motor: Unshifted Position: 982453
17-02-28 20:17:17.310 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:17.310 -08 000000037 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:17.310 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:17.311 -08 000000047 INF: ======================================
17-02-28 20:17:17.348 -08 000000050 INF: Camera #2 ReleaseBuffer
17-02-28 20:17:17.348 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:17:17.372 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:17:17.372 -08 000000037 INF: Y Motor: Moved to 14.8245 after 7863 ms
17-02-28 20:17:17.372 -08 000000037 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:17.382 -08 000000050 INF: ======================================
17-02-28 20:17:17.383 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:17:17.385 -08 000000105 INF: ======================================
17-02-28 20:17:17.434 -08 000000037 INF: Y Motor: Recv v 4097\r
17-02-28 20:17:17.434 -08 000000037 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:17.434 -08 000000037 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:17.496 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:17:17.496 -08 000000037 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:17.496 -08 000000037 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:17.558 -08 000000037 INF: Y Motor: Recv v 134217728\r
17-02-28 20:17:17.558 -08 000000037 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:17:17.558 -08 000000037 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:17.558 -08 000000037 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:17.620 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:17:17.620 -08 000000037 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:17.620 -08 000000037 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:17.620 -08 000000037 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:17.684 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:17:17.684 -08 000000037 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:17.684 -08 000000037 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:17.748 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:17:17.748 -08 000000037 INF: ======================================
17-02-28 20:17:17.749 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:17.750 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:17.751 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:17.751 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:17:17.807 -08 000000101 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:17:17.807 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:17.867 -08 000000098 INF: FPGA: Recv TDIYERD 1482453
17-02-28 20:17:17.867 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:17:17.932 -08 000000089 INF: FPGA: Recv ZADCR 16071
17-02-28 20:17:17.932 -08 000000018 INF: At scan end Y pos = 14.825 and Z pos = -0.062. Y moved -48.539 mm
17-02-28 20:17:17.932 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:17:17.994 -08 000000038 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:17:17.994 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:17:17.994 -08 000000018 INF: TDIScan finished after 11829.9182 ms
17-02-28 20:17:17.994 -08 000000018 INF: Image[0]: Y should trigger at 63.364 mm, 2nd row was at 64.273 mm (error = 0.909 mm)
17-02-28 20:17:17.994 -08 000000018 INF: Image[2]: Y should trigger at 63.364 mm, 2nd row was at 64.273 mm (error = 0.909 mm)
17-02-28 20:17:17.996 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.028 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.848 um
17-02-28 20:17:18.028 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.029 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:17:18.056 -08 000000101 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:17:18.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.057 -08 000000047 INF: ===================Dither Clean Up Command===================
17-02-28 20:17:18.057 -08 000000037 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:17:18.057 -08 000000105 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:17:18.057 -08 000000104 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:17:18.057 -08 000000105 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:17:18.057 -08 000000105 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:17:18.057 -08 000000037 INF: ======================================
17-02-28 20:17:18.058 -08 000000104 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:17:18.058 -08 000000104 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:17:18.058 -08 000000053 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:17:18.058 -08 000000059 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:18.059 -08 000000053 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:17:18.061 -08 000000059 INF: ===================LFT:Extracting coords===================
17-02-28 20:17:18.086 -08 000000059 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:18.086 -08 000000059 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:17:18.087 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.087 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.087 -08 000000010 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.087 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.088 -08 000000046 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:18.088 -08 000000098 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:18.088 -08 000000038 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:18.088 -08 000000010 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:18.118 -08 000000108 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:18.118 -08 000000108 INF: FPGA: Recv ZSEL 
17-02-28 20:17:18.118 -08 000000053 INF: FPGA: Xmit ZDACW 18531\n
17-02-28 20:17:18.118 -08 000000104 INF: ======================================
17-02-28 20:17:18.120 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:17:18.120 -08 000000105 INF: ======================================
17-02-28 20:17:18.164 -08 000000046 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:18.164 -08 000000038 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:18.164 -08 000000098 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:18.164 -08 000000010 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:18.180 -08 000000057 INF: FPGA: Recv ZDACW 
17-02-28 20:17:18.180 -08 000000053 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:17:18.181 -08 000000053 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:17:18.242 -08 000000045 INF: FPGA: Recv TDIBB
17-02-28 20:17:18.242 -08 000000053 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:17:18.243 -08 000000053 INF: ======================================
17-02-28 20:17:18.316 -08 000000046 INF: LFT found best fwhm score 2.000174 in 152 ms
17-02-28 20:17:18.316 -08 000000046 INF: LFT found good score at index 1545 with fwhm value 2.000174. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:1,B
17-02-28 20:17:18.316 -08 000000038 INF: LFT found best fwhm score 2.000003 in 152 ms
17-02-28 20:17:18.316 -08 000000038 INF: LFT found good score at index 3725 with fwhm value 2.000003. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:1,B
17-02-28 20:17:18.316 -08 000000098 INF: LFT found best fwhm score 2.000294 in 152 ms
17-02-28 20:17:18.316 -08 000000098 INF: LFT found good score at index 5685 with fwhm value 2.000294. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:1,B
17-02-28 20:17:18.316 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.317 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.317 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.317 -08 000000046 INF: ======================================
17-02-28 20:17:18.317 -08 000000010 INF: LFT found best fwhm score 2.000085 in 153 ms
17-02-28 20:17:18.317 -08 000000038 INF: ======================================
17-02-28 20:17:18.317 -08 000000010 INF: LFT found good score at index 265 with fwhm value 2.000085. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:1,B
17-02-28 20:17:18.317 -08 000000098 INF: ======================================
17-02-28 20:17:18.317 -08 000000010 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.317 -08 000000010 INF: ======================================
17-02-28 20:17:18.318 -08 000000059 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:18.319 -08 000000059 INF: LFT weighted average best Z for bottom surface is at -0.049mm FC:A, C:3,L:1,B
17-02-28 20:17:18.319 -08 000000059 INF: ======================================
17-02-28 20:17:18.320 -08 000000047 INF: ======================================
17-02-28 20:17:18.321 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.322 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:17:18.322 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.322 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:17:18.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:17:18.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:17:18.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494===================
17-02-28 20:17:18.324 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494===================
17-02-28 20:17:18.324 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:17:18.324 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494===================
17-02-28 20:17:18.325 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:17:18.325 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:17:18.347 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:17:18.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:18.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494===================
17-02-28 20:17:18.348 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:18.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494===================
17-02-28 20:17:18.348 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:17:18.349 -08 000000018 INF: Transformed XStagePosition from 6.675336 mm to 6.69707136042416 mm.
17-02-28 20:17:18.390 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":1,"Tile":2105,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF188","HCSMMF219","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.399 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4732107402533 mm.
17-02-28 20:17:18.399 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2732107402533 mm.
17-02-28 20:17:18.399 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3639607402533 mm.
17-02-28 20:17:18.403 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.403 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:17:18.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.404 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -70.7 um, section = A_1
17-02-28 20:17:18.407 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:18.408 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:18.465 -08 000000087 INF: ===================MoveEmissionFilters===================
17-02-28 20:17:18.472 -08 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:18.472 -08 000000075 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:18.472 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:18.472 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:18.473 -08 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:18.473 -08 000000075 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:18.473 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:18.474 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:18.478 -08 000000078 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:17:18.478 -08 000000078 INF: ======================================
17-02-28 20:17:18.481 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":1,"Tile":2106,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF281","HCSMMF244","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.481 -08 000000081 INF: ===================Move X,Y===================
17-02-28 20:17:18.482 -08 000000030 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:17:18.483 -08 000000081 INF: ===================Move X,Y, Parallel===================
17-02-28 20:17:18.483 -08 000000030 INF: ======================================
17-02-28 20:17:18.483 -08 000000066 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:17:18.484 -08 000000066 INF: ======================================
17-02-28 20:17:18.486 -08 000000078 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:17:18.486 -08 000000030 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:17:18.487 -08 000000066 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:17:18.487 -08 000000066 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:17:18.487 -08 000000030 INF: ======================================
17-02-28 20:17:18.487 -08 000000078 INF: ======================================
17-02-28 20:17:18.487 -08 000000066 INF: ======================================
17-02-28 20:17:18.489 -08 000000075 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:18.489 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:18.490 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:17:18.490 -08 000000066 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:17:18.490 -08 000000030 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:17:18.490 -08 000000075 INF: ======================================
17-02-28 20:17:18.490 -08 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:18.490 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:18.490 -08 000000066 INF: ======================================
17-02-28 20:17:18.490 -08 000000078 INF: ===================Move X Motor without settling===================
17-02-28 20:17:18.491 -08 000000078 INF: X Motor: Xmit PR VM\n
17-02-28 20:17:18.492 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:17:18.492 -08 000000075 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:17:18.492 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:18.492 -08 000000075 INF: ======================================
17-02-28 20:17:18.493 -08 000000090 INF: ======================================
17-02-28 20:17:18.493 -08 000000047 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:18.493 -08 000000047 INF: Y Motor: Moving to 64.4732 mm @25.000 mm/sec, started at 14.8245 mm
17-02-28 20:17:18.493 -08 000000047 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:18.494 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:18.494 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:18.494 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:17:18.495 -08 000000045 INF: ======================================
17-02-28 20:17:18.495 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:18.495 -08 000000025 INF: ======================================
17-02-28 20:17:18.495 -08 000000101 INF: ===================Camera Arm TDI===================
17-02-28 20:17:18.495 -08 000000075 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:18.496 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:18.496 -08 000000075 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:17:18.496 -08 000000087 INF: ======================================
17-02-28 20:17:18.497 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:18.499 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:18.528 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":1,"Tile":2110,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF194","HCSMMF269","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.532 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":1,"Tile":2101,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF259","HCSMMF277","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.534 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":1,"Tile":2102,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF241","HCSMMF204","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.535 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":1,"Tile":2107,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF207","HCSMMF245","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.536 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":1,"Tile":2111,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF202","HCSMMF211","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.538 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":1,"Tile":2103,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF203","HCSMMF185","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.539 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":1,"Tile":2109,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF263","HCSMMF181","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.541 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":1,"Tile":2104,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF247","HCSMMF249","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.543 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":1,"Tile":2108,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF206","HCSMMF218","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.544 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":1,"Tile":2115,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF216","HCSMMF266","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.545 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":1,"Tile":2117,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF183","HCSMMF192","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.547 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":1,"Tile":2112,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF276","HCSMMF180","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.548 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":1,"Tile":2113,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF236","HCSMMF186","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.552 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":1,"Tile":2120,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF189","HCSMMF231","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.570 -08 000000060 INF: FPGA: Recv ZSEL 
17-02-28 20:17:18.571 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:18.572 -08 000000078 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:17:18.572 -08 000000078 INF: X Motor: Xmit PR VI\n
17-02-28 20:17:18.572 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:17:18.572 -08 000000047 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:18.572 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:18.572 -08 000000075 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:17:18.586 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":1,"Tile":2114,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF248","HCSMMF286","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.587 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":1,"Tile":2116,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF254","HCSMMF209","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.588 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":1,"Tile":2119,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF280","HCSMMF268","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.590 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":1,"Tile":2121,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF201","HCSMMF264","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.590 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":1,"Tile":2118,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF258","HCSMMF178","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.591 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":1,"Tile":2122,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF226","HCSMMF279","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.592 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":1,"Tile":2123,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF212","HCSMMF260","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.593 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":1,"Tile":2127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF253","HCSMMF197","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.594 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":1,"Tile":2125,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF284","HCSMMF177","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.596 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":1,"Tile":2128,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF213","HCSMMF191","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.597 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":1,"Tile":2124,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF283","HCSMMF221","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.599 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":1,"Tile":2126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF215","HCSMMF255","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.619 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:18.625 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:17:18.632 -08 000000090 INF: FPGA: Recv TDIBB
17-02-28 20:17:18.632 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:18.633 -08 000000075 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:18.634 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:17:18.634 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:18.634 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:18.635 -08 000000078 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:17:18.635 -08 000000078 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:17:18.635 -08 000000078 INF: X Motor: Moving to 6.6971 mm @15.000 mm/sec, started at 5.6016 mm
17-02-28 20:17:18.635 -08 000000078 INF: X Motor: Xmit MA -21423\n
17-02-28 20:17:18.635 -08 000000075 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:17:18.636 -08 000000075 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:17:18.636 -08 000000075 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:17:18.694 -08 000000082 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:18.694 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:18.696 -08 000000078 INF: X Motor: Recv MA -21423\r\n>
17-02-28 20:17:18.696 -08 000000078 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:17:18.696 -08 000000075 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:17:18.696 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:18.697 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:17:18.697 -08 000000047 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:18.697 -08 000000047 INF: Y Motor: Set target position to 5947321 encoder counts
17-02-28 20:17:18.697 -08 000000047 INF: Y Motor: Xmit s r0xca 5947321\r
17-02-28 20:17:18.698 -08 000000075 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:17:18.698 -08 000000075 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:17:18.698 -08 000000075 INF: Z Motor: Arming to move to -0.0307 mm
17-02-28 20:17:18.698 -08 000000075 INF: FPGA: Xmit ZYT 6427321 4\n
17-02-28 20:17:18.706 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:18.706 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:17:18.743 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:18.749 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:17:18.756 -08 000000086 INF: FPGA: Recv ZYT 
17-02-28 20:17:18.756 -08 000000075 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1482453 enc / 14.825 mm / ) = 6427321 enc / 64.273 mm
17-02-28 20:17:18.756 -08 000000075 INF: FPGA: Xmit ZARM 8045\n
17-02-28 20:17:18.758 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:17:18.758 -08 000000047 INF: Y Motor: Start the move command
17-02-28 20:17:18.758 -08 000000047 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:18.821 -08 000000087 INF: FPGA: Recv ZARM
17-02-28 20:17:18.821 -08 000000075 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.9008 ms
17-02-28 20:17:18.821 -08 000000075 INF: Z Motor: ArmAbsStepped took 122.62 ms
17-02-28 20:17:18.821 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:18.823 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:17:18.823 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:17:18.823 -08 000000047 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:17:18.823 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:18.824 -08 000000075 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:17:18.825 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:17:18.826 -08 000000075 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:17:18.827 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:17:18.828 -08 000000075 INF: ======================================
17-02-28 20:17:18.839 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:18.845 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:17:18.943 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:18.947 -08 000000047 INF: Y Motor: Unshifted Position: 1069096
17-02-28 20:17:18.949 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:17:18.997 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:19.061 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:19.102 -08 000000101 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:19.102 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:19.102 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:19.117 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:19.119 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:19.122 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:19.260 -08 000000047 INF: Y Motor: Unshifted Position: 1772457
17-02-28 20:17:19.310 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:19.321 -08 000000078 INF: X Motor: Xmit PR ER\n
17-02-28 20:17:19.344 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:17:19.385 -08 000000078 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:17:19.385 -08 000000078 INF: X Motor: Moved to 6.6978 after 689 ms
17-02-28 20:17:19.385 -08 000000078 INF: ======================================
17-02-28 20:17:19.433 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:19.572 -08 000000047 INF: Y Motor: Unshifted Position: 2552470
17-02-28 20:17:19.622 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:19.715 -08 000000101 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:19.715 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:19.716 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:19.730 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:19.732 -08 000000101 INF: ===================Camera Arm TDI===================
17-02-28 20:17:19.733 -08 000000101 INF: ======================================
17-02-28 20:17:19.734 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:19.735 -08 000000030 INF: ======================================
17-02-28 20:17:19.746 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:19.884 -08 000000047 INF: Y Motor: Unshifted Position: 3335744
17-02-28 20:17:19.934 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.057 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.195 -08 000000047 INF: Y Motor: Unshifted Position: 4118330
17-02-28 20:17:20.245 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.369 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.511 -08 000000047 INF: Y Motor: Unshifted Position: 4894089
17-02-28 20:17:20.561 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.682 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.818 -08 000000047 INF: Y Motor: Unshifted Position: 5675004
17-02-28 20:17:20.868 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.992 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:21.133 -08 000000047 INF: Y Motor: Unshifted Position: 5947322
17-02-28 20:17:21.133 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:21.133 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:21.193 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:17:21.193 -08 000000047 INF: Y Motor: Moved to 64.4732 after 2370 ms
17-02-28 20:17:21.193 -08 000000047 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:21.255 -08 000000047 INF: Y Motor: Recv v 4096\r
17-02-28 20:17:21.255 -08 000000047 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:21.255 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:21.318 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:17:21.318 -08 000000047 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:21.318 -08 000000047 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:21.381 -08 000000047 INF: Y Motor: Recv v 402653184\r
17-02-28 20:17:21.381 -08 000000047 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:17:21.381 -08 000000047 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:21.381 -08 000000047 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:21.444 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:17:21.444 -08 000000047 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:21.444 -08 000000047 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:21.444 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:21.506 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:17:21.506 -08 000000047 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:21.506 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:21.568 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:17:21.568 -08 000000047 INF: ======================================
17-02-28 20:17:21.569 -08 000000081 INF: ===================Move X,Y===================
17-02-28 20:17:21.570 -08 000000081 INF: ======================================
17-02-28 20:17:21.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:21.572 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:21.572 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:17:21.572 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:17:21.630 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:21.630 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:17:21.690 -08 000000081 INF: FPGA: Recv ZFREQCL
17-02-28 20:17:21.691 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:17:21.691 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:21.691 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:21.752 -08 000000051 INF: FPGA: Recv TDIYERD 6447323
17-02-28 20:17:21.752 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447323 counts (64.473 mm)
17-02-28 20:17:21.752 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:21.753 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:21.754 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:21.754 -08 000000033 INF: ===================Set YMotor gains for scans===================
17-02-28 20:17:21.754 -08 000000033 INF: ======================================
17-02-28 20:17:21.754 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:21.755 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:17:21.755 -08 000000053 INF: FPGA: Xmit TDIYPOS 6336396\n
17-02-28 20:17:21.814 -08 000000064 INF: FPGA: Recv TDIYPOS
17-02-28 20:17:21.814 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:21.816 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:17:21.816 -08 000000053 INF: FPGA: Xmit TDIYARM3 139264 6427321 1 1\n
17-02-28 20:17:21.876 -08 000000101 INF: FPGA: Recv TDIYARM3
17-02-28 20:17:21.876 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:21.878 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:21.879 -08 000000053 INF: ======================================
17-02-28 20:17:21.880 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:21.880 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:21.881 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:21.881 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:21.882 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:21.882 -08 000000082 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:17:21.883 -08 000000082 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:17:21.883 -08 000000082 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:17:21.883 -08 000000082 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:17:21.883 -08 000000078 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:17:21.883 -08 000000082 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:17:21.883 -08 000000078 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:17:21.883 -08 000000078 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:17:21.883 -08 000000078 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:17:21.884 -08 000000078 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:17:22.251 -08 000000060 INF: FPGA: Recv EX2MV
17-02-28 20:17:22.251 -08 000000082 INF: Excitation Filter 2: Moved -107 steps in 368.2524 ms
17-02-28 20:17:22.251 -08 000000082 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.4642 ms
17-02-28 20:17:22.251 -08 000000082 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.5662 ms
17-02-28 20:17:22.252 -08 000000082 INF: ======================================
17-02-28 20:17:22.313 -08 000000072 INF: FPGA: Recv EX1MV
17-02-28 20:17:22.313 -08 000000078 INF: Excitation Filter 1: Moved -107 steps in 429.9679 ms
17-02-28 20:17:22.313 -08 000000078 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 430.1199 ms
17-02-28 20:17:22.313 -08 000000078 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 430.1971 ms
17-02-28 20:17:22.313 -08 000000078 INF: ======================================
17-02-28 20:17:22.315 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:22.316 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:22.317 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:17:22.317 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:22.317 -08 000000077 INF: ===================FPGA Z Wait===================
17-02-28 20:17:22.317 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:22.317 -08 000000077 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:17:22.317 -08 000000058 INF: Y Motor: Moving to 14.8249 mm @6.500 mm/sec, started at 64.4732 mm
17-02-28 20:17:22.317 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:22.317 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:22.317 -08 000000087 INF: ===================Camera TDI, Parallel===================
17-02-28 20:17:22.317 -08 000000045 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:17:22.318 -08 000000060 INF: ===================Camera TDI===================
17-02-28 20:17:22.318 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:17:22.319 -08 000000045 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:17:22.320 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:22.320 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:22.321 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:22.321 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:22.380 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:17:22.380 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:22.380 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:22.442 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:17:22.442 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:22.470 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:22.470 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:22.471 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:22.471 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:22.504 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:17:22.504 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:22.504 -08 000000058 INF: Y Motor: Set target position to 982487 encoder counts
17-02-28 20:17:22.504 -08 000000058 INF: Y Motor: Xmit s r0xca 982487\r
17-02-28 20:17:22.566 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:17:22.566 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:17:22.566 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:22.620 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:22.620 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:22.621 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:22.621 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:22.630 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:17:22.630 -08 000000058 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:17:22.630 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:22.688 -08 000000064 INF: FPGA: Recv ZWAIT 
17-02-28 20:17:22.688 -08 000000077 INF: ======================================
17-02-28 20:17:22.752 -08 000000058 INF: Y Motor: Unshifted Position: 5885464
17-02-28 20:17:22.770 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:17:22.770 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:17:22.770 -08 000000025 INF: ===================Camera #2 Frame #4===================
17-02-28 20:17:22.771 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:22.771 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:22.771 -08 000000060 INF: ===================Camera #0 Frame #5===================
17-02-28 20:17:22.802 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:22.929 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:22.940 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:22.940 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:22.940 -08 000000025 INF: ===================Camera #2 Frame #11===================
17-02-28 20:17:22.943 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:22.943 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:22.943 -08 000000060 INF: ===================Camera #0 Frame #11===================
17-02-28 20:17:23.065 -08 000000058 INF: Y Motor: Unshifted Position: 5682018
17-02-28 20:17:23.111 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:23.111 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:23.111 -08 000000060 INF: ===================Camera #0 Frame #17===================
17-02-28 20:17:23.115 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:23.123 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:23.123 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:23.123 -08 000000025 INF: ===================Camera #2 Frame #17===================
17-02-28 20:17:23.239 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:23.283 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:17:23.283 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:17:23.283 -08 000000060 INF: ===================Camera #0 Frame #23===================
17-02-28 20:17:23.301 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:17:23.301 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:17:23.301 -08 000000025 INF: ===================Camera #2 Frame #24===================
17-02-28 20:17:23.376 -08 000000058 INF: Y Motor: Unshifted Position: 5480311
17-02-28 20:17:23.426 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:23.457 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:17:23.457 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:17:23.457 -08 000000060 INF: ===================Camera #0 Frame #30===================
17-02-28 20:17:23.473 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:17:23.473 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:17:23.473 -08 000000025 INF: ===================Camera #2 Frame #30===================
17-02-28 20:17:23.553 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:23.629 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:17:23.629 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:17:23.629 -08 000000060 INF: ===================Camera #0 Frame #36===================
17-02-28 20:17:23.652 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:17:23.652 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:17:23.652 -08 000000025 INF: ===================Camera #2 Frame #37===================
17-02-28 20:17:23.689 -08 000000058 INF: Y Motor: Unshifted Position: 5276204
17-02-28 20:17:23.739 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:23.797 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:17:23.797 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:17:23.797 -08 000000060 INF: ===================Camera #0 Frame #42===================
17-02-28 20:17:23.824 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:17:23.824 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:17:23.824 -08 000000025 INF: ===================Camera #2 Frame #43===================
17-02-28 20:17:23.863 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:23.973 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:17:23.973 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:17:23.973 -08 000000060 INF: ===================Camera #0 Frame #49===================
17-02-28 20:17:23.993 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:17:23.993 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:17:23.993 -08 000000025 INF: ===================Camera #2 Frame #50===================
17-02-28 20:17:24.002 -08 000000058 INF: Y Motor: Unshifted Position: 5074701
17-02-28 20:17:24.052 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:24.150 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:17:24.150 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:17:24.150 -08 000000060 INF: ===================Camera #0 Frame #55===================
17-02-28 20:17:24.171 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:17:24.171 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:17:24.171 -08 000000025 INF: ===================Camera #2 Frame #56===================
17-02-28 20:17:24.176 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:24.312 -08 000000058 INF: Y Motor: Unshifted Position: 4871039
17-02-28 20:17:24.328 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:17:24.328 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:17:24.328 -08 000000060 INF: ===================Camera #0 Frame #62===================
17-02-28 20:17:24.349 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:17:24.349 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:17:24.349 -08 000000025 INF: ===================Camera #2 Frame #63===================
17-02-28 20:17:24.362 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:24.489 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:24.510 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:17:24.510 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:17:24.510 -08 000000060 INF: ===================Camera #0 Frame #69===================
17-02-28 20:17:24.532 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:17:24.532 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:17:24.532 -08 000000025 INF: ===================Camera #2 Frame #69===================
17-02-28 20:17:24.625 -08 000000058 INF: Y Motor: Unshifted Position: 4667586
17-02-28 20:17:24.675 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:24.682 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:17:24.682 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:17:24.682 -08 000000060 INF: ===================Camera #0 Frame #75===================
17-02-28 20:17:24.703 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:17:24.703 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:17:24.703 -08 000000025 INF: ===================Camera #2 Frame #76===================
17-02-28 20:17:24.799 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:24.850 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:17:24.850 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:17:24.850 -08 000000060 INF: ===================Camera #0 Frame #81===================
17-02-28 20:17:24.876 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:17:24.876 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:17:24.877 -08 000000025 INF: ===================Camera #2 Frame #82===================
17-02-28 20:17:24.938 -08 000000058 INF: Y Motor: Unshifted Position: 4465856
17-02-28 20:17:24.988 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:25.019 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:17:25.019 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:17:25.019 -08 000000060 INF: ===================Camera #0 Frame #87===================
17-02-28 20:17:25.050 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:17:25.050 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:17:25.050 -08 000000025 INF: ===================Camera #2 Frame #88===================
17-02-28 20:17:25.112 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:25.188 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:17:25.188 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:17:25.188 -08 000000060 INF: ===================Camera #0 Frame #94===================
17-02-28 20:17:25.221 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:17:25.221 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:17:25.221 -08 000000025 INF: ===================Camera #2 Frame #95===================
17-02-28 20:17:25.248 -08 000000058 INF: Y Motor: Unshifted Position: 4262197
17-02-28 20:17:25.298 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:25.360 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:17:25.360 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:17:25.360 -08 000000060 INF: ===================Camera #0 Frame #100===================
17-02-28 20:17:25.394 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:17:25.394 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:17:25.394 -08 000000025 INF: ===================Camera #2 Frame #101===================
17-02-28 20:17:25.425 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:25.529 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:17:25.529 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:17:25.529 -08 000000060 INF: ===================Camera #0 Frame #106===================
17-02-28 20:17:25.562 -08 000000058 INF: Y Motor: Unshifted Position: 4059817
17-02-28 20:17:25.564 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:17:25.564 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:17:25.564 -08 000000025 INF: ===================Camera #2 Frame #107===================
17-02-28 20:17:25.612 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:25.698 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:17:25.698 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:17:25.698 -08 000000060 INF: ===================Camera #0 Frame #112===================
17-02-28 20:17:25.733 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:17:25.733 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:17:25.733 -08 000000025 INF: ===================Camera #2 Frame #114===================
17-02-28 20:17:25.736 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:25.868 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:17:25.868 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:17:25.868 -08 000000060 INF: ===================Camera #0 Frame #119===================
17-02-28 20:17:25.873 -08 000000058 INF: Y Motor: Unshifted Position: 3856374
17-02-28 20:17:25.907 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:17:25.907 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:17:25.907 -08 000000025 INF: ===================Camera #2 Frame #120===================
17-02-28 20:17:25.923 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.041 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:17:26.041 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:17:26.041 -08 000000060 INF: ===================Camera #0 Frame #125===================
17-02-28 20:17:26.049 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.076 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:17:26.076 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:17:26.076 -08 000000025 INF: ===================Camera #2 Frame #126===================
17-02-28 20:17:26.186 -08 000000058 INF: Y Motor: Unshifted Position: 3652922
17-02-28 20:17:26.212 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:17:26.212 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:17:26.212 -08 000000060 INF: ===================Camera #0 Frame #131===================
17-02-28 20:17:26.236 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.246 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:17:26.246 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:17:26.246 -08 000000025 INF: ===================Camera #2 Frame #132===================
17-02-28 20:17:26.360 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.383 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:17:26.383 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:17:26.383 -08 000000060 INF: ===================Camera #0 Frame #137===================
17-02-28 20:17:26.415 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:17:26.415 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:17:26.415 -08 000000025 INF: ===================Camera #2 Frame #139===================
17-02-28 20:17:26.499 -08 000000058 INF: Y Motor: Unshifted Position: 3451414
17-02-28 20:17:26.529 -08 000000036 INF: RunCopyService queue size at 2/28/2017 8:17:26 PM is 14
17-02-28 20:17:26.549 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.554 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:17:26.554 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:17:26.554 -08 000000060 INF: ===================Camera #0 Frame #144===================
17-02-28 20:17:26.587 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:17:26.587 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:17:26.587 -08 000000025 INF: ===================Camera #2 Frame #145===================
17-02-28 20:17:26.671 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.725 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:17:26.725 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:17:26.725 -08 000000060 INF: ===================Camera #0 Frame #150===================
17-02-28 20:17:26.756 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:17:26.756 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:17:26.756 -08 000000025 INF: ===================Camera #2 Frame #151===================
17-02-28 20:17:26.812 -08 000000058 INF: Y Motor: Unshifted Position: 3247108
17-02-28 20:17:26.862 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.893 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:17:26.893 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:17:26.893 -08 000000060 INF: ===================Camera #0 Frame #156===================
17-02-28 20:17:26.925 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:17:26.925 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:17:26.925 -08 000000025 INF: ===================Camera #2 Frame #157===================
17-02-28 20:17:26.984 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.061 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:17:27.061 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:17:27.061 -08 000000060 INF: ===================Camera #0 Frame #162===================
17-02-28 20:17:27.094 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:17:27.094 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:17:27.094 -08 000000025 INF: ===================Camera #2 Frame #164===================
17-02-28 20:17:27.123 -08 000000058 INF: Y Motor: Unshifted Position: 3045397
17-02-28 20:17:27.173 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.229 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:17:27.229 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:17:27.229 -08 000000060 INF: ===================Camera #0 Frame #169===================
17-02-28 20:17:27.266 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:17:27.266 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:17:27.266 -08 000000025 INF: ===================Camera #2 Frame #170===================
17-02-28 20:17:27.297 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.400 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:17:27.400 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:17:27.400 -08 000000060 INF: ===================Camera #0 Frame #175===================
17-02-28 20:17:27.434 -08 000000058 INF: Y Motor: Unshifted Position: 2841947
17-02-28 20:17:27.435 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:17:27.435 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:17:27.435 -08 000000025 INF: ===================Camera #2 Frame #176===================
17-02-28 20:17:27.484 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.568 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:17:27.568 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:17:27.568 -08 000000060 INF: ===================Camera #0 Frame #181===================
17-02-28 20:17:27.604 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:17:27.604 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:17:27.604 -08 000000025 INF: ===================Camera #2 Frame #182===================
17-02-28 20:17:27.608 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.736 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:17:27.736 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:17:27.736 -08 000000060 INF: ===================Camera #0 Frame #187===================
17-02-28 20:17:27.747 -08 000000058 INF: Y Motor: Unshifted Position: 2639576
17-02-28 20:17:27.773 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:17:27.773 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:17:27.773 -08 000000025 INF: ===================Camera #2 Frame #189===================
17-02-28 20:17:27.797 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.904 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:17:27.904 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:17:27.904 -08 000000060 INF: ===================Camera #0 Frame #193===================
17-02-28 20:17:27.921 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.945 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:17:27.945 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:17:27.945 -08 000000025 INF: ===================Camera #2 Frame #195===================
17-02-28 20:17:28.057 -08 000000058 INF: Y Motor: Unshifted Position: 2434619
17-02-28 20:17:28.074 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:17:28.074 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:17:28.074 -08 000000060 INF: ===================Camera #0 Frame #200===================
17-02-28 20:17:28.107 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:28.114 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:17:28.114 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:17:28.114 -08 000000025 INF: ===================Camera #2 Frame #201===================
17-02-28 20:17:28.231 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:28.248 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:17:28.248 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:17:28.248 -08 000000060 INF: ===================Camera #0 Frame #206===================
17-02-28 20:17:28.283 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:17:28.283 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:17:28.283 -08 000000025 INF: ===================Camera #2 Frame #207===================
17-02-28 20:17:28.370 -08 000000058 INF: Y Motor: Unshifted Position: 2232472
17-02-28 20:17:28.418 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:17:28.418 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:17:28.418 -08 000000060 INF: ===================Camera #0 Frame #212===================
17-02-28 20:17:28.420 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:28.452 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:17:28.452 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:17:28.452 -08 000000025 INF: ===================Camera #2 Frame #214===================
17-02-28 20:17:28.544 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:28.588 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:17:28.588 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:17:28.588 -08 000000060 INF: ===================Camera #0 Frame #219===================
17-02-28 20:17:28.624 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:17:28.624 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:17:28.624 -08 000000025 INF: ===================Camera #2 Frame #220===================
17-02-28 20:17:28.683 -08 000000058 INF: Y Motor: Unshifted Position: 2030964
17-02-28 20:17:28.733 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:28.762 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:17:28.762 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:17:28.762 -08 000000060 INF: ===================Camera #0 Frame #225===================
17-02-28 20:17:28.793 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:17:28.793 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:17:28.793 -08 000000025 INF: ===================Camera #2 Frame #226===================
17-02-28 20:17:28.857 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:28.932 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:17:28.932 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:17:28.932 -08 000000060 INF: ===================Camera #0 Frame #231===================
17-02-28 20:17:28.962 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:17:28.962 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:17:28.962 -08 000000025 INF: ===================Camera #2 Frame #232===================
17-02-28 20:17:28.993 -08 000000058 INF: Y Motor: Unshifted Position: 1827301
17-02-28 20:17:29.043 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.102 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:17:29.102 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:17:29.102 -08 000000060 INF: ===================Camera #0 Frame #238===================
17-02-28 20:17:29.131 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:17:29.131 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:17:29.131 -08 000000025 INF: ===================Camera #2 Frame #239===================
17-02-28 20:17:29.167 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.276 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:17:29.276 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:17:29.276 -08 000000060 INF: ===================Camera #0 Frame #244===================
17-02-28 20:17:29.303 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:17:29.303 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:17:29.303 -08 000000025 INF: ===================Camera #2 Frame #245===================
17-02-28 20:17:29.306 -08 000000058 INF: Y Motor: Unshifted Position: 1623627
17-02-28 20:17:29.356 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.447 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:17:29.447 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:17:29.447 -08 000000060 INF: ===================Camera #0 Frame #250===================
17-02-28 20:17:29.472 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:17:29.472 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:17:29.472 -08 000000025 INF: ===================Camera #2 Frame #251===================
17-02-28 20:17:29.480 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.617 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:17:29.617 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:17:29.617 -08 000000060 INF: ===================Camera #0 Frame #257===================
17-02-28 20:17:29.619 -08 000000058 INF: Y Motor: Unshifted Position: 1422132
17-02-28 20:17:29.641 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:17:29.641 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:17:29.641 -08 000000025 INF: ===================Camera #2 Frame #257===================
17-02-28 20:17:29.669 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.791 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:17:29.791 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:17:29.791 -08 000000060 INF: ===================Camera #0 Frame #263===================
17-02-28 20:17:29.793 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.812 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:17:29.812 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:17:29.812 -08 000000025 INF: ===================Camera #2 Frame #264===================
17-02-28 20:17:29.929 -08 000000058 INF: Y Motor: Unshifted Position: 1218457
17-02-28 20:17:29.961 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:17:29.961 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:17:29.961 -08 000000060 INF: ===================Camera #0 Frame #269===================
17-02-28 20:17:29.979 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.986 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:17:29.986 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:17:29.986 -08 000000025 INF: ===================Camera #2 Frame #270===================
17-02-28 20:17:30.051 -08 000000034 INF: FPGA: Recv TDIYWAIT
17-02-28 20:17:30.052 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:30.053 -08 000000045 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:17:30.054 -08 000000105 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:17:30.054 -08 000000077 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:17:30.054 -08 000000105 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:17:30.054 -08 000000105 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:17:30.054 -08 000000105 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:17:30.054 -08 000000077 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:17:30.054 -08 000000105 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:17:30.054 -08 000000077 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:17:30.054 -08 000000077 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:17:30.057 -08 000000077 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:17:30.103 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:30.131 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:17:30.131 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:17:30.131 -08 000000060 INF: ===================Camera #0 Frame #272===================
17-02-28 20:17:30.141 -08 000000060 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:17:30.142 -08 000000060 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:30.242 -08 000000058 INF: Y Motor: Unshifted Position: 1015010
17-02-28 20:17:30.274 -08 000000060 INF: Camera #0 ReleaseBuffer
17-02-28 20:17:30.274 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:17:30.274 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:17:30.274 -08 000000025 INF: ===================Camera #2 Frame #272===================
17-02-28 20:17:30.274 -08 000000060 INF: ===================Camera TDI===================
17-02-28 20:17:30.280 -08 000000025 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:17:30.281 -08 000000025 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:30.292 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:30.306 -08 000000060 INF: ======================================
17-02-28 20:17:30.426 -08 000000081 INF: FPGA: Recv EX2MV
17-02-28 20:17:30.426 -08 000000081 INF: FPGA: Recv EX1MV
17-02-28 20:17:30.426 -08 000000077 INF: Excitation Filter 1: Moved 107 steps in 371.5334 ms
17-02-28 20:17:30.426 -08 000000077 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.6717 ms
17-02-28 20:17:30.426 -08 000000077 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.7443 ms
17-02-28 20:17:30.426 -08 000000105 INF: Excitation Filter 2: Moved 107 steps in 371.7455 ms
17-02-28 20:17:30.426 -08 000000105 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.953 ms
17-02-28 20:17:30.426 -08 000000105 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.0238 ms
17-02-28 20:17:30.426 -08 000000077 INF: ======================================
17-02-28 20:17:30.426 -08 000000105 INF: ======================================
17-02-28 20:17:30.428 -08 000000058 INF: Y Motor: Unshifted Position: 982486
17-02-28 20:17:30.428 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:30.428 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:30.428 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:30.429 -08 000000045 INF: ======================================
17-02-28 20:17:30.446 -08 000000025 INF: Camera #2 ReleaseBuffer
17-02-28 20:17:30.446 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:17:30.480 -08 000000025 INF: ======================================
17-02-28 20:17:30.481 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:17:30.482 -08 000000087 INF: ======================================
17-02-28 20:17:30.490 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:17:30.490 -08 000000058 INF: Y Motor: Moved to 14.8249 after 7859 ms
17-02-28 20:17:30.490 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:30.552 -08 000000058 INF: Y Motor: Recv v 4097\r
17-02-28 20:17:30.552 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:30.552 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:30.618 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:17:30.618 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:30.618 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:30.678 -08 000000058 INF: Y Motor: Recv v 134217728\r
17-02-28 20:17:30.678 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:17:30.678 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:30.678 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:30.742 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:17:30.742 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:30.742 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:30.742 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:30.806 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:17:30.806 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:30.806 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:30.866 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:17:30.866 -08 000000058 INF: ======================================
17-02-28 20:17:30.867 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:30.868 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:30.869 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:30.869 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:17:30.926 -08 000000105 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:17:30.926 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:30.988 -08 000000064 INF: FPGA: Recv TDIYERD 1482488
17-02-28 20:17:30.988 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:17:31.051 -08 000000053 INF: FPGA: Recv ZADCR 15809
17-02-28 20:17:31.051 -08 000000018 INF: At scan end Y pos = 14.825 and Z pos = -0.061. Y moved -48.539 mm
17-02-28 20:17:31.051 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:17:31.112 -08 000000073 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:17:31.112 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:17:31.112 -08 000000018 INF: TDIScan finished after 12762.923 ms
17-02-28 20:17:31.112 -08 000000018 INF: Image[0]: Y should trigger at 63.364 mm, 2nd row was at 64.273 mm (error = 0.909 mm)
17-02-28 20:17:31.112 -08 000000018 INF: Image[2]: Y should trigger at 63.364 mm, 2nd row was at 64.273 mm (error = 0.909 mm)
17-02-28 20:17:31.114 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.148 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.973 um
17-02-28 20:17:31.148 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.149 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:17:31.175 -08 000000101 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:17:31.175 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.176 -08 000000058 INF: ===================Dither Clean Up Command===================
17-02-28 20:17:31.176 -08 000000052 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:17:31.176 -08 000000086 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:17:31.176 -08 000000035 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:17:31.176 -08 000000035 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:17:31.177 -08 000000052 INF: ======================================
17-02-28 20:17:31.177 -08 000000035 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:17:31.177 -08 000000086 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:17:31.177 -08 000000086 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:17:31.177 -08 000000038 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:17:31.177 -08 000000039 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:31.180 -08 000000039 INF: ===================LFT:Extracting coords===================
17-02-28 20:17:31.181 -08 000000038 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:17:31.204 -08 000000039 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:31.205 -08 000000039 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:17:31.206 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.206 -08 000000073 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.206 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.206 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.206 -08 000000050 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:31.206 -08 000000073 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:31.207 -08 000000108 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:31.207 -08 000000087 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:31.240 -08 000000089 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:31.240 -08 000000089 INF: FPGA: Recv ZSEL 
17-02-28 20:17:31.240 -08 000000038 INF: FPGA: Xmit ZDACW 18531\n
17-02-28 20:17:31.240 -08 000000035 INF: ======================================
17-02-28 20:17:31.242 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:17:31.242 -08 000000086 INF: ======================================
17-02-28 20:17:31.281 -08 000000050 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:31.281 -08 000000073 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:31.281 -08 000000108 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:31.282 -08 000000087 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:31.301 -08 000000051 INF: FPGA: Recv ZDACW 
17-02-28 20:17:31.302 -08 000000038 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:17:31.302 -08 000000038 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:17:31.364 -08 000000069 INF: FPGA: Recv TDIBB
17-02-28 20:17:31.364 -08 000000038 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:17:31.365 -08 000000038 INF: ======================================
17-02-28 20:17:31.432 -08 000000050 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:17:31.432 -08 000000073 INF: LFT found best fwhm score 2.000589 in 151 ms
17-02-28 20:17:31.432 -08 000000073 INF: LFT found good score at index 4069 with fwhm value 2.000589. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:1,B
17-02-28 20:17:31.432 -08 000000050 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0492494282318682 in the next cycle, cycle 4 FC:A, C:3,L:1,B
17-02-28 20:17:31.432 -08 000000108 INF: LFT found best fwhm score 2.000027 in 151 ms
17-02-28 20:17:31.432 -08 000000108 INF: LFT found good score at index 8429 with fwhm value 2.000027. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:1,B
17-02-28 20:17:31.432 -08 000000073 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.432 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.433 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.433 -08 000000073 INF: ======================================
17-02-28 20:17:31.433 -08 000000050 INF: ======================================
17-02-28 20:17:31.433 -08 000000108 INF: ======================================
17-02-28 20:17:31.434 -08 000000087 INF: LFT found best fwhm score 2.000244 in 152 ms
17-02-28 20:17:31.434 -08 000000087 INF: LFT found good score at index 3901 with fwhm value 2.000244. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:1,B
17-02-28 20:17:31.434 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.435 -08 000000087 INF: ======================================
17-02-28 20:17:31.436 -08 000000039 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:31.437 -08 000000039 INF: LFT weighted average best Z for bottom surface is at -0.048mm FC:A, C:3,L:1,B
17-02-28 20:17:31.437 -08 000000039 INF: ======================================
17-02-28 20:17:31.438 -08 000000058 INF: ======================================
17-02-28 20:17:31.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:17:31.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:17:31.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:17:31.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:17:31.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494===================
17-02-28 20:17:31.442 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494===================
17-02-28 20:17:31.442 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:17:31.442 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494===================
17-02-28 20:17:31.442 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:17:31.443 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:17:31.465 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:17:31.465 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:31.465 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:31.465 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:31.466 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:17:31.466 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:31.467 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:17:31.483 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:31.523 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":1,"Tile":2203,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF250","HCSMMF246","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.547 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:31.547 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:17:31.548 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:17:31.585 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":1,"Tile":2201,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF242","HCSMMF239","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.603 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":1,"Tile":2204,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF193","HCSMMF191","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.615 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":1,"Tile":2212,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF244","HCSMMF243","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.616 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:31.617 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:31.617 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:17:31.618 -08 000000018 INF: Lane 2, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:17:31.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:31.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:31.621 -08 000000050 INF: ===================Move Tilt Motor 1===================
17-02-28 20:17:31.622 -08 000000050 INF: Tilt Motor 1: Moving to 5.1786 mm, started at 5.1798 mm, delta = -0.0013 mm
17-02-28 20:17:31.622 -08 000000050 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:31.623 -08 000000064 INF: ===================Move Tilt Motor 2===================
17-02-28 20:17:31.624 -08 000000064 INF: Tilt Motor 2: Moving to 5.2431 mm, started at 5.2443 mm, delta = -0.0013 mm
17-02-28 20:17:31.624 -08 000000064 INF: FPGA: Xmit T2RD\n
17-02-28 20:17:31.624 -08 000000087 INF: ===================Move Tilt Motor 3===================
17-02-28 20:17:31.625 -08 000000087 INF: Tilt Motor 3: Moving to 5.2710 mm, started at 5.2695 mm, delta = 0.0015 mm
17-02-28 20:17:31.625 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:31.716 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":1,"Tile":2205,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF213","HCSMMF198","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.716 -08 000000030 INF: FPGA: Recv T1RD 20391
17-02-28 20:17:31.716 -08 000000030 INF: FPGA: Recv T2RD 20647
17-02-28 20:17:31.716 -08 000000030 INF: FPGA: Recv T3RD 20746
17-02-28 20:17:31.717 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3457 + 4/6
17-02-28 20:17:31.717 -08 000000087 INF: Tilt Motor 3: Moving to 20752 encoder counts
17-02-28 20:17:31.717 -08 000000064 INF: Tilt Motor 2: Encoder: at motor step 3441 + 1/6
17-02-28 20:17:31.717 -08 000000064 INF: Tilt Motor 2: Moving to 20642 encoder counts
17-02-28 20:17:31.717 -08 000000087 INF: FPGA: Xmit T3MOVETO 20752\n
17-02-28 20:17:31.718 -08 000000050 INF: Tilt Motor 1: Encoder: at motor step 3398 + 3/6
17-02-28 20:17:31.718 -08 000000064 INF: FPGA: Xmit T2MOVETO 20642\n
17-02-28 20:17:31.718 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":1,"Tile":2202,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF234","HCSMMF177","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.718 -08 000000050 INF: Tilt Motor 1: Moving to 20388 encoder counts
17-02-28 20:17:31.719 -08 000000050 INF: FPGA: Xmit T1MOVETO 20388\n
17-02-28 20:17:31.719 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":1,"Tile":2213,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF182","HCSMMF261","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.724 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":1,"Tile":2208,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF268","HCSMMF226","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.726 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":1,"Tile":2210,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF265","HCSMMF229","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.727 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":1,"Tile":2209,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF280","HCSMMF231","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.729 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":1,"Tile":2206,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF228","HCSMMF220","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.729 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":1,"Tile":2211,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF278","HCSMMF273","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.730 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":1,"Tile":2215,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF189","HCSMMF192","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.731 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":1,"Tile":2217,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF282","HCSMMF269","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.732 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":1,"Tile":2218,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF190","HCSMMF260","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.733 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":1,"Tile":2216,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF176","HCSMMF218","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.734 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":1,"Tile":2219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF194","HCSMMF233","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.735 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":1,"Tile":2223,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF285","HCSMMF208","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.736 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":1,"Tile":2221,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF204","HCSMMF236","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.737 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":1,"Tile":2207,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF181","HCSMMF203","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.738 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":1,"Tile":2220,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF230","HCSMMF258","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.739 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":1,"Tile":2214,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF287","HCSMMF281","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.741 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":1,"Tile":2222,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF186","HCSMMF274","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.744 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":1,"Tile":2224,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF275","HCSMMF257","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.744 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":1,"Tile":2226,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF184","HCSMMF277","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.747 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":1,"Tile":2225,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF187","HCSMMF188","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.748 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":1,"Tile":2227,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF259","HCSMMF214","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.756 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":1,"Tile":2228,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF201","HCSMMF237","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.759 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:31.765 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:17:31.831 -08 000000075 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:17:31.831 -08 000000075 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:17:31.831 -08 000000075 INF: FPGA: Recv T1MOVETO 1
17-02-28 20:17:31.831 -08 000000050 INF: Tilt Motor 1: To move from 5.179 to 5.179 (-0.001 mm) should take 0 steps, but required 1 steps (0.002 mm). Slippage = 0.002 mm (-1.20%)
17-02-28 20:17:31.831 -08 000000087 INF: Tilt Motor 3: To move from 5.269 to 5.271 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:17:31.831 -08 000000050 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:31.831 -08 000000064 INF: Tilt Motor 2: To move from 5.244 to 5.243 (-0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:17:31.832 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:31.834 -08 000000064 INF: FPGA: Xmit T2RD\n
17-02-28 20:17:31.868 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:31.868 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:17:31.893 -08 000000036 INF: FPGA: Recv T1RD 20389
17-02-28 20:17:31.893 -08 000000036 INF: FPGA: Recv T3RD 20751
17-02-28 20:17:31.893 -08 000000036 INF: FPGA: Recv T2RD 20642
17-02-28 20:17:31.893 -08 000000064 INF: Tilt Motor 2: Encoder: at motor step 3440 + 2/6
17-02-28 20:17:31.893 -08 000000064 INF: FPGA: Xmit T2RD\n
17-02-28 20:17:31.894 -08 000000050 INF: Tilt Motor 1: Encoder: at motor step 3398 + 1/6
17-02-28 20:17:31.894 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3458 + 3/6
17-02-28 20:17:31.895 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:31.896 -08 000000050 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:31.908 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:31.914 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:17:31.955 -08 000000085 INF: FPGA: Recv T2RD 20642
17-02-28 20:17:31.955 -08 000000085 INF: FPGA: Recv T3RD 20751
17-02-28 20:17:31.955 -08 000000085 INF: FPGA: Recv T1RD 20389
17-02-28 20:17:31.955 -08 000000050 INF: Tilt Motor 1: Encoder: at motor step 3398 + 1/6
17-02-28 20:17:31.955 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3458 + 3/6
17-02-28 20:17:31.955 -08 000000064 INF: Tilt Motor 2: Encoder: at motor step 3440 + 2/6
17-02-28 20:17:31.955 -08 000000050 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:31.956 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:31.958 -08 000000064 INF: FPGA: Xmit T2RD\n
17-02-28 20:17:32.012 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:32.017 -08 000000105 INF: FPGA: Recv T1RD 20389
17-02-28 20:17:32.017 -08 000000105 INF: FPGA: Recv T3RD 20751
17-02-28 20:17:32.017 -08 000000105 INF: FPGA: Recv T2RD 20642
17-02-28 20:17:32.017 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3458 + 3/6
17-02-28 20:17:32.017 -08 000000087 INF: Tilt Motor 3: After move to 5.2710, error = -0.0003, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:32.017 -08 000000050 INF: Tilt Motor 1: Encoder: at motor step 3398 + 1/6
17-02-28 20:17:32.017 -08 000000087 INF: Tilt Motor 3: Moved to 5.2708 after 392.5557 ms
17-02-28 20:17:32.017 -08 000000050 INF: Tilt Motor 1: After move to 5.1786, error = 0.0003, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:32.017 -08 000000064 INF: Tilt Motor 2: Encoder: at motor step 3440 + 2/6
17-02-28 20:17:32.017 -08 000000064 INF: Tilt Motor 2: After move to 5.2431, error = 0.0000, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:32.017 -08 000000050 INF: Tilt Motor 1: Moved to 5.1788 after 395.7515 ms
17-02-28 20:17:32.017 -08 000000064 INF: Tilt Motor 2: Moved to 5.2431 after 393.6313 ms
17-02-28 20:17:32.018 -08 000000087 INF: ======================================
17-02-28 20:17:32.018 -08 000000064 INF: ======================================
17-02-28 20:17:32.018 -08 000000050 INF: ======================================
17-02-28 20:17:32.018 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:17:32.019 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:32.020 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:32.026 -08 000000018 INF: Transformed XStagePosition from 8.903931 mm to 8.9039306640625 mm.
17-02-28 20:17:32.035 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:17:32.035 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:17:32.035 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:17:32.035 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:32.036 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:32.039 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:17:32.039 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:17:32.039 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:17:32.079 -08 000000090 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:32.079 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:32.080 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:17:32.080 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0707 mm
17-02-28 20:17:32.080 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:17:32.112 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:32.118 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:17:32.144 -08 000000057 INF: FPGA: Recv ZTRG 
17-02-28 20:17:32.144 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:17:32.202 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:32.206 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:17:32.206 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:17:32.206 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:17:32.268 -08 000000090 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:17:32.268 -08 000000090 INF: FPGA: Recv ZMV 
17-02-28 20:17:32.268 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:17:32.268 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.0678 ms
17-02-28 20:17:32.268 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:17:32.330 -08 000000077 INF: FPGA: Recv ZDACR 60292
17-02-28 20:17:32.330 -08 000000018 INF: Z Motor: MoveAndTrigger took 250.3196 ms w/comms
17-02-28 20:17:32.330 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:32.330 -08 000000018 INF: Z Motor: MoveAbsStepped took 250.5173 ms
17-02-28 20:17:32.331 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:32.331 -08 000000018 INF: Transformed XStagePosition from 8.903931 mm to 8.9039306640625 mm.
17-02-28 20:17:32.340 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:17:32.340 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:17:32.340 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:17:32.340 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:17:32.340 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:17:32.394 -08 000000053 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:32.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:32.415 -08 000000018 INF: Transformed XStagePosition from 8.903931 mm to 8.9039306640625 mm.
17-02-28 20:17:32.424 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:17:32.424 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:17:32.424 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:17:32.426 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:32.426 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:17:32.427 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:32.427 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = B_1
17-02-28 20:17:32.427 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:32.428 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:32.429 -08 000000066 INF: ===================MoveEmissionFilters===================
17-02-28 20:17:32.429 -08 000000077 INF: ===================Move X,Y===================
17-02-28 20:17:32.429 -08 000000082 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:32.429 -08 000000077 INF: ===================Move X,Y, Parallel===================
17-02-28 20:17:32.430 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:32.430 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:32.430 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:32.430 -08 000000082 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:32.430 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:32.431 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:32.431 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:32.431 -08 000000050 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:17:32.431 -08 000000075 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:17:32.431 -08 000000050 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:17:32.431 -08 000000109 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:17:32.432 -08 000000086 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:17:32.432 -08 000000087 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:17:32.432 -08 000000030 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:32.432 -08 000000105 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:17:32.432 -08 000000051 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:17:32.432 -08 000000075 INF: ======================================
17-02-28 20:17:32.432 -08 000000030 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8249 mm
17-02-28 20:17:32.432 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:32.432 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:32.432 -08 000000047 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:17:32.432 -08 000000064 INF: ===================Move X Motor without settling===================
17-02-28 20:17:32.432 -08 000000086 INF: ======================================
17-02-28 20:17:32.432 -08 000000064 INF: X Motor: Xmit PR VM\n
17-02-28 20:17:32.432 -08 000000051 INF: ======================================
17-02-28 20:17:32.433 -08 000000087 INF: ======================================
17-02-28 20:17:32.433 -08 000000109 INF: ======================================
17-02-28 20:17:32.434 -08 000000047 INF: ======================================
17-02-28 20:17:32.434 -08 000000050 INF: ======================================
17-02-28 20:17:32.435 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:32.435 -08 000000105 INF: ======================================
17-02-28 20:17:32.435 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:32.436 -08 000000082 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:32.436 -08 000000036 INF: ======================================
17-02-28 20:17:32.436 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:32.436 -08 000000034 INF: ======================================
17-02-28 20:17:32.437 -08 000000082 INF: ======================================
17-02-28 20:17:32.438 -08 000000073 INF: ======================================
17-02-28 20:17:32.438 -08 000000066 INF: ======================================
17-02-28 20:17:32.480 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:17:32.518 -08 000000064 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:17:32.518 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:17:32.518 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:32.518 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:32.518 -08 000000064 INF: X Motor: Xmit PR VI\n
17-02-28 20:17:32.580 -08 000000064 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:17:32.580 -08 000000064 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:17:32.580 -08 000000064 INF: X Motor: Moving to 8.9039 mm @15.000 mm/sec, started at 6.6978 mm
17-02-28 20:17:32.580 -08 000000064 INF: X Motor: Xmit MA -20519\n
17-02-28 20:17:32.582 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:17:32.582 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:32.646 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:17:32.646 -08 000000064 INF: X Motor: Recv MA -20519\r\n>
17-02-28 20:17:32.646 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:32.646 -08 000000064 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:17:32.646 -08 000000030 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:17:32.646 -08 000000030 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:17:32.705 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:17:32.705 -08 000000030 INF: Y Motor: Start the move command
17-02-28 20:17:32.705 -08 000000030 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:32.770 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:17:32.770 -08 000000030 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:17:32.770 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:32.894 -08 000000030 INF: Y Motor: Unshifted Position: 1067384
17-02-28 20:17:32.944 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:33.068 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:33.204 -08 000000030 INF: Y Motor: Unshifted Position: 1771643
17-02-28 20:17:33.254 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:33.270 -08 000000064 INF: X Motor: Xmit PR ER\n
17-02-28 20:17:33.329 -08 000000064 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:17:33.329 -08 000000064 INF: X Motor: Moved to 8.9048 after 683 ms
17-02-28 20:17:33.329 -08 000000064 INF: ======================================
17-02-28 20:17:33.379 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:33.517 -08 000000030 INF: Y Motor: Unshifted Position: 2559171
17-02-28 20:17:33.567 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:33.691 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:33.830 -08 000000030 INF: Y Motor: Unshifted Position: 3337451
17-02-28 20:17:33.880 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.004 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.140 -08 000000030 INF: Y Motor: Unshifted Position: 4112522
17-02-28 20:17:34.190 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.320 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.454 -08 000000030 INF: Y Motor: Unshifted Position: 4898292
17-02-28 20:17:34.504 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.629 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.767 -08 000000030 INF: Y Motor: Unshifted Position: 5674243
17-02-28 20:17:34.817 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.939 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:35.078 -08 000000030 INF: Y Motor: Unshifted Position: 5947055
17-02-28 20:17:35.078 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:35.078 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:35.140 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:17:35.140 -08 000000030 INF: Y Motor: Moved to 64.4706 after 2370 ms
17-02-28 20:17:35.140 -08 000000030 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:35.202 -08 000000030 INF: Y Motor: Recv v 4096\r
17-02-28 20:17:35.202 -08 000000030 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:35.202 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:35.264 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:17:35.264 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:35.264 -08 000000030 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:35.326 -08 000000030 INF: Y Motor: Recv v 402653184\r
17-02-28 20:17:35.326 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:17:35.326 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:35.326 -08 000000030 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:35.388 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:17:35.388 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:35.388 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:35.388 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:35.454 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:17:35.454 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:35.454 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:35.513 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:17:35.513 -08 000000030 INF: ======================================
17-02-28 20:17:35.514 -08 000000077 INF: ===================Move X,Y===================
17-02-28 20:17:35.515 -08 000000077 INF: ======================================
17-02-28 20:17:35.517 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:35.517 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:35.518 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:17:35.518 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:17:35.575 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:35.575 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:17:35.638 -08 000000052 INF: FPGA: Recv ZFREQCL
17-02-28 20:17:35.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:17:35.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:35.639 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:35.701 -08 000000073 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:17:35.701 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:17:35.702 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:35.703 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:35.703 -08 000000087 INF: ===================Set YMotor gains for scans===================
17-02-28 20:17:35.704 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:17:35.704 -08 000000087 INF: ======================================
17-02-28 20:17:35.705 -08 000000077 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:17:35.705 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:17:35.708 -08 000000077 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:17:35.709 -08 000000077 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:17:35.709 -08 000000077 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:17:35.762 -08 000000052 INF: FPGA: Recv TDIYPOS
17-02-28 20:17:35.763 -08 000000077 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:17:35.764 -08 000000077 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:17:35.764 -08 000000077 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:17:35.824 -08 000000010 INF: FPGA: Recv TDIYARM2
17-02-28 20:17:35.825 -08 000000077 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:17:35.827 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:17:35.829 -08 000000077 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:17:35.829 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:17:35.832 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:17:35.833 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:17:35.834 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:36.206 -08 000000077 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:17:36.206 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:17:36.206 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:36.221 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:17:36.223 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:36.601 -08 000000077 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:17:36.601 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:17:36.601 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:36.617 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:17:36.619 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:17:36.621 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:17:36.623 -08 000000077 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:36.624 -08 000000077 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:17:36.625 -08 000000077 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:36.627 -08 000000077 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:17:36.628 -08 000000077 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:17:36.628 -08 000000077 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:17:36.628 -08 000000077 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:17:36.635 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:17:36.635 -08 000000077 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:17:36.635 -08 000000077 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:17:36.701 -08 000000045 INF: FPGA: Recv ZARM
17-02-28 20:17:36.701 -08 000000077 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.8003 ms
17-02-28 20:17:36.701 -08 000000077 INF: Z Motor: ArmAbsStepped took 73.2402 ms
17-02-28 20:17:36.701 -08 000000077 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:36.703 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:17:36.704 -08 000000077 INF: ======================================
17-02-28 20:17:36.705 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:36.706 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:36.706 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:36.706 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:36.707 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:36.708 -08 000000060 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:17:36.708 -08 000000060 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:17:36.708 -08 000000060 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:17:36.708 -08 000000060 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:17:36.708 -08 000000060 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:17:36.708 -08 000000105 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:17:36.709 -08 000000105 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:17:36.709 -08 000000105 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:17:36.709 -08 000000105 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:17:36.710 -08 000000105 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:17:37.073 -08 000000036 INF: FPGA: Recv EX1MV
17-02-28 20:17:37.073 -08 000000036 INF: FPGA: Recv EX2MV
17-02-28 20:17:37.073 -08 000000105 INF: Excitation Filter 2: Moved -107 steps in 364.4052 ms
17-02-28 20:17:37.073 -08 000000105 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 364.6208 ms
17-02-28 20:17:37.073 -08 000000105 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 364.7329 ms
17-02-28 20:17:37.074 -08 000000060 INF: Excitation Filter 1: Moved -107 steps in 364.8412 ms
17-02-28 20:17:37.074 -08 000000060 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.4244 ms
17-02-28 20:17:37.074 -08 000000060 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.5164 ms
17-02-28 20:17:37.074 -08 000000105 INF: ======================================
17-02-28 20:17:37.074 -08 000000060 INF: ======================================
17-02-28 20:17:37.076 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:37.078 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:37.079 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:17:37.079 -08 000000108 INF: ===================Serial===================
17-02-28 20:17:37.079 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:37.079 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:37.080 -08 000000038 INF: ===================Camera TDI, Parallel===================
17-02-28 20:17:37.080 -08 000000089 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:17:37.080 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:37.080 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:37.080 -08 000000108 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:17:37.080 -08 000000108 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:17:37.081 -08 000000082 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:17:37.081 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:17:37.081 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:17:37.082 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.082 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.083 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.083 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.086 -08 000000082 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:17:37.137 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:17:37.137 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:37.137 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:37.199 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:17:37.199 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:37.232 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.232 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.233 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.233 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.261 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:17:37.261 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:37.261 -08 000000089 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:17:37.261 -08 000000089 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:17:37.327 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:17:37.327 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:17:37.327 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:37.382 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.382 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.383 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.383 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.388 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:17:37.388 -08 000000089 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:17:37.388 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:37.513 -08 000000089 INF: Y Motor: Unshifted Position: 5929483
17-02-28 20:17:37.532 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.532 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.533 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.533 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.563 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:37.682 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:17:37.682 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:17:37.682 -08 000000045 INF: ===================Camera #2 Frame #1===================
17-02-28 20:17:37.683 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:17:37.683 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:17:37.683 -08 000000053 INF: ===================Camera #0 Frame #1===================
17-02-28 20:17:37.686 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:37.825 -08 000000089 INF: Y Motor: Unshifted Position: 5882679
17-02-28 20:17:37.836 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:17:37.836 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:17:37.836 -08 000000045 INF: ===================Camera #2 Frame #3===================
17-02-28 20:17:37.837 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:17:37.837 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:17:37.837 -08 000000053 INF: ===================Camera #0 Frame #3===================
17-02-28 20:17:37.875 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:37.992 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:17:37.992 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:17:37.992 -08 000000045 INF: ===================Camera #2 Frame #4===================
17-02-28 20:17:37.993 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:17:37.993 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:17:37.993 -08 000000053 INF: ===================Camera #0 Frame #4===================
17-02-28 20:17:37.999 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:38.135 -08 000000089 INF: Y Motor: Unshifted Position: 5835674
17-02-28 20:17:38.146 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:38.146 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:38.146 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:38.146 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:38.146 -08 000000045 INF: ===================Camera #2 Frame #5===================
17-02-28 20:17:38.146 -08 000000053 INF: ===================Camera #0 Frame #5===================
17-02-28 20:17:38.185 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:38.195 -08 000000058 INF: FPGA: Recv ZWAIT 
17-02-28 20:17:38.195 -08 000000058 INF: FPGA: Recv TDIYWAIT
17-02-28 20:17:38.195 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:38.195 -08 000000108 INF: ===================Serial===================
17-02-28 20:17:38.197 -08 000000082 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:17:38.197 -08 000000108 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:17:38.198 -08 000000108 INF: ===================Serial===================
17-02-28 20:17:38.198 -08 000000069 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:17:38.198 -08 000000010 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:17:38.198 -08 000000069 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:17:38.198 -08 000000069 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:17:38.198 -08 000000069 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:17:38.198 -08 000000010 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:17:38.198 -08 000000069 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:17:38.198 -08 000000010 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:17:38.198 -08 000000010 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:17:38.199 -08 000000010 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:17:38.199 -08 000000108 INF: ======================================
17-02-28 20:17:38.299 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:17:38.299 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:17:38.299 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:17:38.299 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:17:38.299 -08 000000045 INF: ===================Camera #2 Frame #6===================
17-02-28 20:17:38.300 -08 000000053 INF: ===================Camera #0 Frame #6===================
17-02-28 20:17:38.303 -08 000000045 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:17:38.304 -08 000000045 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:38.305 -08 000000053 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:17:38.306 -08 000000053 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:38.309 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:38.330 -08 000000045 INF: Camera #2 ReleaseBuffer
17-02-28 20:17:38.330 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:17:38.331 -08 000000045 INF: ======================================
17-02-28 20:17:38.357 -08 000000053 INF: Camera #0 ReleaseBuffer
17-02-28 20:17:38.357 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:17:38.358 -08 000000053 INF: ======================================
17-02-28 20:17:38.360 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:17:38.361 -08 000000038 INF: ======================================
17-02-28 20:17:38.450 -08 000000089 INF: Y Motor: Unshifted Position: 5790761
17-02-28 20:17:38.500 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:38.570 -08 000000072 INF: FPGA: Recv EX1MV
17-02-28 20:17:38.570 -08 000000072 INF: FPGA: Recv EX2MV
17-02-28 20:17:38.570 -08 000000069 INF: Excitation Filter 1: Moved 107 steps in 371.6911 ms
17-02-28 20:17:38.570 -08 000000010 INF: Excitation Filter 2: Moved 107 steps in 371.5489 ms
17-02-28 20:17:38.570 -08 000000069 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.8549 ms
17-02-28 20:17:38.570 -08 000000069 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.9636 ms
17-02-28 20:17:38.570 -08 000000010 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8029 ms
17-02-28 20:17:38.570 -08 000000010 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.9902 ms
17-02-28 20:17:38.570 -08 000000010 INF: ======================================
17-02-28 20:17:38.571 -08 000000069 INF: ======================================
17-02-28 20:17:38.572 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:38.573 -08 000000082 INF: ======================================
17-02-28 20:17:38.635 -08 000000089 INF: Y Motor: Unshifted Position: 5790744
17-02-28 20:17:38.635 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:38.635 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:38.696 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:17:38.696 -08 000000089 INF: Y Motor: Moved to 62.9074 after 1307 ms
17-02-28 20:17:38.696 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:38.761 -08 000000089 INF: Y Motor: Recv v 4097\r
17-02-28 20:17:38.761 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:38.761 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:38.823 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:17:38.823 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:38.823 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:38.885 -08 000000089 INF: Y Motor: Recv v 134217728\r
17-02-28 20:17:38.885 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:17:38.885 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:38.885 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:38.949 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:17:38.949 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:38.949 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:38.949 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:39.009 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:17:39.009 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:39.009 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:39.071 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:17:39.071 -08 000000089 INF: ======================================
17-02-28 20:17:39.072 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:39.074 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:39.074 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.075 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:17:39.131 -08 000000064 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:17:39.131 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:39.193 -08 000000050 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:17:39.193 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:17:39.258 -08 000000073 INF: FPGA: Recv ZADCR 2425
17-02-28 20:17:39.258 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:17:39.258 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:17:39.320 -08 000000045 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:17:39.320 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:17:39.320 -08 000000018 INF: TDIScan finished after 6904.0711 ms
17-02-28 20:17:39.320 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:17:39.320 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:17:39.320 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:17:39.382 -08 000000010 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:17:39.383 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.384 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.385 -08 000000053 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:17:39.385 -08 000000069 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:17:39.385 -08 000000053 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:17:39.385 -08 000000053 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:17:39.385 -08 000000060 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:17:39.385 -08 000000069 INF: ======================================
17-02-28 20:17:39.385 -08 000000060 INF: ======================================
17-02-28 20:17:39.446 -08 000000053 INF: Y Motor: Recv ok\r
17-02-28 20:17:39.446 -08 000000053 INF: ======================================
17-02-28 20:17:39.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:17:39.517 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.517 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:17:39.584 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.584 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:17:39.625 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.626 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:17:39.682 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.683 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:39.683 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:39.684 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:17:39.692 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:39.692 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:17:39.692 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:17:40.330 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:17:40.353 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0480988111232224Best Z position at top surface = -0.119421278105909Best Z position at top surface + compensator offset = -0.0967212781059089 C:3,L:2,B
17-02-28 20:17:40.354 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.119421278105909
17-02-28 20:17:40.354 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.7187
17-02-28 20:17:40.354 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0480988111232224
17-02-28 20:17:40.354 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.37508
17-02-28 20:17:40.354 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0480988111232224.
17-02-28 20:17:40.354 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:40.491 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:17:40.491 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:17:40.506 -08 000000053 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:40.507 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:40.508 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.508 -08 000000018 INF: Lane 2, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:17:40.509 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.509 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.510 -08 000000025 INF: ===================Move Tilt Motor 2===================
17-02-28 20:17:40.510 -08 000000087 INF: ===================Move Tilt Motor 1===================
17-02-28 20:17:40.510 -08 000000057 INF: ===================Move Tilt Motor 3===================
17-02-28 20:17:40.511 -08 000000057 INF: ======================================
17-02-28 20:17:40.511 -08 000000025 INF: ======================================
17-02-28 20:17:40.511 -08 000000087 INF: ======================================
17-02-28 20:17:40.512 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.513 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.514 -08 000000018 INF: ETF Best Z: -0.04809881 mm (12609 DAC)
17-02-28 20:17:40.514 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.515 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.515 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:17:40.515 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.516 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.522 -08 000000018 INF: Swath 1 position calculated to be: {X=8.332335, Y=39.70494} from estimated center X= 8.826996, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:17:40.522 -08 000000018 INF: Swath 2 position calculated to be: {X=9.440335, Y=39.70494} from estimated center X= 8.826996, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:17:40.970 -08 000000018 INF: Swath 0: Converted transform from (90.70673, -55.9619) pixels to (0.031395, -0.01932) mm.
17-02-28 20:17:40.976 -08 000000018 INF: Swath 1: Converted transform from (64.98017, -49.59494) pixels to (0.022425, -0.01725) mm.
17-02-28 20:17:40.977 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494===================
17-02-28 20:17:40.978 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494===================
17-02-28 20:17:40.978 -08 000000018 INF: Transformed XStagePosition from 8.332335 mm to 8.36373047158122 mm.
17-02-28 20:17:40.989 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4756257397831 mm.
17-02-28 20:17:40.989 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2756257397831 mm.
17-02-28 20:17:40.989 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.366375739783 mm.
17-02-28 20:17:40.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:40.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:17:40.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:40.992 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = B_1
17-02-28 20:17:40.997 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:40.998 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:40.999 -08 000000089 INF: ===================MoveEmissionFilters===================
17-02-28 20:17:40.999 -08 000000033 INF: ===================Move X,Y===================
17-02-28 20:17:40.999 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:40.999 -08 000000057 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:41.000 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:41.000 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:41.000 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:17:41.000 -08 000000075 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:41.000 -08 000000053 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:17:41.000 -08 000000033 INF: ===================Move X,Y, Parallel===================
17-02-28 20:17:41.000 -08 000000053 INF: Z Motor: Moving to -0.0681 mm, started at -0.0100 mm
17-02-28 20:17:41.000 -08 000000053 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:17:41.000 -08 000000057 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:41.000 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:41.000 -08 000000075 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:41.001 -08 000000030 INF: ===================Move X Motor without settling===================
17-02-28 20:17:41.001 -08 000000109 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:41.001 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:41.001 -08 000000030 INF: X Motor: Xmit PR VM\n
17-02-28 20:17:41.001 -08 000000109 INF: Y Motor: Moving to 64.4756 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:17:41.001 -08 000000078 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:17:41.001 -08 000000109 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:41.001 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:41.001 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:17:41.001 -08 000000101 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:17:41.001 -08 000000072 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:17:41.001 -08 000000108 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:17:41.001 -08 000000086 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:17:41.002 -08 000000086 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:17:41.002 -08 000000072 INF: ======================================
17-02-28 20:17:41.002 -08 000000035 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:17:41.002 -08 000000045 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:17:41.002 -08 000000036 INF: ======================================
17-02-28 20:17:41.002 -08 000000108 INF: ======================================
17-02-28 20:17:41.002 -08 000000045 INF: ======================================
17-02-28 20:17:41.003 -08 000000101 INF: ======================================
17-02-28 20:17:41.003 -08 000000086 INF: ======================================
17-02-28 20:17:41.003 -08 000000035 INF: ======================================
17-02-28 20:17:41.003 -08 000000075 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:41.004 -08 000000057 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:41.004 -08 000000078 INF: ======================================
17-02-28 20:17:41.004 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:41.005 -08 000000075 INF: ======================================
17-02-28 20:17:41.005 -08 000000057 INF: ======================================
17-02-28 20:17:41.006 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:41.006 -08 000000087 INF: ======================================
17-02-28 20:17:41.007 -08 000000025 INF: ======================================
17-02-28 20:17:41.008 -08 000000089 INF: ======================================
17-02-28 20:17:41.021 -08 000000038 INF: FPGA: Recv ZTRG 
17-02-28 20:17:41.021 -08 000000053 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:17:41.023 -08 000000030 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:17:41.023 -08 000000030 INF: X Motor: Xmit PR VI\n
17-02-28 20:17:41.083 -08 000000078 INF: FPGA: Recv ZYT 
17-02-28 20:17:41.083 -08 000000053 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:17:41.083 -08 000000053 INF: FPGA: Xmit ZMV 17851\n
17-02-28 20:17:41.085 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:41.085 -08 000000109 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:41.085 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:41.085 -08 000000030 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:17:41.085 -08 000000030 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:17:41.085 -08 000000030 INF: X Motor: Moving to 8.3637 mm @15.000 mm/sec, started at 8.9048 mm
17-02-28 20:17:41.085 -08 000000030 INF: X Motor: Xmit MA -20741\n
17-02-28 20:17:41.145 -08 000000039 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:17:41.145 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:17:41.147 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:41.147 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:41.147 -08 000000030 INF: X Motor: Recv MA -20741\r\n>
17-02-28 20:17:41.147 -08 000000030 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:17:41.207 -08 000000025 INF: FPGA: Recv ZMV 
17-02-28 20:17:41.207 -08 000000053 INF: Z Motor: MoveAndTrigger 'ZMV' command took 123.9923 ms
17-02-28 20:17:41.207 -08 000000053 INF: FPGA: Xmit ZDACR\n
17-02-28 20:17:41.209 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:41.209 -08 000000109 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:41.209 -08 000000109 INF: Y Motor: Set target position to 5947563 encoder counts
17-02-28 20:17:41.209 -08 000000109 INF: Y Motor: Xmit s r0xca 5947563\r
17-02-28 20:17:41.269 -08 000000039 INF: FPGA: Recv ZDACR 17851
17-02-28 20:17:41.269 -08 000000053 INF: Z Motor: MoveAndTrigger took 269.0945 ms w/comms
17-02-28 20:17:41.269 -08 000000053 INF: Z Motor: After move to -0.0681, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:41.269 -08 000000053 INF: Z Motor: MoveAbsStepped took 269.2607 ms
17-02-28 20:17:41.269 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:41.271 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:41.271 -08 000000109 INF: Y Motor: Start the move command
17-02-28 20:17:41.271 -08 000000109 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:41.271 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:17:41.272 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:17:41.272 -08 000000050 INF: ===================Camera Arm TDI===================
17-02-28 20:17:41.273 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:41.273 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:41.273 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:41.273 -08 000000050 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:41.274 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:41.274 -08 000000089 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:17:41.331 -08 000000086 INF: FPGA: Recv ZSEL 
17-02-28 20:17:41.332 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:41.332 -08 000000089 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:17:41.333 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:41.333 -08 000000109 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:17:41.333 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:41.395 -08 000000010 INF: FPGA: Recv TDIBB
17-02-28 20:17:41.396 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:41.397 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:41.397 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:41.399 -08 000000089 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:17:41.399 -08 000000089 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:17:41.399 -08 000000089 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:17:41.455 -08 000000066 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:41.455 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:41.457 -08 000000109 INF: Y Motor: Unshifted Position: 5872627
17-02-28 20:17:41.457 -08 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:17:41.457 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:41.459 -08 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:17:41.459 -08 000000089 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:17:41.459 -08 000000089 INF: Z Motor: Arming to move to -0.0281 mm
17-02-28 20:17:41.459 -08 000000089 INF: FPGA: Xmit ZYT 6427563 4\n
17-02-28 20:17:41.507 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:41.520 -08 000000077 INF: FPGA: Recv ZYT 
17-02-28 20:17:41.520 -08 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6372627 enc / 63.726 mm / ) = 6427563 enc / 64.276 mm
17-02-28 20:17:41.520 -08 000000089 INF: FPGA: Xmit ZARM 7366\n
17-02-28 20:17:41.582 -08 000000064 INF: FPGA: Recv ZARM
17-02-28 20:17:41.582 -08 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.2096 ms
17-02-28 20:17:41.582 -08 000000089 INF: Z Motor: ArmAbsStepped took 123.1541 ms
17-02-28 20:17:41.582 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:41.584 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:17:41.585 -08 000000030 INF: X Motor: Xmit PR ER\n
17-02-28 20:17:41.585 -08 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:17:41.586 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:17:41.587 -08 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:17:41.587 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:17:41.589 -08 000000089 INF: ======================================
17-02-28 20:17:41.634 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:41.646 -08 000000030 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:17:41.646 -08 000000030 INF: X Motor: Moved to 8.3628 after 498 ms
17-02-28 20:17:41.646 -08 000000030 INF: ======================================
17-02-28 20:17:41.770 -08 000000109 INF: Y Motor: Unshifted Position: 5947564
17-02-28 20:17:41.770 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:41.770 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:41.832 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:41.832 -08 000000109 INF: Y Motor: Moved to 64.4756 after 499 ms
17-02-28 20:17:41.832 -08 000000109 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:41.894 -08 000000109 INF: Y Motor: Recv v 4096\r
17-02-28 20:17:41.894 -08 000000109 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:41.894 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:41.960 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:41.960 -08 000000109 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:41.960 -08 000000109 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:42.019 -08 000000109 INF: Y Motor: Recv v 402653184\r
17-02-28 20:17:42.019 -08 000000109 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:17:42.019 -08 000000109 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:42.019 -08 000000109 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:42.083 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:42.083 -08 000000109 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:42.083 -08 000000109 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:42.083 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:42.146 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:42.146 -08 000000109 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:42.146 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:42.208 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:42.208 -08 000000109 INF: ======================================
17-02-28 20:17:42.209 -08 000000033 INF: ===================Move X,Y===================
17-02-28 20:17:42.210 -08 000000033 INF: ======================================
17-02-28 20:17:42.248 -08 000000050 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:42.248 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:42.248 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:42.263 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:42.265 -08 000000050 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:43.322 -08 000000050 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:43.322 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:43.322 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:43.337 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:43.339 -08 000000050 INF: ===================Camera Arm TDI===================
17-02-28 20:17:43.340 -08 000000050 INF: ======================================
17-02-28 20:17:43.341 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:43.342 -08 000000053 INF: ======================================
17-02-28 20:17:43.343 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:43.344 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:43.344 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:17:43.344 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:17:43.392 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:43.392 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:17:43.452 -08 000000066 INF: FPGA: Recv ZFREQCL
17-02-28 20:17:43.452 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:17:43.452 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:43.452 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:43.514 -08 000000105 INF: FPGA: Recv TDIYERD 6447564
17-02-28 20:17:43.514 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447564 counts (64.476 mm)
17-02-28 20:17:43.514 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:43.515 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:43.515 -08 000000109 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:43.515 -08 000000101 INF: ===================Set YMotor gains for scans===================
17-02-28 20:17:43.516 -08 000000101 INF: ======================================
17-02-28 20:17:43.516 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:43.517 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:17:43.517 -08 000000109 INF: FPGA: Xmit TDIYPOS 6336638\n
17-02-28 20:17:43.579 -08 000000050 INF: FPGA: Recv TDIYPOS
17-02-28 20:17:43.579 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:43.581 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:17:43.581 -08 000000109 INF: FPGA: Xmit TDIYARM3 139264 6427563 1 1\n
17-02-28 20:17:43.641 -08 000000082 INF: FPGA: Recv TDIYARM3
17-02-28 20:17:43.641 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:43.642 -08 000000109 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:43.643 -08 000000109 INF: ======================================
17-02-28 20:17:43.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:43.645 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:43.645 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:43.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:43.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:43.647 -08 000000036 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:17:43.647 -08 000000038 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:17:43.647 -08 000000036 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:17:43.647 -08 000000036 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:17:43.647 -08 000000036 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:17:43.647 -08 000000038 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:17:43.647 -08 000000038 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:17:43.647 -08 000000038 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:17:43.647 -08 000000036 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:17:43.650 -08 000000038 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:17:44.016 -08 000000087 INF: FPGA: Recv EX2MV
17-02-28 20:17:44.016 -08 000000087 INF: FPGA: Recv EX1MV
17-02-28 20:17:44.016 -08 000000036 INF: Excitation Filter 2: Moved -107 steps in 368.7672 ms
17-02-28 20:17:44.016 -08 000000038 INF: Excitation Filter 1: Moved -107 steps in 368.6749 ms
17-02-28 20:17:44.016 -08 000000036 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.8611 ms
17-02-28 20:17:44.016 -08 000000036 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.9649 ms
17-02-28 20:17:44.016 -08 000000038 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.7991 ms
17-02-28 20:17:44.016 -08 000000038 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.9698 ms
17-02-28 20:17:44.016 -08 000000036 INF: ======================================
17-02-28 20:17:44.016 -08 000000038 INF: ======================================
17-02-28 20:17:44.017 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:44.018 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:44.019 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:17:44.019 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:44.019 -08 000000077 INF: ===================FPGA Z Wait===================
17-02-28 20:17:44.019 -08 000000069 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:44.019 -08 000000077 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:17:44.020 -08 000000069 INF: Y Motor: Moving to 14.8273 mm @6.500 mm/sec, started at 64.4756 mm
17-02-28 20:17:44.020 -08 000000069 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:44.020 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:44.020 -08 000000039 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:17:44.020 -08 000000057 INF: ===================Camera TDI, Parallel===================
17-02-28 20:17:44.021 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:17:44.021 -08 000000039 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:17:44.021 -08 000000060 INF: ===================Camera TDI===================
17-02-28 20:17:44.022 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:44.022 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:44.023 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:44.023 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:44.080 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:17:44.080 -08 000000069 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:44.080 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:44.142 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:17:44.142 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:44.172 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:44.172 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:44.173 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:44.173 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:44.204 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:17:44.204 -08 000000069 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:44.204 -08 000000069 INF: Y Motor: Set target position to 982729 encoder counts
17-02-28 20:17:44.204 -08 000000069 INF: Y Motor: Xmit s r0xca 982729\r
17-02-28 20:17:44.266 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:17:44.266 -08 000000069 INF: Y Motor: Start the move command
17-02-28 20:17:44.266 -08 000000069 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:44.322 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:44.322 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:44.323 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:44.323 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:44.328 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:17:44.328 -08 000000069 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:17:44.328 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:44.388 -08 000000034 INF: FPGA: Recv ZWAIT 
17-02-28 20:17:44.388 -08 000000077 INF: ======================================
17-02-28 20:17:44.452 -08 000000069 INF: Y Motor: Unshifted Position: 5885703
17-02-28 20:17:44.472 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:44.472 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:44.472 -08 000000101 INF: ===================Camera #0 Frame #5===================
17-02-28 20:17:44.473 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:44.473 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:44.473 -08 000000060 INF: ===================Camera #2 Frame #5===================
17-02-28 20:17:44.502 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:44.630 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:44.639 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:44.639 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:44.639 -08 000000101 INF: ===================Camera #0 Frame #11===================
17-02-28 20:17:44.640 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:44.640 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:44.640 -08 000000060 INF: ===================Camera #2 Frame #11===================
17-02-28 20:17:44.766 -08 000000069 INF: Y Motor: Unshifted Position: 5682042
17-02-28 20:17:44.809 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:44.809 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:44.809 -08 000000101 INF: ===================Camera #0 Frame #17===================
17-02-28 20:17:44.811 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:44.811 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:44.811 -08 000000060 INF: ===================Camera #2 Frame #17===================
17-02-28 20:17:44.816 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:44.939 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:44.979 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:17:44.979 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:17:44.979 -08 000000101 INF: ===================Camera #0 Frame #23===================
17-02-28 20:17:44.982 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:17:44.982 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:17:44.982 -08 000000060 INF: ===================Camera #2 Frame #23===================
17-02-28 20:17:45.076 -08 000000069 INF: Y Motor: Unshifted Position: 5479679
17-02-28 20:17:45.126 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:45.149 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:17:45.149 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:17:45.149 -08 000000101 INF: ===================Camera #0 Frame #29===================
17-02-28 20:17:45.153 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:17:45.153 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:17:45.153 -08 000000060 INF: ===================Camera #2 Frame #30===================
17-02-28 20:17:45.253 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:45.317 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:17:45.317 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:17:45.317 -08 000000101 INF: ===================Camera #0 Frame #36===================
17-02-28 20:17:45.326 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:17:45.326 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:17:45.326 -08 000000060 INF: ===================Camera #2 Frame #36===================
17-02-28 20:17:45.389 -08 000000069 INF: Y Motor: Unshifted Position: 5276229
17-02-28 20:17:45.439 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:45.489 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:17:45.489 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:17:45.490 -08 000000101 INF: ===================Camera #0 Frame #42===================
17-02-28 20:17:45.495 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:17:45.495 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:17:45.495 -08 000000060 INF: ===================Camera #2 Frame #42===================
17-02-28 20:17:45.564 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:45.658 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:17:45.658 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:17:45.658 -08 000000101 INF: ===================Camera #0 Frame #48===================
17-02-28 20:17:45.664 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:17:45.664 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:17:45.664 -08 000000060 INF: ===================Camera #2 Frame #48===================
17-02-28 20:17:45.702 -08 000000069 INF: Y Motor: Unshifted Position: 5072782
17-02-28 20:17:45.752 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:45.827 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:17:45.827 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:17:45.827 -08 000000101 INF: ===================Camera #0 Frame #54===================
17-02-28 20:17:45.833 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:17:45.833 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:17:45.833 -08 000000060 INF: ===================Camera #2 Frame #55===================
17-02-28 20:17:45.876 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:45.996 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:17:45.996 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:17:45.996 -08 000000101 INF: ===================Camera #0 Frame #61===================
17-02-28 20:17:46.006 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:17:46.006 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:17:46.006 -08 000000060 INF: ===================Camera #2 Frame #61===================
17-02-28 20:17:46.013 -08 000000069 INF: Y Motor: Unshifted Position: 4871062
17-02-28 20:17:46.063 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:46.168 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:17:46.168 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:17:46.168 -08 000000101 INF: ===================Camera #0 Frame #67===================
17-02-28 20:17:46.175 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:17:46.175 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:17:46.175 -08 000000060 INF: ===================Camera #2 Frame #67===================
17-02-28 20:17:46.191 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:46.326 -08 000000069 INF: Y Motor: Unshifted Position: 4667612
17-02-28 20:17:46.338 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:17:46.338 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:17:46.338 -08 000000101 INF: ===================Camera #0 Frame #73===================
17-02-28 20:17:46.345 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:17:46.345 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:17:46.345 -08 000000060 INF: ===================Camera #2 Frame #73===================
17-02-28 20:17:46.376 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:46.500 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:46.507 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:17:46.507 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:17:46.507 -08 000000101 INF: ===================Camera #0 Frame #79===================
17-02-28 20:17:46.514 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:17:46.514 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:17:46.514 -08 000000060 INF: ===================Camera #2 Frame #80===================
17-02-28 20:17:46.637 -08 000000069 INF: Y Motor: Unshifted Position: 4463285
17-02-28 20:17:46.675 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:17:46.675 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:17:46.675 -08 000000101 INF: ===================Camera #0 Frame #86===================
17-02-28 20:17:46.687 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:46.687 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:17:46.687 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:17:46.687 -08 000000060 INF: ===================Camera #2 Frame #86===================
17-02-28 20:17:46.814 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:46.847 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:17:46.847 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:17:46.847 -08 000000101 INF: ===================Camera #0 Frame #92===================
17-02-28 20:17:46.857 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:17:46.857 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:17:46.857 -08 000000060 INF: ===================Camera #2 Frame #92===================
17-02-28 20:17:46.950 -08 000000069 INF: Y Motor: Unshifted Position: 4261566
17-02-28 20:17:47.000 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:47.017 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:17:47.017 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:17:47.017 -08 000000101 INF: ===================Camera #0 Frame #98===================
17-02-28 20:17:47.028 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:17:47.028 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:17:47.028 -08 000000060 INF: ===================Camera #2 Frame #99===================
17-02-28 20:17:47.124 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:47.187 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:17:47.187 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:17:47.187 -08 000000101 INF: ===================Camera #0 Frame #104===================
17-02-28 20:17:47.202 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:17:47.202 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:17:47.202 -08 000000060 INF: ===================Camera #2 Frame #105===================
17-02-28 20:17:47.261 -08 000000069 INF: Y Motor: Unshifted Position: 4057467
17-02-28 20:17:47.311 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:47.357 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:17:47.357 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:17:47.357 -08 000000101 INF: ===================Camera #0 Frame #111===================
17-02-28 20:17:47.373 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:17:47.373 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:17:47.373 -08 000000060 INF: ===================Camera #2 Frame #111===================
17-02-28 20:17:47.437 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:47.529 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:17:47.529 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:17:47.529 -08 000000101 INF: ===================Camera #0 Frame #117===================
17-02-28 20:17:47.542 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:17:47.542 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:17:47.543 -08 000000060 INF: ===================Camera #2 Frame #118===================
17-02-28 20:17:47.573 -08 000000069 INF: Y Motor: Unshifted Position: 3856613
17-02-28 20:17:47.623 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:47.697 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:17:47.697 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:17:47.697 -08 000000101 INF: ===================Camera #0 Frame #123===================
17-02-28 20:17:47.715 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:17:47.715 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:17:47.715 -08 000000060 INF: ===================Camera #2 Frame #124===================
17-02-28 20:17:47.750 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:47.867 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:17:47.867 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:17:47.867 -08 000000101 INF: ===================Camera #0 Frame #130===================
17-02-28 20:17:47.886 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:17:47.886 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:17:47.886 -08 000000060 INF: ===================Camera #2 Frame #130===================
17-02-28 20:17:47.888 -08 000000069 INF: Y Motor: Unshifted Position: 3652947
17-02-28 20:17:47.938 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.039 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:17:48.039 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:17:48.039 -08 000000101 INF: ===================Camera #0 Frame #136===================
17-02-28 20:17:48.056 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:17:48.056 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:17:48.056 -08 000000060 INF: ===================Camera #2 Frame #136===================
17-02-28 20:17:48.060 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.197 -08 000000069 INF: Y Motor: Unshifted Position: 3448626
17-02-28 20:17:48.209 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:17:48.209 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:17:48.209 -08 000000101 INF: ===================Camera #0 Frame #142===================
17-02-28 20:17:48.227 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:17:48.227 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:17:48.227 -08 000000060 INF: ===================Camera #2 Frame #143===================
17-02-28 20:17:48.247 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.374 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.379 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:17:48.379 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:17:48.379 -08 000000101 INF: ===================Camera #0 Frame #148===================
17-02-28 20:17:48.401 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:17:48.401 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:17:48.401 -08 000000060 INF: ===================Camera #2 Frame #149===================
17-02-28 20:17:48.510 -08 000000069 INF: Y Motor: Unshifted Position: 3247128
17-02-28 20:17:48.549 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:17:48.549 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:17:48.549 -08 000000101 INF: ===================Camera #0 Frame #155===================
17-02-28 20:17:48.560 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.572 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:17:48.572 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:17:48.572 -08 000000060 INF: ===================Camera #2 Frame #155===================
17-02-28 20:17:48.684 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.722 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:17:48.722 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:17:48.722 -08 000000101 INF: ===================Camera #0 Frame #161===================
17-02-28 20:17:48.743 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:17:48.743 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:17:48.743 -08 000000060 INF: ===================Camera #2 Frame #162===================
17-02-28 20:17:48.821 -08 000000069 INF: Y Motor: Unshifted Position: 3042826
17-02-28 20:17:48.871 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.892 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:17:48.892 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:17:48.892 -08 000000101 INF: ===================Camera #0 Frame #167===================
17-02-28 20:17:48.917 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:17:48.917 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:17:48.917 -08 000000060 INF: ===================Camera #2 Frame #168===================
17-02-28 20:17:48.998 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.061 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:17:49.061 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:17:49.061 -08 000000101 INF: ===================Camera #0 Frame #173===================
17-02-28 20:17:49.088 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:17:49.088 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:17:49.088 -08 000000060 INF: ===================Camera #2 Frame #174===================
17-02-28 20:17:49.134 -08 000000069 INF: Y Motor: Unshifted Position: 2836346
17-02-28 20:17:49.184 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.230 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:17:49.230 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:17:49.230 -08 000000101 INF: ===================Camera #0 Frame #180===================
17-02-28 20:17:49.259 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:17:49.259 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:17:49.259 -08 000000060 INF: ===================Camera #2 Frame #181===================
17-02-28 20:17:49.308 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.403 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:17:49.403 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:17:49.403 -08 000000101 INF: ===================Camera #0 Frame #186===================
17-02-28 20:17:49.433 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:17:49.433 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:17:49.433 -08 000000060 INF: ===================Camera #2 Frame #187===================
17-02-28 20:17:49.445 -08 000000069 INF: Y Motor: Unshifted Position: 2637004
17-02-28 20:17:49.495 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.573 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:17:49.573 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:17:49.573 -08 000000101 INF: ===================Camera #0 Frame #192===================
17-02-28 20:17:49.603 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:17:49.603 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:17:49.603 -08 000000060 INF: ===================Camera #2 Frame #193===================
17-02-28 20:17:49.622 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.743 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:17:49.743 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:17:49.743 -08 000000101 INF: ===================Camera #0 Frame #199===================
17-02-28 20:17:49.758 -08 000000069 INF: Y Motor: Unshifted Position: 2435519
17-02-28 20:17:49.774 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:17:49.774 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:17:49.774 -08 000000060 INF: ===================Camera #2 Frame #200===================
17-02-28 20:17:49.808 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.915 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:17:49.915 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:17:49.915 -08 000000101 INF: ===================Camera #0 Frame #205===================
17-02-28 20:17:49.932 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.948 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:17:49.948 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:17:49.948 -08 000000060 INF: ===================Camera #2 Frame #206===================
17-02-28 20:17:50.069 -08 000000069 INF: Y Motor: Unshifted Position: 2231200
17-02-28 20:17:50.084 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:17:50.084 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:17:50.084 -08 000000101 INF: ===================Camera #0 Frame #211===================
17-02-28 20:17:50.119 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:50.119 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:17:50.120 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:17:50.120 -08 000000060 INF: ===================Camera #2 Frame #212===================
17-02-28 20:17:50.246 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:50.254 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:17:50.254 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:17:50.254 -08 000000101 INF: ===================Camera #0 Frame #217===================
17-02-28 20:17:50.291 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:17:50.291 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:17:50.291 -08 000000060 INF: ===================Camera #2 Frame #219===================
17-02-28 20:17:50.382 -08 000000069 INF: Y Motor: Unshifted Position: 2029689
17-02-28 20:17:50.424 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:17:50.424 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:17:50.424 -08 000000101 INF: ===================Camera #0 Frame #224===================
17-02-28 20:17:50.432 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:50.465 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:17:50.465 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:17:50.465 -08 000000060 INF: ===================Camera #2 Frame #225===================
17-02-28 20:17:50.556 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:50.597 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:17:50.597 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:17:50.597 -08 000000101 INF: ===================Camera #0 Frame #230===================
17-02-28 20:17:50.636 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:17:50.636 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:17:50.636 -08 000000060 INF: ===================Camera #2 Frame #231===================
17-02-28 20:17:50.693 -08 000000069 INF: Y Motor: Unshifted Position: 1825376
17-02-28 20:17:50.743 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:50.767 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:17:50.767 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:17:50.767 -08 000000101 INF: ===================Camera #0 Frame #236===================
17-02-28 20:17:50.807 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:17:50.807 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:17:50.807 -08 000000060 INF: ===================Camera #2 Frame #238===================
17-02-28 20:17:50.870 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:50.937 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:17:50.937 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:17:50.937 -08 000000101 INF: ===================Camera #0 Frame #243===================
17-02-28 20:17:50.981 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:17:50.981 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:17:50.981 -08 000000060 INF: ===================Camera #2 Frame #244===================
17-02-28 20:17:51.006 -08 000000069 INF: Y Motor: Unshifted Position: 1623878
17-02-28 20:17:51.056 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:51.110 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:17:51.110 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:17:51.110 -08 000000101 INF: ===================Camera #0 Frame #249===================
17-02-28 20:17:51.152 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:17:51.152 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:17:51.152 -08 000000060 INF: ===================Camera #2 Frame #250===================
17-02-28 20:17:51.180 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:51.280 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:17:51.280 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:17:51.280 -08 000000101 INF: ===================Camera #0 Frame #255===================
17-02-28 20:17:51.317 -08 000000069 INF: Y Motor: Unshifted Position: 1419551
17-02-28 20:17:51.323 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:17:51.323 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:17:51.323 -08 000000060 INF: ===================Camera #2 Frame #257===================
17-02-28 20:17:51.367 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:51.450 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:17:51.450 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:17:51.450 -08 000000101 INF: ===================Camera #0 Frame #261===================
17-02-28 20:17:51.494 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:51.497 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:17:51.497 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:17:51.497 -08 000000060 INF: ===================Camera #2 Frame #263===================
17-02-28 20:17:51.620 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:17:51.620 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:17:51.620 -08 000000101 INF: ===================Camera #0 Frame #268===================
17-02-28 20:17:51.630 -08 000000069 INF: Y Motor: Unshifted Position: 1218054
17-02-28 20:17:51.668 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:17:51.668 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:17:51.668 -08 000000060 INF: ===================Camera #2 Frame #269===================
17-02-28 20:17:51.680 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:51.752 -08 000000035 INF: FPGA: Recv TDIYWAIT
17-02-28 20:17:51.752 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:51.754 -08 000000039 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:17:51.755 -08 000000072 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:17:51.755 -08 000000053 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:17:51.755 -08 000000072 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:17:51.755 -08 000000072 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:17:51.755 -08 000000072 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:17:51.755 -08 000000072 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:17:51.755 -08 000000053 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:17:51.755 -08 000000053 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:17:51.755 -08 000000053 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:17:51.756 -08 000000053 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:17:51.792 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:17:51.792 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:17:51.792 -08 000000101 INF: ===================Camera #0 Frame #272===================
17-02-28 20:17:51.805 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:51.805 -08 000000101 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:17:51.806 -08 000000101 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:51.941 -08 000000069 INF: Y Motor: Unshifted Position: 1013738
17-02-28 20:17:51.968 -08 000000101 INF: Camera #0 ReleaseBuffer
17-02-28 20:17:51.968 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:17:51.968 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:17:51.968 -08 000000060 INF: ===================Camera #2 Frame #272===================
17-02-28 20:17:51.968 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:17:51.978 -08 000000060 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:17:51.979 -08 000000060 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:51.991 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:52.002 -08 000000101 INF: ======================================
17-02-28 20:17:52.126 -08 000000036 INF: FPGA: Recv EX2MV
17-02-28 20:17:52.126 -08 000000036 INF: FPGA: Recv EX1MV
17-02-28 20:17:52.126 -08 000000053 INF: Excitation Filter 1: Moved 107 steps in 370.6753 ms
17-02-28 20:17:52.126 -08 000000053 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.7691 ms
17-02-28 20:17:52.126 -08 000000053 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.8733 ms
17-02-28 20:17:52.126 -08 000000072 INF: Excitation Filter 2: Moved 107 steps in 370.8973 ms
17-02-28 20:17:52.126 -08 000000072 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.1269 ms
17-02-28 20:17:52.126 -08 000000072 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.2383 ms
17-02-28 20:17:52.126 -08 000000053 INF: ======================================
17-02-28 20:17:52.126 -08 000000072 INF: ======================================
17-02-28 20:17:52.128 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:52.128 -08 000000069 INF: Y Motor: Unshifted Position: 982728
17-02-28 20:17:52.128 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:52.128 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:52.129 -08 000000039 INF: ======================================
17-02-28 20:17:52.175 -08 000000060 INF: Camera #2 ReleaseBuffer
17-02-28 20:17:52.175 -08 000000060 INF: ===================Camera TDI===================
17-02-28 20:17:52.194 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:17:52.194 -08 000000069 INF: Y Motor: Moved to 14.8273 after 7865 ms
17-02-28 20:17:52.194 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:52.209 -08 000000060 INF: ======================================
17-02-28 20:17:52.210 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:17:52.212 -08 000000057 INF: ======================================
17-02-28 20:17:52.253 -08 000000069 INF: Y Motor: Recv v 4097\r
17-02-28 20:17:52.253 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:52.253 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:52.315 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:17:52.315 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:52.315 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:52.380 -08 000000069 INF: Y Motor: Recv v 134217728\r
17-02-28 20:17:52.380 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:17:52.380 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:52.380 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:52.442 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:17:52.442 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:52.442 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:52.442 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:52.504 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:17:52.504 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:52.504 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:52.566 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:17:52.566 -08 000000069 INF: ======================================
17-02-28 20:17:52.567 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:52.568 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:52.569 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:52.569 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:17:52.628 -08 000000030 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:17:52.629 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:52.688 -08 000000010 INF: FPGA: Recv TDIYERD 1482730
17-02-28 20:17:52.688 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:17:52.750 -08 000000090 INF: FPGA: Recv ZADCR 16155
17-02-28 20:17:52.750 -08 000000018 INF: At scan end Y pos = 14.827 and Z pos = -0.062. Y moved -48.539 mm
17-02-28 20:17:52.750 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:17:52.816 -08 000000069 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:17:52.816 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:17:52.816 -08 000000018 INF: TDIScan finished after 11837.5527 ms
17-02-28 20:17:52.816 -08 000000018 INF: Image[0]: Y should trigger at 63.366 mm, 2nd row was at 64.275 mm (error = 0.909 mm)
17-02-28 20:17:52.816 -08 000000018 INF: Image[2]: Y should trigger at 63.366 mm, 2nd row was at 64.275 mm (error = 0.909 mm)
17-02-28 20:17:52.818 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:52.847 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.977 um
17-02-28 20:17:52.847 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:52.848 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:17:52.877 -08 000000064 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:17:52.878 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:52.879 -08 000000039 INF: ===================Dither Clean Up Command===================
17-02-28 20:17:52.879 -08 000000077 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:17:52.879 -08 000000050 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:17:52.879 -08 000000086 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:17:52.879 -08 000000077 INF: ======================================
17-02-28 20:17:52.879 -08 000000050 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:17:52.879 -08 000000050 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:17:52.880 -08 000000078 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:17:52.880 -08 000000010 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:52.880 -08 000000078 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:17:52.880 -08 000000086 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:17:52.881 -08 000000086 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:17:52.883 -08 000000010 INF: ===================LFT:Extracting coords===================
17-02-28 20:17:52.908 -08 000000010 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:52.909 -08 000000010 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:17:52.910 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:17:52.910 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:17:52.910 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:17:52.910 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:17:52.910 -08 000000066 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:52.910 -08 000000069 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:52.910 -08 000000089 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:52.911 -08 000000081 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:52.937 -08 000000038 INF: FPGA: Recv ZSEL 
17-02-28 20:17:52.937 -08 000000038 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:52.937 -08 000000078 INF: FPGA: Xmit ZDACW 17851\n
17-02-28 20:17:52.937 -08 000000086 INF: ======================================
17-02-28 20:17:52.939 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:17:52.939 -08 000000050 INF: ======================================
17-02-28 20:17:52.984 -08 000000066 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:52.984 -08 000000069 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:52.985 -08 000000089 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:52.985 -08 000000081 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:53.002 -08 000000087 INF: FPGA: Recv ZDACW 
17-02-28 20:17:53.003 -08 000000078 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:17:53.003 -08 000000078 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:17:53.064 -08 000000050 INF: FPGA: Recv TDIBB
17-02-28 20:17:53.064 -08 000000078 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:17:53.065 -08 000000078 INF: ======================================
17-02-28 20:17:53.136 -08 000000066 INF: LFT found best fwhm score 2.000201 in 152 ms
17-02-28 20:17:53.136 -08 000000066 INF: LFT found good score at index 3313 with fwhm value 2.000201. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:2,B
17-02-28 20:17:53.136 -08 000000069 INF: LFT found best fwhm score 2.000568 in 151 ms
17-02-28 20:17:53.136 -08 000000069 INF: LFT found good score at index 4497 with fwhm value 2.000568. Next cycle, cycle 4 starting Z position for bottom surface is at -0.047 mm FC:A, C:3,L:2,B
17-02-28 20:17:53.136 -08 000000089 INF: LFT found best fwhm score 2.000016 in 151 ms
17-02-28 20:17:53.136 -08 000000089 INF: LFT found good score at index 1957 with fwhm value 2.000016. Next cycle, cycle 4 starting Z position for bottom surface is at -0.047 mm FC:A, C:3,L:2,B
17-02-28 20:17:53.136 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:17:53.136 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:17:53.136 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:17:53.136 -08 000000066 INF: ======================================
17-02-28 20:17:53.136 -08 000000081 INF: LFT found best fwhm score 2.000077 in 151 ms
17-02-28 20:17:53.136 -08 000000081 INF: LFT found good score at index 4425 with fwhm value 2.000077. Next cycle, cycle 4 starting Z position for bottom surface is at -0.047 mm FC:A, C:3,L:2,B
17-02-28 20:17:53.136 -08 000000069 INF: ======================================
17-02-28 20:17:53.136 -08 000000089 INF: ======================================
17-02-28 20:17:53.137 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:17:53.137 -08 000000081 INF: ======================================
17-02-28 20:17:53.137 -08 000000010 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:53.138 -08 000000010 INF: LFT weighted average best Z for bottom surface is at -0.047mm FC:A, C:3,L:2,B
17-02-28 20:17:53.139 -08 000000010 INF: ======================================
17-02-28 20:17:53.140 -08 000000039 INF: ======================================
17-02-28 20:17:53.141 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.141 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:17:53.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:17:53.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:17:53.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:17:53.143 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.143 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494===================
17-02-28 20:17:53.143 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494===================
17-02-28 20:17:53.144 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:17:53.144 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494===================
17-02-28 20:17:53.144 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:17:53.144 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:17:53.167 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:17:53.167 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:53.167 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494===================
17-02-28 20:17:53.168 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.168 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494===================
17-02-28 20:17:53.168 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:17:53.168 -08 000000018 INF: Transformed XStagePosition from 9.440335 mm to 9.46276027336717 mm.
17-02-28 20:17:53.180 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4776957401782 mm.
17-02-28 20:17:53.180 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2776957401782 mm.
17-02-28 20:17:53.180 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3684457401782 mm.
17-02-28 20:17:53.183 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.183 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:17:53.183 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.183 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -68.1 um, section = B_1
17-02-28 20:17:53.185 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:53.185 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:53.211 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":2,"Tile":2102,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF208","HCSMMF225","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.239 -08 000000077 INF: ===================MoveEmissionFilters===================
17-02-28 20:17:53.241 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:17:53.241 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:53.242 -08 000000069 INF: ===================Move X,Y, Parallel===================
17-02-28 20:17:53.242 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:53.247 -08 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:53.248 -08 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:17:53.248 -08 000000025 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:17:53.248 -08 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:53.250 -08 000000060 INF: ===================Move X Motor without settling===================
17-02-28 20:17:53.250 -08 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:17:53.250 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:53.250 -08 000000060 INF: X Motor: Xmit PR VM\n
17-02-28 20:17:53.251 -08 000000047 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:17:53.251 -08 000000047 INF: ======================================
17-02-28 20:17:53.251 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:53.251 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:53.252 -08 000000064 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:53.253 -08 000000064 INF: Y Motor: Moving to 64.4777 mm @25.000 mm/sec, started at 14.8273 mm
17-02-28 20:17:53.253 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:53.253 -08 000000047 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:17:53.253 -08 000000064 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:53.253 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:53.253 -08 000000047 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:17:53.254 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:53.254 -08 000000047 INF: ======================================
17-02-28 20:17:53.254 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:17:53.254 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:53.254 -08 000000039 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:17:53.255 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:53.255 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:53.255 -08 000000039 INF: ======================================
17-02-28 20:17:53.256 -08 000000081 INF: ======================================
17-02-28 20:17:53.256 -08 000000051 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:53.257 -08 000000051 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:53.257 -08 000000036 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:17:53.257 -08 000000051 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:17:53.257 -08 000000030 INF: ===================Camera Arm TDI===================
17-02-28 20:17:53.257 -08 000000010 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:17:53.257 -08 000000036 INF: ======================================
17-02-28 20:17:53.257 -08 000000053 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:17:53.258 -08 000000010 INF: ======================================
17-02-28 20:17:53.258 -08 000000053 INF: ======================================
17-02-28 20:17:53.258 -08 000000030 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:53.258 -08 000000047 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:17:53.258 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:53.259 -08 000000030 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:53.259 -08 000000047 INF: ======================================
17-02-28 20:17:53.260 -08 000000085 INF: ======================================
17-02-28 20:17:53.260 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:53.263 -08 000000038 INF: ======================================
17-02-28 20:17:53.265 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":2,"Tile":2101,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF237","HCSMMF214","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.265 -08 000000052 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:17:53.266 -08 000000052 INF: ======================================
17-02-28 20:17:53.281 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:53.281 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":2,"Tile":2103,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF202","HCSMMF223","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.284 -08 000000033 INF: ======================================
17-02-28 20:17:53.286 -08 000000077 INF: ======================================
17-02-28 20:17:53.295 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":2,"Tile":2111,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF180","HCSMMF233","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.305 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":2,"Tile":2112,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF283","HCSMMF279","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.307 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":2,"Tile":2109,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF203","HCSMMF181","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.316 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":2,"Tile":2106,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF206","HCSMMF240","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.319 -08 000000077 INF: FPGA: Recv ZSEL 
17-02-28 20:17:53.320 -08 000000051 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:53.320 -08 000000051 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:17:53.321 -08 000000060 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:17:53.321 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:17:53.321 -08 000000064 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:53.321 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:53.321 -08 000000060 INF: X Motor: Xmit PR VI\n
17-02-28 20:17:53.365 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":2,"Tile":2110,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF245","HCSMMF273","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.366 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":2,"Tile":2105,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF188","HCSMMF251","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.367 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":2,"Tile":2108,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF285","HCSMMF178","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.368 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":2,"Tile":2115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF193","HCSMMF230","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.371 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":2,"Tile":2107,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF248","HCSMMF268","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.371 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":2,"Tile":2104,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF252","HCSMMF197","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.372 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":2,"Tile":2113,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF198","HCSMMF210","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.373 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":2,"Tile":2114,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF191","HCSMMF200","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.374 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":2,"Tile":2117,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF189","HCSMMF265","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.374 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":2,"Tile":2120,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF229","HCSMMF271","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.375 -08 000000035 INF: FPGA: Recv TDIBB
17-02-28 20:17:53.375 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":2,"Tile":2118,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF185","HCSMMF256","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.376 -08 000000051 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:53.376 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":2,"Tile":2122,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF287","HCSMMF269","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.377 -08 000000060 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:17:53.377 -08 000000060 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:17:53.377 -08 000000060 INF: X Motor: Moving to 9.4628 mm @15.000 mm/sec, started at 8.3628 mm
17-02-28 20:17:53.377 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":2,"Tile":2116,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF232","HCSMMF282","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.377 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:17:53.377 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:53.377 -08 000000060 INF: X Motor: Xmit MA -20290\n
17-02-28 20:17:53.378 -08 000000051 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:53.378 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":2,"Tile":2125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF211","HCSMMF254","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.378 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:53.379 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":2,"Tile":2121,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF218","HCSMMF204","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.380 -08 000000051 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:17:53.380 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":2,"Tile":2124,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF247","HCSMMF280","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.380 -08 000000051 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:17:53.380 -08 000000051 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:17:53.381 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":2,"Tile":2119,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF262","HCSMMF177","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.382 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":2,"Tile":2126,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF196","HCSMMF257","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.385 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":2,"Tile":2127,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF236","HCSMMF246","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.386 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":2,"Tile":2123,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF242","HCSMMF205","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.387 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":2,"Tile":2128,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF243","HCSMMF221","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.404 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.410 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:17:53.437 -08 000000035 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:53.437 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:53.439 -08 000000060 INF: X Motor: Recv MA -20290\r\n>
17-02-28 20:17:53.439 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:17:53.439 -08 000000064 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:53.439 -08 000000060 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:17:53.439 -08 000000064 INF: Y Motor: Set target position to 5947770 encoder counts
17-02-28 20:17:53.439 -08 000000064 INF: Y Motor: Xmit s r0xca 5947770\r
17-02-28 20:17:53.439 -08 000000051 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:17:53.439 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:53.441 -08 000000051 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:17:53.441 -08 000000051 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:17:53.441 -08 000000051 INF: Z Motor: Arming to move to -0.0281 mm
17-02-28 20:17:53.441 -08 000000051 INF: FPGA: Xmit ZYT 6427770 4\n
17-02-28 20:17:53.495 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.495 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:17:53.502 -08 000000045 INF: FPGA: Recv ZYT 
17-02-28 20:17:53.502 -08 000000051 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1482728 enc / 14.827 mm / ) = 6427770 enc / 64.278 mm
17-02-28 20:17:53.502 -08 000000051 INF: FPGA: Xmit ZARM 7366\n
17-02-28 20:17:53.503 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:17:53.503 -08 000000064 INF: Y Motor: Start the move command
17-02-28 20:17:53.503 -08 000000064 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:53.532 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.538 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:17:53.563 -08 000000101 INF: FPGA: Recv ZARM
17-02-28 20:17:53.563 -08 000000051 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.0695 ms
17-02-28 20:17:53.563 -08 000000051 INF: Z Motor: ArmAbsStepped took 121.8281 ms
17-02-28 20:17:53.563 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:53.565 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:17:53.565 -08 000000064 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:17:53.565 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:53.565 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:17:53.567 -08 000000051 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:17:53.567 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:17:53.569 -08 000000051 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:17:53.569 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:17:53.570 -08 000000051 INF: ======================================
17-02-28 20:17:53.630 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.636 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:17:53.688 -08 000000064 INF: Y Motor: Unshifted Position: 1064315
17-02-28 20:17:53.737 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.738 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:53.743 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:17:53.846 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.863 -08 000000030 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:53.863 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:53.864 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:53.864 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:53.879 -08 000000030 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:53.881 -08 000000030 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:54.002 -08 000000064 INF: Y Motor: Unshifted Position: 1766893
17-02-28 20:17:54.052 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:54.064 -08 000000060 INF: X Motor: Xmit PR ER\n
17-02-28 20:17:54.126 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:17:54.127 -08 000000060 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:17:54.127 -08 000000060 INF: X Motor: Moved to 9.4639 after 688 ms
17-02-28 20:17:54.127 -08 000000060 INF: ======================================
17-02-28 20:17:54.177 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:54.313 -08 000000064 INF: Y Motor: Unshifted Position: 2552740
17-02-28 20:17:54.363 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:54.490 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:54.509 -08 000000030 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:54.509 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:54.509 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:54.524 -08 000000030 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:54.526 -08 000000030 INF: ===================Camera Arm TDI===================
17-02-28 20:17:54.527 -08 000000030 INF: ======================================
17-02-28 20:17:54.528 -08 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:54.529 -08 000000025 INF: ======================================
17-02-28 20:17:54.632 -08 000000064 INF: Y Motor: Unshifted Position: 3332694
17-02-28 20:17:54.682 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:54.802 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:54.938 -08 000000064 INF: Y Motor: Unshifted Position: 4108594
17-02-28 20:17:54.988 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:55.112 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:55.250 -08 000000064 INF: Y Motor: Unshifted Position: 4888528
17-02-28 20:17:55.300 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:55.423 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:55.561 -08 000000064 INF: Y Motor: Unshifted Position: 5672975
17-02-28 20:17:55.611 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:55.737 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:55.872 -08 000000064 INF: Y Motor: Unshifted Position: 5947772
17-02-28 20:17:55.872 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:55.872 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:55.938 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:17:55.938 -08 000000064 INF: Y Motor: Moved to 64.4777 after 2373 ms
17-02-28 20:17:55.938 -08 000000064 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:55.998 -08 000000064 INF: Y Motor: Recv v 4096\r
17-02-28 20:17:55.998 -08 000000064 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:55.998 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:56.062 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:17:56.062 -08 000000064 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:56.062 -08 000000064 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:56.122 -08 000000064 INF: Y Motor: Recv v 402653184\r
17-02-28 20:17:56.122 -08 000000064 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:17:56.122 -08 000000064 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:56.122 -08 000000064 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:56.186 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:17:56.186 -08 000000064 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:56.186 -08 000000064 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:56.186 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:56.249 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:17:56.249 -08 000000064 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:56.249 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:56.310 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:17:56.310 -08 000000064 INF: ======================================
17-02-28 20:17:56.311 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:17:56.312 -08 000000069 INF: ======================================
17-02-28 20:17:56.314 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:56.314 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:56.315 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:17:56.315 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:17:56.373 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:56.373 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:17:56.435 -08 000000086 INF: FPGA: Recv ZFREQCL
17-02-28 20:17:56.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:17:56.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:56.436 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:56.496 -08 000000025 INF: FPGA: Recv TDIYERD 6447771
17-02-28 20:17:56.496 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447771 counts (64.478 mm)
17-02-28 20:17:56.497 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:56.497 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:56.498 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:56.498 -08 000000058 INF: ===================Set YMotor gains for scans===================
17-02-28 20:17:56.498 -08 000000058 INF: ======================================
17-02-28 20:17:56.499 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:56.499 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:17:56.499 -08 000000053 INF: FPGA: Xmit TDIYPOS 6336845\n
17-02-28 20:17:56.545 -08 000000081 INF: RunCopyService queue size at 2/28/2017 8:17:56 PM is 2
17-02-28 20:17:56.558 -08 000000064 INF: FPGA: Recv TDIYPOS
17-02-28 20:17:56.562 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:56.563 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:17:56.563 -08 000000053 INF: FPGA: Xmit TDIYARM3 139264 6427770 1 1\n
17-02-28 20:17:56.622 -08 000000050 INF: FPGA: Recv TDIYARM3
17-02-28 20:17:56.623 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:56.624 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:56.625 -08 000000053 INF: ======================================
17-02-28 20:17:56.626 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:56.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:56.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:56.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:56.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:56.629 -08 000000108 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:17:56.629 -08 000000073 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:17:56.629 -08 000000108 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:17:56.629 -08 000000108 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:17:56.629 -08 000000073 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:17:56.629 -08 000000108 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:17:56.629 -08 000000073 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:17:56.629 -08 000000073 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:17:56.629 -08 000000108 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:17:56.630 -08 000000073 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:17:57.000 -08 000000036 INF: FPGA: Recv EX1MV
17-02-28 20:17:57.000 -08 000000036 INF: FPGA: Recv EX2MV
17-02-28 20:17:57.000 -08 000000108 INF: Excitation Filter 1: Moved -107 steps in 371.241 ms
17-02-28 20:17:57.000 -08 000000073 INF: Excitation Filter 2: Moved -107 steps in 371.1626 ms
17-02-28 20:17:57.000 -08 000000073 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 371.3383 ms
17-02-28 20:17:57.000 -08 000000073 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 371.4166 ms
17-02-28 20:17:57.000 -08 000000108 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 371.3508 ms
17-02-28 20:17:57.000 -08 000000108 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 371.8333 ms
17-02-28 20:17:57.001 -08 000000073 INF: ======================================
17-02-28 20:17:57.001 -08 000000108 INF: ======================================
17-02-28 20:17:57.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:57.003 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:57.004 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:57.004 -08 000000053 INF: ===================FPGA Z Wait===================
17-02-28 20:17:57.004 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:17:57.004 -08 000000057 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:57.004 -08 000000057 INF: Y Motor: Moving to 14.8294 mm @6.500 mm/sec, started at 64.4777 mm
17-02-28 20:17:57.004 -08 000000053 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:17:57.004 -08 000000057 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:57.004 -08 000000057 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:57.004 -08 000000039 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:17:57.005 -08 000000039 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:17:57.005 -08 000000105 INF: ===================Camera TDI, Parallel===================
17-02-28 20:17:57.006 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:17:57.006 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:17:57.008 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:57.009 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:57.009 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:57.009 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:57.061 -08 000000057 INF: Y Motor: Recv ok\r
17-02-28 20:17:57.061 -08 000000057 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:57.061 -08 000000057 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:57.122 -08 000000057 INF: Y Motor: Recv ok\r
17-02-28 20:17:57.122 -08 000000057 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:57.159 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:57.159 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:57.159 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:57.159 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:57.184 -08 000000057 INF: Y Motor: Recv v 0\r
17-02-28 20:17:57.184 -08 000000057 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:57.184 -08 000000057 INF: Y Motor: Set target position to 982936 encoder counts
17-02-28 20:17:57.184 -08 000000057 INF: Y Motor: Xmit s r0xca 982936\r
17-02-28 20:17:57.248 -08 000000057 INF: Y Motor: Recv ok\r
17-02-28 20:17:57.248 -08 000000057 INF: Y Motor: Start the move command
17-02-28 20:17:57.248 -08 000000057 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:57.309 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:57.309 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:57.309 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:57.309 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:57.310 -08 000000057 INF: Y Motor: Recv ok\r
17-02-28 20:17:57.310 -08 000000057 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:17:57.310 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:57.370 -08 000000090 INF: FPGA: Recv ZWAIT 
17-02-28 20:17:57.370 -08 000000053 INF: ======================================
17-02-28 20:17:57.433 -08 000000057 INF: Y Motor: Unshifted Position: 5885912
17-02-28 20:17:57.459 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:57.459 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:57.459 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:57.459 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:57.459 -08 000000081 INF: ===================Camera #2 Frame #5===================
17-02-28 20:17:57.459 -08 000000052 INF: ===================Camera #0 Frame #5===================
17-02-28 20:17:57.483 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:57.609 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:57.624 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:57.624 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:57.624 -08 000000052 INF: ===================Camera #0 Frame #11===================
17-02-28 20:17:57.633 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:57.633 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:57.633 -08 000000081 INF: ===================Camera #2 Frame #11===================
17-02-28 20:17:57.747 -08 000000057 INF: Y Motor: Unshifted Position: 5683765
17-02-28 20:17:57.797 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:57.799 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:57.799 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:57.799 -08 000000052 INF: ===================Camera #0 Frame #17===================
17-02-28 20:17:57.809 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:17:57.809 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:17:57.809 -08 000000081 INF: ===================Camera #2 Frame #18===================
17-02-28 20:17:57.920 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:57.972 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:17:57.972 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:17:57.972 -08 000000052 INF: ===================Camera #0 Frame #24===================
17-02-28 20:17:57.981 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:17:57.981 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:17:57.981 -08 000000081 INF: ===================Camera #2 Frame #24===================
17-02-28 20:17:58.058 -08 000000057 INF: Y Motor: Unshifted Position: 5481403
17-02-28 20:17:58.108 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:58.144 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:17:58.144 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:17:58.144 -08 000000052 INF: ===================Camera #0 Frame #30===================
17-02-28 20:17:58.150 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:17:58.150 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:17:58.150 -08 000000081 INF: ===================Camera #2 Frame #30===================
17-02-28 20:17:58.234 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:58.316 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:17:58.316 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:17:58.316 -08 000000052 INF: ===================Camera #0 Frame #36===================
17-02-28 20:17:58.320 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:17:58.320 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:17:58.320 -08 000000081 INF: ===================Camera #2 Frame #36===================
17-02-28 20:17:58.370 -08 000000057 INF: Y Motor: Unshifted Position: 5278385
17-02-28 20:17:58.420 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:58.492 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:17:58.492 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:17:58.492 -08 000000052 INF: ===================Camera #0 Frame #43===================
17-02-28 20:17:58.499 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:17:58.499 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:17:58.499 -08 000000081 INF: ===================Camera #2 Frame #43===================
17-02-28 20:17:58.546 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:58.673 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:17:58.673 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:17:58.673 -08 000000052 INF: ===================Camera #0 Frame #49===================
17-02-28 20:17:58.675 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:17:58.675 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:17:58.675 -08 000000081 INF: ===================Camera #2 Frame #50===================
17-02-28 20:17:58.681 -08 000000057 INF: Y Motor: Unshifted Position: 5074286
17-02-28 20:17:58.731 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:58.847 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:17:58.847 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:17:58.847 -08 000000052 INF: ===================Camera #0 Frame #56===================
17-02-28 20:17:58.850 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:17:58.850 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:17:58.850 -08 000000081 INF: ===================Camera #2 Frame #56===================
17-02-28 20:17:58.857 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:58.995 -08 000000057 INF: Y Motor: Unshifted Position: 4872136
17-02-28 20:17:59.021 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:17:59.021 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:17:59.021 -08 000000081 INF: ===================Camera #2 Frame #62===================
17-02-28 20:17:59.025 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:17:59.025 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:17:59.025 -08 000000052 INF: ===================Camera #0 Frame #62===================
17-02-28 20:17:59.045 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:59.168 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:59.199 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:17:59.199 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:17:59.199 -08 000000081 INF: ===================Camera #2 Frame #69===================
17-02-28 20:17:59.202 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:17:59.202 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:17:59.202 -08 000000052 INF: ===================Camera #0 Frame #69===================
17-02-28 20:17:59.307 -08 000000057 INF: Y Motor: Unshifted Position: 4669119
17-02-28 20:17:59.357 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:59.382 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:17:59.382 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:17:59.382 -08 000000081 INF: ===================Camera #2 Frame #76===================
17-02-28 20:17:59.383 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:17:59.383 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:17:59.383 -08 000000052 INF: ===================Camera #0 Frame #76===================
17-02-28 20:17:59.480 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:59.554 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:17:59.554 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:17:59.554 -08 000000052 INF: ===================Camera #0 Frame #82===================
17-02-28 20:17:59.565 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:17:59.565 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:17:59.565 -08 000000081 INF: ===================Camera #2 Frame #82===================
17-02-28 20:17:59.618 -08 000000057 INF: Y Motor: Unshifted Position: 4466955
17-02-28 20:17:59.668 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:59.722 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:17:59.722 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:17:59.722 -08 000000052 INF: ===================Camera #0 Frame #88===================
17-02-28 20:17:59.735 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:17:59.735 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:17:59.735 -08 000000081 INF: ===================Camera #2 Frame #89===================
17-02-28 20:17:59.794 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:59.891 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:17:59.891 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:17:59.891 -08 000000052 INF: ===================Camera #0 Frame #94===================
17-02-28 20:17:59.907 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:17:59.907 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:17:59.907 -08 000000081 INF: ===================Camera #2 Frame #95===================
17-02-28 20:17:59.929 -08 000000057 INF: Y Motor: Unshifted Position: 4262644
17-02-28 20:17:59.979 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.060 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:18:00.060 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:18:00.060 -08 000000052 INF: ===================Camera #0 Frame #101===================
17-02-28 20:18:00.077 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:18:00.077 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:18:00.077 -08 000000081 INF: ===================Camera #2 Frame #101===================
17-02-28 20:18:00.105 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.232 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:18:00.232 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:18:00.232 -08 000000052 INF: ===================Camera #0 Frame #107===================
17-02-28 20:18:00.243 -08 000000057 INF: Y Motor: Unshifted Position: 4059187
17-02-28 20:18:00.247 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:18:00.247 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:18:00.247 -08 000000081 INF: ===================Camera #2 Frame #107===================
17-02-28 20:18:00.293 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.402 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:18:00.402 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:18:00.402 -08 000000052 INF: ===================Camera #0 Frame #113===================
17-02-28 20:18:00.416 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.416 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:18:00.416 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:18:00.416 -08 000000081 INF: ===================Camera #2 Frame #114===================
17-02-28 20:18:00.554 -08 000000057 INF: Y Motor: Unshifted Position: 3858122
17-02-28 20:18:00.573 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:18:00.573 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:18:00.573 -08 000000052 INF: ===================Camera #0 Frame #119===================
17-02-28 20:18:00.589 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:18:00.589 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:18:00.589 -08 000000081 INF: ===================Camera #2 Frame #120===================
17-02-28 20:18:00.604 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.730 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.744 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:18:00.744 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:18:00.744 -08 000000052 INF: ===================Camera #0 Frame #126===================
17-02-28 20:18:00.759 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:18:00.759 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:18:00.759 -08 000000081 INF: ===================Camera #2 Frame #126===================
17-02-28 20:18:00.865 -08 000000057 INF: Y Motor: Unshifted Position: 3654022
17-02-28 20:18:00.915 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.918 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:18:00.918 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:18:00.918 -08 000000052 INF: ===================Camera #0 Frame #132===================
17-02-28 20:18:00.929 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:18:00.929 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:18:00.929 -08 000000081 INF: ===================Camera #2 Frame #133===================
17-02-28 20:18:01.041 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:01.090 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:18:01.090 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:18:01.090 -08 000000052 INF: ===================Camera #0 Frame #138===================
17-02-28 20:18:01.102 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:18:01.102 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:18:01.102 -08 000000081 INF: ===================Camera #2 Frame #139===================
17-02-28 20:18:01.179 -08 000000057 INF: Y Motor: Unshifted Position: 3451648
17-02-28 20:18:01.229 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:01.261 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:18:01.261 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:18:01.261 -08 000000052 INF: ===================Camera #0 Frame #145===================
17-02-28 20:18:01.271 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:18:01.271 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:18:01.271 -08 000000081 INF: ===================Camera #2 Frame #145===================
17-02-28 20:18:01.353 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:01.432 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:18:01.432 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:18:01.432 -08 000000052 INF: ===================Camera #0 Frame #151===================
17-02-28 20:18:01.440 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:18:01.440 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:18:01.440 -08 000000081 INF: ===================Camera #2 Frame #151===================
17-02-28 20:18:01.492 -08 000000057 INF: Y Motor: Unshifted Position: 3248857
17-02-28 20:18:01.542 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:01.602 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:18:01.602 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:18:01.602 -08 000000052 INF: ===================Camera #0 Frame #157===================
17-02-28 20:18:01.609 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:18:01.609 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:18:01.609 -08 000000081 INF: ===================Camera #2 Frame #158===================
17-02-28 20:18:01.664 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:01.772 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:18:01.772 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:18:01.772 -08 000000052 INF: ===================Camera #0 Frame #164===================
17-02-28 20:18:01.781 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:18:01.781 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:18:01.781 -08 000000081 INF: ===================Camera #2 Frame #164===================
17-02-28 20:18:01.802 -08 000000057 INF: Y Motor: Unshifted Position: 3045845
17-02-28 20:18:01.852 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:01.945 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:18:01.945 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:18:01.945 -08 000000052 INF: ===================Camera #0 Frame #170===================
17-02-28 20:18:01.950 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:18:01.950 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:18:01.950 -08 000000081 INF: ===================Camera #2 Frame #170===================
17-02-28 20:18:01.975 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.115 -08 000000057 INF: Y Motor: Unshifted Position: 2842400
17-02-28 20:18:02.115 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:18:02.115 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:18:02.115 -08 000000052 INF: ===================Camera #0 Frame #176===================
17-02-28 20:18:02.119 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:18:02.119 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:18:02.119 -08 000000081 INF: ===================Camera #2 Frame #176===================
17-02-28 20:18:02.165 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.283 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:18:02.283 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:18:02.283 -08 000000052 INF: ===================Camera #0 Frame #182===================
17-02-28 20:18:02.288 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:18:02.288 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:18:02.288 -08 000000081 INF: ===================Camera #2 Frame #183===================
17-02-28 20:18:02.289 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.426 -08 000000057 INF: Y Motor: Unshifted Position: 2640680
17-02-28 20:18:02.451 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:18:02.451 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:18:02.451 -08 000000052 INF: ===================Camera #0 Frame #189===================
17-02-28 20:18:02.464 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:18:02.464 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:18:02.464 -08 000000081 INF: ===================Camera #2 Frame #189===================
17-02-28 20:18:02.476 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.599 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.622 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:18:02.622 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:18:02.622 -08 000000052 INF: ===================Camera #0 Frame #195===================
17-02-28 20:18:02.636 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:18:02.636 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:18:02.636 -08 000000081 INF: ===================Camera #2 Frame #195===================
17-02-28 20:18:02.737 -08 000000057 INF: Y Motor: Unshifted Position: 2436590
17-02-28 20:18:02.787 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.792 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:18:02.792 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:18:02.792 -08 000000052 INF: ===================Camera #0 Frame #201===================
17-02-28 20:18:02.805 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:18:02.805 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:18:02.805 -08 000000081 INF: ===================Camera #2 Frame #202===================
17-02-28 20:18:02.913 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.962 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:18:02.962 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:18:02.962 -08 000000052 INF: ===================Camera #0 Frame #207===================
17-02-28 20:18:02.977 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:18:02.977 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:18:02.977 -08 000000081 INF: ===================Camera #2 Frame #208===================
17-02-28 20:18:03.051 -08 000000057 INF: Y Motor: Unshifted Position: 2234220
17-02-28 20:18:03.101 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:03.132 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:18:03.132 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:18:03.132 -08 000000052 INF: ===================Camera #0 Frame #214===================
17-02-28 20:18:03.146 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:18:03.146 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:18:03.146 -08 000000081 INF: ===================Camera #2 Frame #214===================
17-02-28 20:18:03.224 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:03.305 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:18:03.305 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:18:03.305 -08 000000052 INF: ===================Camera #0 Frame #220===================
17-02-28 20:18:03.314 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:18:03.314 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:18:03.314 -08 000000081 INF: ===================Camera #2 Frame #220===================
17-02-28 20:18:03.362 -08 000000057 INF: Y Motor: Unshifted Position: 2031851
17-02-28 20:18:03.412 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:03.475 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:18:03.475 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:18:03.475 -08 000000052 INF: ===================Camera #0 Frame #226===================
17-02-28 20:18:03.483 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:18:03.483 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:18:03.483 -08 000000081 INF: ===================Camera #2 Frame #227===================
17-02-28 20:18:03.535 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:03.645 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:18:03.645 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:18:03.646 -08 000000052 INF: ===================Camera #0 Frame #233===================
17-02-28 20:18:03.655 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:18:03.655 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:18:03.655 -08 000000081 INF: ===================Camera #2 Frame #233===================
17-02-28 20:18:03.673 -08 000000057 INF: Y Motor: Unshifted Position: 1827743
17-02-28 20:18:03.723 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:03.819 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:18:03.819 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:18:03.819 -08 000000052 INF: ===================Camera #0 Frame #239===================
17-02-28 20:18:03.824 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:18:03.824 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:18:03.824 -08 000000081 INF: ===================Camera #2 Frame #239===================
17-02-28 20:18:03.849 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:03.987 -08 000000057 INF: Y Motor: Unshifted Position: 1625600
17-02-28 20:18:03.989 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:18:03.989 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:18:03.989 -08 000000052 INF: ===================Camera #0 Frame #245===================
17-02-28 20:18:03.993 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:18:03.993 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:18:03.993 -08 000000081 INF: ===================Camera #2 Frame #245===================
17-02-28 20:18:04.037 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:04.159 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:18:04.159 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:18:04.159 -08 000000052 INF: ===================Camera #0 Frame #251===================
17-02-28 20:18:04.161 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:04.162 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:18:04.162 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:18:04.162 -08 000000081 INF: ===================Camera #2 Frame #252===================
17-02-28 20:18:04.299 -08 000000057 INF: Y Motor: Unshifted Position: 1423228
17-02-28 20:18:04.331 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:18:04.331 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:18:04.331 -08 000000052 INF: ===================Camera #0 Frame #258===================
17-02-28 20:18:04.334 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:18:04.334 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:18:04.334 -08 000000081 INF: ===================Camera #2 Frame #258===================
17-02-28 20:18:04.349 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:04.472 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:04.503 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:18:04.503 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:18:04.503 -08 000000081 INF: ===================Camera #2 Frame #264===================
17-02-28 20:18:04.504 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:18:04.504 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:18:04.504 -08 000000052 INF: ===================Camera #0 Frame #264===================
17-02-28 20:18:04.610 -08 000000057 INF: Y Motor: Unshifted Position: 1220209
17-02-28 20:18:04.660 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:04.672 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:18:04.672 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:18:04.672 -08 000000081 INF: ===================Camera #2 Frame #270===================
17-02-28 20:18:04.675 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:18:04.675 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:18:04.675 -08 000000052 INF: ===================Camera #0 Frame #270===================
17-02-28 20:18:04.731 -08 000000073 INF: FPGA: Recv TDIYWAIT
17-02-28 20:18:04.731 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:04.733 -08 000000039 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:18:04.734 -08 000000082 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:18:04.734 -08 000000050 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:18:04.734 -08 000000082 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:18:04.734 -08 000000082 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:18:04.734 -08 000000082 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:18:04.734 -08 000000050 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:18:04.734 -08 000000082 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:18:04.734 -08 000000050 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:18:04.734 -08 000000050 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:18:04.735 -08 000000050 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:18:04.783 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:04.842 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:18:04.842 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:18:04.842 -08 000000081 INF: ===================Camera #2 Frame #272===================
17-02-28 20:18:04.846 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:18:04.846 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:18:04.846 -08 000000052 INF: ===================Camera #0 Frame #272===================
17-02-28 20:18:04.849 -08 000000081 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:18:04.849 -08 000000081 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:04.853 -08 000000052 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:18:04.854 -08 000000052 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:04.921 -08 000000057 INF: Y Motor: Unshifted Position: 1016108
17-02-28 20:18:04.971 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:05.014 -08 000000081 INF: Camera #2 ReleaseBuffer
17-02-28 20:18:05.014 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:18:05.051 -08 000000081 INF: ======================================
17-02-28 20:18:05.107 -08 000000064 INF: FPGA: Recv EX2MV
17-02-28 20:18:05.107 -08 000000064 INF: FPGA: Recv EX1MV
17-02-28 20:18:05.107 -08 000000050 INF: Excitation Filter 1: Moved 107 steps in 372.7201 ms
17-02-28 20:18:05.107 -08 000000082 INF: Excitation Filter 2: Moved 107 steps in 372.9411 ms
17-02-28 20:18:05.107 -08 000000050 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.8886 ms
17-02-28 20:18:05.107 -08 000000082 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.0482 ms
17-02-28 20:18:05.107 -08 000000082 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.1798 ms
17-02-28 20:18:05.107 -08 000000050 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.0027 ms
17-02-28 20:18:05.107 -08 000000082 INF: ======================================
17-02-28 20:18:05.108 -08 000000050 INF: ======================================
17-02-28 20:18:05.109 -08 000000057 INF: Y Motor: Unshifted Position: 982935
17-02-28 20:18:05.109 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:05.109 -08 000000057 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:05.109 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:05.110 -08 000000039 INF: ======================================
17-02-28 20:18:05.146 -08 000000052 INF: Camera #0 ReleaseBuffer
17-02-28 20:18:05.146 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:18:05.171 -08 000000057 INF: Y Motor: Recv v 0\r
17-02-28 20:18:05.171 -08 000000057 INF: Y Motor: Moved to 14.8294 after 7861 ms
17-02-28 20:18:05.171 -08 000000057 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:05.177 -08 000000052 INF: ======================================
17-02-28 20:18:05.178 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:18:05.179 -08 000000105 INF: ======================================
17-02-28 20:18:05.235 -08 000000057 INF: Y Motor: Recv v 4097\r
17-02-28 20:18:05.235 -08 000000057 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:05.235 -08 000000057 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:05.295 -08 000000057 INF: Y Motor: Recv v 0\r
17-02-28 20:18:05.295 -08 000000057 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:05.295 -08 000000057 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:05.360 -08 000000057 INF: Y Motor: Recv v 134217728\r
17-02-28 20:18:05.360 -08 000000057 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:18:05.360 -08 000000057 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:05.360 -08 000000057 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:05.421 -08 000000057 INF: Y Motor: Recv v 0\r
17-02-28 20:18:05.421 -08 000000057 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:05.421 -08 000000057 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:05.421 -08 000000057 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:05.483 -08 000000057 INF: Y Motor: Recv ok\r
17-02-28 20:18:05.483 -08 000000057 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:05.483 -08 000000057 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:05.547 -08 000000057 INF: Y Motor: Recv ok\r
17-02-28 20:18:05.547 -08 000000057 INF: ======================================
17-02-28 20:18:05.548 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:05.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:05.550 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:05.550 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:18:05.609 -08 000000025 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:18:05.610 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:05.668 -08 000000087 INF: FPGA: Recv TDIYERD 1482937
17-02-28 20:18:05.668 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:18:05.730 -08 000000053 INF: FPGA: Recv ZADCR 16265
17-02-28 20:18:05.730 -08 000000018 INF: At scan end Y pos = 14.829 and Z pos = -0.063. Y moved -48.539 mm
17-02-28 20:18:05.730 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:18:05.792 -08 000000081 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:18:05.792 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:18:05.792 -08 000000018 INF: TDIScan finished after 12623.3801 ms
17-02-28 20:18:05.792 -08 000000018 INF: Image[0]: Y should trigger at 63.368 mm, 2nd row was at 64.277 mm (error = 0.909 mm)
17-02-28 20:18:05.792 -08 000000018 INF: Image[2]: Y should trigger at 63.368 mm, 2nd row was at 64.277 mm (error = 0.909 mm)
17-02-28 20:18:05.804 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:05.836 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.722 um
17-02-28 20:18:05.836 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:05.837 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:18:05.856 -08 000000075 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:18:05.856 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:05.857 -08 000000082 INF: ===================Dither Clean Up Command===================
17-02-28 20:18:05.857 -08 000000087 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:18:05.857 -08 000000050 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:18:05.857 -08 000000010 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:18:05.857 -08 000000010 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:18:05.858 -08 000000010 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:18:05.858 -08 000000072 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:18:05.858 -08 000000064 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:05.858 -08 000000050 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:05.858 -08 000000050 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:05.858 -08 000000087 INF: ======================================
17-02-28 20:18:05.859 -08 000000072 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:18:05.861 -08 000000064 INF: ===================LFT:Extracting coords===================
17-02-28 20:18:05.886 -08 000000064 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:05.887 -08 000000064 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:18:05.888 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:18:05.888 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:18:05.888 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:18:05.888 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:18:05.888 -08 000000038 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:05.888 -08 000000057 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:05.888 -08 000000081 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:05.889 -08 000000105 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:05.918 -08 000000060 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:05.918 -08 000000060 INF: FPGA: Recv ZSEL 
17-02-28 20:18:05.918 -08 000000072 INF: FPGA: Xmit ZDACW 17851\n
17-02-28 20:18:05.918 -08 000000010 INF: ======================================
17-02-28 20:18:05.920 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:18:05.920 -08 000000050 INF: ======================================
17-02-28 20:18:05.964 -08 000000038 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:05.964 -08 000000057 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:05.964 -08 000000105 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:05.974 -08 000000081 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:05.979 -08 000000073 INF: FPGA: Recv ZDACW 
17-02-28 20:18:05.979 -08 000000072 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:18:05.980 -08 000000072 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:18:06.044 -08 000000010 INF: FPGA: Recv TDIBB
17-02-28 20:18:06.044 -08 000000072 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:18:06.045 -08 000000072 INF: ======================================
17-02-28 20:18:06.116 -08 000000038 INF: LFT found best fwhm score 3.402823E+38 in 152 ms
17-02-28 20:18:06.116 -08 000000057 INF: LFT found best fwhm score 2.001091 in 152 ms
17-02-28 20:18:06.116 -08 000000038 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0473133401883855 in the next cycle, cycle 4 FC:A, C:3,L:2,B
17-02-28 20:18:06.116 -08 000000057 INF: LFT found good score at index 217 with fwhm value 2.001091. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:2,B
17-02-28 20:18:06.116 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:18:06.116 -08 000000105 INF: LFT found best fwhm score 2.000179 in 152 ms
17-02-28 20:18:06.116 -08 000000105 INF: LFT found good score at index 1201 with fwhm value 2.000179. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:2,B
17-02-28 20:18:06.116 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:18:06.116 -08 000000057 INF: ======================================
17-02-28 20:18:06.116 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:18:06.117 -08 000000038 INF: ======================================
17-02-28 20:18:06.117 -08 000000105 INF: ======================================
17-02-28 20:18:06.142 -08 000000081 INF: LFT found best fwhm score 2.000525 in 168 ms
17-02-28 20:18:06.142 -08 000000081 INF: LFT found good score at index 1669 with fwhm value 2.000525. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:2,B
17-02-28 20:18:06.142 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:18:06.143 -08 000000081 INF: ======================================
17-02-28 20:18:06.144 -08 000000064 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:06.145 -08 000000064 INF: LFT weighted average best Z for bottom surface is at -0.048mm FC:A, C:3,L:2,B
17-02-28 20:18:06.145 -08 000000064 INF: ======================================
17-02-28 20:18:06.146 -08 000000082 INF: ======================================
17-02-28 20:18:06.147 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:06.148 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:18:06.148 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:06.148 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:18:06.148 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:06.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:18:06.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:06.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:18:06.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:06.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494===================
17-02-28 20:18:06.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494===================
17-02-28 20:18:06.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:18:06.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494===================
17-02-28 20:18:06.150 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:18:06.151 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:18:06.173 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:18:06.174 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:18:06.174 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.174 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:18:06.174 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:18:06.175 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:18:06.195 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:18:06.224 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.226 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.227 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:06.227 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:06.234 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":2,"Tile":2201,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF244","HCSMMF242","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.271 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:06.273 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.274 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:18:06.274 -08 000000018 INF: Lane 3, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:18:06.275 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.279 -08 000000052 INF: ===================Move Tilt Motor 1===================
17-02-28 20:18:06.279 -08 000000052 INF: ======================================
17-02-28 20:18:06.280 -08 000000090 INF: ===================Move Tilt Motor 2===================
17-02-28 20:18:06.280 -08 000000090 INF: ======================================
17-02-28 20:18:06.281 -08 000000052 INF: ===================Move Tilt Motor 3===================
17-02-28 20:18:06.281 -08 000000052 INF: ======================================
17-02-28 20:18:06.282 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.400 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":2,"Tile":2203,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF196","HCSMMF217","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.400 -08 000000018 INF: Transformed XStagePosition from 11.66893 mm to 11.6689300537109 mm.
17-02-28 20:18:06.403 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":2,"Tile":2205,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF284","HCSMMF275","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.406 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":2,"Tile":2206,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF176","HCSMMF249","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.408 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":2,"Tile":2204,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF194","HCSMMF268","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.417 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":2,"Tile":2208,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF221","HCSMMF195","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.418 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:18:06.418 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:18:06.418 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:18:06.419 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":2,"Tile":2210,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF197","HCSMMF272","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.420 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:06.420 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":2,"Tile":2211,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF207","HCSMMF262","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.421 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:06.422 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":2,"Tile":2212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF260","HCSMMF198","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.424 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":2,"Tile":2202,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF205","HCSMMF215","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.428 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:18:06.429 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:18:06.429 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:18:06.451 -08 000000082 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:06.453 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:06.453 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:18:06.453 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0681 mm
17-02-28 20:18:06.454 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:18:06.474 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":2,"Tile":2207,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF271","HCSMMF240","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.475 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":2,"Tile":2213,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF282","HCSMMF178","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.476 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":2,"Tile":2209,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF273","HCSMMF248","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.477 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":2,"Tile":2214,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF192","HCSMMF210","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.477 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":2,"Tile":2218,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF184","HCSMMF188","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.478 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":2,"Tile":2216,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF228","HCSMMF213","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.479 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":2,"Tile":2217,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF264","HCSMMF227","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.480 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":2,"Tile":2219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF279","HCSMMF266","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.481 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":2,"Tile":2223,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF216","HCSMMF189","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.482 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":2,"Tile":2222,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF261","HCSMMF270","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.488 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":2,"Tile":2226,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF254","HCSMMF237","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.489 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":2,"Tile":2224,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF185","HCSMMF234","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.490 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":2,"Tile":2225,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF186","HCSMMF182","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.491 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":2,"Tile":2215,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF287","HCSMMF212","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.492 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":2,"Tile":2227,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF219","HCSMMF201","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.493 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":2,"Tile":2228,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF256","HCSMMF231","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.494 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":2,"Tile":2220,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF269","HCSMMF286","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.496 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":2,"Tile":2221,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF274","HCSMMF280","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.504 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.510 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:18:06.513 -08 000000051 INF: FPGA: Recv ZTRG 
17-02-28 20:18:06.513 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:18:06.575 -08 000000081 INF: FPGA: Recv ZYT 
17-02-28 20:18:06.575 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:18:06.575 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:18:06.599 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.600 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:18:06.637 -08 000000036 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:18:06.637 -08 000000036 INF: FPGA: Recv ZMV 
17-02-28 20:18:06.637 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:18:06.637 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9283 ms
17-02-28 20:18:06.637 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:18:06.638 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.644 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:18:06.699 -08 000000105 INF: FPGA: Recv ZDACR 60292
17-02-28 20:18:06.699 -08 000000018 INF: Z Motor: MoveAndTrigger took 245.8071 ms w/comms
17-02-28 20:18:06.699 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:18:06.699 -08 000000018 INF: Z Motor: MoveAbsStepped took 245.9998 ms
17-02-28 20:18:06.700 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:06.700 -08 000000018 INF: Transformed XStagePosition from 11.66893 mm to 11.6689300537109 mm.
17-02-28 20:18:06.709 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:18:06.709 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:06.709 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:06.709 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:18:06.709 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:18:06.741 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.746 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:18:06.761 -08 000000058 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:06.782 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:06.782 -08 000000018 INF: Transformed XStagePosition from 11.66893 mm to 11.6689300537109 mm.
17-02-28 20:18:06.790 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:18:06.790 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:06.790 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:06.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:06.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:18:06.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:06.793 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = C_1
17-02-28 20:18:06.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:06.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:06.795 -08 000000057 INF: ===================Move X,Y===================
17-02-28 20:18:06.795 -08 000000035 INF: ===================MoveEmissionFilters===================
17-02-28 20:18:06.796 -08 000000057 INF: ===================Move X,Y, Parallel===================
17-02-28 20:18:06.796 -08 000000089 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:06.796 -08 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:06.796 -08 000000109 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:06.796 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:06.797 -08 000000087 INF: ===================Move X Motor without settling===================
17-02-28 20:18:06.797 -08 000000073 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:06.797 -08 000000087 INF: X Motor: Xmit PR VM\n
17-02-28 20:18:06.797 -08 000000089 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:06.797 -08 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:06.797 -08 000000109 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:06.797 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:06.798 -08 000000073 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8294 mm
17-02-28 20:18:06.798 -08 000000081 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:18:06.798 -08 000000073 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:06.798 -08 000000053 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:18:06.798 -08 000000077 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:18:06.798 -08 000000073 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:06.798 -08 000000060 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:18:06.798 -08 000000053 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:18:06.798 -08 000000034 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:18:06.798 -08 000000038 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:18:06.799 -08 000000034 INF: ======================================
17-02-28 20:18:06.799 -08 000000053 INF: ======================================
17-02-28 20:18:06.799 -08 000000025 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:18:06.799 -08 000000090 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:18:06.799 -08 000000038 INF: ======================================
17-02-28 20:18:06.799 -08 000000090 INF: ======================================
17-02-28 20:18:06.799 -08 000000060 INF: ======================================
17-02-28 20:18:06.800 -08 000000025 INF: ======================================
17-02-28 20:18:06.801 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:06.801 -08 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:06.801 -08 000000077 INF: ======================================
17-02-28 20:18:06.801 -08 000000081 INF: ======================================
17-02-28 20:18:06.802 -08 000000047 INF: ======================================
17-02-28 20:18:06.802 -08 000000086 INF: ======================================
17-02-28 20:18:06.803 -08 000000109 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:06.803 -08 000000089 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:06.804 -08 000000109 INF: ======================================
17-02-28 20:18:06.804 -08 000000089 INF: ======================================
17-02-28 20:18:06.805 -08 000000035 INF: ======================================
17-02-28 20:18:06.833 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.838 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:18:06.887 -08 000000087 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:18:06.887 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:18:06.887 -08 000000073 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:06.887 -08 000000073 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:06.887 -08 000000087 INF: X Motor: Xmit PR VI\n
17-02-28 20:18:06.931 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.952 -08 000000087 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:18:06.952 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:18:06.952 -08 000000087 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:18:06.952 -08 000000073 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:06.952 -08 000000087 INF: X Motor: Moving to 11.6689 mm @15.000 mm/sec, started at 9.4639 mm
17-02-28 20:18:06.952 -08 000000087 INF: X Motor: Xmit MA -19387\n
17-02-28 20:18:07.015 -08 000000087 INF: X Motor: Recv MA -19387\r\n>
17-02-28 20:18:07.015 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:18:07.015 -08 000000073 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:07.015 -08 000000087 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:18:07.015 -08 000000073 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:18:07.015 -08 000000073 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:18:07.076 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:18:07.076 -08 000000073 INF: Y Motor: Start the move command
17-02-28 20:18:07.076 -08 000000073 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:07.139 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:18:07.139 -08 000000073 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:18:07.139 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:07.252 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:18:07.263 -08 000000073 INF: Y Motor: Unshifted Position: 1065715
17-02-28 20:18:07.313 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:07.437 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:07.575 -08 000000073 INF: Y Motor: Unshifted Position: 1767105
17-02-28 20:18:07.625 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:07.636 -08 000000087 INF: X Motor: Xmit PR ER\n
17-02-28 20:18:07.698 -08 000000087 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:18:07.698 -08 000000087 INF: X Motor: Moved to 11.6685 after 683 ms
17-02-28 20:18:07.698 -08 000000087 INF: ======================================
17-02-28 20:18:07.748 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:07.889 -08 000000073 INF: Y Motor: Unshifted Position: 2552948
17-02-28 20:18:07.939 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.061 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.197 -08 000000073 INF: Y Motor: Unshifted Position: 3332896
17-02-28 20:18:08.247 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.373 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.509 -08 000000073 INF: Y Motor: Unshifted Position: 4108801
17-02-28 20:18:08.559 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.684 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.826 -08 000000073 INF: Y Motor: Unshifted Position: 4894569
17-02-28 20:18:08.876 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.997 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:09.133 -08 000000073 INF: Y Motor: Unshifted Position: 5668426
17-02-28 20:18:09.183 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:09.316 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:09.445 -08 000000073 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:18:09.445 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:09.445 -08 000000073 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:09.512 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:18:09.512 -08 000000073 INF: Y Motor: Moved to 64.4706 after 2373 ms
17-02-28 20:18:09.512 -08 000000073 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:09.570 -08 000000073 INF: Y Motor: Recv v 4096\r
17-02-28 20:18:09.570 -08 000000073 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:09.570 -08 000000073 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:09.635 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:18:09.635 -08 000000073 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:09.635 -08 000000073 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:09.699 -08 000000073 INF: Y Motor: Recv v 402653184\r
17-02-28 20:18:09.699 -08 000000073 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:18:09.699 -08 000000073 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:09.699 -08 000000073 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:09.761 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:18:09.761 -08 000000073 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:09.761 -08 000000073 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:09.761 -08 000000073 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:09.821 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:18:09.821 -08 000000073 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:09.821 -08 000000073 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:09.883 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:18:09.883 -08 000000073 INF: ======================================
17-02-28 20:18:09.884 -08 000000057 INF: ===================Move X,Y===================
17-02-28 20:18:09.885 -08 000000057 INF: ======================================
17-02-28 20:18:09.886 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:09.887 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:09.887 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:18:09.888 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:18:09.945 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:09.945 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:18:10.007 -08 000000087 INF: FPGA: Recv ZFREQCL
17-02-28 20:18:10.008 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:18:10.008 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:10.008 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:10.067 -08 000000081 INF: FPGA: Recv TDIYERD 6447056
17-02-28 20:18:10.067 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447056 counts (64.471 mm)
17-02-28 20:18:10.068 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:10.068 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:10.069 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:18:10.069 -08 000000058 INF: ===================Set YMotor gains for scans===================
17-02-28 20:18:10.070 -08 000000045 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:18:10.070 -08 000000058 INF: ======================================
17-02-28 20:18:10.070 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:18:10.072 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:18:10.072 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:18:10.072 -08 000000045 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:18:10.133 -08 000000101 INF: FPGA: Recv TDIYPOS
17-02-28 20:18:10.133 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:18:10.135 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:18:10.135 -08 000000045 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:18:10.192 -08 000000047 INF: FPGA: Recv TDIYARM2
17-02-28 20:18:10.192 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:18:10.194 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:18:10.195 -08 000000045 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:18:10.195 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:18:10.197 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:18:10.198 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:18:10.198 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:10.565 -08 000000045 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:18:10.565 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:18:10.565 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:10.582 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:18:10.584 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:10.965 -08 000000045 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:18:10.965 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:18:10.965 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:10.980 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:18:10.983 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:18:10.985 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:18:10.987 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:10.988 -08 000000045 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:18:10.989 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:10.991 -08 000000045 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:18:10.991 -08 000000045 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:18:10.991 -08 000000045 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:18:10.991 -08 000000045 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:18:11.069 -08 000000105 INF: FPGA: Recv ZYT 
17-02-28 20:18:11.069 -08 000000045 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:18:11.069 -08 000000045 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:18:11.128 -08 000000052 INF: FPGA: Recv ZARM
17-02-28 20:18:11.128 -08 000000045 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 58.8512 ms
17-02-28 20:18:11.128 -08 000000045 INF: Z Motor: ArmAbsStepped took 136.5872 ms
17-02-28 20:18:11.128 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:11.130 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:18:11.131 -08 000000045 INF: ======================================
17-02-28 20:18:11.132 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:11.133 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:11.133 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:11.133 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:11.134 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:11.135 -08 000000078 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:18:11.135 -08 000000047 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:18:11.135 -08 000000078 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:18:11.135 -08 000000078 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:18:11.135 -08 000000078 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:18:11.135 -08 000000047 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:18:11.135 -08 000000047 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:18:11.135 -08 000000047 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:18:11.135 -08 000000078 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:18:11.136 -08 000000047 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:18:11.503 -08 000000077 INF: FPGA: Recv EX2MV
17-02-28 20:18:11.503 -08 000000077 INF: FPGA: Recv EX1MV
17-02-28 20:18:11.503 -08 000000047 INF: Excitation Filter 1: Moved -107 steps in 368.0654 ms
17-02-28 20:18:11.503 -08 000000078 INF: Excitation Filter 2: Moved -107 steps in 368.2308 ms
17-02-28 20:18:11.503 -08 000000047 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.2685 ms
17-02-28 20:18:11.503 -08 000000047 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.4517 ms
17-02-28 20:18:11.504 -08 000000078 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.4445 ms
17-02-28 20:18:11.504 -08 000000078 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.6889 ms
17-02-28 20:18:11.504 -08 000000078 INF: ======================================
17-02-28 20:18:11.504 -08 000000047 INF: ======================================
17-02-28 20:18:11.505 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:11.507 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:11.507 -08 000000069 INF: ===================Serial===================
17-02-28 20:18:11.507 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:18:11.508 -08 000000010 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:11.508 -08 000000010 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:18:11.508 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:11.508 -08 000000010 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:11.508 -08 000000010 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:11.508 -08 000000069 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:18:11.508 -08 000000081 INF: ===================Camera TDI, Parallel===================
17-02-28 20:18:11.508 -08 000000069 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:18:11.509 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:18:11.509 -08 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:18:11.509 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:18:11.510 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.510 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.511 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.511 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.513 -08 000000085 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:18:11.567 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:18:11.567 -08 000000010 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:11.567 -08 000000010 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:11.629 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:18:11.629 -08 000000010 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:11.660 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.660 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.661 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.661 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.695 -08 000000010 INF: Y Motor: Recv v 0\r
17-02-28 20:18:11.695 -08 000000010 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:11.695 -08 000000010 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:18:11.695 -08 000000010 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:18:11.754 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:18:11.754 -08 000000010 INF: Y Motor: Start the move command
17-02-28 20:18:11.754 -08 000000010 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:11.810 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.810 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.811 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.811 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.816 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:18:11.816 -08 000000010 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:18:11.816 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:11.943 -08 000000010 INF: Y Motor: Unshifted Position: 5928636
17-02-28 20:18:11.960 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.960 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.961 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.961 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.993 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:12.110 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:18:12.110 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:18:12.110 -08 000000057 INF: ===================Camera #2 Frame #1===================
17-02-28 20:18:12.111 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:18:12.111 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:18:12.111 -08 000000101 INF: ===================Camera #0 Frame #1===================
17-02-28 20:18:12.118 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:12.253 -08 000000010 INF: Y Motor: Unshifted Position: 5882082
17-02-28 20:18:12.263 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:18:12.263 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:18:12.263 -08 000000057 INF: ===================Camera #2 Frame #3===================
17-02-28 20:18:12.265 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:18:12.265 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:18:12.265 -08 000000101 INF: ===================Camera #0 Frame #3===================
17-02-28 20:18:12.303 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:12.423 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:18:12.423 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:18:12.423 -08 000000057 INF: ===================Camera #2 Frame #4===================
17-02-28 20:18:12.424 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:18:12.424 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:18:12.424 -08 000000101 INF: ===================Camera #0 Frame #4===================
17-02-28 20:18:12.428 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:12.566 -08 000000010 INF: Y Motor: Unshifted Position: 5835079
17-02-28 20:18:12.578 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:12.578 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:12.578 -08 000000057 INF: ===================Camera #2 Frame #5===================
17-02-28 20:18:12.579 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:12.579 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:12.579 -08 000000101 INF: ===================Camera #0 Frame #5===================
17-02-28 20:18:12.616 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:12.626 -08 000000064 INF: FPGA: Recv ZWAIT 
17-02-28 20:18:12.626 -08 000000069 INF: ===================Serial===================
17-02-28 20:18:12.628 -08 000000069 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:18:12.628 -08 000000069 INF: ===================Serial===================
17-02-28 20:18:12.629 -08 000000069 INF: ======================================
17-02-28 20:18:12.688 -08 000000053 INF: FPGA: Recv TDIYWAIT
17-02-28 20:18:12.688 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:12.690 -08 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:18:12.691 -08 000000051 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:18:12.691 -08 000000058 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:18:12.691 -08 000000051 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:18:12.691 -08 000000051 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:18:12.691 -08 000000051 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:18:12.691 -08 000000051 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:18:12.691 -08 000000058 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:18:12.692 -08 000000058 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:18:12.692 -08 000000058 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:18:12.693 -08 000000058 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:18:12.731 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:18:12.731 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:18:12.731 -08 000000057 INF: ===================Camera #2 Frame #6===================
17-02-28 20:18:12.732 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:18:12.732 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:18:12.732 -08 000000101 INF: ===================Camera #0 Frame #6===================
17-02-28 20:18:12.734 -08 000000057 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:18:12.735 -08 000000101 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:18:12.735 -08 000000057 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:12.736 -08 000000101 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:12.740 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:12.760 -08 000000057 INF: Camera #2 ReleaseBuffer
17-02-28 20:18:12.760 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:18:12.761 -08 000000057 INF: ======================================
17-02-28 20:18:12.784 -08 000000101 INF: Camera #0 ReleaseBuffer
17-02-28 20:18:12.784 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:18:12.785 -08 000000101 INF: ======================================
17-02-28 20:18:12.786 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:18:12.788 -08 000000081 INF: ======================================
17-02-28 20:18:12.879 -08 000000010 INF: Y Motor: Unshifted Position: 5790760
17-02-28 20:18:12.929 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:13.063 -08 000000109 INF: FPGA: Recv EX2MV
17-02-28 20:18:13.063 -08 000000109 INF: FPGA: Recv EX1MV
17-02-28 20:18:13.063 -08 000000058 INF: Excitation Filter 1: Moved 107 steps in 371.6478 ms
17-02-28 20:18:13.063 -08 000000051 INF: Excitation Filter 2: Moved 107 steps in 371.8678 ms
17-02-28 20:18:13.063 -08 000000058 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.866 ms
17-02-28 20:18:13.063 -08 000000058 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.0203 ms
17-02-28 20:18:13.064 -08 000000051 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.0689 ms
17-02-28 20:18:13.064 -08 000000051 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.283 ms
17-02-28 20:18:13.064 -08 000000058 INF: ======================================
17-02-28 20:18:13.064 -08 000000051 INF: ======================================
17-02-28 20:18:13.065 -08 000000010 INF: Y Motor: Unshifted Position: 5790744
17-02-28 20:18:13.065 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:13.065 -08 000000010 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:13.066 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:13.067 -08 000000085 INF: ======================================
17-02-28 20:18:13.127 -08 000000010 INF: Y Motor: Recv v 0\r
17-02-28 20:18:13.127 -08 000000010 INF: Y Motor: Moved to 62.9074 after 1311 ms
17-02-28 20:18:13.127 -08 000000010 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:13.189 -08 000000010 INF: Y Motor: Recv v 4097\r
17-02-28 20:18:13.189 -08 000000010 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:13.189 -08 000000010 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:13.254 -08 000000010 INF: Y Motor: Recv v 0\r
17-02-28 20:18:13.254 -08 000000010 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:13.254 -08 000000010 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:13.316 -08 000000010 INF: Y Motor: Recv v 134217728\r
17-02-28 20:18:13.316 -08 000000010 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:18:13.316 -08 000000010 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:13.316 -08 000000010 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:13.378 -08 000000010 INF: Y Motor: Recv v 0\r
17-02-28 20:18:13.378 -08 000000010 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:13.378 -08 000000010 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:13.378 -08 000000010 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:13.440 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:18:13.440 -08 000000010 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:13.440 -08 000000010 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:13.503 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:18:13.503 -08 000000010 INF: ======================================
17-02-28 20:18:13.504 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:13.505 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:13.506 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.506 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:18:13.564 -08 000000108 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:18:13.564 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:13.626 -08 000000053 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:18:13.626 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:18:13.688 -08 000000030 INF: FPGA: Recv ZADCR 2423
17-02-28 20:18:13.688 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:18:13.688 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:18:13.752 -08 000000058 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:18:13.753 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:18:13.753 -08 000000018 INF: TDIScan finished after 6971.4415 ms
17-02-28 20:18:13.753 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:18:13.753 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:18:13.753 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:18:13.812 -08 000000057 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:18:13.813 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.813 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.814 -08 000000082 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:18:13.814 -08 000000025 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:18:13.815 -08 000000036 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:18:13.815 -08 000000082 INF: ======================================
17-02-28 20:18:13.815 -08 000000025 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:13.815 -08 000000025 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:13.815 -08 000000036 INF: ======================================
17-02-28 20:18:13.876 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:18:13.876 -08 000000025 INF: ======================================
17-02-28 20:18:13.877 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.878 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.879 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:18:13.921 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.921 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:18:13.950 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.950 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:18:14.006 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:14.006 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:18:14.035 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:14.035 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:14.036 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:14.037 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:18:14.044 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:14.045 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:18:14.045 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:18:14.673 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:18:14.696 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0488909731552131Best Z position at top surface = -0.120294557529975Best Z position at top surface + compensator offset = -0.0975945575299754 C:3,L:3,B
17-02-28 20:18:14.697 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.120294557529975
17-02-28 20:18:14.697 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.72284
17-02-28 20:18:14.697 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0488909731552131
17-02-28 20:18:14.697 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.37886
17-02-28 20:18:14.697 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0488909731552131.
17-02-28 20:18:14.697 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:14.830 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:18:14.830 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:18:14.872 -08 000000072 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:14.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:14.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.874 -08 000000018 INF: Lane 3, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:18:14.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.875 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.876 -08 000000073 INF: ===================Move Tilt Motor 2===================
17-02-28 20:18:14.876 -08 000000047 INF: ===================Move Tilt Motor 1===================
17-02-28 20:18:14.876 -08 000000090 INF: ===================Move Tilt Motor 3===================
17-02-28 20:18:14.876 -08 000000073 INF: ======================================
17-02-28 20:18:14.876 -08 000000047 INF: ======================================
17-02-28 20:18:14.876 -08 000000090 INF: ======================================
17-02-28 20:18:14.877 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.878 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.879 -08 000000018 INF: ETF Best Z: -0.04889097 mm (12816 DAC)
17-02-28 20:18:14.879 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.880 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.880 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:18:14.880 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.881 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.887 -08 000000018 INF: Swath 1 position calculated to be: {X=11.09733, Y=39.70494} from estimated center X= 11.592, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:18:14.887 -08 000000018 INF: Swath 2 position calculated to be: {X=12.20533, Y=39.70494} from estimated center X= 11.592, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:18:15.312 -08 000000018 INF: Swath 0: Converted transform from (102.3501, -49.11802) pixels to (0.03519, -0.016905) mm.
17-02-28 20:18:15.318 -08 000000018 INF: Swath 1: Converted transform from (72.16796, -45.03579) pixels to (0.02484, -0.015525) mm.
17-02-28 20:18:15.319 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494===================
17-02-28 20:18:15.319 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494===================
17-02-28 20:18:15.319 -08 000000018 INF: Transformed XStagePosition from 11.09733 mm to 11.1325248628855 mm.
17-02-28 20:18:15.330 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4780407393128 mm.
17-02-28 20:18:15.330 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2780407393128 mm.
17-02-28 20:18:15.330 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3687907393128 mm.
17-02-28 20:18:15.332 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:15.333 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:18:15.333 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:15.333 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = C_1
17-02-28 20:18:15.339 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:15.339 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:15.340 -08 000000034 INF: ===================MoveEmissionFilters===================
17-02-28 20:18:15.340 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:18:15.340 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:15.341 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:15.341 -08 000000038 INF: ===================Move X,Y, Parallel===================
17-02-28 20:18:15.341 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:15.341 -08 000000073 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:15.341 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:18:15.341 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:15.341 -08 000000072 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:18:15.341 -08 000000072 INF: Z Motor: Moving to -0.0689 mm, started at -0.0100 mm
17-02-28 20:18:15.342 -08 000000072 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:18:15.342 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:15.342 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:15.342 -08 000000073 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:15.342 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:15.343 -08 000000078 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:18:15.343 -08 000000105 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:18:15.343 -08 000000064 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:18:15.343 -08 000000081 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:18:15.343 -08 000000052 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:18:15.343 -08 000000105 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:18:15.343 -08 000000075 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:18:15.343 -08 000000035 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:18:15.343 -08 000000066 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:18:15.343 -08 000000105 INF: ======================================
17-02-28 20:18:15.344 -08 000000052 INF: ======================================
17-02-28 20:18:15.344 -08 000000075 INF: ======================================
17-02-28 20:18:15.344 -08 000000066 INF: ======================================
17-02-28 20:18:15.344 -08 000000078 INF: ======================================
17-02-28 20:18:15.344 -08 000000035 INF: ======================================
17-02-28 20:18:15.345 -08 000000025 INF: ===================Move X Motor without settling===================
17-02-28 20:18:15.345 -08 000000036 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:15.345 -08 000000025 INF: X Motor: Xmit PR VM\n
17-02-28 20:18:15.345 -08 000000036 INF: Y Motor: Moving to 64.4780 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:18:15.345 -08 000000036 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:15.345 -08 000000036 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:15.345 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:15.346 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:15.346 -08 000000064 INF: ======================================
17-02-28 20:18:15.346 -08 000000081 INF: ======================================
17-02-28 20:18:15.346 -08 000000069 INF: ======================================
17-02-28 20:18:15.347 -08 000000047 INF: ======================================
17-02-28 20:18:15.347 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:15.347 -08 000000073 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:15.348 -08 000000045 INF: ======================================
17-02-28 20:18:15.348 -08 000000073 INF: ======================================
17-02-28 20:18:15.349 -08 000000034 INF: ======================================
17-02-28 20:18:15.358 -08 000000039 INF: FPGA: Recv ZTRG 
17-02-28 20:18:15.358 -08 000000072 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:18:15.420 -08 000000069 INF: FPGA: Recv ZYT 
17-02-28 20:18:15.420 -08 000000072 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:18:15.420 -08 000000072 INF: FPGA: Xmit ZMV 18059\n
17-02-28 20:18:15.422 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:18:15.422 -08 000000036 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:15.422 -08 000000036 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:15.422 -08 000000025 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:18:15.423 -08 000000025 INF: X Motor: Xmit PR VI\n
17-02-28 20:18:15.482 -08 000000077 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:18:15.482 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:18:15.484 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:18:15.484 -08 000000025 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:18:15.484 -08 000000025 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:18:15.484 -08 000000036 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:15.484 -08 000000025 INF: X Motor: Moving to 11.1325 mm @15.000 mm/sec, started at 11.6685 mm
17-02-28 20:18:15.484 -08 000000025 INF: X Motor: Xmit MA -19607\n
17-02-28 20:18:15.545 -08 000000073 INF: FPGA: Recv ZMV 
17-02-28 20:18:15.545 -08 000000072 INF: Z Motor: MoveAndTrigger 'ZMV' command took 124.9443 ms
17-02-28 20:18:15.545 -08 000000072 INF: FPGA: Xmit ZDACR\n
17-02-28 20:18:15.547 -08 000000025 INF: X Motor: Recv MA -19607\r\n>
17-02-28 20:18:15.547 -08 000000025 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:18:15.549 -08 000000036 INF: Y Motor: Recv v 0\r
17-02-28 20:18:15.549 -08 000000036 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:15.549 -08 000000036 INF: Y Motor: Set target position to 5947804 encoder counts
17-02-28 20:18:15.549 -08 000000036 INF: Y Motor: Xmit s r0xca 5947804\r
17-02-28 20:18:15.607 -08 000000077 INF: FPGA: Recv ZDACR 18059
17-02-28 20:18:15.607 -08 000000072 INF: Z Motor: MoveAndTrigger took 265.4434 ms w/comms
17-02-28 20:18:15.607 -08 000000072 INF: Z Motor: After move to -0.0689, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:18:15.607 -08 000000072 INF: Z Motor: MoveAbsStepped took 265.6061 ms
17-02-28 20:18:15.607 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:15.609 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:18:15.609 -08 000000036 INF: Y Motor: Start the move command
17-02-28 20:18:15.609 -08 000000036 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:15.609 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:18:15.610 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:18:15.610 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:18:15.610 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:15.611 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:15.611 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:18:15.611 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:15.612 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:15.612 -08 000000090 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:18:15.669 -08 000000066 INF: FPGA: Recv ZSEL 
17-02-28 20:18:15.670 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:15.670 -08 000000090 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:18:15.671 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:18:15.671 -08 000000036 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:18:15.671 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:15.731 -08 000000109 INF: FPGA: Recv TDIBB
17-02-28 20:18:15.731 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:15.732 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:18:15.733 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:15.734 -08 000000090 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:18:15.735 -08 000000090 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:18:15.735 -08 000000090 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:18:15.793 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:15.793 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:15.795 -08 000000036 INF: Y Motor: Unshifted Position: 5872223
17-02-28 20:18:15.795 -08 000000090 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:18:15.795 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:15.797 -08 000000090 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:18:15.797 -08 000000090 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:18:15.797 -08 000000090 INF: Z Motor: Arming to move to -0.0289 mm
17-02-28 20:18:15.797 -08 000000090 INF: FPGA: Xmit ZYT 6427804 4\n
17-02-28 20:18:15.845 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:15.855 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:18:15.855 -08 000000090 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6372223 enc / 63.722 mm / ) = 6427804 enc / 64.278 mm
17-02-28 20:18:15.855 -08 000000090 INF: FPGA: Xmit ZARM 7573\n
17-02-28 20:18:15.919 -08 000000064 INF: FPGA: Recv ZARM
17-02-28 20:18:15.920 -08 000000090 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.4572 ms
17-02-28 20:18:15.920 -08 000000090 INF: Z Motor: ArmAbsStepped took 122.6754 ms
17-02-28 20:18:15.920 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:15.921 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:18:15.923 -08 000000090 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:18:15.923 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:18:15.925 -08 000000090 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:18:15.925 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:18:15.926 -08 000000090 INF: ======================================
17-02-28 20:18:15.969 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:15.981 -08 000000025 INF: X Motor: Xmit PR ER\n
17-02-28 20:18:16.046 -08 000000025 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:18:16.046 -08 000000025 INF: X Motor: Moved to 11.1313 after 499 ms
17-02-28 20:18:16.046 -08 000000025 INF: ======================================
17-02-28 20:18:16.108 -08 000000036 INF: Y Motor: Unshifted Position: 5947804
17-02-28 20:18:16.108 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:16.108 -08 000000036 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:16.170 -08 000000036 INF: Y Motor: Recv v 0\r
17-02-28 20:18:16.170 -08 000000036 INF: Y Motor: Moved to 64.4780 after 499 ms
17-02-28 20:18:16.170 -08 000000036 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:16.232 -08 000000036 INF: Y Motor: Recv v 4096\r
17-02-28 20:18:16.232 -08 000000036 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:16.232 -08 000000036 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:16.295 -08 000000036 INF: Y Motor: Recv v 0\r
17-02-28 20:18:16.295 -08 000000036 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:16.295 -08 000000036 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:16.357 -08 000000036 INF: Y Motor: Recv v 402653184\r
17-02-28 20:18:16.357 -08 000000036 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:18:16.357 -08 000000036 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:16.357 -08 000000036 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:16.419 -08 000000036 INF: Y Motor: Recv v 0\r
17-02-28 20:18:16.419 -08 000000036 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:16.419 -08 000000036 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:16.419 -08 000000036 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:16.484 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:18:16.484 -08 000000036 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:16.484 -08 000000036 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:16.546 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:18:16.546 -08 000000036 INF: ======================================
17-02-28 20:18:16.547 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:18:16.548 -08 000000038 INF: ======================================
17-02-28 20:18:16.567 -08 000000045 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:18:16.567 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:18:16.567 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:16.582 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:16.584 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:17.612 -08 000000045 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:18:17.612 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:18:17.613 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:17.628 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:17.629 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:18:17.631 -08 000000045 INF: ======================================
17-02-28 20:18:17.632 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:17.633 -08 000000072 INF: ======================================
17-02-28 20:18:17.634 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:17.635 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:17.635 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:18:17.635 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:18:17.669 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:17.669 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:18:17.731 -08 000000082 INF: FPGA: Recv ZFREQCL
17-02-28 20:18:17.732 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:18:17.732 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:17.732 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:17.791 -08 000000034 INF: FPGA: Recv TDIYERD 6447805
17-02-28 20:18:17.791 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447805 counts (64.478 mm)
17-02-28 20:18:17.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:17.792 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:17.793 -08 000000072 INF: ===================TDI FPGA Arm===================
17-02-28 20:18:17.793 -08 000000086 INF: ===================Set YMotor gains for scans===================
17-02-28 20:18:17.793 -08 000000086 INF: ======================================
17-02-28 20:18:17.793 -08 000000072 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:17.794 -08 000000072 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:18:17.794 -08 000000072 INF: FPGA: Xmit TDIYPOS 6336879\n
17-02-28 20:18:17.853 -08 000000052 INF: FPGA: Recv TDIYPOS
17-02-28 20:18:17.853 -08 000000072 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:17.854 -08 000000072 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:18:17.855 -08 000000072 INF: FPGA: Xmit TDIYARM3 139264 6427804 1 1\n
17-02-28 20:18:17.915 -08 000000025 INF: FPGA: Recv TDIYARM3
17-02-28 20:18:17.915 -08 000000072 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:17.916 -08 000000072 INF: ===================TDI FPGA Arm===================
17-02-28 20:18:17.917 -08 000000072 INF: ======================================
17-02-28 20:18:17.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:17.919 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:17.919 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:17.920 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:17.920 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:17.921 -08 000000108 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:18:17.921 -08 000000057 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:18:17.921 -08 000000108 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:18:17.921 -08 000000108 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:18:17.921 -08 000000108 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:18:17.921 -08 000000057 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:18:17.921 -08 000000108 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:18:17.921 -08 000000057 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:18:17.921 -08 000000057 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:18:17.922 -08 000000057 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:18:18.292 -08 000000030 INF: FPGA: Recv EX2MV
17-02-28 20:18:18.292 -08 000000030 INF: FPGA: Recv EX1MV
17-02-28 20:18:18.293 -08 000000057 INF: Excitation Filter 1: Moved -107 steps in 371.4075 ms
17-02-28 20:18:18.293 -08 000000057 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 371.5303 ms
17-02-28 20:18:18.293 -08 000000057 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 371.6086 ms
17-02-28 20:18:18.293 -08 000000108 INF: Excitation Filter 2: Moved -107 steps in 371.601 ms
17-02-28 20:18:18.293 -08 000000108 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 371.7854 ms
17-02-28 20:18:18.293 -08 000000108 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 371.8519 ms
17-02-28 20:18:18.293 -08 000000057 INF: ======================================
17-02-28 20:18:18.293 -08 000000108 INF: ======================================
17-02-28 20:18:18.294 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:18.295 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:18.296 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:18:18.296 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:18.296 -08 000000060 INF: ===================FPGA Z Wait===================
17-02-28 20:18:18.296 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:18.296 -08 000000060 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:18:18.296 -08 000000089 INF: Y Motor: Moving to 14.8297 mm @6.500 mm/sec, started at 64.4780 mm
17-02-28 20:18:18.297 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:18.297 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:18.297 -08 000000045 INF: ===================Camera TDI, Parallel===================
17-02-28 20:18:18.297 -08 000000064 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:18:18.298 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:18:18.298 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:18:18.298 -08 000000064 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:18:18.299 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:18.299 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:18.300 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:18.300 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:18.354 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:18:18.354 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:18.354 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:18.416 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:18:18.416 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:18.449 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:18.449 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:18.450 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:18.450 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:18.478 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:18:18.478 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:18.478 -08 000000089 INF: Y Motor: Set target position to 982970 encoder counts
17-02-28 20:18:18.478 -08 000000089 INF: Y Motor: Xmit s r0xca 982970\r
17-02-28 20:18:18.543 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:18:18.543 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:18:18.543 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:18.599 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:18.599 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:18.600 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:18.600 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:18.603 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:18:18.603 -08 000000089 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:18:18.603 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:18.663 -08 000000077 INF: FPGA: Recv ZWAIT 
17-02-28 20:18:18.663 -08 000000060 INF: ======================================
17-02-28 20:18:18.730 -08 000000089 INF: Y Motor: Unshifted Position: 5887252
17-02-28 20:18:18.749 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:18.749 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:18.749 -08 000000047 INF: ===================Camera #2 Frame #5===================
17-02-28 20:18:18.750 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:18.750 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:18.750 -08 000000105 INF: ===================Camera #0 Frame #5===================
17-02-28 20:18:18.780 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:18.904 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:18.916 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:18:18.916 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:18:18.916 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:18:18.916 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:18:18.916 -08 000000047 INF: ===================Camera #2 Frame #11===================
17-02-28 20:18:18.916 -08 000000105 INF: ===================Camera #0 Frame #11===================
17-02-28 20:18:19.040 -08 000000089 INF: Y Motor: Unshifted Position: 5683582
17-02-28 20:18:19.086 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:18:19.086 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:18:19.086 -08 000000105 INF: ===================Camera #0 Frame #17===================
17-02-28 20:18:19.087 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:18:19.087 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:18:19.087 -08 000000047 INF: ===================Camera #2 Frame #17===================
17-02-28 20:18:19.090 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:19.217 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:19.255 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:18:19.255 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:18:19.255 -08 000000105 INF: ===================Camera #0 Frame #23===================
17-02-28 20:18:19.257 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:18:19.257 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:18:19.257 -08 000000047 INF: ===================Camera #2 Frame #23===================
17-02-28 20:18:19.353 -08 000000089 INF: Y Motor: Unshifted Position: 5479488
17-02-28 20:18:19.403 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:19.423 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:18:19.423 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:18:19.423 -08 000000105 INF: ===================Camera #0 Frame #29===================
17-02-28 20:18:19.426 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:18:19.426 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:18:19.426 -08 000000047 INF: ===================Camera #2 Frame #29===================
17-02-28 20:18:19.529 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:19.591 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:18:19.591 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:18:19.591 -08 000000105 INF: ===================Camera #0 Frame #36===================
17-02-28 20:18:19.595 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:18:19.595 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:18:19.595 -08 000000047 INF: ===================Camera #2 Frame #36===================
17-02-28 20:18:19.666 -08 000000089 INF: Y Motor: Unshifted Position: 5278635
17-02-28 20:18:19.716 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:19.762 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:18:19.762 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:18:19.762 -08 000000105 INF: ===================Camera #0 Frame #42===================
17-02-28 20:18:19.767 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:18:19.767 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:18:19.767 -08 000000047 INF: ===================Camera #2 Frame #42===================
17-02-28 20:18:19.840 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:19.932 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:18:19.932 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:18:19.932 -08 000000105 INF: ===================Camera #0 Frame #48===================
17-02-28 20:18:19.938 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:18:19.938 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:18:19.938 -08 000000047 INF: ===================Camera #2 Frame #48===================
17-02-28 20:18:19.976 -08 000000089 INF: Y Motor: Unshifted Position: 5074968
17-02-28 20:18:20.026 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.102 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:18:20.102 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:18:20.102 -08 000000105 INF: ===================Camera #0 Frame #54===================
17-02-28 20:18:20.108 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:18:20.108 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:18:20.108 -08 000000047 INF: ===================Camera #2 Frame #55===================
17-02-28 20:18:20.153 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.272 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:18:20.272 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:18:20.272 -08 000000105 INF: ===================Camera #0 Frame #61===================
17-02-28 20:18:20.282 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:18:20.282 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:18:20.282 -08 000000047 INF: ===================Camera #2 Frame #61===================
17-02-28 20:18:20.289 -08 000000089 INF: Y Motor: Unshifted Position: 4871303
17-02-28 20:18:20.339 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.445 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:18:20.445 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:18:20.445 -08 000000105 INF: ===================Camera #0 Frame #67===================
17-02-28 20:18:20.453 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:18:20.453 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:18:20.453 -08 000000047 INF: ===================Camera #2 Frame #67===================
17-02-28 20:18:20.463 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.602 -08 000000089 INF: Y Motor: Unshifted Position: 4669803
17-02-28 20:18:20.615 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:18:20.615 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:18:20.615 -08 000000105 INF: ===================Camera #0 Frame #73===================
17-02-28 20:18:20.624 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:18:20.624 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:18:20.624 -08 000000047 INF: ===================Camera #2 Frame #74===================
17-02-28 20:18:20.652 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.779 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.785 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:18:20.785 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:18:20.785 -08 000000105 INF: ===================Camera #0 Frame #80===================
17-02-28 20:18:20.798 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:18:20.798 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:18:20.798 -08 000000047 INF: ===================Camera #2 Frame #80===================
17-02-28 20:18:20.912 -08 000000089 INF: Y Motor: Unshifted Position: 4465691
17-02-28 20:18:20.958 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:18:20.958 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:18:20.958 -08 000000105 INF: ===================Camera #0 Frame #86===================
17-02-28 20:18:20.962 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.969 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:18:20.969 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:18:20.969 -08 000000047 INF: ===================Camera #2 Frame #86===================
17-02-28 20:18:21.089 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:21.128 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:18:21.128 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:18:21.128 -08 000000105 INF: ===================Camera #0 Frame #92===================
17-02-28 20:18:21.139 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:18:21.139 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:18:21.139 -08 000000047 INF: ===================Camera #2 Frame #93===================
17-02-28 20:18:21.225 -08 000000089 INF: Y Motor: Unshifted Position: 4262679
17-02-28 20:18:21.275 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:21.298 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:18:21.298 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:18:21.298 -08 000000105 INF: ===================Camera #0 Frame #98===================
17-02-28 20:18:21.313 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:18:21.313 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:18:21.313 -08 000000047 INF: ===================Camera #2 Frame #99===================
17-02-28 20:18:21.399 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:21.468 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:18:21.468 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:18:21.468 -08 000000105 INF: ===================Camera #0 Frame #105===================
17-02-28 20:18:21.484 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:18:21.484 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:18:21.484 -08 000000047 INF: ===================Camera #2 Frame #105===================
17-02-28 20:18:21.538 -08 000000089 INF: Y Motor: Unshifted Position: 4060952
17-02-28 20:18:21.588 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:21.641 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:18:21.641 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:18:21.641 -08 000000105 INF: ===================Camera #0 Frame #111===================
17-02-28 20:18:21.655 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:18:21.655 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:18:21.655 -08 000000047 INF: ===================Camera #2 Frame #112===================
17-02-28 20:18:21.710 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:21.811 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:18:21.811 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:18:21.811 -08 000000105 INF: ===================Camera #0 Frame #117===================
17-02-28 20:18:21.829 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:18:21.829 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:18:21.829 -08 000000047 INF: ===================Camera #2 Frame #118===================
17-02-28 20:18:21.850 -08 000000089 INF: Y Motor: Unshifted Position: 3858157
17-02-28 20:18:21.900 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:21.981 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:18:21.981 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:18:21.981 -08 000000105 INF: ===================Camera #0 Frame #124===================
17-02-28 20:18:22.000 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:18:22.000 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:18:22.000 -08 000000047 INF: ===================Camera #2 Frame #124===================
17-02-28 20:18:22.024 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:22.154 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:18:22.154 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:18:22.154 -08 000000105 INF: ===================Camera #0 Frame #130===================
17-02-28 20:18:22.160 -08 000000089 INF: Y Motor: Unshifted Position: 3654707
17-02-28 20:18:22.171 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:18:22.171 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:18:22.171 -08 000000047 INF: ===================Camera #2 Frame #131===================
17-02-28 20:18:22.210 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:22.324 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:18:22.324 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:18:22.324 -08 000000105 INF: ===================Camera #0 Frame #136===================
17-02-28 20:18:22.334 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:22.345 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:18:22.345 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:18:22.345 -08 000000047 INF: ===================Camera #2 Frame #137===================
17-02-28 20:18:22.474 -08 000000089 INF: Y Motor: Unshifted Position: 3452336
17-02-28 20:18:22.494 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:18:22.494 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:18:22.494 -08 000000105 INF: ===================Camera #0 Frame #142===================
17-02-28 20:18:22.514 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:18:22.514 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:18:22.514 -08 000000047 INF: ===================Camera #2 Frame #143===================
17-02-28 20:18:22.524 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:22.648 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:22.663 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:18:22.663 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:18:22.663 -08 000000105 INF: ===================Camera #0 Frame #149===================
17-02-28 20:18:22.685 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:18:22.685 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:18:22.685 -08 000000047 INF: ===================Camera #2 Frame #149===================
17-02-28 20:18:22.786 -08 000000089 INF: Y Motor: Unshifted Position: 3249537
17-02-28 20:18:22.836 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:22.836 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:18:22.836 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:18:22.836 -08 000000105 INF: ===================Camera #0 Frame #155===================
17-02-28 20:18:22.856 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:18:22.856 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:18:22.856 -08 000000047 INF: ===================Camera #2 Frame #156===================
17-02-28 20:18:22.960 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:23.006 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:18:23.006 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:18:23.006 -08 000000105 INF: ===================Camera #0 Frame #161===================
17-02-28 20:18:23.030 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:18:23.030 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:18:23.030 -08 000000047 INF: ===================Camera #2 Frame #162===================
17-02-28 20:18:23.096 -08 000000089 INF: Y Motor: Unshifted Position: 3045875
17-02-28 20:18:23.146 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:23.176 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:18:23.176 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:18:23.176 -08 000000105 INF: ===================Camera #0 Frame #168===================
17-02-28 20:18:23.201 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:18:23.201 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:18:23.201 -08 000000047 INF: ===================Camera #2 Frame #168===================
17-02-28 20:18:23.270 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:23.349 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:18:23.349 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:18:23.349 -08 000000105 INF: ===================Camera #0 Frame #174===================
17-02-28 20:18:23.372 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:18:23.372 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:18:23.372 -08 000000047 INF: ===================Camera #2 Frame #175===================
17-02-28 20:18:23.410 -08 000000089 INF: Y Motor: Unshifted Position: 2842867
17-02-28 20:18:23.460 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:23.519 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:18:23.519 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:18:23.519 -08 000000105 INF: ===================Camera #0 Frame #180===================
17-02-28 20:18:23.546 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:18:23.546 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:18:23.546 -08 000000047 INF: ===================Camera #2 Frame #181===================
17-02-28 20:18:23.584 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:23.689 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:18:23.689 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:18:23.689 -08 000000105 INF: ===================Camera #0 Frame #186===================
17-02-28 20:18:23.717 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:18:23.717 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:18:23.717 -08 000000047 INF: ===================Camera #2 Frame #187===================
17-02-28 20:18:23.722 -08 000000089 INF: Y Motor: Unshifted Position: 2640715
17-02-28 20:18:23.772 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:23.859 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:18:23.859 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:18:23.859 -08 000000105 INF: ===================Camera #0 Frame #193===================
17-02-28 20:18:23.888 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:18:23.888 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:18:23.888 -08 000000047 INF: ===================Camera #2 Frame #194===================
17-02-28 20:18:23.896 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.032 -08 000000089 INF: Y Motor: Unshifted Position: 2437062
17-02-28 20:18:24.032 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:18:24.032 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:18:24.032 -08 000000105 INF: ===================Camera #0 Frame #199===================
17-02-28 20:18:24.062 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:18:24.062 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:18:24.062 -08 000000047 INF: ===================Camera #2 Frame #200===================
17-02-28 20:18:24.082 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.202 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:18:24.202 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:18:24.202 -08 000000105 INF: ===================Camera #0 Frame #205===================
17-02-28 20:18:24.206 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.233 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:18:24.233 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:18:24.233 -08 000000047 INF: ===================Camera #2 Frame #206===================
17-02-28 20:18:24.347 -08 000000089 INF: Y Motor: Unshifted Position: 2234685
17-02-28 20:18:24.372 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:18:24.372 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:18:24.372 -08 000000105 INF: ===================Camera #0 Frame #212===================
17-02-28 20:18:24.397 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.404 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:18:24.404 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:18:24.404 -08 000000047 INF: ===================Camera #2 Frame #213===================
17-02-28 20:18:24.520 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.544 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:18:24.544 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:18:24.544 -08 000000105 INF: ===================Camera #0 Frame #218===================
17-02-28 20:18:24.576 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:18:24.576 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:18:24.576 -08 000000047 INF: ===================Camera #2 Frame #219===================
17-02-28 20:18:24.658 -08 000000089 INF: Y Motor: Unshifted Position: 2031234
17-02-28 20:18:24.708 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.712 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:18:24.712 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:18:24.712 -08 000000105 INF: ===================Camera #0 Frame #224===================
17-02-28 20:18:24.745 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:18:24.745 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:18:24.745 -08 000000047 INF: ===================Camera #2 Frame #225===================
17-02-28 20:18:24.832 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.882 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:18:24.882 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:18:24.882 -08 000000105 INF: ===================Camera #0 Frame #230===================
17-02-28 20:18:24.916 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:18:24.916 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:18:24.916 -08 000000047 INF: ===================Camera #2 Frame #232===================
17-02-28 20:18:24.968 -08 000000089 INF: Y Motor: Unshifted Position: 1828215
17-02-28 20:18:25.018 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:25.052 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:18:25.052 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:18:25.052 -08 000000105 INF: ===================Camera #0 Frame #237===================
17-02-28 20:18:25.090 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:18:25.090 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:18:25.090 -08 000000047 INF: ===================Camera #2 Frame #238===================
17-02-28 20:18:25.142 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:25.225 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:18:25.225 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:18:25.225 -08 000000105 INF: ===================Camera #0 Frame #243===================
17-02-28 20:18:25.261 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:18:25.261 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:18:25.261 -08 000000047 INF: ===================Camera #2 Frame #244===================
17-02-28 20:18:25.282 -08 000000089 INF: Y Motor: Unshifted Position: 1626068
17-02-28 20:18:25.332 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:25.395 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:18:25.395 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:18:25.395 -08 000000105 INF: ===================Camera #0 Frame #249===================
17-02-28 20:18:25.432 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:18:25.432 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:18:25.432 -08 000000047 INF: ===================Camera #2 Frame #251===================
17-02-28 20:18:25.457 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:25.564 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:18:25.564 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:18:25.564 -08 000000105 INF: ===================Camera #0 Frame #255===================
17-02-28 20:18:25.592 -08 000000089 INF: Y Motor: Unshifted Position: 1422614
17-02-28 20:18:25.606 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:18:25.606 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:18:25.606 -08 000000047 INF: ===================Camera #2 Frame #257===================
17-02-28 20:18:25.642 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:25.733 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:18:25.733 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:18:25.733 -08 000000105 INF: ===================Camera #0 Frame #262===================
17-02-28 20:18:25.766 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:25.777 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:18:25.777 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:18:25.777 -08 000000047 INF: ===================Camera #2 Frame #263===================
17-02-28 20:18:25.903 -08 000000089 INF: Y Motor: Unshifted Position: 1218292
17-02-28 20:18:25.906 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:18:25.906 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:18:25.906 -08 000000105 INF: ===================Camera #0 Frame #268===================
17-02-28 20:18:25.948 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:18:25.948 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:18:25.948 -08 000000047 INF: ===================Camera #2 Frame #270===================
17-02-28 20:18:25.953 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:26.028 -08 000000101 INF: FPGA: Recv TDIYWAIT
17-02-28 20:18:26.028 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:26.030 -08 000000064 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:18:26.031 -08 000000077 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:18:26.031 -08 000000086 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:18:26.031 -08 000000077 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:18:26.031 -08 000000077 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:18:26.031 -08 000000077 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:18:26.031 -08 000000086 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:18:26.031 -08 000000077 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:18:26.031 -08 000000086 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:18:26.031 -08 000000086 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:18:26.032 -08 000000086 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:18:26.076 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:18:26.076 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:18:26.076 -08 000000105 INF: ===================Camera #0 Frame #272===================
17-02-28 20:18:26.080 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:26.089 -08 000000105 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:18:26.090 -08 000000105 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:26.216 -08 000000089 INF: Y Motor: Unshifted Position: 1016574
17-02-28 20:18:26.256 -08 000000105 INF: Camera #0 ReleaseBuffer
17-02-28 20:18:26.256 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:18:26.256 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:18:26.256 -08 000000047 INF: ===================Camera #2 Frame #272===================
17-02-28 20:18:26.256 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:18:26.263 -08 000000047 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:18:26.264 -08 000000047 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:26.267 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:26.293 -08 000000105 INF: ======================================
17-02-28 20:18:26.405 -08 000000072 INF: FPGA: Recv EX1MV
17-02-28 20:18:26.405 -08 000000072 INF: FPGA: Recv EX2MV
17-02-28 20:18:26.405 -08 000000077 INF: Excitation Filter 1: Moved 107 steps in 373.051 ms
17-02-28 20:18:26.405 -08 000000086 INF: Excitation Filter 2: Moved 107 steps in 372.954 ms
17-02-28 20:18:26.405 -08 000000086 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.1646 ms
17-02-28 20:18:26.405 -08 000000086 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.2349 ms
17-02-28 20:18:26.405 -08 000000077 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.1669 ms
17-02-28 20:18:26.405 -08 000000077 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.5494 ms
17-02-28 20:18:26.405 -08 000000086 INF: ======================================
17-02-28 20:18:26.406 -08 000000077 INF: ======================================
17-02-28 20:18:26.407 -08 000000089 INF: Y Motor: Unshifted Position: 982970
17-02-28 20:18:26.407 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:26.407 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:26.407 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:26.408 -08 000000064 INF: ======================================
17-02-28 20:18:26.463 -08 000000047 INF: Camera #2 ReleaseBuffer
17-02-28 20:18:26.463 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:18:26.466 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:18:26.466 -08 000000089 INF: Y Motor: Moved to 14.8297 after 7862 ms
17-02-28 20:18:26.466 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:26.499 -08 000000047 INF: ======================================
17-02-28 20:18:26.500 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:18:26.501 -08 000000045 INF: ======================================
17-02-28 20:18:26.528 -08 000000089 INF: Y Motor: Recv v 4097\r
17-02-28 20:18:26.528 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:26.528 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:26.561 -08 000000010 INF: RunCopyService queue size at 2/28/2017 8:18:26 PM is 2
17-02-28 20:18:26.591 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:18:26.591 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:26.591 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:26.653 -08 000000089 INF: Y Motor: Recv v 134217728\r
17-02-28 20:18:26.653 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:18:26.653 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:26.653 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:26.716 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:18:26.716 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:26.716 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:26.716 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:26.778 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:18:26.778 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:26.778 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:26.840 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:18:26.840 -08 000000089 INF: ======================================
17-02-28 20:18:26.841 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:26.842 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:26.843 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:26.843 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:18:26.903 -08 000000050 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:18:26.903 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:26.965 -08 000000025 INF: FPGA: Recv TDIYERD 1482971
17-02-28 20:18:26.965 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:18:27.027 -08 000000036 INF: FPGA: Recv ZADCR 16671
17-02-28 20:18:27.027 -08 000000018 INF: At scan end Y pos = 14.830 and Z pos = -0.064. Y moved -48.539 mm
17-02-28 20:18:27.027 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:18:27.090 -08 000000101 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:18:27.090 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:18:27.090 -08 000000018 INF: TDIScan finished after 11768.9868 ms
17-02-28 20:18:27.090 -08 000000018 INF: Image[0]: Y should trigger at 63.369 mm, 2nd row was at 64.278 mm (error = 0.909 mm)
17-02-28 20:18:27.090 -08 000000018 INF: Image[2]: Y should trigger at 63.369 mm, 2nd row was at 64.278 mm (error = 0.909 mm)
17-02-28 20:18:27.092 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.125 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.799 um
17-02-28 20:18:27.125 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.126 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:18:27.151 -08 000000036 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:18:27.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.152 -08 000000078 INF: ===================Dither Clean Up Command===================
17-02-28 20:18:27.152 -08 000000064 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:18:27.152 -08 000000087 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:18:27.152 -08 000000072 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:18:27.153 -08 000000087 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:27.153 -08 000000087 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:27.153 -08 000000064 INF: ======================================
17-02-28 20:18:27.153 -08 000000072 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:18:27.153 -08 000000072 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:18:27.153 -08 000000030 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:18:27.153 -08 000000057 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:27.154 -08 000000030 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:18:27.156 -08 000000057 INF: ===================LFT:Extracting coords===================
17-02-28 20:18:27.182 -08 000000057 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:27.182 -08 000000057 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:18:27.183 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.183 -08 000000025 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.183 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.183 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.184 -08 000000105 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:27.184 -08 000000025 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:27.184 -08 000000090 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:27.184 -08 000000058 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:27.213 -08 000000039 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:27.213 -08 000000039 INF: FPGA: Recv ZSEL 
17-02-28 20:18:27.213 -08 000000030 INF: FPGA: Xmit ZDACW 18059\n
17-02-28 20:18:27.213 -08 000000072 INF: ======================================
17-02-28 20:18:27.215 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:18:27.215 -08 000000087 INF: ======================================
17-02-28 20:18:27.258 -08 000000105 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:27.258 -08 000000025 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:27.258 -08 000000090 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:27.258 -08 000000058 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:27.275 -08 000000081 INF: FPGA: Recv ZDACW 
17-02-28 20:18:27.276 -08 000000030 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:18:27.276 -08 000000030 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:18:27.342 -08 000000087 INF: FPGA: Recv TDIBB
17-02-28 20:18:27.342 -08 000000030 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:18:27.343 -08 000000030 INF: ======================================
17-02-28 20:18:27.409 -08 000000105 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:18:27.409 -08 000000105 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0488909731552131 in the next cycle, cycle 4 FC:A, C:3,L:3,B
17-02-28 20:18:27.409 -08 000000025 INF: LFT found best fwhm score 2.000251 in 151 ms
17-02-28 20:18:27.409 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.409 -08 000000025 INF: LFT found good score at index 4961 with fwhm value 2.000251. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:3,B
17-02-28 20:18:27.409 -08 000000058 INF: LFT found best fwhm score 2.000115 in 151 ms
17-02-28 20:18:27.409 -08 000000058 INF: LFT found good score at index 769 with fwhm value 2.000115. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:3,B
17-02-28 20:18:27.409 -08 000000090 INF: LFT found best fwhm score 2.070725 in 151 ms
17-02-28 20:18:27.409 -08 000000090 INF: LFT found good score at index 3169 with fwhm value 2.070725. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:3,B
17-02-28 20:18:27.409 -08 000000025 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.410 -08 000000105 INF: ======================================
17-02-28 20:18:27.410 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.410 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.410 -08 000000025 INF: ======================================
17-02-28 20:18:27.410 -08 000000058 INF: ======================================
17-02-28 20:18:27.410 -08 000000090 INF: ======================================
17-02-28 20:18:27.411 -08 000000057 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:27.412 -08 000000057 INF: LFT weighted average best Z for bottom surface is at -0.048mm FC:A, C:3,L:3,B
17-02-28 20:18:27.412 -08 000000057 INF: ======================================
17-02-28 20:18:27.413 -08 000000078 INF: ======================================
17-02-28 20:18:27.414 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:18:27.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:18:27.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:18:27.416 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.416 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:18:27.416 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.416 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494===================
17-02-28 20:18:27.416 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494===================
17-02-28 20:18:27.417 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:18:27.417 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494===================
17-02-28 20:18:27.417 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:18:27.417 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:18:27.440 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:18:27.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:27.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494===================
17-02-28 20:18:27.441 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:27.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494===================
17-02-28 20:18:27.441 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:18:27.441 -08 000000018 INF: Transformed XStagePosition from 12.20533 mm to 12.2301746625453 mm.
17-02-28 20:18:27.488 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4794207395762 mm.
17-02-28 20:18:27.488 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2794207395762 mm.
17-02-28 20:18:27.488 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3701707395762 mm.
17-02-28 20:18:27.491 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.491 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:18:27.492 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.492 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -68.9 um, section = C_1
17-02-28 20:18:27.493 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:27.494 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:27.501 -08 000000073 INF: ===================MoveEmissionFilters===================
17-02-28 20:18:27.504 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:18:27.505 -08 000000035 INF: ===================Move X,Y, Parallel===================
17-02-28 20:18:27.507 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:27.508 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:27.511 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":3,"Tile":2107,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF212","HCSMMF213","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.511 -08 000000105 INF: ===================Move X Motor without settling===================
17-02-28 20:18:27.511 -08 000000051 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:18:27.511 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:27.511 -08 000000105 INF: X Motor: Xmit PR VM\n
17-02-28 20:18:27.512 -08 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:27.512 -08 000000051 INF: ======================================
17-02-28 20:18:27.512 -08 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:27.513 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:18:27.513 -08 000000101 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:18:27.513 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:27.514 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:27.514 -08 000000072 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:27.514 -08 000000072 INF: Y Motor: Moving to 64.4794 mm @25.000 mm/sec, started at 14.8297 mm
17-02-28 20:18:27.514 -08 000000078 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:18:27.514 -08 000000078 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:18:27.514 -08 000000072 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:27.514 -08 000000072 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:27.514 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:27.515 -08 000000078 INF: ======================================
17-02-28 20:18:27.515 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:18:27.516 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:27.516 -08 000000089 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:18:27.516 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:27.517 -08 000000057 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:18:27.517 -08 000000089 INF: ======================================
17-02-28 20:18:27.517 -08 000000087 INF: ======================================
17-02-28 20:18:27.517 -08 000000057 INF: ======================================
17-02-28 20:18:27.517 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:27.518 -08 000000089 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:18:27.519 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:18:27.519 -08 000000089 INF: ======================================
17-02-28 20:18:27.519 -08 000000087 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:18:27.519 -08 000000057 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:18:27.520 -08 000000087 INF: ======================================
17-02-28 20:18:27.520 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:27.520 -08 000000057 INF: ======================================
17-02-28 20:18:27.520 -08 000000039 INF: ===================Camera Arm TDI===================
17-02-28 20:18:27.521 -08 000000078 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:18:27.521 -08 000000078 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:27.521 -08 000000078 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:18:27.521 -08 000000039 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:27.522 -08 000000039 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:27.522 -08 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:27.523 -08 000000082 INF: ======================================
17-02-28 20:18:27.526 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:27.527 -08 000000051 INF: ======================================
17-02-28 20:18:27.527 -08 000000036 INF: FPGA: Recv ZSEL 
17-02-28 20:18:27.540 -08 000000038 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:18:27.541 -08 000000038 INF: ======================================
17-02-28 20:18:27.543 -08 000000078 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:27.543 -08 000000078 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:18:27.543 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:27.545 -08 000000064 INF: ======================================
17-02-28 20:18:27.546 -08 000000073 INF: ======================================
17-02-28 20:18:27.553 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":3,"Tile":2106,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF203","HCSMMF189","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.581 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":3,"Tile":2101,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF226","HCSMMF247","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.589 -08 000000075 INF: FPGA: Recv TDIBB
17-02-28 20:18:27.590 -08 000000078 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:27.591 -08 000000105 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:18:27.591 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:18:27.591 -08 000000072 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:27.591 -08 000000072 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:27.591 -08 000000105 INF: X Motor: Xmit PR VI\n
17-02-28 20:18:27.591 -08 000000078 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:18:27.592 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":3,"Tile":2104,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF286","HCSMMF256","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.592 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:27.593 -08 000000078 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:18:27.593 -08 000000078 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:18:27.594 -08 000000078 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:18:27.650 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":3,"Tile":2108,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF230","HCSMMF202","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.652 -08 000000089 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:27.652 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:27.654 -08 000000105 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:18:27.654 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:18:27.654 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:27.654 -08 000000078 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:18:27.654 -08 000000105 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:18:27.654 -08 000000105 INF: X Motor: Moving to 12.2302 mm @15.000 mm/sec, started at 11.1313 mm
17-02-28 20:18:27.654 -08 000000105 INF: X Motor: Xmit MA -19157\n
17-02-28 20:18:27.654 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:27.655 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":3,"Tile":2109,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF241","HCSMMF227","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.656 -08 000000078 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:18:27.656 -08 000000078 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:18:27.656 -08 000000078 INF: Z Motor: Arming to move to -0.0289 mm
17-02-28 20:18:27.656 -08 000000078 INF: FPGA: Xmit ZYT 6427942 4\n
17-02-28 20:18:27.657 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":3,"Tile":2105,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF235","HCSMMF277","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.658 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":3,"Tile":2102,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF211","HCSMMF231","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.659 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":3,"Tile":2103,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF239","HCSMMF265","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.660 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":3,"Tile":2110,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF194","HCSMMF245","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.660 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":3,"Tile":2111,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF267","HCSMMF252","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.661 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":3,"Tile":2112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF237","HCSMMF254","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.662 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":3,"Tile":2116,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF210","HCSMMF248","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.662 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":3,"Tile":2115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF192","HCSMMF217","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.663 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":3,"Tile":2113,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF250","HCSMMF278","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.664 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":3,"Tile":2117,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF232","HCSMMF270","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.665 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":3,"Tile":2122,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF182","HCSMMF261","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.665 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":3,"Tile":2114,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF198","HCSMMF177","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.666 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":3,"Tile":2119,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF238","HCSMMF183","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.667 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":3,"Tile":2121,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF193","HCSMMF199","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.668 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":3,"Tile":2120,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF240","HCSMMF283","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.669 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":3,"Tile":2124,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF246","HCSMMF190","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.669 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":3,"Tile":2126,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF197","HCSMMF205","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.670 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":3,"Tile":2118,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF187","HCSMMF220","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.671 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":3,"Tile":2128,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF207","HCSMMF253","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.672 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":3,"Tile":2125,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF272","HCSMMF275","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.674 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":3,"Tile":2123,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF236","HCSMMF186","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.675 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":3,"Tile":2127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF195","HCSMMF262","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.712 -08 000000060 INF: FPGA: Recv ZYT 
17-02-28 20:18:27.712 -08 000000078 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1482970 enc / 14.830 mm / ) = 6427942 enc / 64.279 mm
17-02-28 20:18:27.712 -08 000000078 INF: FPGA: Xmit ZARM 7573\n
17-02-28 20:18:27.714 -08 000000105 INF: X Motor: Recv MA -19157\r\n>
17-02-28 20:18:27.714 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:18:27.714 -08 000000072 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:27.714 -08 000000105 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:18:27.714 -08 000000072 INF: Y Motor: Set target position to 5947942 encoder counts
17-02-28 20:18:27.714 -08 000000072 INF: Y Motor: Xmit s r0xca 5947942\r
17-02-28 20:18:27.715 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:27.721 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:18:27.774 -08 000000010 INF: FPGA: Recv ZARM
17-02-28 20:18:27.774 -08 000000078 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.7979 ms
17-02-28 20:18:27.774 -08 000000078 INF: Z Motor: ArmAbsStepped took 117.8831 ms
17-02-28 20:18:27.774 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:27.776 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:18:27.776 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:18:27.776 -08 000000072 INF: Y Motor: Start the move command
17-02-28 20:18:27.776 -08 000000072 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:27.777 -08 000000078 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:18:27.777 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:18:27.779 -08 000000078 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:18:27.779 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:18:27.780 -08 000000078 INF: ======================================
17-02-28 20:18:27.817 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:27.817 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:18:27.841 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:18:27.841 -08 000000072 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:18:27.841 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:27.854 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:27.860 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:18:27.965 -08 000000072 INF: Y Motor: Unshifted Position: 1067800
17-02-28 20:18:27.967 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:27.972 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:18:28.015 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:28.053 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:28.058 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:18:28.113 -08 000000039 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:18:28.113 -08 000000039 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:18:28.113 -08 000000039 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:28.128 -08 000000039 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:28.130 -08 000000039 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:28.139 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:28.162 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:28.281 -08 000000072 INF: Y Motor: Unshifted Position: 1772139
17-02-28 20:18:28.331 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:28.338 -08 000000105 INF: X Motor: Xmit PR ER\n
17-02-28 20:18:28.400 -08 000000105 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:18:28.400 -08 000000105 INF: X Motor: Moved to 12.2300 after 686 ms
17-02-28 20:18:28.400 -08 000000105 INF: ======================================
17-02-28 20:18:28.450 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:28.470 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:18:28.589 -08 000000072 INF: Y Motor: Unshifted Position: 2557988
17-02-28 20:18:28.639 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:28.728 -08 000000039 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:18:28.728 -08 000000039 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:18:28.728 -08 000000039 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:28.744 -08 000000039 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:28.746 -08 000000039 INF: ===================Camera Arm TDI===================
17-02-28 20:18:28.748 -08 000000039 INF: ======================================
17-02-28 20:18:28.749 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:28.750 -08 000000101 INF: ======================================
17-02-28 20:18:28.762 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:28.901 -08 000000072 INF: Y Motor: Unshifted Position: 3337929
17-02-28 20:18:28.951 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:29.075 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:29.217 -08 000000072 INF: Y Motor: Unshifted Position: 4120504
17-02-28 20:18:29.267 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:29.422 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:29.524 -08 000000072 INF: Y Motor: Unshifted Position: 4898776
17-02-28 20:18:29.574 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:29.700 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:29.837 -08 000000072 INF: Y Motor: Unshifted Position: 5672417
17-02-28 20:18:29.887 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:30.010 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:30.148 -08 000000072 INF: Y Motor: Unshifted Position: 5947944
17-02-28 20:18:30.148 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:30.148 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:30.210 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:18:30.210 -08 000000072 INF: Y Motor: Moved to 64.4794 after 2369 ms
17-02-28 20:18:30.210 -08 000000072 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:30.274 -08 000000072 INF: Y Motor: Recv v 4096\r
17-02-28 20:18:30.274 -08 000000072 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:30.274 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:30.336 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:18:30.336 -08 000000072 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:30.336 -08 000000072 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:30.398 -08 000000072 INF: Y Motor: Recv v 402653184\r
17-02-28 20:18:30.398 -08 000000072 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:18:30.398 -08 000000072 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:30.398 -08 000000072 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:30.459 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:18:30.459 -08 000000072 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:30.459 -08 000000072 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:30.459 -08 000000072 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:30.524 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:18:30.524 -08 000000072 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:30.524 -08 000000072 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:30.585 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:18:30.585 -08 000000072 INF: ======================================
17-02-28 20:18:30.587 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:18:30.588 -08 000000035 INF: ======================================
17-02-28 20:18:30.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:30.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:30.589 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:18:30.590 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:18:30.647 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:30.647 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:18:30.708 -08 000000036 INF: FPGA: Recv ZFREQCL
17-02-28 20:18:30.708 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:18:30.709 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:30.709 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:30.769 -08 000000053 INF: FPGA: Recv TDIYERD 6447944
17-02-28 20:18:30.769 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447944 counts (64.479 mm)
17-02-28 20:18:30.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:30.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:30.771 -08 000000045 INF: ===================TDI FPGA Arm===================
17-02-28 20:18:30.771 -08 000000090 INF: ===================Set YMotor gains for scans===================
17-02-28 20:18:30.771 -08 000000090 INF: ======================================
17-02-28 20:18:30.772 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:30.772 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:18:30.773 -08 000000045 INF: FPGA: Xmit TDIYPOS 6337017\n
17-02-28 20:18:30.834 -08 000000035 INF: FPGA: Recv TDIYPOS
17-02-28 20:18:30.834 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:30.836 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:18:30.836 -08 000000045 INF: FPGA: Xmit TDIYARM3 139264 6427942 1 1\n
17-02-28 20:18:30.895 -08 000000082 INF: FPGA: Recv TDIYARM3
17-02-28 20:18:30.895 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:30.896 -08 000000045 INF: ===================TDI FPGA Arm===================
17-02-28 20:18:30.897 -08 000000045 INF: ======================================
17-02-28 20:18:30.899 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:30.899 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:30.900 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:30.900 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:30.901 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:30.902 -08 000000050 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:18:30.902 -08 000000105 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:18:30.902 -08 000000050 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:18:30.902 -08 000000050 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:18:30.902 -08 000000050 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:18:30.902 -08 000000105 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:18:30.902 -08 000000050 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:18:30.902 -08 000000105 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:18:30.902 -08 000000105 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:18:30.903 -08 000000105 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:18:31.270 -08 000000047 INF: FPGA: Recv EX2MV
17-02-28 20:18:31.270 -08 000000047 INF: FPGA: Recv EX1MV
17-02-28 20:18:31.270 -08 000000105 INF: Excitation Filter 1: Moved -107 steps in 367.9989 ms
17-02-28 20:18:31.270 -08 000000105 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.1654 ms
17-02-28 20:18:31.270 -08 000000105 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.2836 ms
17-02-28 20:18:31.270 -08 000000105 INF: ======================================
17-02-28 20:18:31.271 -08 000000050 INF: Excitation Filter 2: Moved -107 steps in 369.0477 ms
17-02-28 20:18:31.271 -08 000000050 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.217 ms
17-02-28 20:18:31.271 -08 000000050 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.2881 ms
17-02-28 20:18:31.271 -08 000000050 INF: ======================================
17-02-28 20:18:31.272 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:31.274 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:31.274 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:31.275 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:18:31.275 -08 000000064 INF: ===================FPGA Z Wait===================
17-02-28 20:18:31.275 -08 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:18:31.275 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:18:31.275 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:31.276 -08 000000058 INF: Y Motor: Moving to 14.8311 mm @6.500 mm/sec, started at 64.4794 mm
17-02-28 20:18:31.276 -08 000000036 INF: ===================Camera TDI, Parallel===================
17-02-28 20:18:31.276 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:31.276 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:31.277 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:18:31.277 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:18:31.278 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:31.278 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:31.279 -08 000000085 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:18:31.279 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:31.279 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:31.334 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:31.334 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:31.334 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:31.396 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:31.396 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:31.429 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:31.429 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:31.429 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:31.429 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:31.460 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:31.460 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:31.460 -08 000000058 INF: Y Motor: Set target position to 983108 encoder counts
17-02-28 20:18:31.460 -08 000000058 INF: Y Motor: Xmit s r0xca 983108\r
17-02-28 20:18:31.519 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:31.519 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:18:31.519 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:31.579 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:31.579 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:31.579 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:31.579 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:31.584 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:31.584 -08 000000058 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:18:31.584 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:31.644 -08 000000077 INF: FPGA: Recv ZWAIT 
17-02-28 20:18:31.644 -08 000000064 INF: ======================================
17-02-28 20:18:31.708 -08 000000058 INF: Y Motor: Unshifted Position: 5884135
17-02-28 20:18:31.729 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:31.729 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:31.729 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:31.729 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:31.729 -08 000000033 INF: ===================Camera #0 Frame #5===================
17-02-28 20:18:31.729 -08 000000038 INF: ===================Camera #2 Frame #5===================
17-02-28 20:18:31.758 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:31.884 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:31.902 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:18:31.902 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:18:31.902 -08 000000033 INF: ===================Camera #0 Frame #11===================
17-02-28 20:18:31.903 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:18:31.903 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:18:31.903 -08 000000038 INF: ===================Camera #2 Frame #11===================
17-02-28 20:18:32.022 -08 000000058 INF: Y Motor: Unshifted Position: 5681986
17-02-28 20:18:32.072 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:32.079 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:18:32.079 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:18:32.079 -08 000000033 INF: ===================Camera #0 Frame #18===================
17-02-28 20:18:32.082 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:18:32.082 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:18:32.082 -08 000000038 INF: ===================Camera #2 Frame #18===================
17-02-28 20:18:32.195 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:32.257 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:18:32.257 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:18:32.257 -08 000000033 INF: ===================Camera #0 Frame #24===================
17-02-28 20:18:32.263 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:18:32.263 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:18:32.263 -08 000000038 INF: ===================Camera #2 Frame #24===================
17-02-28 20:18:32.332 -08 000000058 INF: Y Motor: Unshifted Position: 5477675
17-02-28 20:18:32.382 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:32.427 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:18:32.427 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:18:32.427 -08 000000033 INF: ===================Camera #0 Frame #30===================
17-02-28 20:18:32.439 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:18:32.439 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:18:32.439 -08 000000038 INF: ===================Camera #2 Frame #31===================
17-02-28 20:18:32.508 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:32.604 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:18:32.604 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:18:32.604 -08 000000033 INF: ===================Camera #0 Frame #37===================
17-02-28 20:18:32.616 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:18:32.616 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:18:32.616 -08 000000038 INF: ===================Camera #2 Frame #37===================
17-02-28 20:18:32.646 -08 000000058 INF: Y Motor: Unshifted Position: 5276171
17-02-28 20:18:32.696 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:32.779 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:18:32.779 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:18:32.779 -08 000000033 INF: ===================Camera #0 Frame #43===================
17-02-28 20:18:32.791 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:18:32.791 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:18:32.791 -08 000000038 INF: ===================Camera #2 Frame #44===================
17-02-28 20:18:32.818 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:32.947 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:18:32.947 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:18:32.947 -08 000000033 INF: ===================Camera #0 Frame #50===================
17-02-28 20:18:32.956 -08 000000058 INF: Y Motor: Unshifted Position: 5072725
17-02-28 20:18:32.972 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:18:32.972 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:18:32.972 -08 000000038 INF: ===================Camera #2 Frame #50===================
17-02-28 20:18:33.006 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:33.121 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:18:33.121 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:18:33.121 -08 000000033 INF: ===================Camera #0 Frame #56===================
17-02-28 20:18:33.132 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:33.141 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:18:33.141 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:18:33.141 -08 000000038 INF: ===================Camera #2 Frame #57===================
17-02-28 20:18:33.270 -08 000000058 INF: Y Motor: Unshifted Position: 4870358
17-02-28 20:18:33.299 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:18:33.299 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:18:33.299 -08 000000033 INF: ===================Camera #0 Frame #63===================
17-02-28 20:18:33.320 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:33.324 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:18:33.324 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:18:33.324 -08 000000038 INF: ===================Camera #2 Frame #63===================
17-02-28 20:18:33.443 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:33.480 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:18:33.480 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:18:33.480 -08 000000033 INF: ===================Camera #0 Frame #69===================
17-02-28 20:18:33.503 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:18:33.503 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:18:33.503 -08 000000038 INF: ===================Camera #2 Frame #70===================
17-02-28 20:18:33.581 -08 000000058 INF: Y Motor: Unshifted Position: 4666044
17-02-28 20:18:33.631 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:33.655 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:18:33.655 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:18:33.655 -08 000000033 INF: ===================Camera #0 Frame #76===================
17-02-28 20:18:33.685 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:18:33.685 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:18:33.685 -08 000000038 INF: ===================Camera #2 Frame #77===================
17-02-28 20:18:33.754 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:33.835 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:18:33.835 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:18:33.835 -08 000000033 INF: ===================Camera #0 Frame #82===================
17-02-28 20:18:33.863 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:18:33.863 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:18:33.864 -08 000000038 INF: ===================Camera #2 Frame #83===================
17-02-28 20:18:33.893 -08 000000058 INF: Y Motor: Unshifted Position: 4463229
17-02-28 20:18:33.943 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.004 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:18:34.004 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:18:34.004 -08 000000033 INF: ===================Camera #0 Frame #88===================
17-02-28 20:18:34.039 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90.
17-02-28 20:18:34.039 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90
17-02-28 20:18:34.039 -08 000000038 INF: ===================Camera #2 Frame #90===================
17-02-28 20:18:34.066 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.173 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:18:34.173 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:18:34.173 -08 000000033 INF: ===================Camera #0 Frame #95===================
17-02-28 20:18:34.204 -08 000000058 INF: Y Motor: Unshifted Position: 4260870
17-02-28 20:18:34.213 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:18:34.213 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:18:34.213 -08 000000038 INF: ===================Camera #2 Frame #96===================
17-02-28 20:18:34.254 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.345 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:18:34.345 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:18:34.345 -08 000000033 INF: ===================Camera #0 Frame #101===================
17-02-28 20:18:34.380 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.383 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:18:34.383 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:18:34.383 -08 000000038 INF: ===================Camera #2 Frame #102===================
17-02-28 20:18:34.514 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:18:34.514 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:18:34.514 -08 000000033 INF: ===================Camera #0 Frame #107===================
17-02-28 20:18:34.518 -08 000000058 INF: Y Motor: Unshifted Position: 4058708
17-02-28 20:18:34.553 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109.
17-02-28 20:18:34.553 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109
17-02-28 20:18:34.553 -08 000000038 INF: ===================Camera #2 Frame #109===================
17-02-28 20:18:34.568 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.683 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:18:34.683 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:18:34.683 -08 000000033 INF: ===================Camera #0 Frame #113===================
17-02-28 20:18:34.691 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.727 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:18:34.727 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:18:34.727 -08 000000038 INF: ===================Camera #2 Frame #115===================
17-02-28 20:18:34.830 -08 000000058 INF: Y Motor: Unshifted Position: 3854390
17-02-28 20:18:34.851 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:18:34.851 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:18:34.851 -08 000000033 INF: ===================Camera #0 Frame #120===================
17-02-28 20:18:34.880 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.897 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:18:34.897 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:18:34.897 -08 000000038 INF: ===================Camera #2 Frame #121===================
17-02-28 20:18:35.003 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:35.022 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:18:35.022 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:18:35.022 -08 000000033 INF: ===================Camera #0 Frame #126===================
17-02-28 20:18:35.068 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 127, frameCount = 128.
17-02-28 20:18:35.068 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 128
17-02-28 20:18:35.068 -08 000000038 INF: ===================Camera #2 Frame #128===================
17-02-28 20:18:35.141 -08 000000058 INF: Y Motor: Unshifted Position: 3651590
17-02-28 20:18:35.191 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:35.191 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:18:35.191 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:18:35.191 -08 000000033 INF: ===================Camera #0 Frame #132===================
17-02-28 20:18:35.241 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134.
17-02-28 20:18:35.241 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134
17-02-28 20:18:35.241 -08 000000038 INF: ===================Camera #2 Frame #134===================
17-02-28 20:18:35.314 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:35.360 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:18:35.360 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:18:35.360 -08 000000033 INF: ===================Camera #0 Frame #138===================
17-02-28 20:18:35.412 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:18:35.412 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:18:35.412 -08 000000038 INF: ===================Camera #2 Frame #140===================
17-02-28 20:18:35.452 -08 000000058 INF: Y Motor: Unshifted Position: 3449435
17-02-28 20:18:35.502 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:35.530 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:18:35.530 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:18:35.530 -08 000000033 INF: ===================Camera #0 Frame #145===================
17-02-28 20:18:35.583 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 146, frameCount = 147.
17-02-28 20:18:35.583 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 147
17-02-28 20:18:35.583 -08 000000038 INF: ===================Camera #2 Frame #147===================
17-02-28 20:18:35.628 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:35.701 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:18:35.701 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:18:35.701 -08 000000033 INF: ===================Camera #0 Frame #151===================
17-02-28 20:18:35.756 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 152, frameCount = 153.
17-02-28 20:18:35.756 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 153
17-02-28 20:18:35.756 -08 000000038 INF: ===================Camera #2 Frame #153===================
17-02-28 20:18:35.766 -08 000000058 INF: Y Motor: Unshifted Position: 3247076
17-02-28 20:18:35.816 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:35.869 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:18:35.869 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:18:35.869 -08 000000033 INF: ===================Camera #0 Frame #157===================
17-02-28 20:18:35.925 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 158, frameCount = 159.
17-02-28 20:18:35.925 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 159
17-02-28 20:18:35.925 -08 000000038 INF: ===================Camera #2 Frame #159===================
17-02-28 20:18:35.939 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.037 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:18:36.037 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:18:36.037 -08 000000033 INF: ===================Camera #0 Frame #163===================
17-02-28 20:18:36.077 -08 000000058 INF: Y Motor: Unshifted Position: 3042767
17-02-28 20:18:36.097 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 165, frameCount = 166.
17-02-28 20:18:36.097 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 166
17-02-28 20:18:36.097 -08 000000038 INF: ===================Camera #2 Frame #166===================
17-02-28 20:18:36.127 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.206 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:18:36.206 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:18:36.206 -08 000000033 INF: ===================Camera #0 Frame #170===================
17-02-28 20:18:36.251 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.271 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 171, frameCount = 172.
17-02-28 20:18:36.271 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 172
17-02-28 20:18:36.271 -08 000000038 INF: ===================Camera #2 Frame #172===================
17-02-28 20:18:36.378 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:18:36.378 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:18:36.378 -08 000000033 INF: ===================Camera #0 Frame #176===================
17-02-28 20:18:36.389 -08 000000058 INF: Y Motor: Unshifted Position: 2840623
17-02-28 20:18:36.439 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.440 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 177, frameCount = 178.
17-02-28 20:18:36.440 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 178
17-02-28 20:18:36.440 -08 000000038 INF: ===================Camera #2 Frame #178===================
17-02-28 20:18:36.546 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:18:36.546 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:18:36.546 -08 000000033 INF: ===================Camera #0 Frame #182===================
17-02-28 20:18:36.565 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.609 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184.
17-02-28 20:18:36.609 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184
17-02-28 20:18:36.609 -08 000000038 INF: ===================Camera #2 Frame #184===================
17-02-28 20:18:36.703 -08 000000058 INF: Y Motor: Unshifted Position: 2638469
17-02-28 20:18:36.714 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:18:36.714 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:18:36.714 -08 000000033 INF: ===================Camera #0 Frame #188===================
17-02-28 20:18:36.753 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.778 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 190, frameCount = 191.
17-02-28 20:18:36.778 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 191
17-02-28 20:18:36.778 -08 000000038 INF: ===================Camera #2 Frame #191===================
17-02-28 20:18:36.877 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.882 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:18:36.882 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:18:36.882 -08 000000033 INF: ===================Camera #0 Frame #194===================
17-02-28 20:18:36.950 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 196, frameCount = 197.
17-02-28 20:18:36.950 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 197
17-02-28 20:18:36.950 -08 000000038 INF: ===================Camera #2 Frame #197===================
17-02-28 20:18:37.015 -08 000000058 INF: Y Motor: Unshifted Position: 2435463
17-02-28 20:18:37.050 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:18:37.050 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:18:37.050 -08 000000033 INF: ===================Camera #0 Frame #201===================
17-02-28 20:18:37.065 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:37.119 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 202, frameCount = 203.
17-02-28 20:18:37.119 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 203
17-02-28 20:18:37.119 -08 000000038 INF: ===================Camera #2 Frame #203===================
17-02-28 20:18:37.188 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:37.221 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:18:37.221 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:18:37.221 -08 000000033 INF: ===================Camera #0 Frame #207===================
17-02-28 20:18:37.288 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209.
17-02-28 20:18:37.288 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209
17-02-28 20:18:37.288 -08 000000038 INF: ===================Camera #2 Frame #209===================
17-02-28 20:18:37.326 -08 000000058 INF: Y Motor: Unshifted Position: 2231358
17-02-28 20:18:37.376 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:37.389 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:18:37.389 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:18:37.389 -08 000000033 INF: ===================Camera #0 Frame #213===================
17-02-28 20:18:37.457 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 215, frameCount = 216.
17-02-28 20:18:37.457 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 216
17-02-28 20:18:37.457 -08 000000038 INF: ===================Camera #2 Frame #216===================
17-02-28 20:18:37.499 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:37.557 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:18:37.557 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:18:37.557 -08 000000033 INF: ===================Camera #0 Frame #219===================
17-02-28 20:18:37.629 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 221, frameCount = 222.
17-02-28 20:18:37.629 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 222
17-02-28 20:18:37.629 -08 000000038 INF: ===================Camera #2 Frame #222===================
17-02-28 20:18:37.637 -08 000000058 INF: Y Motor: Unshifted Position: 2028989
17-02-28 20:18:37.687 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:37.725 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:18:37.725 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:18:37.725 -08 000000033 INF: ===================Camera #0 Frame #225===================
17-02-28 20:18:37.798 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-02-28 20:18:37.798 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-02-28 20:18:37.798 -08 000000038 INF: ===================Camera #2 Frame #228===================
17-02-28 20:18:37.813 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:37.893 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:18:37.893 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:18:37.893 -08 000000033 INF: ===================Camera #0 Frame #232===================
17-02-28 20:18:37.950 -08 000000058 INF: Y Motor: Unshifted Position: 1825317
17-02-28 20:18:37.967 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-02-28 20:18:37.967 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-02-28 20:18:37.967 -08 000000038 INF: ===================Camera #2 Frame #234===================
17-02-28 20:18:38.000 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.064 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:18:38.064 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:18:38.064 -08 000000033 INF: ===================Camera #0 Frame #238===================
17-02-28 20:18:38.123 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.136 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 240, frameCount = 241.
17-02-28 20:18:38.136 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 241
17-02-28 20:18:38.136 -08 000000038 INF: ===================Camera #2 Frame #241===================
17-02-28 20:18:38.232 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:18:38.232 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:18:38.232 -08 000000033 INF: ===================Camera #0 Frame #244===================
17-02-28 20:18:38.263 -08 000000058 INF: Y Motor: Unshifted Position: 1623173
17-02-28 20:18:38.308 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247.
17-02-28 20:18:38.308 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247
17-02-28 20:18:38.308 -08 000000038 INF: ===================Camera #2 Frame #247===================
17-02-28 20:18:38.313 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.400 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:18:38.400 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:18:38.400 -08 000000033 INF: ===================Camera #0 Frame #250===================
17-02-28 20:18:38.437 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.477 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-02-28 20:18:38.477 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-02-28 20:18:38.477 -08 000000038 INF: ===================Camera #2 Frame #253===================
17-02-28 20:18:38.568 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:18:38.568 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:18:38.568 -08 000000033 INF: ===================Camera #0 Frame #256===================
17-02-28 20:18:38.572 -08 000000058 INF: Y Motor: Unshifted Position: 1420799
17-02-28 20:18:38.622 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.646 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:18:38.646 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:18:38.646 -08 000000038 INF: ===================Camera #2 Frame #259===================
17-02-28 20:18:38.736 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:18:38.736 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:18:38.736 -08 000000033 INF: ===================Camera #0 Frame #263===================
17-02-28 20:18:38.748 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.815 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266.
17-02-28 20:18:38.815 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266
17-02-28 20:18:38.815 -08 000000038 INF: ===================Camera #2 Frame #266===================
17-02-28 20:18:38.884 -08 000000058 INF: Y Motor: Unshifted Position: 1216697
17-02-28 20:18:38.909 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:18:38.909 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:18:38.909 -08 000000033 INF: ===================Camera #0 Frame #269===================
17-02-28 20:18:38.934 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.990 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:18:38.990 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:18:38.990 -08 000000038 INF: ===================Camera #2 Frame #272===================
17-02-28 20:18:39.008 -08 000000030 INF: FPGA: Recv TDIYWAIT
17-02-28 20:18:39.008 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:39.010 -08 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:18:39.011 -08 000000108 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:18:39.011 -08 000000087 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:18:39.011 -08 000000108 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:18:39.011 -08 000000108 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:18:39.011 -08 000000108 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:18:39.011 -08 000000087 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:18:39.011 -08 000000038 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:18:39.011 -08 000000087 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:18:39.011 -08 000000087 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:18:39.011 -08 000000108 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:18:39.012 -08 000000038 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:39.014 -08 000000087 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:18:39.060 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:39.181 -08 000000038 INF: Camera #2 ReleaseBuffer
17-02-28 20:18:39.181 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:18:39.181 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:18:39.181 -08 000000033 INF: ===================Camera #0 Frame #272===================
17-02-28 20:18:39.181 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:18:39.191 -08 000000033 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:18:39.192 -08 000000033 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:39.198 -08 000000058 INF: Y Motor: Unshifted Position: 1013687
17-02-28 20:18:39.214 -08 000000038 INF: ======================================
17-02-28 20:18:39.248 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:39.325 -08 000000033 INF: Camera #0 ReleaseBuffer
17-02-28 20:18:39.325 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:18:39.356 -08 000000033 INF: ======================================
17-02-28 20:18:39.357 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:18:39.359 -08 000000036 INF: ======================================
17-02-28 20:18:39.383 -08 000000069 INF: FPGA: Recv EX2MV
17-02-28 20:18:39.383 -08 000000108 INF: Excitation Filter 2: Moved 107 steps in 372.1336 ms
17-02-28 20:18:39.383 -08 000000108 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.2678 ms
17-02-28 20:18:39.383 -08 000000108 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.3392 ms
17-02-28 20:18:39.384 -08 000000108 INF: ======================================
17-02-28 20:18:39.385 -08 000000058 INF: Y Motor: Unshifted Position: 983107
17-02-28 20:18:39.385 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:39.385 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:39.446 -08 000000050 INF: FPGA: Recv EX1MV
17-02-28 20:18:39.446 -08 000000087 INF: Excitation Filter 1: Moved 107 steps in 434.5649 ms
17-02-28 20:18:39.446 -08 000000087 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 434.6918 ms
17-02-28 20:18:39.446 -08 000000087 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 434.7693 ms
17-02-28 20:18:39.446 -08 000000087 INF: ======================================
17-02-28 20:18:39.447 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:39.447 -08 000000058 INF: Y Motor: Moved to 14.8311 after 7862 ms
17-02-28 20:18:39.447 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:39.447 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:39.448 -08 000000085 INF: ======================================
17-02-28 20:18:39.509 -08 000000058 INF: Y Motor: Recv v 4097\r
17-02-28 20:18:39.509 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:39.509 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:39.570 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:39.570 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:39.570 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:39.635 -08 000000058 INF: Y Motor: Recv v 134217728\r
17-02-28 20:18:39.635 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:18:39.635 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:39.635 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:39.696 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:39.696 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:39.696 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:39.696 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:39.758 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:39.758 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:39.758 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:39.820 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:39.820 -08 000000058 INF: ======================================
17-02-28 20:18:39.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:39.822 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:39.823 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:39.823 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:18:39.882 -08 000000051 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:18:39.882 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:39.944 -08 000000064 INF: FPGA: Recv TDIYERD 1483109
17-02-28 20:18:39.944 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:18:40.005 -08 000000025 INF: FPGA: Recv ZADCR 16873
17-02-28 20:18:40.005 -08 000000018 INF: At scan end Y pos = 14.831 and Z pos = -0.065. Y moved -48.539 mm
17-02-28 20:18:40.005 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:18:40.070 -08 000000085 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:18:40.070 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:18:40.070 -08 000000018 INF: TDIScan finished after 12628.3279 ms
17-02-28 20:18:40.070 -08 000000018 INF: Image[0]: Y should trigger at 63.370 mm, 2nd row was at 64.279 mm (error = 0.909 mm)
17-02-28 20:18:40.070 -08 000000018 INF: Image[2]: Y should trigger at 63.370 mm, 2nd row was at 64.279 mm (error = 0.909 mm)
17-02-28 20:18:40.072 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.106 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.901 um
17-02-28 20:18:40.106 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.107 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:18:40.132 -08 000000089 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:18:40.132 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.133 -08 000000078 INF: ===================Dither Clean Up Command===================
17-02-28 20:18:40.133 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:18:40.133 -08 000000105 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:18:40.133 -08 000000109 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:18:40.134 -08 000000109 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:18:40.134 -08 000000086 INF: ======================================
17-02-28 20:18:40.134 -08 000000109 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:18:40.134 -08 000000105 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:40.134 -08 000000105 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:40.134 -08 000000053 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:18:40.134 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:40.135 -08 000000053 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:18:40.138 -08 000000058 INF: ===================LFT:Extracting coords===================
17-02-28 20:18:40.166 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:40.166 -08 000000058 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:18:40.167 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.167 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.167 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.167 -08 000000072 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.168 -08 000000064 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:40.168 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:40.168 -08 000000072 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:40.168 -08 000000069 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:40.193 -08 000000066 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:40.193 -08 000000066 INF: FPGA: Recv ZSEL 
17-02-28 20:18:40.193 -08 000000053 INF: FPGA: Xmit ZDACW 18059\n
17-02-28 20:18:40.193 -08 000000109 INF: ======================================
17-02-28 20:18:40.195 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:18:40.195 -08 000000105 INF: ======================================
17-02-28 20:18:40.244 -08 000000033 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:40.244 -08 000000072 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:40.244 -08 000000069 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:40.245 -08 000000064 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:40.255 -08 000000051 INF: FPGA: Recv ZDACW 
17-02-28 20:18:40.256 -08 000000053 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:18:40.256 -08 000000053 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:18:40.319 -08 000000105 INF: FPGA: Recv TDIBB
17-02-28 20:18:40.319 -08 000000053 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:18:40.320 -08 000000053 INF: ======================================
17-02-28 20:18:40.395 -08 000000072 INF: LFT found best fwhm score 2.000016 in 151 ms
17-02-28 20:18:40.396 -08 000000072 INF: LFT found good score at index 4149 with fwhm value 2.000016. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:3,B
17-02-28 20:18:40.396 -08 000000033 INF: LFT found best fwhm score 2.001238 in 151 ms
17-02-28 20:18:40.396 -08 000000033 INF: LFT found good score at index 697 with fwhm value 2.001238. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:3,B
17-02-28 20:18:40.396 -08 000000069 INF: LFT found best fwhm score 2.001391 in 152 ms
17-02-28 20:18:40.396 -08 000000069 INF: LFT found good score at index 781 with fwhm value 2.001391. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:3,B
17-02-28 20:18:40.396 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.396 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.396 -08 000000072 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.396 -08 000000033 INF: ======================================
17-02-28 20:18:40.396 -08 000000069 INF: ======================================
17-02-28 20:18:40.396 -08 000000072 INF: ======================================
17-02-28 20:18:40.397 -08 000000064 INF: LFT found best fwhm score 3.402823E+38 in 152 ms
17-02-28 20:18:40.397 -08 000000064 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0483086517878208 in the next cycle, cycle 4 FC:A, C:3,L:3,B
17-02-28 20:18:40.398 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.398 -08 000000064 INF: ======================================
17-02-28 20:18:40.399 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:40.400 -08 000000058 INF: LFT weighted average best Z for bottom surface is at -0.049mm FC:A, C:3,L:3,B
17-02-28 20:18:40.400 -08 000000058 INF: ======================================
17-02-28 20:18:40.401 -08 000000078 INF: ======================================
17-02-28 20:18:40.402 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.403 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:18:40.403 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:18:40.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:18:40.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:18:40.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.405 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494===================
17-02-28 20:18:40.405 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494===================
17-02-28 20:18:40.406 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:18:40.406 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494===================
17-02-28 20:18:40.406 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:18:40.406 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:18:40.428 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:18:40.428 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:40.429 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:40.429 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:40.429 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:18:40.429 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:40.430 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:18:40.478 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.479 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.479 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:40.479 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:40.493 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":3,"Tile":2202,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF186","HCSMMF275","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.573 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:40.573 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.574 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:18:40.574 -08 000000018 INF: Lane 4, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:18:40.574 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.575 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.577 -08 000000010 INF: ===================Move Tilt Motor 1===================
17-02-28 20:18:40.577 -08 000000010 INF: ======================================
17-02-28 20:18:40.579 -08 000000010 INF: ===================Move Tilt Motor 2===================
17-02-28 20:18:40.579 -08 000000010 INF: ======================================
17-02-28 20:18:40.579 -08 000000030 INF: ===================Move Tilt Motor 3===================
17-02-28 20:18:40.580 -08 000000030 INF: ======================================
17-02-28 20:18:40.581 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.582 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.678 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":3,"Tile":2208,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF207","HCSMMF190","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.680 -08 000000018 INF: Transformed XStagePosition from 14.43393 mm to 14.4339303970337 mm.
17-02-28 20:18:40.680 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":3,"Tile":2203,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF243","HCSMMF255","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.682 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":3,"Tile":2207,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF284","HCSMMF201","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.683 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":3,"Tile":2201,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF257","HCSMMF176","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.690 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":3,"Tile":2209,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF282","HCSMMF220","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.692 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":3,"Tile":2210,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF263","HCSMMF239","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.694 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":3,"Tile":2206,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF265","HCSMMF206","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.694 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:18:40.694 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:18:40.694 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:18:40.695 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":3,"Tile":2204,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF272","HCSMMF253","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.696 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:40.697 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":3,"Tile":2211,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF230","HCSMMF199","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.697 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:40.699 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":3,"Tile":2213,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF277","HCSMMF271","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.700 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":3,"Tile":2212,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF184","HCSMMF273","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.701 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":3,"Tile":2205,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF249","HCSMMF187","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.701 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:18:40.702 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:18:40.702 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":3,"Tile":2214,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF244","HCSMMF214","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.702 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:18:40.703 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":3,"Tile":2216,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF232","HCSMMF182","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.704 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":3,"Tile":2219,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF209","HCSMMF196","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.705 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":3,"Tile":2222,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF242","HCSMMF279","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.706 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":3,"Tile":2215,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF266","HCSMMF183","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.707 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":3,"Tile":2218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF254","HCSMMF250","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.709 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":3,"Tile":2220,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF233","HCSMMF234","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.710 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":3,"Tile":2217,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF197","HCSMMF256","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.712 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":3,"Tile":2221,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF237","HCSMMF222","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.714 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":3,"Tile":2224,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF208","HCSMMF217","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.716 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":3,"Tile":2223,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF280","HCSMMF251","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.718 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":3,"Tile":2228,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF269","HCSMMF287","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.721 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":3,"Tile":2226,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF188","HCSMMF228","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.722 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":3,"Tile":2225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF204","HCSMMF252","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.724 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":3,"Tile":2227,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF260","HCSMMF247","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.735 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:40.740 -08 000000081 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:40.740 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:40.741 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:18:40.741 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0689 mm
17-02-28 20:18:40.741 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:18:40.741 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:18:40.803 -08 000000038 INF: FPGA: Recv ZTRG 
17-02-28 20:18:40.803 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:18:40.828 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:40.828 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:18:40.863 -08 000000090 INF: FPGA: Recv ZYT 
17-02-28 20:18:40.863 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:18:40.863 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:18:40.867 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:40.872 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:18:40.929 -08 000000030 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:18:40.929 -08 000000030 INF: FPGA: Recv ZMV 
17-02-28 20:18:40.929 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:18:40.929 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 65.8394 ms
17-02-28 20:18:40.929 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:18:40.973 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:40.979 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:18:40.990 -08 000000075 INF: FPGA: Recv ZDACR 60292
17-02-28 20:18:40.990 -08 000000018 INF: Z Motor: MoveAndTrigger took 249.5186 ms w/comms
17-02-28 20:18:40.990 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:18:40.990 -08 000000018 INF: Z Motor: MoveAbsStepped took 249.6969 ms
17-02-28 20:18:40.991 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:40.991 -08 000000018 INF: Transformed XStagePosition from 14.43393 mm to 14.4339303970337 mm.
17-02-28 20:18:41.000 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:18:41.000 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:41.000 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:41.000 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:18:41.000 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:18:41.052 -08 000000078 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:41.064 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:41.070 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:18:41.073 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:41.073 -08 000000018 INF: Transformed XStagePosition from 14.43393 mm to 14.4339303970337 mm.
17-02-28 20:18:41.082 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:18:41.082 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:41.082 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:41.084 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:41.084 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:18:41.084 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:41.084 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = D_1
17-02-28 20:18:41.085 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:41.085 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:41.086 -08 000000036 INF: ===================MoveEmissionFilters===================
17-02-28 20:18:41.086 -08 000000034 INF: ===================Move X,Y===================
17-02-28 20:18:41.087 -08 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:41.087 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:41.087 -08 000000034 INF: ===================Move X,Y, Parallel===================
17-02-28 20:18:41.087 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:41.087 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:41.088 -08 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:41.088 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:41.088 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:41.088 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:41.089 -08 000000050 INF: ===================Move X Motor without settling===================
17-02-28 20:18:41.089 -08 000000075 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:41.089 -08 000000050 INF: X Motor: Xmit PR VM\n
17-02-28 20:18:41.089 -08 000000075 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8311 mm
17-02-28 20:18:41.089 -08 000000075 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:41.089 -08 000000075 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:41.089 -08 000000039 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:18:41.089 -08 000000057 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:18:41.089 -08 000000108 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:18:41.089 -08 000000081 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:18:41.089 -08 000000087 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:18:41.089 -08 000000085 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:18:41.089 -08 000000073 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:18:41.089 -08 000000039 INF: ======================================
17-02-28 20:18:41.090 -08 000000073 INF: ======================================
17-02-28 20:18:41.090 -08 000000081 INF: ======================================
17-02-28 20:18:41.090 -08 000000087 INF: ======================================
17-02-28 20:18:41.091 -08 000000057 INF: ======================================
17-02-28 20:18:41.091 -08 000000085 INF: ======================================
17-02-28 20:18:41.091 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:41.091 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:41.092 -08 000000010 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:18:41.092 -08 000000010 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:18:41.092 -08 000000058 INF: ======================================
17-02-28 20:18:41.092 -08 000000108 INF: ======================================
17-02-28 20:18:41.093 -08 000000010 INF: ======================================
17-02-28 20:18:41.093 -08 000000086 INF: ======================================
17-02-28 20:18:41.094 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:41.094 -08 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:41.095 -08 000000052 INF: ======================================
17-02-28 20:18:41.095 -08 000000025 INF: ======================================
17-02-28 20:18:41.097 -08 000000036 INF: ======================================
17-02-28 20:18:41.116 -08 000000050 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:18:41.116 -08 000000050 INF: X Motor: Xmit PR VI\n
17-02-28 20:18:41.161 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:41.178 -08 000000050 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:18:41.178 -08 000000075 INF: Y Motor: Recv ok\r
17-02-28 20:18:41.178 -08 000000075 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:41.178 -08 000000050 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:18:41.178 -08 000000075 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:41.178 -08 000000050 INF: X Motor: Moving to 14.4339 mm @15.000 mm/sec, started at 12.2300 mm
17-02-28 20:18:41.178 -08 000000050 INF: X Motor: Xmit MA -18254\n
17-02-28 20:18:41.240 -08 000000050 INF: X Motor: Recv MA -18254\r\n>
17-02-28 20:18:41.240 -08 000000075 INF: Y Motor: Recv ok\r
17-02-28 20:18:41.240 -08 000000075 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:41.240 -08 000000050 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:18:41.302 -08 000000075 INF: Y Motor: Recv v 0\r
17-02-28 20:18:41.302 -08 000000075 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:41.302 -08 000000075 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:18:41.302 -08 000000075 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:18:41.364 -08 000000075 INF: Y Motor: Recv ok\r
17-02-28 20:18:41.364 -08 000000075 INF: Y Motor: Start the move command
17-02-28 20:18:41.364 -08 000000075 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:41.429 -08 000000075 INF: Y Motor: Recv ok\r
17-02-28 20:18:41.429 -08 000000075 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:18:41.429 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:41.439 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:18:41.553 -08 000000075 INF: Y Motor: Unshifted Position: 1068480
17-02-28 20:18:41.603 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:41.727 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:41.863 -08 000000075 INF: Y Motor: Unshifted Position: 1772282
17-02-28 20:18:41.863 -08 000000050 INF: X Motor: Xmit PR ER\n
17-02-28 20:18:41.913 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:41.933 -08 000000050 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:18:41.933 -08 000000050 INF: X Motor: Moved to 14.4346 after 693 ms
17-02-28 20:18:41.933 -08 000000050 INF: ======================================
17-02-28 20:18:42.038 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:42.178 -08 000000075 INF: Y Motor: Unshifted Position: 2557293
17-02-28 20:18:42.228 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:42.351 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:42.487 -08 000000075 INF: Y Motor: Unshifted Position: 3333073
17-02-28 20:18:42.537 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:42.662 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:42.801 -08 000000075 INF: Y Motor: Unshifted Position: 4118973
17-02-28 20:18:42.851 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:42.974 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:43.113 -08 000000075 INF: Y Motor: Unshifted Position: 4898907
17-02-28 20:18:43.163 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:43.288 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:43.423 -08 000000075 INF: Y Motor: Unshifted Position: 5675605
17-02-28 20:18:43.473 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:43.598 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:43.737 -08 000000075 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:18:43.737 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:43.737 -08 000000075 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:43.799 -08 000000075 INF: Y Motor: Recv v 0\r
17-02-28 20:18:43.799 -08 000000075 INF: Y Motor: Moved to 64.4706 after 2370 ms
17-02-28 20:18:43.799 -08 000000075 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:43.861 -08 000000075 INF: Y Motor: Recv v 4096\r
17-02-28 20:18:43.861 -08 000000075 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:43.861 -08 000000075 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:43.926 -08 000000075 INF: Y Motor: Recv v 0\r
17-02-28 20:18:43.926 -08 000000075 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:43.926 -08 000000075 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:43.987 -08 000000075 INF: Y Motor: Recv v 402653184\r
17-02-28 20:18:43.987 -08 000000075 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:18:43.987 -08 000000075 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:43.987 -08 000000075 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:44.051 -08 000000075 INF: Y Motor: Recv v 0\r
17-02-28 20:18:44.051 -08 000000075 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:44.051 -08 000000075 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:44.051 -08 000000075 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:44.110 -08 000000075 INF: Y Motor: Recv ok\r
17-02-28 20:18:44.110 -08 000000075 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:44.110 -08 000000075 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:44.172 -08 000000075 INF: Y Motor: Recv ok\r
17-02-28 20:18:44.172 -08 000000075 INF: ======================================
17-02-28 20:18:44.173 -08 000000034 INF: ===================Move X,Y===================
17-02-28 20:18:44.174 -08 000000034 INF: ======================================
17-02-28 20:18:44.176 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:44.176 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:44.177 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:18:44.177 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:18:44.237 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:44.237 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:18:44.300 -08 000000036 INF: FPGA: Recv ZFREQCL
17-02-28 20:18:44.300 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:18:44.300 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:44.301 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:44.360 -08 000000073 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:18:44.360 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:18:44.361 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:44.361 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:44.362 -08 000000025 INF: ===================TDI Scan Setup===================
17-02-28 20:18:44.362 -08 000000087 INF: ===================Set YMotor gains for scans===================
17-02-28 20:18:44.363 -08 000000087 INF: ======================================
17-02-28 20:18:44.363 -08 000000025 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:18:44.363 -08 000000025 INF: ===================TDI Scan Setup===================
17-02-28 20:18:44.365 -08 000000025 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:18:44.365 -08 000000025 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:18:44.365 -08 000000025 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:18:44.421 -08 000000064 INF: FPGA: Recv TDIYPOS
17-02-28 20:18:44.421 -08 000000025 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:18:44.423 -08 000000025 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:18:44.423 -08 000000025 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:18:44.483 -08 000000053 INF: FPGA: Recv TDIYARM2
17-02-28 20:18:44.484 -08 000000025 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:18:44.486 -08 000000025 INF: ===================TDI Scan Setup===================
17-02-28 20:18:44.487 -08 000000025 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:18:44.487 -08 000000025 INF: ===================TDI Scan Setup===================
17-02-28 20:18:44.489 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:18:44.490 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:18:44.491 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:44.859 -08 000000025 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:18:44.860 -08 000000025 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:18:44.860 -08 000000025 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:44.875 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:18:44.877 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:45.262 -08 000000025 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:18:45.262 -08 000000025 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:18:45.262 -08 000000025 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:45.277 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:18:45.279 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:18:45.280 -08 000000025 INF: ===================TDI Scan Setup===================
17-02-28 20:18:45.281 -08 000000025 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:45.282 -08 000000025 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:18:45.282 -08 000000025 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:45.284 -08 000000025 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:18:45.284 -08 000000025 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:18:45.284 -08 000000025 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:18:45.284 -08 000000025 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:18:45.294 -08 000000089 INF: FPGA: Recv ZYT 
17-02-28 20:18:45.294 -08 000000025 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:18:45.294 -08 000000025 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:18:45.356 -08 000000085 INF: FPGA: Recv ZARM
17-02-28 20:18:45.356 -08 000000025 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.7865 ms
17-02-28 20:18:45.356 -08 000000025 INF: Z Motor: ArmAbsStepped took 72.0977 ms
17-02-28 20:18:45.357 -08 000000025 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:45.358 -08 000000025 INF: ===================TDI Scan Setup===================
17-02-28 20:18:45.359 -08 000000025 INF: ======================================
17-02-28 20:18:45.360 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:45.361 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:45.361 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:45.362 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:45.362 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:45.363 -08 000000086 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:18:45.363 -08 000000064 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:18:45.364 -08 000000086 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:18:45.364 -08 000000086 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:18:45.364 -08 000000086 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:18:45.364 -08 000000064 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:18:45.364 -08 000000086 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:18:45.364 -08 000000064 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:18:45.364 -08 000000064 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:18:45.367 -08 000000064 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:18:45.731 -08 000000050 INF: FPGA: Recv EX2MV
17-02-28 20:18:45.731 -08 000000050 INF: FPGA: Recv EX1MV
17-02-28 20:18:45.731 -08 000000064 INF: Excitation Filter 1: Moved -107 steps in 367.0933 ms
17-02-28 20:18:45.731 -08 000000064 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.3659 ms
17-02-28 20:18:45.731 -08 000000064 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.4898 ms
17-02-28 20:18:45.731 -08 000000086 INF: Excitation Filter 2: Moved -107 steps in 367.3462 ms
17-02-28 20:18:45.731 -08 000000086 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.7773 ms
17-02-28 20:18:45.731 -08 000000086 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.8662 ms
17-02-28 20:18:45.732 -08 000000064 INF: ======================================
17-02-28 20:18:45.732 -08 000000086 INF: ======================================
17-02-28 20:18:45.733 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:45.735 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:45.736 -08 000000045 INF: ===================Serial===================
17-02-28 20:18:45.736 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:18:45.737 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:45.737 -08 000000078 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:45.737 -08 000000045 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:18:45.737 -08 000000078 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:18:45.737 -08 000000089 INF: ===================Camera TDI, Parallel===================
17-02-28 20:18:45.737 -08 000000078 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:45.737 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:45.738 -08 000000047 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:18:45.738 -08 000000045 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:18:45.739 -08 000000047 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:18:45.739 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:18:45.739 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:18:45.740 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:45.740 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:45.741 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:45.741 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:45.795 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:18:45.795 -08 000000078 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:45.795 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:45.857 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:18:45.857 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:45.890 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:45.890 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:45.891 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:45.891 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:45.919 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:18:45.919 -08 000000078 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:45.919 -08 000000078 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:18:45.919 -08 000000078 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:18:45.983 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:18:45.983 -08 000000078 INF: Y Motor: Start the move command
17-02-28 20:18:45.983 -08 000000078 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:46.040 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:46.040 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:46.041 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:46.041 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:46.044 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:18:46.044 -08 000000078 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:18:46.044 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.171 -08 000000078 INF: Y Motor: Unshifted Position: 5929184
17-02-28 20:18:46.190 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:46.190 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:46.191 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:46.191 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:46.221 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.341 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:18:46.341 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:18:46.341 -08 000000090 INF: ===================Camera #0 Frame #1===================
17-02-28 20:18:46.342 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:18:46.342 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:18:46.342 -08 000000101 INF: ===================Camera #2 Frame #1===================
17-02-28 20:18:46.346 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.482 -08 000000078 INF: Y Motor: Unshifted Position: 5882180
17-02-28 20:18:46.494 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:18:46.494 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:18:46.494 -08 000000090 INF: ===================Camera #0 Frame #3===================
17-02-28 20:18:46.497 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:18:46.497 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:18:46.497 -08 000000101 INF: ===================Camera #2 Frame #3===================
17-02-28 20:18:46.532 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.651 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:18:46.651 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:18:46.652 -08 000000090 INF: ===================Camera #0 Frame #4===================
17-02-28 20:18:46.653 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:18:46.653 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:18:46.653 -08 000000101 INF: ===================Camera #2 Frame #4===================
17-02-28 20:18:46.659 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.795 -08 000000078 INF: Y Motor: Unshifted Position: 5835174
17-02-28 20:18:46.807 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:46.807 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:46.807 -08 000000101 INF: ===================Camera #2 Frame #5===================
17-02-28 20:18:46.808 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:46.808 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:46.808 -08 000000090 INF: ===================Camera #0 Frame #5===================
17-02-28 20:18:46.845 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.855 -08 000000039 INF: FPGA: Recv ZWAIT 
17-02-28 20:18:46.855 -08 000000039 INF: FPGA: Recv TDIYWAIT
17-02-28 20:18:46.855 -08 000000045 INF: ===================Serial===================
17-02-28 20:18:46.856 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:46.857 -08 000000045 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:18:46.857 -08 000000047 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:18:46.857 -08 000000045 INF: ===================Serial===================
17-02-28 20:18:46.858 -08 000000053 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:18:46.858 -08 000000035 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:18:46.858 -08 000000053 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:18:46.859 -08 000000053 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:18:46.859 -08 000000053 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:18:46.859 -08 000000035 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:18:46.859 -08 000000053 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:18:46.859 -08 000000035 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:18:46.859 -08 000000035 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:18:46.859 -08 000000045 INF: ======================================
17-02-28 20:18:46.860 -08 000000035 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:18:46.960 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:18:46.960 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:18:46.960 -08 000000101 INF: ===================Camera #2 Frame #6===================
17-02-28 20:18:46.961 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:18:46.961 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:18:46.961 -08 000000090 INF: ===================Camera #0 Frame #6===================
17-02-28 20:18:46.963 -08 000000101 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:18:46.964 -08 000000090 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:18:46.964 -08 000000101 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:46.965 -08 000000090 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:46.969 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.991 -08 000000101 INF: Camera #2 ReleaseBuffer
17-02-28 20:18:46.991 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:18:46.992 -08 000000101 INF: ======================================
17-02-28 20:18:47.016 -08 000000090 INF: Camera #0 ReleaseBuffer
17-02-28 20:18:47.016 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:18:47.018 -08 000000090 INF: ======================================
17-02-28 20:18:47.020 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:18:47.022 -08 000000089 INF: ======================================
17-02-28 20:18:47.108 -08 000000078 INF: Y Motor: Unshifted Position: 5790763
17-02-28 20:18:47.158 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:47.230 -08 000000072 INF: FPGA: Recv EX1MV
17-02-28 20:18:47.230 -08 000000072 INF: FPGA: Recv EX2MV
17-02-28 20:18:47.230 -08 000000053 INF: Excitation Filter 1: Moved 107 steps in 371.4424 ms
17-02-28 20:18:47.230 -08 000000053 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.574 ms
17-02-28 20:18:47.230 -08 000000053 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.658 ms
17-02-28 20:18:47.230 -08 000000035 INF: Excitation Filter 2: Moved 107 steps in 371.3124 ms
17-02-28 20:18:47.230 -08 000000035 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8352 ms
17-02-28 20:18:47.230 -08 000000035 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.91 ms
17-02-28 20:18:47.231 -08 000000053 INF: ======================================
17-02-28 20:18:47.231 -08 000000035 INF: ======================================
17-02-28 20:18:47.232 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:47.233 -08 000000047 INF: ======================================
17-02-28 20:18:47.294 -08 000000078 INF: Y Motor: Unshifted Position: 5790745
17-02-28 20:18:47.294 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:47.294 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:47.357 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:18:47.357 -08 000000078 INF: Y Motor: Moved to 62.9075 after 1312 ms
17-02-28 20:18:47.357 -08 000000078 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:47.419 -08 000000078 INF: Y Motor: Recv v 4097\r
17-02-28 20:18:47.419 -08 000000078 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:47.419 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:47.481 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:18:47.481 -08 000000078 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:47.481 -08 000000078 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:47.543 -08 000000078 INF: Y Motor: Recv v 134217728\r
17-02-28 20:18:47.543 -08 000000078 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:18:47.543 -08 000000078 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:47.543 -08 000000078 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:47.605 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:18:47.605 -08 000000078 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:47.605 -08 000000078 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:47.605 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:47.667 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:18:47.667 -08 000000078 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:47.667 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:47.732 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:18:47.732 -08 000000078 INF: ======================================
17-02-28 20:18:47.733 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:47.735 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:47.735 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:47.736 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:18:47.792 -08 000000090 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:18:47.792 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:47.854 -08 000000108 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:18:47.854 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:18:47.916 -08 000000064 INF: FPGA: Recv ZADCR 2425
17-02-28 20:18:47.916 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:18:47.916 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:18:47.978 -08 000000053 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:18:47.978 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:18:47.978 -08 000000018 INF: TDIScan finished after 6904.4339 ms
17-02-28 20:18:47.978 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:18:47.978 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:18:47.978 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:18:48.040 -08 000000109 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:18:48.041 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.041 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.042 -08 000000087 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:18:48.042 -08 000000047 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:18:48.043 -08 000000060 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:18:48.043 -08 000000047 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:48.043 -08 000000047 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:48.043 -08 000000087 INF: ======================================
17-02-28 20:18:48.043 -08 000000060 INF: ======================================
17-02-28 20:18:48.104 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:18:48.104 -08 000000047 INF: ======================================
17-02-28 20:18:48.105 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.106 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.107 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:18:48.155 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.155 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:18:48.190 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.190 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:18:48.230 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.230 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:18:48.270 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.270 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:48.270 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:48.271 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:18:48.279 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:48.279 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:18:48.279 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:18:48.914 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:18:48.936 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0494461203072321Best Z position at top surface = -0.120388349514563Best Z position at top surface + compensator offset = -0.0976883495145631 C:3,L:4,B
17-02-28 20:18:48.938 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.120388349514563
17-02-28 20:18:48.938 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.72318
17-02-28 20:18:48.938 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0494461203072321
17-02-28 20:18:48.938 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.38162
17-02-28 20:18:48.938 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0494461203072321.
17-02-28 20:18:48.938 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:49.071 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:18:49.071 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:18:49.100 -08 000000064 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:49.100 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:49.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.102 -08 000000018 INF: Lane 4, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:18:49.102 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.103 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.103 -08 000000057 INF: ===================Move Tilt Motor 2===================
17-02-28 20:18:49.103 -08 000000025 INF: ===================Move Tilt Motor 1===================
17-02-28 20:18:49.104 -08 000000051 INF: ===================Move Tilt Motor 3===================
17-02-28 20:18:49.104 -08 000000025 INF: ======================================
17-02-28 20:18:49.104 -08 000000051 INF: ======================================
17-02-28 20:18:49.105 -08 000000057 INF: ======================================
17-02-28 20:18:49.106 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.106 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.107 -08 000000018 INF: ETF Best Z: -0.04944612 mm (12962 DAC)
17-02-28 20:18:49.107 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.108 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.108 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:18:49.108 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.109 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.115 -08 000000018 INF: Swath 1 position calculated to be: {X=13.86234, Y=39.70494} from estimated center X= 14.357, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:18:49.115 -08 000000018 INF: Swath 2 position calculated to be: {X=14.97034, Y=39.70494} from estimated center X= 14.357, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:18:49.544 -08 000000018 INF: Swath 0: Converted transform from (94.98832, -37.32796) pixels to (0.032775, -0.012765) mm.
17-02-28 20:18:49.550 -08 000000018 INF: Swath 1: Converted transform from (74.5028, -34.32217) pixels to (0.025875, -0.01173) mm.
17-02-28 20:18:49.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494===================
17-02-28 20:18:49.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494===================
17-02-28 20:18:49.551 -08 000000018 INF: Transformed XStagePosition from 13.86234 mm to 13.8951102048159 mm.
17-02-28 20:18:49.563 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4821807401031 mm.
17-02-28 20:18:49.563 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2821807401031 mm.
17-02-28 20:18:49.563 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3729307401031 mm.
17-02-28 20:18:49.565 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:49.565 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:18:49.565 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:49.566 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = D_1
17-02-28 20:18:49.572 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:49.572 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:49.573 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:18:49.573 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:49.573 -08 000000077 INF: ===================MoveEmissionFilters===================
17-02-28 20:18:49.574 -08 000000105 INF: ===================Move X,Y, Parallel===================
17-02-28 20:18:49.574 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:18:49.574 -08 000000053 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:18:49.574 -08 000000053 INF: Z Motor: Moving to -0.0694 mm, started at -0.0100 mm
17-02-28 20:18:49.574 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:49.574 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:49.574 -08 000000053 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:18:49.574 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:49.574 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:49.575 -08 000000073 INF: ===================Move X Motor without settling===================
17-02-28 20:18:49.575 -08 000000073 INF: X Motor: Xmit PR VM\n
17-02-28 20:18:49.575 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:49.575 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:49.575 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:49.575 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:49.575 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:49.576 -08 000000058 INF: Y Motor: Moving to 64.4822 mm @25.000 mm/sec, started at 62.9075 mm
17-02-28 20:18:49.576 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:49.576 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:49.576 -08 000000081 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:18:49.576 -08 000000078 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:18:49.576 -08 000000047 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:18:49.576 -08 000000030 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:18:49.576 -08 000000078 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:18:49.576 -08 000000010 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:18:49.576 -08 000000090 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:18:49.576 -08 000000108 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:18:49.576 -08 000000081 INF: ======================================
17-02-28 20:18:49.577 -08 000000090 INF: ======================================
17-02-28 20:18:49.577 -08 000000108 INF: ======================================
17-02-28 20:18:49.577 -08 000000030 INF: ======================================
17-02-28 20:18:49.577 -08 000000047 INF: ======================================
17-02-28 20:18:49.578 -08 000000010 INF: ======================================
17-02-28 20:18:49.578 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:49.579 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:49.579 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:18:49.579 -08 000000078 INF: ======================================
17-02-28 20:18:49.579 -08 000000057 INF: ======================================
17-02-28 20:18:49.580 -08 000000087 INF: ======================================
17-02-28 20:18:49.580 -08 000000025 INF: ======================================
17-02-28 20:18:49.580 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:49.581 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:49.582 -08 000000069 INF: ======================================
17-02-28 20:18:49.582 -08 000000051 INF: ======================================
17-02-28 20:18:49.583 -08 000000077 INF: ======================================
17-02-28 20:18:49.601 -08 000000066 INF: FPGA: Recv ZTRG 
17-02-28 20:18:49.601 -08 000000053 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:18:49.603 -08 000000073 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:18:49.603 -08 000000073 INF: X Motor: Xmit PR VI\n
17-02-28 20:18:49.603 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:49.603 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:49.603 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:49.663 -08 000000051 INF: FPGA: Recv ZYT 
17-02-28 20:18:49.663 -08 000000053 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:18:49.663 -08 000000053 INF: FPGA: Xmit ZMV 18205\n
17-02-28 20:18:49.665 -08 000000073 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:18:49.665 -08 000000073 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:18:49.665 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:49.665 -08 000000073 INF: X Motor: Moving to 13.8951 mm @15.000 mm/sec, started at 14.4346 mm
17-02-28 20:18:49.665 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:49.665 -08 000000073 INF: X Motor: Xmit MA -18475\n
17-02-28 20:18:49.726 -08 000000072 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:18:49.726 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:18:49.727 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:49.727 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:49.727 -08 000000073 INF: X Motor: Recv MA -18475\r\n>
17-02-28 20:18:49.727 -08 000000058 INF: Y Motor: Set target position to 5948218 encoder counts
17-02-28 20:18:49.727 -08 000000058 INF: Y Motor: Xmit s r0xca 5948218\r
17-02-28 20:18:49.727 -08 000000073 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:18:49.787 -08 000000060 INF: FPGA: Recv ZMV 
17-02-28 20:18:49.787 -08 000000053 INF: Z Motor: MoveAndTrigger 'ZMV' command took 124.0656 ms
17-02-28 20:18:49.787 -08 000000053 INF: FPGA: Xmit ZDACR\n
17-02-28 20:18:49.791 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:49.791 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:18:49.791 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:49.849 -08 000000052 INF: FPGA: Recv ZDACR 18205
17-02-28 20:18:49.849 -08 000000053 INF: Z Motor: MoveAndTrigger took 274.8483 ms w/comms
17-02-28 20:18:49.849 -08 000000053 INF: Z Motor: After move to -0.0694, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:18:49.849 -08 000000053 INF: Z Motor: MoveAbsStepped took 275.0855 ms
17-02-28 20:18:49.850 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:49.851 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:49.851 -08 000000058 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:18:49.851 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:49.851 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:18:49.852 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:18:49.852 -08 000000064 INF: ===================Camera Arm TDI===================
17-02-28 20:18:49.853 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:49.853 -08 000000064 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:49.853 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:18:49.854 -08 000000064 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:49.854 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:49.854 -08 000000087 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:18:49.914 -08 000000057 INF: FPGA: Recv ZSEL 
17-02-28 20:18:49.915 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:49.915 -08 000000087 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:18:49.976 -08 000000010 INF: FPGA: Recv TDIBB
17-02-28 20:18:49.976 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:49.977 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:18:49.978 -08 000000058 INF: Y Motor: Unshifted Position: 5873049
17-02-28 20:18:49.978 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:49.979 -08 000000087 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:18:49.979 -08 000000087 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:18:49.980 -08 000000087 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:18:50.028 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:50.037 -08 000000108 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:50.037 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:50.039 -08 000000087 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:18:50.039 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:50.041 -08 000000087 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:18:50.041 -08 000000087 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:18:50.041 -08 000000087 INF: Z Motor: Arming to move to -0.0294 mm
17-02-28 20:18:50.041 -08 000000087 INF: FPGA: Xmit ZYT 6428218 4\n
17-02-28 20:18:50.099 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:18:50.099 -08 000000087 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6373049 enc / 63.730 mm / ) = 6428218 enc / 64.282 mm
17-02-28 20:18:50.099 -08 000000087 INF: FPGA: Xmit ZARM 7719\n
17-02-28 20:18:50.151 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:50.161 -08 000000077 INF: FPGA: Recv ZARM
17-02-28 20:18:50.161 -08 000000087 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8572 ms
17-02-28 20:18:50.161 -08 000000087 INF: Z Motor: ArmAbsStepped took 119.9292 ms
17-02-28 20:18:50.161 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:50.163 -08 000000073 INF: X Motor: Xmit PR ER\n
17-02-28 20:18:50.163 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:18:50.164 -08 000000087 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:18:50.165 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:18:50.166 -08 000000087 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:18:50.166 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:18:50.168 -08 000000087 INF: ======================================
17-02-28 20:18:50.228 -08 000000073 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:18:50.228 -08 000000073 INF: X Motor: Moved to 13.8950 after 500 ms
17-02-28 20:18:50.228 -08 000000073 INF: ======================================
17-02-28 20:18:50.290 -08 000000058 INF: Y Motor: Unshifted Position: 5948219
17-02-28 20:18:50.290 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:50.290 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:50.352 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:50.352 -08 000000058 INF: Y Motor: Moved to 64.4822 after 501 ms
17-02-28 20:18:50.352 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:50.414 -08 000000058 INF: Y Motor: Recv v 4096\r
17-02-28 20:18:50.414 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:50.414 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:50.476 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:50.476 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:50.476 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:50.538 -08 000000058 INF: Y Motor: Recv v 402653184\r
17-02-28 20:18:50.538 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:18:50.538 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:50.538 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:50.600 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:50.600 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:50.600 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:50.600 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:50.662 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:50.662 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:50.662 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:50.727 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:50.727 -08 000000058 INF: ======================================
17-02-28 20:18:50.728 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:18:50.729 -08 000000105 INF: ======================================
17-02-28 20:18:50.796 -08 000000064 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:18:50.796 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:18:50.796 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:50.811 -08 000000064 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:50.813 -08 000000064 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:51.835 -08 000000064 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:18:51.835 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:18:51.836 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:51.851 -08 000000064 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:51.853 -08 000000064 INF: ===================Camera Arm TDI===================
17-02-28 20:18:51.854 -08 000000064 INF: ======================================
17-02-28 20:18:51.855 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:51.856 -08 000000053 INF: ======================================
17-02-28 20:18:51.857 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:51.858 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:51.858 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:18:51.858 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:18:51.911 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:51.911 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:18:51.971 -08 000000090 INF: FPGA: Recv ZFREQCL
17-02-28 20:18:51.971 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:18:51.971 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:51.971 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:52.034 -08 000000025 INF: FPGA: Recv TDIYERD 6448219
17-02-28 20:18:52.034 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448219 counts (64.482 mm)
17-02-28 20:18:52.034 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:52.035 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:52.035 -08 000000051 INF: ===================TDI FPGA Arm===================
17-02-28 20:18:52.035 -08 000000060 INF: ===================Set YMotor gains for scans===================
17-02-28 20:18:52.036 -08 000000060 INF: ======================================
17-02-28 20:18:52.036 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:52.037 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:18:52.037 -08 000000051 INF: FPGA: Xmit TDIYPOS 6337293\n
17-02-28 20:18:52.096 -08 000000072 INF: FPGA: Recv TDIYPOS
17-02-28 20:18:52.096 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:52.097 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:18:52.098 -08 000000051 INF: FPGA: Xmit TDIYARM3 139264 6428218 1 1\n
17-02-28 20:18:52.158 -08 000000035 INF: FPGA: Recv TDIYARM3
17-02-28 20:18:52.158 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:52.159 -08 000000051 INF: ===================TDI FPGA Arm===================
17-02-28 20:18:52.160 -08 000000051 INF: ======================================
17-02-28 20:18:52.161 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:52.162 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:52.162 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:52.163 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:52.163 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:52.164 -08 000000109 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:18:52.164 -08 000000075 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:18:52.164 -08 000000109 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:18:52.164 -08 000000109 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:18:52.164 -08 000000109 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:18:52.164 -08 000000109 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:18:52.164 -08 000000075 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:18:52.164 -08 000000075 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:18:52.164 -08 000000075 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:18:52.165 -08 000000075 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:18:52.533 -08 000000057 INF: FPGA: Recv EX2MV
17-02-28 20:18:52.533 -08 000000057 INF: FPGA: Recv EX1MV
17-02-28 20:18:52.533 -08 000000109 INF: Excitation Filter 2: Moved -107 steps in 368.7368 ms
17-02-28 20:18:52.533 -08 000000075 INF: Excitation Filter 1: Moved -107 steps in 368.6136 ms
17-02-28 20:18:52.533 -08 000000109 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.8402 ms
17-02-28 20:18:52.533 -08 000000109 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.9448 ms
17-02-28 20:18:52.533 -08 000000075 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.7433 ms
17-02-28 20:18:52.533 -08 000000075 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.9246 ms
17-02-28 20:18:52.533 -08 000000109 INF: ======================================
17-02-28 20:18:52.533 -08 000000075 INF: ======================================
17-02-28 20:18:52.534 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:52.535 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:52.536 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:18:52.536 -08 000000077 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:52.536 -08 000000069 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:52.536 -08 000000066 INF: ===================FPGA Z Wait===================
17-02-28 20:18:52.536 -08 000000066 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:18:52.537 -08 000000069 INF: Y Motor: Moving to 14.8338 mm @6.500 mm/sec, started at 64.4822 mm
17-02-28 20:18:52.537 -08 000000101 INF: ===================Camera TDI, Parallel===================
17-02-28 20:18:52.537 -08 000000069 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:52.537 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:52.537 -08 000000077 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:18:52.538 -08 000000078 INF: ===================Camera TDI===================
17-02-28 20:18:52.538 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:18:52.539 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:52.539 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:52.540 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:52.540 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:52.543 -08 000000077 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:18:52.597 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:18:52.597 -08 000000069 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:52.597 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:52.660 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:18:52.660 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:52.690 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:52.690 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:52.690 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:52.690 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:52.724 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:18:52.724 -08 000000069 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:52.724 -08 000000069 INF: Y Motor: Set target position to 983384 encoder counts
17-02-28 20:18:52.724 -08 000000069 INF: Y Motor: Xmit s r0xca 983384\r
17-02-28 20:18:52.786 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:18:52.786 -08 000000069 INF: Y Motor: Start the move command
17-02-28 20:18:52.786 -08 000000069 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:52.840 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:52.840 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:52.840 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:52.840 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:52.849 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:18:52.849 -08 000000069 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:18:52.849 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:52.908 -08 000000045 INF: FPGA: Recv ZWAIT 
17-02-28 20:18:52.908 -08 000000066 INF: ======================================
17-02-28 20:18:52.972 -08 000000069 INF: Y Motor: Unshifted Position: 5886578
17-02-28 20:18:52.990 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:18:52.990 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:18:52.990 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:18:52.990 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:18:52.990 -08 000000078 INF: ===================Camera #0 Frame #4===================
17-02-28 20:18:52.990 -08 000000052 INF: ===================Camera #2 Frame #4===================
17-02-28 20:18:53.022 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.150 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.152 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:18:53.152 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:18:53.152 -08 000000078 INF: ===================Camera #0 Frame #10===================
17-02-28 20:18:53.153 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:18:53.153 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:18:53.153 -08 000000052 INF: ===================Camera #2 Frame #10===================
17-02-28 20:18:53.284 -08 000000069 INF: Y Motor: Unshifted Position: 5683561
17-02-28 20:18:53.320 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:18:53.320 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:18:53.320 -08 000000078 INF: ===================Camera #0 Frame #17===================
17-02-28 20:18:53.322 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:18:53.322 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:18:53.322 -08 000000052 INF: ===================Camera #2 Frame #17===================
17-02-28 20:18:53.334 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.458 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.491 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:18:53.491 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:18:53.491 -08 000000078 INF: ===================Camera #0 Frame #23===================
17-02-28 20:18:53.494 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:18:53.494 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:18:53.494 -08 000000052 INF: ===================Camera #2 Frame #23===================
17-02-28 20:18:53.597 -08 000000069 INF: Y Motor: Unshifted Position: 5480122
17-02-28 20:18:53.647 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.659 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:18:53.659 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:18:53.659 -08 000000078 INF: ===================Camera #0 Frame #29===================
17-02-28 20:18:53.663 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:18:53.663 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:18:53.663 -08 000000052 INF: ===================Camera #2 Frame #29===================
17-02-28 20:18:53.772 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.827 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:18:53.827 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:18:53.827 -08 000000078 INF: ===================Camera #0 Frame #35===================
17-02-28 20:18:53.832 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:18:53.832 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:18:53.832 -08 000000052 INF: ===================Camera #2 Frame #35===================
17-02-28 20:18:53.907 -08 000000069 INF: Y Motor: Unshifted Position: 5278400
17-02-28 20:18:53.957 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.995 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41.
17-02-28 20:18:53.995 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41
17-02-28 20:18:53.995 -08 000000078 INF: ===================Camera #0 Frame #41===================
17-02-28 20:18:54.001 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:18:54.001 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:18:54.001 -08 000000052 INF: ===================Camera #2 Frame #42===================
17-02-28 20:18:54.084 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:54.163 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:18:54.163 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:18:54.163 -08 000000078 INF: ===================Camera #0 Frame #48===================
17-02-28 20:18:54.174 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:18:54.174 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:18:54.174 -08 000000052 INF: ===================Camera #2 Frame #48===================
17-02-28 20:18:54.221 -08 000000069 INF: Y Motor: Unshifted Position: 5074085
17-02-28 20:18:54.271 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:54.335 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:18:54.335 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:18:54.335 -08 000000078 INF: ===================Camera #0 Frame #54===================
17-02-28 20:18:54.344 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:18:54.344 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:18:54.344 -08 000000052 INF: ===================Camera #2 Frame #54===================
17-02-28 20:18:54.395 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:54.504 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:18:54.504 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:18:54.504 -08 000000078 INF: ===================Camera #0 Frame #60===================
17-02-28 20:18:54.514 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:18:54.514 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:18:54.514 -08 000000052 INF: ===================Camera #2 Frame #61===================
17-02-28 20:18:54.531 -08 000000069 INF: Y Motor: Unshifted Position: 4872583
17-02-28 20:18:54.581 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:54.673 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-02-28 20:18:54.673 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-02-28 20:18:54.673 -08 000000078 INF: ===================Camera #0 Frame #66===================
17-02-28 20:18:54.687 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:18:54.687 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:18:54.687 -08 000000052 INF: ===================Camera #2 Frame #67===================
17-02-28 20:18:54.708 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:54.842 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:18:54.842 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:18:54.842 -08 000000078 INF: ===================Camera #0 Frame #73===================
17-02-28 20:18:54.844 -08 000000069 INF: Y Motor: Unshifted Position: 4668920
17-02-28 20:18:54.858 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:18:54.858 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:18:54.858 -08 000000052 INF: ===================Camera #2 Frame #73===================
17-02-28 20:18:54.894 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.014 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:18:55.014 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:18:55.015 -08 000000078 INF: ===================Camera #0 Frame #79===================
17-02-28 20:18:55.018 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.028 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:18:55.028 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:18:55.028 -08 000000052 INF: ===================Camera #2 Frame #80===================
17-02-28 20:18:55.157 -08 000000069 INF: Y Motor: Unshifted Position: 4465455
17-02-28 20:18:55.184 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:18:55.184 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:18:55.184 -08 000000078 INF: ===================Camera #0 Frame #85===================
17-02-28 20:18:55.201 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:18:55.201 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:18:55.201 -08 000000052 INF: ===================Camera #2 Frame #86===================
17-02-28 20:18:55.207 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.331 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.354 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:18:55.354 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:18:55.354 -08 000000078 INF: ===================Camera #0 Frame #92===================
17-02-28 20:18:55.371 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:18:55.371 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:18:55.371 -08 000000052 INF: ===================Camera #2 Frame #92===================
17-02-28 20:18:55.469 -08 000000069 INF: Y Motor: Unshifted Position: 4263738
17-02-28 20:18:55.519 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.527 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:18:55.527 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:18:55.527 -08 000000078 INF: ===================Camera #0 Frame #98===================
17-02-28 20:18:55.541 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:18:55.541 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:18:55.541 -08 000000052 INF: ===================Camera #2 Frame #98===================
17-02-28 20:18:55.644 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.696 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:18:55.696 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:18:55.696 -08 000000078 INF: ===================Camera #0 Frame #104===================
17-02-28 20:18:55.711 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:18:55.711 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:18:55.711 -08 000000052 INF: ===================Camera #2 Frame #105===================
17-02-28 20:18:55.780 -08 000000069 INF: Y Motor: Unshifted Position: 4060286
17-02-28 20:18:55.830 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.865 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:18:55.865 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:18:55.865 -08 000000078 INF: ===================Camera #0 Frame #110===================
17-02-28 20:18:55.885 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:18:55.885 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:18:55.885 -08 000000052 INF: ===================Camera #2 Frame #111===================
17-02-28 20:18:55.954 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.035 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:18:56.035 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:18:56.035 -08 000000078 INF: ===================Camera #0 Frame #117===================
17-02-28 20:18:56.056 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:18:56.056 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:18:56.056 -08 000000052 INF: ===================Camera #2 Frame #117===================
17-02-28 20:18:56.093 -08 000000069 INF: Y Motor: Unshifted Position: 3856620
17-02-28 20:18:56.143 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.208 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:18:56.208 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:18:56.208 -08 000000078 INF: ===================Camera #0 Frame #123===================
17-02-28 20:18:56.227 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:18:56.227 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:18:56.227 -08 000000052 INF: ===================Camera #2 Frame #124===================
17-02-28 20:18:56.269 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.378 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:18:56.378 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:18:56.378 -08 000000078 INF: ===================Camera #0 Frame #129===================
17-02-28 20:18:56.403 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:18:56.403 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:18:56.403 -08 000000052 INF: ===================Camera #2 Frame #130===================
17-02-28 20:18:56.405 -08 000000069 INF: Y Motor: Unshifted Position: 3654467
17-02-28 20:18:56.455 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.546 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:18:56.546 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:18:56.546 -08 000000078 INF: ===================Camera #0 Frame #135===================
17-02-28 20:18:56.573 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:18:56.573 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:18:56.573 -08 000000052 INF: ===================Camera #2 Frame #136===================
17-02-28 20:18:56.577 -08 000000064 INF: RunCopyService queue size at 2/28/2017 8:18:56 PM is 2
17-02-28 20:18:56.579 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.716 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:18:56.716 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:18:56.716 -08 000000078 INF: ===================Camera #0 Frame #142===================
17-02-28 20:18:56.718 -08 000000069 INF: Y Motor: Unshifted Position: 3450798
17-02-28 20:18:56.743 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:18:56.743 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:18:56.743 -08 000000052 INF: ===================Camera #2 Frame #143===================
17-02-28 20:18:56.768 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.888 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:18:56.888 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:18:56.888 -08 000000078 INF: ===================Camera #0 Frame #148===================
17-02-28 20:18:56.892 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.917 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:18:56.917 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:18:56.917 -08 000000052 INF: ===================Camera #2 Frame #149===================
17-02-28 20:18:57.028 -08 000000069 INF: Y Motor: Unshifted Position: 3249304
17-02-28 20:18:57.058 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:18:57.058 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:18:57.058 -08 000000078 INF: ===================Camera #0 Frame #154===================
17-02-28 20:18:57.078 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:57.088 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:18:57.088 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:18:57.088 -08 000000052 INF: ===================Camera #2 Frame #155===================
17-02-28 20:18:57.205 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:57.228 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:18:57.228 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:18:57.228 -08 000000078 INF: ===================Camera #0 Frame #160===================
17-02-28 20:18:57.259 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:18:57.259 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:18:57.259 -08 000000052 INF: ===================Camera #2 Frame #162===================
17-02-28 20:18:57.341 -08 000000069 INF: Y Motor: Unshifted Position: 3045640
17-02-28 20:18:57.391 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:57.398 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:18:57.398 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:18:57.398 -08 000000078 INF: ===================Camera #0 Frame #167===================
17-02-28 20:18:57.433 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:18:57.433 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:18:57.433 -08 000000052 INF: ===================Camera #2 Frame #168===================
17-02-28 20:18:57.515 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:57.571 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:18:57.571 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:18:57.571 -08 000000078 INF: ===================Camera #0 Frame #173===================
17-02-28 20:18:57.604 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:18:57.604 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:18:57.604 -08 000000052 INF: ===================Camera #2 Frame #174===================
17-02-28 20:18:57.655 -08 000000069 INF: Y Motor: Unshifted Position: 2844144
17-02-28 20:18:57.705 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:57.741 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:18:57.741 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:18:57.741 -08 000000078 INF: ===================Camera #0 Frame #179===================
17-02-28 20:18:57.775 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:18:57.775 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:18:57.775 -08 000000052 INF: ===================Camera #2 Frame #181===================
17-02-28 20:18:57.829 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:57.911 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:18:57.911 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:18:57.911 -08 000000078 INF: ===================Camera #0 Frame #186===================
17-02-28 20:18:57.949 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:18:57.949 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:18:57.949 -08 000000052 INF: ===================Camera #2 Frame #187===================
17-02-28 20:18:57.965 -08 000000069 INF: Y Motor: Unshifted Position: 2639822
17-02-28 20:18:58.015 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.084 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:18:58.084 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:18:58.084 -08 000000078 INF: ===================Camera #0 Frame #192===================
17-02-28 20:18:58.120 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:18:58.120 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:18:58.120 -08 000000052 INF: ===================Camera #2 Frame #193===================
17-02-28 20:18:58.139 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.254 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:18:58.254 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:18:58.254 -08 000000078 INF: ===================Camera #0 Frame #198===================
17-02-28 20:18:58.279 -08 000000069 INF: Y Motor: Unshifted Position: 2438343
17-02-28 20:18:58.291 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:18:58.291 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:18:58.291 -08 000000052 INF: ===================Camera #2 Frame #200===================
17-02-28 20:18:58.329 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.424 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:18:58.424 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:18:58.424 -08 000000078 INF: ===================Camera #0 Frame #205===================
17-02-28 20:18:58.453 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.465 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:18:58.465 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:18:58.465 -08 000000052 INF: ===================Camera #2 Frame #206===================
17-02-28 20:18:58.589 -08 000000069 INF: Y Motor: Unshifted Position: 2234015
17-02-28 20:18:58.597 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:18:58.597 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:18:58.597 -08 000000078 INF: ===================Camera #0 Frame #211===================
17-02-28 20:18:58.635 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:18:58.635 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:18:58.635 -08 000000052 INF: ===================Camera #2 Frame #212===================
17-02-28 20:18:58.639 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.763 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.767 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:18:58.768 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:18:58.768 -08 000000078 INF: ===================Camera #0 Frame #217===================
17-02-28 20:18:58.806 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:18:58.806 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:18:58.806 -08 000000052 INF: ===================Camera #2 Frame #219===================
17-02-28 20:18:58.903 -08 000000069 INF: Y Motor: Unshifted Position: 2032301
17-02-28 20:18:58.936 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:18:58.936 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:18:58.936 -08 000000078 INF: ===================Camera #0 Frame #223===================
17-02-28 20:18:58.953 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.980 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:18:58.980 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:18:58.980 -08 000000052 INF: ===================Camera #2 Frame #225===================
17-02-28 20:18:59.077 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:59.106 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:18:59.106 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:18:59.106 -08 000000078 INF: ===================Camera #0 Frame #230===================
17-02-28 20:18:59.151 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:18:59.151 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:18:59.151 -08 000000052 INF: ===================Camera #2 Frame #231===================
17-02-28 20:18:59.215 -08 000000069 INF: Y Motor: Unshifted Position: 1828197
17-02-28 20:18:59.265 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:59.279 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:18:59.279 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:18:59.279 -08 000000078 INF: ===================Camera #0 Frame #236===================
17-02-28 20:18:59.322 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:18:59.322 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:18:59.322 -08 000000052 INF: ===================Camera #2 Frame #238===================
17-02-28 20:18:59.389 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:59.449 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:18:59.449 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:18:59.449 -08 000000078 INF: ===================Camera #0 Frame #242===================
17-02-28 20:18:59.496 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:18:59.496 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:18:59.496 -08 000000052 INF: ===================Camera #2 Frame #244===================
17-02-28 20:18:59.525 -08 000000069 INF: Y Motor: Unshifted Position: 1625401
17-02-28 20:18:59.575 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:59.619 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:18:59.619 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:18:59.619 -08 000000078 INF: ===================Camera #0 Frame #249===================
17-02-28 20:18:59.667 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:18:59.667 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:18:59.667 -08 000000052 INF: ===================Camera #2 Frame #250===================
17-02-28 20:18:59.699 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:59.792 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:18:59.792 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:18:59.792 -08 000000078 INF: ===================Camera #0 Frame #255===================
17-02-28 20:18:59.838 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:18:59.838 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:18:59.838 -08 000000052 INF: ===================Camera #2 Frame #257===================
17-02-28 20:18:59.839 -08 000000069 INF: Y Motor: Unshifted Position: 1423674
17-02-28 20:18:59.889 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:59.962 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:18:59.962 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:18:59.962 -08 000000078 INF: ===================Camera #0 Frame #261===================
17-02-28 20:19:00.013 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:00.013 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:19:00.013 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:19:00.013 -08 000000052 INF: ===================Camera #2 Frame #263===================
17-02-28 20:19:00.132 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:19:00.132 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:19:00.132 -08 000000078 INF: ===================Camera #0 Frame #267===================
17-02-28 20:19:00.148 -08 000000069 INF: Y Motor: Unshifted Position: 1219573
17-02-28 20:19:00.184 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:19:00.184 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:19:00.184 -08 000000052 INF: ===================Camera #2 Frame #269===================
17-02-28 20:19:00.198 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:00.273 -08 000000081 INF: FPGA: Recv TDIYWAIT
17-02-28 20:19:00.273 -08 000000077 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:00.275 -08 000000077 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:19:00.276 -08 000000073 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:19:00.276 -08 000000035 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:19:00.276 -08 000000073 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:19:00.276 -08 000000073 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:19:00.276 -08 000000073 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:19:00.276 -08 000000035 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:19:00.276 -08 000000073 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:19:00.276 -08 000000035 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:19:00.276 -08 000000035 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:19:00.279 -08 000000035 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:19:00.301 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:00.301 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:00.301 -08 000000078 INF: ===================Camera #0 Frame #272===================
17-02-28 20:19:00.317 -08 000000078 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:00.318 -08 000000078 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:00.325 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:00.461 -08 000000069 INF: Y Motor: Unshifted Position: 1016555
17-02-28 20:19:00.480 -08 000000078 INF: Camera #0 ReleaseBuffer
17-02-28 20:19:00.480 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:00.480 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:00.480 -08 000000052 INF: ===================Camera #2 Frame #272===================
17-02-28 20:19:00.480 -08 000000078 INF: ===================Camera TDI===================
17-02-28 20:19:00.489 -08 000000052 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:00.490 -08 000000052 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:00.511 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:00.513 -08 000000078 INF: ======================================
17-02-28 20:19:00.645 -08 000000090 INF: FPGA: Recv EX2MV
17-02-28 20:19:00.645 -08 000000073 INF: Excitation Filter 2: Moved 107 steps in 368.9166 ms
17-02-28 20:19:00.645 -08 000000073 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.0626 ms
17-02-28 20:19:00.645 -08 000000073 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.1326 ms
17-02-28 20:19:00.646 -08 000000073 INF: ======================================
17-02-28 20:19:00.647 -08 000000069 INF: Y Motor: Unshifted Position: 983384
17-02-28 20:19:00.647 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:00.647 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:00.689 -08 000000052 INF: Camera #2 ReleaseBuffer
17-02-28 20:19:00.689 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:19:00.708 -08 000000057 INF: FPGA: Recv EX1MV
17-02-28 20:19:00.708 -08 000000035 INF: Excitation Filter 1: Moved 107 steps in 431.3886 ms
17-02-28 20:19:00.708 -08 000000035 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 431.5266 ms
17-02-28 20:19:00.708 -08 000000035 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 431.6083 ms
17-02-28 20:19:00.708 -08 000000035 INF: ======================================
17-02-28 20:19:00.709 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:00.709 -08 000000069 INF: Y Motor: Moved to 14.8338 after 7860 ms
17-02-28 20:19:00.709 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:00.709 -08 000000077 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:00.710 -08 000000077 INF: ======================================
17-02-28 20:19:00.723 -08 000000052 INF: ======================================
17-02-28 20:19:00.724 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:19:00.725 -08 000000101 INF: ======================================
17-02-28 20:19:00.775 -08 000000069 INF: Y Motor: Recv v 4097\r
17-02-28 20:19:00.775 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:00.775 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:00.834 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:00.834 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:00.834 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:00.899 -08 000000069 INF: Y Motor: Recv v 134217728\r
17-02-28 20:19:00.899 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:19:00.899 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:00.899 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:00.961 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:00.961 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:00.961 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:00.961 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:01.023 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:01.023 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:01.023 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:01.085 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:01.085 -08 000000069 INF: ======================================
17-02-28 20:19:01.086 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:01.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:01.088 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.088 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:19:01.144 -08 000000086 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:19:01.144 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:01.206 -08 000000089 INF: FPGA: Recv TDIYERD 1483385
17-02-28 20:19:01.206 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:19:01.271 -08 000000039 INF: FPGA: Recv ZADCR 17175
17-02-28 20:19:01.271 -08 000000018 INF: At scan end Y pos = 14.834 and Z pos = -0.066. Y moved -48.539 mm
17-02-28 20:19:01.271 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:19:01.333 -08 000000051 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:19:01.333 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:19:01.333 -08 000000018 INF: TDIScan finished after 11781.0677 ms
17-02-28 20:19:01.333 -08 000000018 INF: Image[0]: Y should trigger at 63.373 mm, 2nd row was at 64.282 mm (error = 0.909 mm)
17-02-28 20:19:01.333 -08 000000018 INF: Image[2]: Y should trigger at 63.373 mm, 2nd row was at 64.282 mm (error = 0.909 mm)
17-02-28 20:19:01.335 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.368 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.909 um
17-02-28 20:19:01.368 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.369 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:19:01.395 -08 000000060 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:19:01.396 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.396 -08 000000035 INF: ===================Dither Clean Up Command===================
17-02-28 20:19:01.396 -08 000000108 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:19:01.396 -08 000000052 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:19:01.396 -08 000000025 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:19:01.396 -08 000000052 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:01.397 -08 000000052 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:01.397 -08 000000025 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:19:01.397 -08 000000025 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:19:01.397 -08 000000108 INF: ======================================
17-02-28 20:19:01.397 -08 000000085 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:01.397 -08 000000064 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:01.398 -08 000000085 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:19:01.400 -08 000000064 INF: ===================LFT:Extracting coords===================
17-02-28 20:19:01.425 -08 000000064 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:01.426 -08 000000064 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:19:01.427 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.427 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.427 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.427 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.427 -08 000000082 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:01.427 -08 000000057 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:01.427 -08 000000051 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:01.427 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:01.457 -08 000000069 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:01.457 -08 000000069 INF: FPGA: Recv ZSEL 
17-02-28 20:19:01.457 -08 000000085 INF: FPGA: Xmit ZDACW 18205\n
17-02-28 20:19:01.457 -08 000000025 INF: ======================================
17-02-28 20:19:01.459 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:01.459 -08 000000052 INF: ======================================
17-02-28 20:19:01.503 -08 000000082 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:01.504 -08 000000057 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:01.504 -08 000000051 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:01.504 -08 000000033 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:01.519 -08 000000010 INF: FPGA: Recv ZDACW 
17-02-28 20:19:01.519 -08 000000085 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:19:01.519 -08 000000085 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:19:01.581 -08 000000047 INF: FPGA: Recv TDIBB
17-02-28 20:19:01.581 -08 000000085 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:01.582 -08 000000085 INF: ======================================
17-02-28 20:19:01.655 -08 000000082 INF: LFT found best fwhm score 2.023821 in 151 ms
17-02-28 20:19:01.655 -08 000000082 INF: LFT found good score at index 8577 with fwhm value 2.023821. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:4,B
17-02-28 20:19:01.655 -08 000000057 INF: LFT found best fwhm score 2.000459 in 151 ms
17-02-28 20:19:01.655 -08 000000057 INF: LFT found good score at index 713 with fwhm value 2.000459. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:4,B
17-02-28 20:19:01.655 -08 000000051 INF: LFT found best fwhm score 2.000367 in 151 ms
17-02-28 20:19:01.655 -08 000000033 INF: LFT found best fwhm score 2.000358 in 151 ms
17-02-28 20:19:01.655 -08 000000051 INF: LFT found good score at index 7753 with fwhm value 2.000367. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:4,B
17-02-28 20:19:01.655 -08 000000033 INF: LFT found good score at index 697 with fwhm value 2.000358. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:4,B
17-02-28 20:19:01.655 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.655 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.655 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.655 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.655 -08 000000057 INF: ======================================
17-02-28 20:19:01.655 -08 000000082 INF: ======================================
17-02-28 20:19:01.656 -08 000000033 INF: ======================================
17-02-28 20:19:01.656 -08 000000051 INF: ======================================
17-02-28 20:19:01.657 -08 000000064 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:01.658 -08 000000064 INF: LFT weighted average best Z for bottom surface is at -0.049mm FC:A, C:3,L:4,B
17-02-28 20:19:01.658 -08 000000064 INF: ======================================
17-02-28 20:19:01.659 -08 000000035 INF: ======================================
17-02-28 20:19:01.660 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.661 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:19:01.661 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.661 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:19:01.661 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.662 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:19:01.662 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.662 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:19:01.662 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.662 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494===================
17-02-28 20:19:01.663 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494===================
17-02-28 20:19:01.663 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:19:01.663 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494===================
17-02-28 20:19:01.664 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:19:01.664 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:19:01.687 -08 000000018 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:19:01.687 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:19:01.687 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494===================
17-02-28 20:19:01.687 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:01.687 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494===================
17-02-28 20:19:01.688 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:19:01.688 -08 000000018 INF: Transformed XStagePosition from 14.97034 mm to 14.996210006997 mm.
17-02-28 20:19:01.699 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4832157393694 mm.
17-02-28 20:19:01.699 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2832157393694 mm.
17-02-28 20:19:01.700 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3739657393694 mm.
17-02-28 20:19:01.702 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.702 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:19:01.702 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.703 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -69.4 um, section = D_1
17-02-28 20:19:01.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:01.705 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:01.707 -08 000000075 INF: ===================MoveEmissionFilters===================
17-02-28 20:19:01.728 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":4,"Tile":2101,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF228","HCSMMF212","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.747 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:01.747 -08 000000105 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:01.747 -08 000000108 INF: ===================Move X,Y===================
17-02-28 20:19:01.748 -08 000000082 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:01.748 -08 000000089 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:01.748 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:01.748 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:01.755 -08 000000108 INF: ===================Move X,Y, Parallel===================
17-02-28 20:19:01.755 -08 000000089 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:01.757 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:01.757 -08 000000105 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:01.759 -08 000000082 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:19:01.759 -08 000000082 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:19:01.759 -08 000000010 INF: ===================Move X Motor without settling===================
17-02-28 20:19:01.759 -08 000000082 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:01.759 -08 000000010 INF: X Motor: Xmit PR VM\n
17-02-28 20:19:01.760 -08 000000086 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:19:01.760 -08 000000066 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:19:01.760 -08 000000101 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:19:01.760 -08 000000101 INF: ======================================
17-02-28 20:19:01.760 -08 000000086 INF: ======================================
17-02-28 20:19:01.761 -08 000000082 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:19:01.761 -08 000000066 INF: ======================================
17-02-28 20:19:01.762 -08 000000101 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:19:01.762 -08 000000086 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:01.762 -08 000000086 INF: Y Motor: Moving to 64.4832 mm @25.000 mm/sec, started at 14.8338 mm
17-02-28 20:19:01.763 -08 000000034 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:19:01.763 -08 000000086 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:01.763 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:01.763 -08 000000101 INF: ======================================
17-02-28 20:19:01.763 -08 000000066 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:19:01.763 -08 000000053 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:19:01.763 -08 000000066 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:19:01.763 -08 000000034 INF: ======================================
17-02-28 20:19:01.763 -08 000000053 INF: ======================================
17-02-28 20:19:01.763 -08 000000077 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:19:01.764 -08 000000066 INF: ======================================
17-02-28 20:19:01.764 -08 000000060 INF: ===================TDI Scan Setup===================
17-02-28 20:19:01.764 -08 000000077 INF: ======================================
17-02-28 20:19:01.764 -08 000000089 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:01.765 -08 000000101 INF: ===================Camera Arm TDI===================
17-02-28 20:19:01.765 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:01.765 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:01.765 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:01.766 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:01.766 -08 000000089 INF: ======================================
17-02-28 20:19:01.766 -08 000000025 INF: ======================================
17-02-28 20:19:01.766 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:01.767 -08 000000060 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:01.768 -08 000000036 INF: ======================================
17-02-28 20:19:01.768 -08 000000060 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:01.768 -08 000000060 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:19:01.769 -08 000000105 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:01.770 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":4,"Tile":2102,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF260","HCSMMF188","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.770 -08 000000105 INF: ======================================
17-02-28 20:19:01.771 -08 000000075 INF: ======================================
17-02-28 20:19:01.818 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":4,"Tile":2104,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF195","HCSMMF269","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.822 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":4,"Tile":2103,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF287","HCSMMF241","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.825 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":4,"Tile":2108,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF253","HCSMMF246","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.828 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":4,"Tile":2106,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF282","HCSMMF220","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.837 -08 000000073 INF: FPGA: Recv ZSEL 
17-02-28 20:19:01.839 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:01.839 -08 000000086 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:01.839 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:01.839 -08 000000060 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:01.839 -08 000000060 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:19:01.840 -08 000000010 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:19:01.840 -08 000000010 INF: X Motor: Xmit PR VI\n
17-02-28 20:19:01.890 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":4,"Tile":2110,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF276","HCSMMF263","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.891 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":4,"Tile":2107,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF285","HCSMMF189","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.893 -08 000000051 INF: FPGA: Recv TDIBB
17-02-28 20:19:01.893 -08 000000060 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:01.894 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":4,"Tile":2109,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF245","HCSMMF221","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.894 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":4,"Tile":2105,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF274","HCSMMF176","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.895 -08 000000010 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:19:01.895 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:01.895 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:01.895 -08 000000010 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:19:01.895 -08 000000060 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:01.895 -08 000000010 INF: X Motor: Moving to 14.9962 mm @15.000 mm/sec, started at 13.8950 mm
17-02-28 20:19:01.895 -08 000000010 INF: X Motor: Xmit MA -18024\n
17-02-28 20:19:01.895 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:01.895 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":4,"Tile":2112,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF194","HCSMMF267","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.896 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":4,"Tile":2111,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF272","HCSMMF217","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.897 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":4,"Tile":2116,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF235","HCSMMF191","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.897 -08 000000060 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:19:01.897 -08 000000060 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:19:01.897 -08 000000060 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:19:01.897 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":4,"Tile":2117,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF183","HCSMMF200","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.899 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":4,"Tile":2114,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF280","HCSMMF256","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.900 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":4,"Tile":2120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF227","HCSMMF261","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.903 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":4,"Tile":2115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF273","HCSMMF206","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.904 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":4,"Tile":2118,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF199","HCSMMF181","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.905 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":4,"Tile":2119,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF230","HCSMMF240","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.905 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":4,"Tile":2113,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF266","HCSMMF184","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.907 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":4,"Tile":2121,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF225","HCSMMF249","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.908 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":4,"Tile":2123,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF182","HCSMMF178","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.909 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":4,"Tile":2124,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF233","HCSMMF218","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.909 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":4,"Tile":2125,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF275","HCSMMF201","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.911 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":4,"Tile":2127,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF185","HCSMMF202","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.911 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":4,"Tile":2128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF203","HCSMMF238","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.912 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":4,"Tile":2126,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF193","HCSMMF236","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.914 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":4,"Tile":2122,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF216","HCSMMF187","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.917 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:01.923 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:19:01.955 -08 000000030 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:01.955 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:01.957 -08 000000010 INF: X Motor: Recv MA -18024\r\n>
17-02-28 20:19:01.957 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:01.957 -08 000000086 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:01.957 -08 000000010 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:19:01.957 -08 000000086 INF: Y Motor: Set target position to 5948322 encoder counts
17-02-28 20:19:01.957 -08 000000086 INF: Y Motor: Xmit s r0xca 5948322\r
17-02-28 20:19:01.957 -08 000000060 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:19:01.957 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:01.959 -08 000000060 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:19:01.959 -08 000000060 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:19:01.959 -08 000000060 INF: Z Motor: Arming to move to -0.0294 mm
17-02-28 20:19:01.959 -08 000000060 INF: FPGA: Xmit ZYT 6428322 4\n
17-02-28 20:19:02.017 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:02.017 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:19:02.022 -08 000000085 INF: FPGA: Recv ZYT 
17-02-28 20:19:02.022 -08 000000060 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1483384 enc / 14.834 mm / ) = 6428322 enc / 64.283 mm
17-02-28 20:19:02.022 -08 000000060 INF: FPGA: Xmit ZARM 7719\n
17-02-28 20:19:02.023 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:02.023 -08 000000086 INF: Y Motor: Start the move command
17-02-28 20:19:02.023 -08 000000086 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:02.077 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:02.080 -08 000000105 INF: FPGA: Recv ZARM
17-02-28 20:19:02.080 -08 000000060 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 58.1529 ms
17-02-28 20:19:02.080 -08 000000060 INF: Z Motor: ArmAbsStepped took 120.6754 ms
17-02-28 20:19:02.080 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:02.082 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:02.082 -08 000000060 INF: ===================TDI Scan Setup===================
17-02-28 20:19:02.082 -08 000000086 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:19:02.082 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:02.083 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:19:02.083 -08 000000060 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:19:02.084 -08 000000060 INF: ===================TDI Scan Setup===================
17-02-28 20:19:02.085 -08 000000060 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:19:02.086 -08 000000060 INF: ===================TDI Scan Setup===================
17-02-28 20:19:02.087 -08 000000060 INF: ======================================
17-02-28 20:19:02.179 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:02.185 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:19:02.207 -08 000000086 INF: Y Motor: Unshifted Position: 1061064
17-02-28 20:19:02.257 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:02.295 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:02.301 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:19:02.363 -08 000000101 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:02.363 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:02.363 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:02.378 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:02.380 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:02.382 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:02.418 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:02.521 -08 000000086 INF: Y Motor: Unshifted Position: 1762547
17-02-28 20:19:02.571 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:02.583 -08 000000010 INF: X Motor: Xmit PR ER\n
17-02-28 20:19:02.645 -08 000000010 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:19:02.645 -08 000000010 INF: X Motor: Moved to 14.9961 after 688 ms
17-02-28 20:19:02.645 -08 000000010 INF: ======================================
17-02-28 20:19:02.695 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:02.705 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:19:02.831 -08 000000086 INF: Y Motor: Unshifted Position: 2545891
17-02-28 20:19:02.881 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:02.978 -08 000000101 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:02.978 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:02.978 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:02.993 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:02.995 -08 000000101 INF: ===================Camera Arm TDI===================
17-02-28 20:19:02.996 -08 000000101 INF: ======================================
17-02-28 20:19:02.998 -08 000000082 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:02.999 -08 000000082 INF: ======================================
17-02-28 20:19:03.009 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:03.145 -08 000000086 INF: Y Motor: Unshifted Position: 3323362
17-02-28 20:19:03.195 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:03.321 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:03.459 -08 000000086 INF: Y Motor: Unshifted Position: 4104250
17-02-28 20:19:03.509 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:03.631 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:03.768 -08 000000086 INF: Y Motor: Unshifted Position: 4886680
17-02-28 20:19:03.818 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:03.945 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:04.081 -08 000000086 INF: Y Motor: Unshifted Position: 5666561
17-02-28 20:19:04.131 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:04.254 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:04.393 -08 000000086 INF: Y Motor: Unshifted Position: 5948324
17-02-28 20:19:04.443 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:04.579 -08 000000086 INF: Y Motor: Unshifted Position: 5948323
17-02-28 20:19:04.579 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:04.579 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:04.641 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:04.641 -08 000000086 INF: Y Motor: Moved to 64.4832 after 2559 ms
17-02-28 20:19:04.641 -08 000000086 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:04.704 -08 000000086 INF: Y Motor: Recv v 4096\r
17-02-28 20:19:04.704 -08 000000086 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:04.704 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:04.767 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:04.767 -08 000000086 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:04.767 -08 000000086 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:04.831 -08 000000086 INF: Y Motor: Recv v 402653184\r
17-02-28 20:19:04.831 -08 000000086 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:19:04.831 -08 000000086 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:04.831 -08 000000086 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:04.890 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:04.890 -08 000000086 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:04.890 -08 000000086 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:04.890 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:04.954 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:04.954 -08 000000086 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:04.954 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:05.017 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:05.017 -08 000000086 INF: ======================================
17-02-28 20:19:05.018 -08 000000108 INF: ===================Move X,Y===================
17-02-28 20:19:05.019 -08 000000108 INF: ======================================
17-02-28 20:19:05.021 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:05.021 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:05.022 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:19:05.022 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:19:05.079 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:05.079 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:19:05.139 -08 000000051 INF: FPGA: Recv ZFREQCL
17-02-28 20:19:05.140 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:19:05.140 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:05.140 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:05.200 -08 000000035 INF: FPGA: Recv TDIYERD 6448323
17-02-28 20:19:05.200 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448323 counts (64.483 mm)
17-02-28 20:19:05.201 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:05.201 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:05.202 -08 000000030 INF: ===================TDI FPGA Arm===================
17-02-28 20:19:05.202 -08 000000050 INF: ===================Set YMotor gains for scans===================
17-02-28 20:19:05.202 -08 000000050 INF: ======================================
17-02-28 20:19:05.203 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:05.203 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:19:05.203 -08 000000030 INF: FPGA: Xmit TDIYPOS 6337397\n
17-02-28 20:19:05.262 -08 000000078 INF: FPGA: Recv TDIYPOS
17-02-28 20:19:05.262 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:05.264 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:19:05.264 -08 000000030 INF: FPGA: Xmit TDIYARM3 139264 6428322 1 1\n
17-02-28 20:19:05.327 -08 000000069 INF: FPGA: Recv TDIYARM3
17-02-28 20:19:05.327 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:05.329 -08 000000030 INF: ===================TDI FPGA Arm===================
17-02-28 20:19:05.330 -08 000000030 INF: ======================================
17-02-28 20:19:05.331 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:05.332 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:05.332 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:05.333 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:05.334 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:05.335 -08 000000047 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:19:05.335 -08 000000047 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:19:05.335 -08 000000047 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:19:05.335 -08 000000047 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:19:05.335 -08 000000047 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:19:05.335 -08 000000053 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:19:05.335 -08 000000053 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:19:05.335 -08 000000053 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:19:05.335 -08 000000053 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:19:05.336 -08 000000053 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:19:05.761 -08 000000045 INF: FPGA: Recv EX2MV
17-02-28 20:19:05.761 -08 000000045 INF: FPGA: Recv EX1MV
17-02-28 20:19:05.761 -08 000000053 INF: Excitation Filter 1: Moved -107 steps in 425.7857 ms
17-02-28 20:19:05.761 -08 000000047 INF: Excitation Filter 2: Moved -107 steps in 426.3552 ms
17-02-28 20:19:05.761 -08 000000053 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 425.9579 ms
17-02-28 20:19:05.761 -08 000000047 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 426.511 ms
17-02-28 20:19:05.761 -08 000000047 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 426.6178 ms
17-02-28 20:19:05.762 -08 000000053 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 426.1137 ms
17-02-28 20:19:05.762 -08 000000047 INF: ======================================
17-02-28 20:19:05.762 -08 000000053 INF: ======================================
17-02-28 20:19:05.763 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:05.764 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:05.765 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:19:05.765 -08 000000033 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:05.765 -08 000000078 INF: ===================FPGA Z Wait===================
17-02-28 20:19:05.766 -08 000000050 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:05.766 -08 000000078 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:19:05.766 -08 000000075 INF: ===================Camera TDI, Parallel===================
17-02-28 20:19:05.766 -08 000000050 INF: Y Motor: Moving to 14.8349 mm @6.500 mm/sec, started at 64.4832 mm
17-02-28 20:19:05.766 -08 000000050 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:05.766 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:05.766 -08 000000033 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:19:05.767 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:19:05.767 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:19:05.769 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:05.769 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:05.769 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:05.769 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:05.770 -08 000000033 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:19:05.828 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:19:05.828 -08 000000050 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:05.828 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:05.890 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:19:05.890 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:05.919 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:05.919 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:05.919 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:05.919 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:05.952 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:19:05.952 -08 000000050 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:05.952 -08 000000050 INF: Y Motor: Set target position to 983488 encoder counts
17-02-28 20:19:05.952 -08 000000050 INF: Y Motor: Xmit s r0xca 983488\r
17-02-28 20:19:06.014 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:19:06.014 -08 000000050 INF: Y Motor: Start the move command
17-02-28 20:19:06.014 -08 000000050 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:06.069 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:06.069 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:06.069 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:06.069 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:06.078 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:19:06.078 -08 000000050 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:19:06.078 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:06.136 -08 000000073 INF: FPGA: Recv ZWAIT 
17-02-28 20:19:06.136 -08 000000078 INF: ======================================
17-02-28 20:19:06.200 -08 000000050 INF: Y Motor: Unshifted Position: 5886683
17-02-28 20:19:06.219 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:19:06.219 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:06.219 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:19:06.219 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:06.219 -08 000000085 INF: ===================Camera #2 Frame #5===================
17-02-28 20:19:06.219 -08 000000034 INF: ===================Camera #0 Frame #5===================
17-02-28 20:19:06.250 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:06.376 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:06.392 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:19:06.392 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:19:06.392 -08 000000034 INF: ===================Camera #0 Frame #11===================
17-02-28 20:19:06.393 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:19:06.393 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:19:06.393 -08 000000085 INF: ===================Camera #2 Frame #11===================
17-02-28 20:19:06.515 -08 000000050 INF: Y Motor: Unshifted Position: 5682369
17-02-28 20:19:06.560 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:19:06.560 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:19:06.560 -08 000000034 INF: ===================Camera #0 Frame #17===================
17-02-28 20:19:06.565 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:06.571 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:19:06.571 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:19:06.571 -08 000000085 INF: ===================Camera #2 Frame #17===================
17-02-28 20:19:06.689 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:06.730 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:19:06.730 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:19:06.730 -08 000000034 INF: ===================Camera #0 Frame #23===================
17-02-28 20:19:06.745 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:19:06.745 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:19:06.745 -08 000000085 INF: ===================Camera #2 Frame #24===================
17-02-28 20:19:06.825 -08 000000050 INF: Y Motor: Unshifted Position: 5480872
17-02-28 20:19:06.875 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:06.898 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:19:06.898 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:19:06.898 -08 000000034 INF: ===================Camera #0 Frame #29===================
17-02-28 20:19:06.927 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:19:06.927 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:19:06.927 -08 000000085 INF: ===================Camera #2 Frame #31===================
17-02-28 20:19:07.003 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.076 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:19:07.076 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:19:07.076 -08 000000034 INF: ===================Camera #0 Frame #36===================
17-02-28 20:19:07.108 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:19:07.108 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:19:07.108 -08 000000085 INF: ===================Camera #2 Frame #37===================
17-02-28 20:19:07.138 -08 000000050 INF: Y Motor: Unshifted Position: 5277203
17-02-28 20:19:07.188 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.256 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:19:07.256 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:19:07.256 -08 000000034 INF: ===================Camera #0 Frame #43===================
17-02-28 20:19:07.286 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:19:07.286 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:19:07.286 -08 000000085 INF: ===================Camera #2 Frame #44===================
17-02-28 20:19:07.312 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.428 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:19:07.428 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:19:07.428 -08 000000034 INF: ===================Camera #0 Frame #49===================
17-02-28 20:19:07.451 -08 000000050 INF: Y Motor: Unshifted Position: 5071810
17-02-28 20:19:07.459 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:19:07.459 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:19:07.459 -08 000000085 INF: ===================Camera #2 Frame #50===================
17-02-28 20:19:07.501 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.606 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:19:07.606 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:19:07.606 -08 000000034 INF: ===================Camera #0 Frame #56===================
17-02-28 20:19:07.628 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.633 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:19:07.633 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:19:07.633 -08 000000085 INF: ===================Camera #2 Frame #57===================
17-02-28 20:19:07.761 -08 000000050 INF: Y Motor: Unshifted Position: 4872043
17-02-28 20:19:07.777 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:19:07.777 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:19:07.777 -08 000000034 INF: ===================Camera #0 Frame #62===================
17-02-28 20:19:07.811 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.815 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:19:07.815 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:19:07.815 -08 000000085 INF: ===================Camera #2 Frame #63===================
17-02-28 20:19:07.938 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.952 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:19:07.952 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:19:07.952 -08 000000034 INF: ===================Camera #0 Frame #68===================
17-02-28 20:19:07.993 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:19:07.993 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:19:07.993 -08 000000085 INF: ===================Camera #2 Frame #70===================
17-02-28 20:19:08.074 -08 000000050 INF: Y Motor: Unshifted Position: 4668591
17-02-28 20:19:08.121 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:19:08.121 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:19:08.121 -08 000000034 INF: ===================Camera #0 Frame #75===================
17-02-28 20:19:08.124 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:08.176 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:19:08.176 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:19:08.176 -08 000000085 INF: ===================Camera #2 Frame #77===================
17-02-28 20:19:08.248 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:08.293 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:19:08.293 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:19:08.293 -08 000000034 INF: ===================Camera #0 Frame #81===================
17-02-28 20:19:08.348 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:19:08.348 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:19:08.348 -08 000000085 INF: ===================Camera #2 Frame #83===================
17-02-28 20:19:08.385 -08 000000050 INF: Y Motor: Unshifted Position: 4466212
17-02-28 20:19:08.435 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:08.461 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:19:08.461 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:19:08.461 -08 000000034 INF: ===================Camera #0 Frame #87===================
17-02-28 20:19:08.517 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:19:08.517 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:19:08.517 -08 000000085 INF: ===================Camera #2 Frame #89===================
17-02-28 20:19:08.563 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:08.629 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:19:08.629 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:19:08.629 -08 000000034 INF: ===================Camera #0 Frame #93===================
17-02-28 20:19:08.686 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:19:08.686 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:19:08.686 -08 000000085 INF: ===================Camera #2 Frame #95===================
17-02-28 20:19:08.698 -08 000000050 INF: Y Motor: Unshifted Position: 4261462
17-02-28 20:19:08.748 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:08.797 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:19:08.797 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:19:08.797 -08 000000034 INF: ===================Camera #0 Frame #99===================
17-02-28 20:19:08.855 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:19:08.855 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:19:08.855 -08 000000085 INF: ===================Camera #2 Frame #102===================
17-02-28 20:19:08.872 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:08.965 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:19:08.965 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:19:08.965 -08 000000034 INF: ===================Camera #0 Frame #106===================
17-02-28 20:19:09.011 -08 000000050 INF: Y Motor: Unshifted Position: 4057790
17-02-28 20:19:09.027 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:19:09.027 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:19:09.027 -08 000000085 INF: ===================Camera #2 Frame #108===================
17-02-28 20:19:09.061 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:09.137 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:19:09.137 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:19:09.137 -08 000000034 INF: ===================Camera #0 Frame #112===================
17-02-28 20:19:09.186 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:09.197 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:19:09.197 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:19:09.197 -08 000000085 INF: ===================Camera #2 Frame #114===================
17-02-28 20:19:09.306 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:19:09.306 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:19:09.306 -08 000000034 INF: ===================Camera #0 Frame #118===================
17-02-28 20:19:09.321 -08 000000050 INF: Y Motor: Unshifted Position: 3857589
17-02-28 20:19:09.366 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:19:09.366 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:19:09.366 -08 000000085 INF: ===================Camera #2 Frame #120===================
17-02-28 20:19:09.371 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:09.474 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:19:09.474 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:19:09.474 -08 000000034 INF: ===================Camera #0 Frame #124===================
17-02-28 20:19:09.498 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:09.535 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:19:09.535 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:19:09.535 -08 000000085 INF: ===================Camera #2 Frame #127===================
17-02-28 20:19:09.634 -08 000000050 INF: Y Motor: Unshifted Position: 3653274
17-02-28 20:19:09.642 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:19:09.642 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:19:09.642 -08 000000034 INF: ===================Camera #0 Frame #131===================
17-02-28 20:19:09.684 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:09.707 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:19:09.707 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:19:09.707 -08 000000085 INF: ===================Camera #2 Frame #133===================
17-02-28 20:19:09.808 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:09.813 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:19:09.813 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:19:09.813 -08 000000034 INF: ===================Camera #0 Frame #137===================
17-02-28 20:19:09.876 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:19:09.876 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:19:09.876 -08 000000085 INF: ===================Camera #2 Frame #139===================
17-02-28 20:19:09.947 -08 000000050 INF: Y Motor: Unshifted Position: 3450251
17-02-28 20:19:09.981 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:19:09.981 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:19:09.981 -08 000000034 INF: ===================Camera #0 Frame #143===================
17-02-28 20:19:09.997 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.045 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:19:10.045 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:19:10.045 -08 000000085 INF: ===================Camera #2 Frame #145===================
17-02-28 20:19:10.121 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.149 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:19:10.149 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:19:10.149 -08 000000034 INF: ===================Camera #0 Frame #149===================
17-02-28 20:19:10.214 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:19:10.214 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:19:10.214 -08 000000085 INF: ===================Camera #2 Frame #152===================
17-02-28 20:19:10.257 -08 000000050 INF: Y Motor: Unshifted Position: 3248758
17-02-28 20:19:10.307 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.317 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:19:10.317 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:19:10.317 -08 000000034 INF: ===================Camera #0 Frame #155===================
17-02-28 20:19:10.386 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:19:10.386 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:19:10.386 -08 000000085 INF: ===================Camera #2 Frame #158===================
17-02-28 20:19:10.432 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.485 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:19:10.485 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:19:10.485 -08 000000034 INF: ===================Camera #0 Frame #162===================
17-02-28 20:19:10.555 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:19:10.555 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:19:10.555 -08 000000085 INF: ===================Camera #2 Frame #164===================
17-02-28 20:19:10.571 -08 000000050 INF: Y Motor: Unshifted Position: 3044664
17-02-28 20:19:10.621 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.656 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:19:10.656 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:19:10.656 -08 000000034 INF: ===================Camera #0 Frame #168===================
17-02-28 20:19:10.724 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:19:10.724 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:19:10.724 -08 000000085 INF: ===================Camera #2 Frame #170===================
17-02-28 20:19:10.745 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.824 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:19:10.824 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:19:10.824 -08 000000034 INF: ===================Camera #0 Frame #174===================
17-02-28 20:19:10.881 -08 000000050 INF: Y Motor: Unshifted Position: 2842950
17-02-28 20:19:10.893 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:19:10.893 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:19:10.893 -08 000000085 INF: ===================Camera #2 Frame #177===================
17-02-28 20:19:10.931 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.992 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:19:10.992 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:19:10.992 -08 000000034 INF: ===================Camera #0 Frame #180===================
17-02-28 20:19:11.058 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:11.065 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:19:11.065 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:19:11.065 -08 000000085 INF: ===================Camera #2 Frame #183===================
17-02-28 20:19:11.160 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:19:11.160 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:19:11.160 -08 000000034 INF: ===================Camera #0 Frame #186===================
17-02-28 20:19:11.194 -08 000000050 INF: Y Motor: Unshifted Position: 2639281
17-02-28 20:19:11.234 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:19:11.234 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:19:11.234 -08 000000085 INF: ===================Camera #2 Frame #189===================
17-02-28 20:19:11.244 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:11.328 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:19:11.328 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:19:11.328 -08 000000034 INF: ===================Camera #0 Frame #193===================
17-02-28 20:19:11.368 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:11.403 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:19:11.403 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:19:11.403 -08 000000085 INF: ===================Camera #2 Frame #195===================
17-02-28 20:19:11.499 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:19:11.499 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:19:11.499 -08 000000034 INF: ===================Camera #0 Frame #199===================
17-02-28 20:19:11.507 -08 000000050 INF: Y Motor: Unshifted Position: 2435843
17-02-28 20:19:11.557 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:11.572 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:19:11.572 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:19:11.572 -08 000000085 INF: ===================Camera #2 Frame #202===================
17-02-28 20:19:11.667 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:19:11.667 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:19:11.667 -08 000000034 INF: ===================Camera #0 Frame #205===================
17-02-28 20:19:11.681 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:11.744 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:19:11.744 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:19:11.744 -08 000000085 INF: ===================Camera #2 Frame #208===================
17-02-28 20:19:11.817 -08 000000050 INF: Y Motor: Unshifted Position: 2234120
17-02-28 20:19:11.835 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:19:11.835 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:19:11.835 -08 000000034 INF: ===================Camera #0 Frame #211===================
17-02-28 20:19:11.867 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:11.913 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:19:11.913 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:19:11.913 -08 000000085 INF: ===================Camera #2 Frame #214===================
17-02-28 20:19:11.994 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.003 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:19:12.003 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:19:12.003 -08 000000034 INF: ===================Camera #0 Frame #217===================
17-02-28 20:19:12.082 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:19:12.082 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:19:12.082 -08 000000085 INF: ===================Camera #2 Frame #220===================
17-02-28 20:19:12.130 -08 000000050 INF: Y Motor: Unshifted Position: 2030667
17-02-28 20:19:12.173 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:19:12.173 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:19:12.173 -08 000000034 INF: ===================Camera #0 Frame #224===================
17-02-28 20:19:12.180 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.251 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:19:12.251 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:19:12.251 -08 000000085 INF: ===================Camera #2 Frame #227===================
17-02-28 20:19:12.304 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.346 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:19:12.346 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:19:12.346 -08 000000034 INF: ===================Camera #0 Frame #230===================
17-02-28 20:19:12.423 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:19:12.423 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:19:12.423 -08 000000085 INF: ===================Camera #2 Frame #233===================
17-02-28 20:19:12.441 -08 000000050 INF: Y Motor: Unshifted Position: 1828302
17-02-28 20:19:12.491 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.516 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:19:12.516 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:19:12.516 -08 000000034 INF: ===================Camera #0 Frame #236===================
17-02-28 20:19:12.592 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:19:12.592 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:19:12.592 -08 000000085 INF: ===================Camera #2 Frame #239===================
17-02-28 20:19:12.620 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.686 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:19:12.686 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:19:12.686 -08 000000034 INF: ===================Camera #0 Frame #243===================
17-02-28 20:19:12.754 -08 000000050 INF: Y Motor: Unshifted Position: 1624851
17-02-28 20:19:12.761 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:19:12.761 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:19:12.761 -08 000000085 INF: ===================Camera #2 Frame #245===================
17-02-28 20:19:12.804 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.860 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:19:12.860 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:19:12.860 -08 000000034 INF: ===================Camera #0 Frame #249===================
17-02-28 20:19:12.929 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.930 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:19:12.930 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:19:12.930 -08 000000085 INF: ===================Camera #2 Frame #252===================
17-02-28 20:19:13.030 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:19:13.030 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:19:13.030 -08 000000034 INF: ===================Camera #0 Frame #255===================
17-02-28 20:19:13.067 -08 000000050 INF: Y Motor: Unshifted Position: 1423131
17-02-28 20:19:13.102 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:19:13.102 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:19:13.102 -08 000000085 INF: ===================Camera #2 Frame #258===================
17-02-28 20:19:13.117 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:13.200 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:19:13.200 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:19:13.200 -08 000000034 INF: ===================Camera #0 Frame #262===================
17-02-28 20:19:13.241 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:13.273 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:19:13.273 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:19:13.273 -08 000000085 INF: ===================Camera #2 Frame #264===================
17-02-28 20:19:13.374 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:19:13.374 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:19:13.374 -08 000000034 INF: ===================Camera #0 Frame #268===================
17-02-28 20:19:13.379 -08 000000050 INF: Y Motor: Unshifted Position: 1220328
17-02-28 20:19:13.429 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:13.444 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:19:13.444 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:19:13.444 -08 000000085 INF: ===================Camera #2 Frame #270===================
17-02-28 20:19:13.501 -08 000000058 INF: FPGA: Recv TDIYWAIT
17-02-28 20:19:13.501 -08 000000033 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:13.503 -08 000000033 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:19:13.504 -08 000000060 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:19:13.504 -08 000000072 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:19:13.504 -08 000000060 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:19:13.504 -08 000000060 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:19:13.504 -08 000000060 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:19:13.504 -08 000000072 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:19:13.504 -08 000000060 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:19:13.504 -08 000000072 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:19:13.504 -08 000000072 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:19:13.505 -08 000000072 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:19:13.543 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:13.543 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:13.543 -08 000000034 INF: ===================Camera #0 Frame #272===================
17-02-28 20:19:13.553 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:13.556 -08 000000034 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:13.557 -08 000000034 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:13.689 -08 000000050 INF: Y Motor: Unshifted Position: 1016658
17-02-28 20:19:13.690 -08 000000034 INF: Camera #0 ReleaseBuffer
17-02-28 20:19:13.690 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:13.690 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:13.690 -08 000000085 INF: ===================Camera #2 Frame #272===================
17-02-28 20:19:13.690 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:19:13.696 -08 000000085 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:13.697 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:13.720 -08 000000034 INF: ======================================
17-02-28 20:19:13.739 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:13.864 -08 000000085 INF: Camera #2 ReleaseBuffer
17-02-28 20:19:13.864 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:19:13.876 -08 000000058 INF: FPGA: Recv EX1MV
17-02-28 20:19:13.876 -08 000000058 INF: FPGA: Recv EX2MV
17-02-28 20:19:13.876 -08 000000072 INF: Excitation Filter 2: Moved 107 steps in 372.0812 ms
17-02-28 20:19:13.876 -08 000000072 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.2138 ms
17-02-28 20:19:13.876 -08 000000072 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.2853 ms
17-02-28 20:19:13.876 -08 000000060 INF: Excitation Filter 1: Moved 107 steps in 372.283 ms
17-02-28 20:19:13.876 -08 000000060 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.4856 ms
17-02-28 20:19:13.876 -08 000000060 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.5955 ms
17-02-28 20:19:13.876 -08 000000072 INF: ======================================
17-02-28 20:19:13.877 -08 000000060 INF: ======================================
17-02-28 20:19:13.878 -08 000000050 INF: Y Motor: Unshifted Position: 983487
17-02-28 20:19:13.878 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:13.878 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:13.878 -08 000000033 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:13.879 -08 000000033 INF: ======================================
17-02-28 20:19:13.899 -08 000000085 INF: ======================================
17-02-28 20:19:13.900 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:19:13.901 -08 000000075 INF: ======================================
17-02-28 20:19:13.941 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:19:13.941 -08 000000050 INF: Y Motor: Moved to 14.8349 after 7862 ms
17-02-28 20:19:13.941 -08 000000050 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:14.002 -08 000000050 INF: Y Motor: Recv v 4097\r
17-02-28 20:19:14.002 -08 000000050 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:14.002 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:14.066 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:19:14.066 -08 000000050 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:14.066 -08 000000050 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:14.126 -08 000000050 INF: Y Motor: Recv v 134217728\r
17-02-28 20:19:14.126 -08 000000050 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:19:14.126 -08 000000050 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:14.126 -08 000000050 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:14.189 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:19:14.189 -08 000000050 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:14.189 -08 000000050 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:14.189 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:14.250 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:19:14.250 -08 000000050 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:14.250 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:14.315 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:19:14.315 -08 000000050 INF: ======================================
17-02-28 20:19:14.316 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:14.317 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:14.318 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.318 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:19:14.373 -08 000000072 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:19:14.373 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:14.438 -08 000000081 INF: FPGA: Recv TDIYERD 1483489
17-02-28 20:19:14.438 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:19:14.500 -08 000000035 INF: FPGA: Recv ZADCR 17386
17-02-28 20:19:14.500 -08 000000018 INF: At scan end Y pos = 14.835 and Z pos = -0.067. Y moved -48.539 mm
17-02-28 20:19:14.500 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:19:14.562 -08 000000025 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:19:14.562 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:19:14.562 -08 000000018 INF: TDIScan finished after 12873.8027 ms
17-02-28 20:19:14.562 -08 000000018 INF: Image[0]: Y should trigger at 63.374 mm, 2nd row was at 64.283 mm (error = 0.909 mm)
17-02-28 20:19:14.562 -08 000000018 INF: Image[2]: Y should trigger at 63.374 mm, 2nd row was at 64.283 mm (error = 0.909 mm)
17-02-28 20:19:14.564 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.599 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.852 um
17-02-28 20:19:14.599 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.600 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:19:14.624 -08 000000072 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:19:14.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.625 -08 000000090 INF: ===================Dither Clean Up Command===================
17-02-28 20:19:14.625 -08 000000052 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:19:14.625 -08 000000108 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:19:14.625 -08 000000050 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:19:14.625 -08 000000108 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:14.625 -08 000000108 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:14.625 -08 000000050 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:19:14.625 -08 000000050 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:19:14.626 -08 000000052 INF: ======================================
17-02-28 20:19:14.626 -08 000000030 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:14.626 -08 000000047 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:14.627 -08 000000047 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:19:14.629 -08 000000030 INF: ===================LFT:Extracting coords===================
17-02-28 20:19:14.654 -08 000000030 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:14.655 -08 000000030 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:19:14.656 -08 000000036 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.656 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.656 -08 000000025 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.656 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.656 -08 000000036 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:14.656 -08 000000025 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:14.657 -08 000000057 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:14.657 -08 000000038 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:14.686 -08 000000081 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:14.686 -08 000000081 INF: FPGA: Recv ZSEL 
17-02-28 20:19:14.686 -08 000000047 INF: FPGA: Xmit ZDACW 18205\n
17-02-28 20:19:14.686 -08 000000050 INF: ======================================
17-02-28 20:19:14.689 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:19:14.689 -08 000000108 INF: ======================================
17-02-28 20:19:14.730 -08 000000036 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:14.731 -08 000000025 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:14.731 -08 000000057 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:14.731 -08 000000038 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:14.748 -08 000000058 INF: FPGA: Recv ZDACW 
17-02-28 20:19:14.749 -08 000000047 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:19:14.749 -08 000000047 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:19:14.810 -08 000000010 INF: FPGA: Recv TDIBB
17-02-28 20:19:14.810 -08 000000047 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:14.811 -08 000000047 INF: ======================================
17-02-28 20:19:14.882 -08 000000025 INF: LFT found best fwhm score 2.000293 in 151 ms
17-02-28 20:19:14.882 -08 000000025 INF: LFT found good score at index 433 with fwhm value 2.000293. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:4,B
17-02-28 20:19:14.882 -08 000000036 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:19:14.882 -08 000000036 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.049088946378686 in the next cycle, cycle 4 FC:A, C:3,L:4,B
17-02-28 20:19:14.882 -08 000000025 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.882 -08 000000036 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.882 -08 000000057 INF: LFT found best fwhm score 2.000069 in 151 ms
17-02-28 20:19:14.882 -08 000000057 INF: LFT found good score at index 7373 with fwhm value 2.000069. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:4,B
17-02-28 20:19:14.882 -08 000000025 INF: ======================================
17-02-28 20:19:14.882 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.883 -08 000000036 INF: ======================================
17-02-28 20:19:14.883 -08 000000038 INF: LFT found best fwhm score 2.000072 in 152 ms
17-02-28 20:19:14.883 -08 000000057 INF: ======================================
17-02-28 20:19:14.883 -08 000000038 INF: LFT found good score at index 3657 with fwhm value 2.000072. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:4,B
17-02-28 20:19:14.883 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.883 -08 000000038 INF: ======================================
17-02-28 20:19:14.884 -08 000000030 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:14.885 -08 000000030 INF: LFT weighted average best Z for bottom surface is at -0.049mm FC:A, C:3,L:4,B
17-02-28 20:19:14.885 -08 000000030 INF: ======================================
17-02-28 20:19:14.886 -08 000000090 INF: ======================================
17-02-28 20:19:14.887 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:19:14.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:19:14.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:19:14.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:19:14.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494===================
17-02-28 20:19:14.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494===================
17-02-28 20:19:14.890 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:19:14.890 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494===================
17-02-28 20:19:14.890 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:19:14.891 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:19:14.913 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:19:14.914 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:19:14.914 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:14.914 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:19:14.914 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:19:14.915 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:19:14.915 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:19:14.935 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:14.937 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:14.937 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:14.937 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:14.968 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":4,"Tile":2204,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF221","HCSMMF277","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.004 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:15.005 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:15.005 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:19:15.005 -08 000000018 INF: Lane 5, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:19:15.006 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:15.006 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:15.009 -08 000000045 INF: ===================Move Tilt Motor 1===================
17-02-28 20:19:15.010 -08 000000045 INF: ======================================
17-02-28 20:19:15.011 -08 000000058 INF: ===================Move Tilt Motor 2===================
17-02-28 20:19:15.011 -08 000000087 INF: ===================Move Tilt Motor 3===================
17-02-28 20:19:15.012 -08 000000058 INF: ======================================
17-02-28 20:19:15.012 -08 000000087 INF: ======================================
17-02-28 20:19:15.013 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:15.014 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:15.024 -08 000000018 INF: Transformed XStagePosition from 17.19893 mm to 17.1989307403564 mm.
17-02-28 20:19:15.125 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:19:15.126 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:19:15.126 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:19:15.127 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:15.128 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:15.132 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":4,"Tile":2209,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF184","HCSMMF189","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.134 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:19:15.134 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":4,"Tile":2201,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF187","HCSMMF229","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.135 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:19:15.135 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:19:15.137 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":4,"Tile":2202,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF203","HCSMMF236","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.140 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":4,"Tile":2208,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF239","HCSMMF282","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.142 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":4,"Tile":2206,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF263","HCSMMF207","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.144 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":4,"Tile":2217,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF235","HCSMMF230","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.146 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":4,"Tile":2207,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF285","HCSMMF281","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.149 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":4,"Tile":2215,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF255","HCSMMF208","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.151 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":4,"Tile":2211,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF220","HCSMMF260","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.152 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":4,"Tile":2214,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF176","HCSMMF251","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.153 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":4,"Tile":2212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF223","HCSMMF197","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.154 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":4,"Tile":2213,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF262","HCSMMF272","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.156 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":4,"Tile":2219,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF199","HCSMMF271","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.186 -08 000000089 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:15.187 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:15.187 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:19:15.187 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0694 mm
17-02-28 20:19:15.187 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:19:15.200 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":4,"Tile":2205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF185","HCSMMF266","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.202 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":4,"Tile":2210,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF248","HCSMMF242","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.202 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":4,"Tile":2216,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF186","HCSMMF233","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.203 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":4,"Tile":2203,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF238","HCSMMF244","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.204 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":4,"Tile":2218,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF215","HCSMMF210","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.205 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":4,"Tile":2227,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF178","HCSMMF200","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.206 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":4,"Tile":2220,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF243","HCSMMF275","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.206 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":4,"Tile":2221,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF227","HCSMMF261","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.207 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":4,"Tile":2225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF246","HCSMMF257","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.208 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":4,"Tile":2226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF182","HCSMMF234","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.209 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":4,"Tile":2224,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF267","HCSMMF180","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.210 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":4,"Tile":2222,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF250","HCSMMF252","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.212 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":4,"Tile":2223,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF265","HCSMMF228","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.215 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":4,"Tile":2228,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF237","HCSMMF194","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.231 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:15.237 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:19:15.248 -08 000000105 INF: FPGA: Recv ZTRG 
17-02-28 20:19:15.248 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:19:15.311 -08 000000066 INF: FPGA: Recv ZYT 
17-02-28 20:19:15.311 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:19:15.311 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:19:15.332 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:15.332 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:19:15.369 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:15.374 -08 000000034 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:19:15.374 -08 000000034 INF: FPGA: Recv ZMV 
17-02-28 20:19:15.374 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:19:15.374 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 63.0871 ms
17-02-28 20:19:15.374 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:19:15.375 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:19:15.436 -08 000000035 INF: FPGA: Recv ZDACR 60292
17-02-28 20:19:15.436 -08 000000018 INF: Z Motor: MoveAndTrigger took 249.0701 ms w/comms
17-02-28 20:19:15.436 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:19:15.436 -08 000000018 INF: Z Motor: MoveAbsStepped took 249.2396 ms
17-02-28 20:19:15.437 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:15.437 -08 000000018 INF: Transformed XStagePosition from 17.19893 mm to 17.1989307403564 mm.
17-02-28 20:19:15.446 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:19:15.446 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:15.446 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:15.446 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:19:15.446 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:19:15.467 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:15.472 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:19:15.498 -08 000000105 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:15.518 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:15.518 -08 000000018 INF: Transformed XStagePosition from 17.19893 mm to 17.1989307403564 mm.
17-02-28 20:19:15.526 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:19:15.526 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:15.526 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:15.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:15.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:19:15.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:15.529 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = E_1
17-02-28 20:19:15.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:15.530 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:15.531 -08 000000010 INF: ===================MoveEmissionFilters===================
17-02-28 20:19:15.531 -08 000000085 INF: ===================Move X,Y===================
17-02-28 20:19:15.532 -08 000000085 INF: ===================Move X,Y, Parallel===================
17-02-28 20:19:15.532 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:15.532 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:15.532 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:15.532 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:15.532 -08 000000035 INF: ===================Move X Motor without settling===================
17-02-28 20:19:15.533 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:15.533 -08 000000035 INF: X Motor: Xmit PR VM\n
17-02-28 20:19:15.533 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:15.533 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:15.533 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:15.533 -08 000000086 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:15.533 -08 000000086 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8349 mm
17-02-28 20:19:15.534 -08 000000086 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:15.534 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:15.534 -08 000000053 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:19:15.534 -08 000000050 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:19:15.534 -08 000000109 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:19:15.534 -08 000000077 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:19:15.534 -08 000000064 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:19:15.534 -08 000000072 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:19:15.534 -08 000000025 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:19:15.534 -08 000000081 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:19:15.534 -08 000000053 INF: ======================================
17-02-28 20:19:15.534 -08 000000064 INF: ======================================
17-02-28 20:19:15.535 -08 000000081 INF: ======================================
17-02-28 20:19:15.535 -08 000000050 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:19:15.535 -08 000000109 INF: ======================================
17-02-28 20:19:15.535 -08 000000050 INF: ======================================
17-02-28 20:19:15.535 -08 000000025 INF: ======================================
17-02-28 20:19:15.536 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:15.537 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:15.537 -08 000000077 INF: ======================================
17-02-28 20:19:15.537 -08 000000072 INF: ======================================
17-02-28 20:19:15.538 -08 000000045 INF: ======================================
17-02-28 20:19:15.538 -08 000000066 INF: ======================================
17-02-28 20:19:15.539 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:15.539 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:15.540 -08 000000036 INF: ======================================
17-02-28 20:19:15.540 -08 000000052 INF: ======================================
17-02-28 20:19:15.541 -08 000000010 INF: ======================================
17-02-28 20:19:15.563 -08 000000035 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:19:15.563 -08 000000035 INF: X Motor: Xmit PR VI\n
17-02-28 20:19:15.580 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:15.586 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:19:15.624 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:15.624 -08 000000086 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:15.624 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:15.624 -08 000000035 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:19:15.624 -08 000000035 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:19:15.624 -08 000000035 INF: X Motor: Moving to 17.1989 mm @15.000 mm/sec, started at 14.9961 mm
17-02-28 20:19:15.624 -08 000000035 INF: X Motor: Xmit MA -17122\n
17-02-28 20:19:15.686 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:15.686 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:15.687 -08 000000035 INF: X Motor: Recv MA -17122\r\n>
17-02-28 20:19:15.687 -08 000000035 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:19:15.694 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:15.748 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:15.748 -08 000000086 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:15.748 -08 000000086 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:19:15.748 -08 000000086 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:19:15.810 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:15.810 -08 000000086 INF: Y Motor: Start the move command
17-02-28 20:19:15.810 -08 000000086 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:15.876 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:15.876 -08 000000086 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:19:15.876 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.000 -08 000000086 INF: Y Motor: Unshifted Position: 1069760
17-02-28 20:19:16.013 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:19:16.050 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.174 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.313 -08 000000035 INF: X Motor: Xmit PR ER\n
17-02-28 20:19:16.313 -08 000000086 INF: Y Motor: Unshifted Position: 1772657
17-02-28 20:19:16.363 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.375 -08 000000035 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:19:16.375 -08 000000035 INF: X Motor: Moved to 17.1982 after 687 ms
17-02-28 20:19:16.375 -08 000000035 INF: ======================================
17-02-28 20:19:16.487 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.623 -08 000000086 INF: Y Motor: Unshifted Position: 2555170
17-02-28 20:19:16.673 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.798 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.934 -08 000000086 INF: Y Motor: Unshifted Position: 3333455
17-02-28 20:19:16.984 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:17.111 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:17.247 -08 000000086 INF: Y Motor: Unshifted Position: 4119354
17-02-28 20:19:17.297 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:17.422 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:17.558 -08 000000086 INF: Y Motor: Unshifted Position: 4894291
17-02-28 20:19:17.608 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:17.735 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:17.871 -08 000000086 INF: Y Motor: Unshifted Position: 5675948
17-02-28 20:19:17.921 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:18.045 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:18.182 -08 000000086 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:19:18.182 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:18.182 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:18.247 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:18.247 -08 000000086 INF: Y Motor: Moved to 64.4706 after 2370 ms
17-02-28 20:19:18.247 -08 000000086 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:18.307 -08 000000086 INF: Y Motor: Recv v 4096\r
17-02-28 20:19:18.307 -08 000000086 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:18.307 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:18.375 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:18.375 -08 000000086 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:18.375 -08 000000086 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:18.434 -08 000000086 INF: Y Motor: Recv v 402653184\r
17-02-28 20:19:18.434 -08 000000086 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:19:18.434 -08 000000086 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:18.434 -08 000000086 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:18.496 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:18.496 -08 000000086 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:18.496 -08 000000086 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:18.496 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:18.558 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:18.558 -08 000000086 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:18.558 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:18.623 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:18.623 -08 000000086 INF: ======================================
17-02-28 20:19:18.625 -08 000000085 INF: ===================Move X,Y===================
17-02-28 20:19:18.626 -08 000000085 INF: ======================================
17-02-28 20:19:18.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:18.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:18.628 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:19:18.628 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:19:18.682 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:18.682 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:19:18.744 -08 000000045 INF: FPGA: Recv ZFREQCL
17-02-28 20:19:18.745 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:19:18.745 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:18.745 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:18.804 -08 000000082 INF: FPGA: Recv TDIYERD 6447056
17-02-28 20:19:18.804 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447056 counts (64.471 mm)
17-02-28 20:19:18.805 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:18.805 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:18.806 -08 000000057 INF: ===================TDI Scan Setup===================
17-02-28 20:19:18.806 -08 000000072 INF: ===================Set YMotor gains for scans===================
17-02-28 20:19:18.807 -08 000000057 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:19:18.807 -08 000000072 INF: ======================================
17-02-28 20:19:18.807 -08 000000057 INF: ===================TDI Scan Setup===================
17-02-28 20:19:18.808 -08 000000057 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:19:18.809 -08 000000057 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:19:18.809 -08 000000057 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:19:18.869 -08 000000051 INF: FPGA: Recv TDIYPOS
17-02-28 20:19:18.869 -08 000000057 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:19:18.871 -08 000000057 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:19:18.871 -08 000000057 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:19:18.936 -08 000000053 INF: FPGA: Recv TDIYARM2
17-02-28 20:19:18.936 -08 000000057 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:19:18.937 -08 000000057 INF: ===================TDI Scan Setup===================
17-02-28 20:19:18.939 -08 000000057 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:19:18.939 -08 000000057 INF: ===================TDI Scan Setup===================
17-02-28 20:19:18.941 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:19:18.941 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:19:18.942 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:19.311 -08 000000057 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:19:19.311 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:19:19.311 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:19.326 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:19:19.328 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:19.708 -08 000000057 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53955465288 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:19:19.708 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:19:19.708 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:19.723 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:19:19.725 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:19:19.726 -08 000000057 INF: ===================TDI Scan Setup===================
17-02-28 20:19:19.727 -08 000000057 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:19.728 -08 000000057 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:19:19.728 -08 000000057 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:19.730 -08 000000057 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:19:19.730 -08 000000057 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:19:19.730 -08 000000057 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:19:19.730 -08 000000057 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:19:19.805 -08 000000025 INF: FPGA: Recv ZYT 
17-02-28 20:19:19.805 -08 000000057 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:19:19.805 -08 000000057 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:19:19.867 -08 000000108 INF: FPGA: Recv ZARM
17-02-28 20:19:19.867 -08 000000057 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9884 ms
17-02-28 20:19:19.867 -08 000000057 INF: Z Motor: ArmAbsStepped took 136.9111 ms
17-02-28 20:19:19.868 -08 000000057 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:19.869 -08 000000057 INF: ===================TDI Scan Setup===================
17-02-28 20:19:19.870 -08 000000057 INF: ======================================
17-02-28 20:19:19.871 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:19.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:19.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:19.873 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:19.873 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:19.874 -08 000000010 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:19:19.874 -08 000000087 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:19:19.874 -08 000000010 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:19:19.874 -08 000000010 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:19:19.874 -08 000000010 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:19:19.874 -08 000000087 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:19:19.874 -08 000000010 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:19:19.874 -08 000000087 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:19:19.874 -08 000000087 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:19:19.875 -08 000000087 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:19:20.244 -08 000000045 INF: FPGA: Recv EX2MV
17-02-28 20:19:20.244 -08 000000045 INF: FPGA: Recv EX1MV
17-02-28 20:19:20.244 -08 000000087 INF: Excitation Filter 1: Moved -107 steps in 369.569 ms
17-02-28 20:19:20.244 -08 000000010 INF: Excitation Filter 2: Moved -107 steps in 369.7096 ms
17-02-28 20:19:20.244 -08 000000087 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.7397 ms
17-02-28 20:19:20.244 -08 000000087 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.9822 ms
17-02-28 20:19:20.244 -08 000000010 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.9955 ms
17-02-28 20:19:20.244 -08 000000010 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 370.2274 ms
17-02-28 20:19:20.245 -08 000000087 INF: ======================================
17-02-28 20:19:20.245 -08 000000010 INF: ======================================
17-02-28 20:19:20.247 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:20.248 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:20.249 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:19:20.249 -08 000000038 INF: ===================Serial===================
17-02-28 20:19:20.249 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:20.249 -08 000000078 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:20.250 -08 000000085 INF: ===================Camera TDI, Parallel===================
17-02-28 20:19:20.250 -08 000000078 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:19:20.250 -08 000000078 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:20.250 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:20.250 -08 000000038 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:19:20.251 -08 000000038 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:19:20.251 -08 000000039 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:19:20.251 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:19:20.251 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:19:20.252 -08 000000039 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:19:20.252 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.252 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.254 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.254 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.304 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:19:20.304 -08 000000078 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:20.304 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:20.366 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:19:20.366 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:20.403 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.403 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.404 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.404 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.433 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:19:20.433 -08 000000078 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:20.433 -08 000000078 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:19:20.433 -08 000000078 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:19:20.493 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:19:20.493 -08 000000078 INF: Y Motor: Start the move command
17-02-28 20:19:20.493 -08 000000078 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:20.553 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.553 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.554 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.554 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.555 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:19:20.555 -08 000000078 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:19:20.555 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:20.679 -08 000000078 INF: Y Motor: Unshifted Position: 5929081
17-02-28 20:19:20.703 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.703 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.704 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.704 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.729 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:20.853 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:20.853 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:19:20.853 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:19:20.853 -08 000000086 INF: ===================Camera #2 Frame #1===================
17-02-28 20:19:20.854 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:19:20.854 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:19:20.854 -08 000000047 INF: ===================Camera #0 Frame #1===================
17-02-28 20:19:20.992 -08 000000078 INF: Y Motor: Unshifted Position: 5882079
17-02-28 20:19:21.009 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:19:21.009 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:19:21.009 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:19:21.009 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:19:21.009 -08 000000086 INF: ===================Camera #2 Frame #3===================
17-02-28 20:19:21.009 -08 000000047 INF: ===================Camera #0 Frame #3===================
17-02-28 20:19:21.042 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:21.166 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:21.168 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:21.168 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:21.168 -08 000000047 INF: ===================Camera #0 Frame #4===================
17-02-28 20:19:21.169 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:21.169 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:21.169 -08 000000086 INF: ===================Camera #2 Frame #4===================
17-02-28 20:19:21.302 -08 000000078 INF: Y Motor: Unshifted Position: 5835575
17-02-28 20:19:21.322 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:19:21.322 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:21.322 -08 000000047 INF: ===================Camera #0 Frame #5===================
17-02-28 20:19:21.322 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:19:21.322 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:21.323 -08 000000086 INF: ===================Camera #2 Frame #5===================
17-02-28 20:19:21.352 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:21.365 -08 000000051 INF: FPGA: Recv ZWAIT 
17-02-28 20:19:21.365 -08 000000038 INF: ===================Serial===================
17-02-28 20:19:21.367 -08 000000038 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:19:21.368 -08 000000038 INF: ===================Serial===================
17-02-28 20:19:21.369 -08 000000038 INF: ======================================
17-02-28 20:19:21.426 -08 000000075 INF: FPGA: Recv TDIYWAIT
17-02-28 20:19:21.427 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:21.428 -08 000000039 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:19:21.429 -08 000000051 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:19:21.429 -08 000000109 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:19:21.429 -08 000000051 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:19:21.429 -08 000000051 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:19:21.429 -08 000000109 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:19:21.429 -08 000000051 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:19:21.430 -08 000000109 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:19:21.430 -08 000000109 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:19:21.430 -08 000000051 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:19:21.431 -08 000000109 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:19:21.475 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:19:21.475 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:19:21.475 -08 000000047 INF: ===================Camera #0 Frame #6===================
17-02-28 20:19:21.476 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:19:21.476 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:19:21.476 -08 000000086 INF: ===================Camera #2 Frame #6===================
17-02-28 20:19:21.478 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:21.478 -08 000000047 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:19:21.479 -08 000000047 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:21.481 -08 000000086 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:19:21.482 -08 000000086 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:21.506 -08 000000047 INF: Camera #0 ReleaseBuffer
17-02-28 20:19:21.506 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:19:21.507 -08 000000047 INF: ======================================
17-02-28 20:19:21.532 -08 000000086 INF: Camera #2 ReleaseBuffer
17-02-28 20:19:21.532 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:19:21.533 -08 000000086 INF: ======================================
17-02-28 20:19:21.535 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:19:21.536 -08 000000085 INF: ======================================
17-02-28 20:19:21.614 -08 000000078 INF: Y Motor: Unshifted Position: 5790762
17-02-28 20:19:21.664 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:21.801 -08 000000075 INF: FPGA: Recv EX1MV
17-02-28 20:19:21.801 -08 000000075 INF: FPGA: Recv EX2MV
17-02-28 20:19:21.801 -08 000000109 INF: Excitation Filter 2: Moved 107 steps in 371.3767 ms
17-02-28 20:19:21.801 -08 000000109 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.596 ms
17-02-28 20:19:21.801 -08 000000109 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.6725 ms
17-02-28 20:19:21.801 -08 000000051 INF: Excitation Filter 1: Moved 107 steps in 371.5177 ms
17-02-28 20:19:21.801 -08 000000051 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.9341 ms
17-02-28 20:19:21.801 -08 000000051 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.1176 ms
17-02-28 20:19:21.802 -08 000000109 INF: ======================================
17-02-28 20:19:21.802 -08 000000051 INF: ======================================
17-02-28 20:19:21.803 -08 000000078 INF: Y Motor: Unshifted Position: 5790743
17-02-28 20:19:21.803 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:21.803 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:21.803 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:21.804 -08 000000039 INF: ======================================
17-02-28 20:19:21.865 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:19:21.865 -08 000000078 INF: Y Motor: Moved to 62.9074 after 1310 ms
17-02-28 20:19:21.865 -08 000000078 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:21.927 -08 000000078 INF: Y Motor: Recv v 4097\r
17-02-28 20:19:21.927 -08 000000078 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:21.927 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:21.989 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:19:21.989 -08 000000078 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:21.989 -08 000000078 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:22.051 -08 000000078 INF: Y Motor: Recv v 134217728\r
17-02-28 20:19:22.051 -08 000000078 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:19:22.051 -08 000000078 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:22.051 -08 000000078 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:22.113 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:19:22.113 -08 000000078 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:22.113 -08 000000078 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:22.113 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:22.178 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:19:22.178 -08 000000078 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:22.178 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:22.241 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:19:22.241 -08 000000078 INF: ======================================
17-02-28 20:19:22.242 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:22.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:22.244 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.244 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:19:22.300 -08 000000085 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:19:22.300 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:22.362 -08 000000073 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:19:22.362 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:19:22.424 -08 000000039 INF: FPGA: Recv ZADCR 2426
17-02-28 20:19:22.424 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:19:22.424 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:19:22.486 -08 000000073 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:19:22.486 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:19:22.486 -08 000000018 INF: TDIScan finished after 6967.3449 ms
17-02-28 20:19:22.486 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:19:22.486 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:19:22.487 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:19:22.548 -08 000000039 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:19:22.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.550 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.550 -08 000000060 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:19:22.551 -08 000000045 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:19:22.551 -08 000000045 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:22.551 -08 000000045 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:22.551 -08 000000047 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:19:22.551 -08 000000060 INF: ======================================
17-02-28 20:19:22.551 -08 000000047 INF: ======================================
17-02-28 20:19:22.617 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:22.617 -08 000000045 INF: ======================================
17-02-28 20:19:22.618 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:19:22.659 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.659 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:19:22.697 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.698 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:19:22.733 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.733 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:19:22.765 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.766 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:22.766 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:22.767 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:19:22.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:22.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:19:22.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:19:23.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:19:23.427 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0507554057137063Best Z position at top surface = -0.121601308017947Best Z position at top surface + compensator offset = -0.0989013080179472 C:3,L:5,B
17-02-28 20:19:23.428 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.121601308017947
17-02-28 20:19:23.428 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.72905
17-02-28 20:19:23.428 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0507554057137063
17-02-28 20:19:23.428 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.38784
17-02-28 20:19:23.428 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0507554057137063.
17-02-28 20:19:23.429 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:23.562 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:19:23.562 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:19:23.611 -08 000000052 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:23.611 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:23.613 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.613 -08 000000018 INF: Lane 5, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:19:23.613 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.614 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.615 -08 000000010 INF: ===================Move Tilt Motor 2===================
17-02-28 20:19:23.615 -08 000000060 INF: ===================Move Tilt Motor 1===================
17-02-28 20:19:23.615 -08 000000051 INF: ===================Move Tilt Motor 3===================
17-02-28 20:19:23.615 -08 000000010 INF: ======================================
17-02-28 20:19:23.615 -08 000000060 INF: ======================================
17-02-28 20:19:23.615 -08 000000051 INF: ======================================
17-02-28 20:19:23.616 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.617 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.617 -08 000000018 INF: ETF Best Z: -0.0507554 mm (13305 DAC)
17-02-28 20:19:23.618 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.618 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.619 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:19:23.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.626 -08 000000018 INF: Swath 1 position calculated to be: {X=16.62733, Y=39.70494} from estimated center X= 17.122, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:19:23.626 -08 000000018 INF: Swath 2 position calculated to be: {X=17.73533, Y=39.70494} from estimated center X= 17.122, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:19:24.082 -08 000000018 INF: Swath 0: Converted transform from (86.65143, -28.18295) pixels to (0.030015, -0.00966) mm.
17-02-28 20:19:24.087 -08 000000018 INF: Swath 1: Converted transform from (70.31225, -23.32251) pixels to (0.02415, -0.007935) mm.
17-02-28 20:19:24.088 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494===================
17-02-28 20:19:24.089 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494===================
17-02-28 20:19:24.089 -08 000000018 INF: Transformed XStagePosition from 16.62733 mm to 16.6573495939374 mm.
17-02-28 20:19:24.101 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4852857397646 mm.
17-02-28 20:19:24.101 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2852857397646 mm.
17-02-28 20:19:24.101 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3760357397646 mm.
17-02-28 20:19:24.103 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:24.103 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:19:24.103 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:24.103 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = E_1
17-02-28 20:19:24.110 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:24.110 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:24.111 -08 000000058 INF: ===================MoveEmissionFilters===================
17-02-28 20:19:24.111 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:19:24.111 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:24.112 -08 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:24.112 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:19:24.112 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:24.112 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:24.112 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:24.112 -08 000000105 INF: ===================Move X,Y, Parallel===================
17-02-28 20:19:24.112 -08 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:24.113 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:24.113 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:24.113 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:24.113 -08 000000052 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:19:24.113 -08 000000052 INF: Z Motor: Moving to -0.0708 mm, started at -0.0100 mm
17-02-28 20:19:24.113 -08 000000052 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:19:24.113 -08 000000109 INF: ===================Move X Motor without settling===================
17-02-28 20:19:24.113 -08 000000109 INF: X Motor: Xmit PR VM\n
17-02-28 20:19:24.113 -08 000000108 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:19:24.113 -08 000000101 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:24.113 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:19:24.114 -08 000000069 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:19:24.114 -08 000000087 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:19:24.114 -08 000000066 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:19:24.114 -08 000000108 INF: ======================================
17-02-28 20:19:24.114 -08 000000086 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:19:24.114 -08 000000078 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:19:24.114 -08 000000036 INF: ======================================
17-02-28 20:19:24.114 -08 000000086 INF: ======================================
17-02-28 20:19:24.114 -08 000000030 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:19:24.114 -08 000000030 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:19:24.114 -08 000000066 INF: ======================================
17-02-28 20:19:24.115 -08 000000101 INF: Y Motor: Moving to 64.4853 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:19:24.115 -08 000000101 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:24.115 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:24.115 -08 000000030 INF: ======================================
17-02-28 20:19:24.115 -08 000000078 INF: ======================================
17-02-28 20:19:24.116 -08 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:24.116 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:24.117 -08 000000069 INF: ======================================
17-02-28 20:19:24.117 -08 000000087 INF: ======================================
17-02-28 20:19:24.117 -08 000000090 INF: ======================================
17-02-28 20:19:24.118 -08 000000051 INF: ======================================
17-02-28 20:19:24.118 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:24.118 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:24.119 -08 000000010 INF: ======================================
17-02-28 20:19:24.119 -08 000000060 INF: ======================================
17-02-28 20:19:24.120 -08 000000058 INF: ======================================
17-02-28 20:19:24.139 -08 000000064 INF: FPGA: Recv ZTRG 
17-02-28 20:19:24.139 -08 000000052 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:19:24.141 -08 000000109 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:19:24.141 -08 000000109 INF: X Motor: Xmit PR VI\n
17-02-28 20:19:24.141 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:19:24.141 -08 000000101 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:24.141 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:24.204 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:19:24.204 -08 000000052 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:19:24.204 -08 000000052 INF: FPGA: Xmit ZMV 18548\n
17-02-28 20:19:24.206 -08 000000109 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:19:24.206 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:19:24.206 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:24.206 -08 000000109 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:19:24.206 -08 000000109 INF: X Motor: Moving to 16.6573 mm @15.000 mm/sec, started at 17.1982 mm
17-02-28 20:19:24.206 -08 000000109 INF: X Motor: Xmit MA -17344\n
17-02-28 20:19:24.266 -08 000000034 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:19:24.266 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:19:24.268 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:19:24.268 -08 000000101 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:24.268 -08 000000101 INF: Y Motor: Set target position to 5948529 encoder counts
17-02-28 20:19:24.268 -08 000000101 INF: Y Motor: Xmit s r0xca 5948529\r
17-02-28 20:19:24.269 -08 000000109 INF: X Motor: Recv MA -17344\r\n>
17-02-28 20:19:24.269 -08 000000109 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:19:24.328 -08 000000038 INF: FPGA: Recv ZMV 
17-02-28 20:19:24.328 -08 000000052 INF: Z Motor: MoveAndTrigger 'ZMV' command took 123.7402 ms
17-02-28 20:19:24.328 -08 000000052 INF: FPGA: Xmit ZDACR\n
17-02-28 20:19:24.330 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:19:24.330 -08 000000101 INF: Y Motor: Start the move command
17-02-28 20:19:24.330 -08 000000101 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:24.390 -08 000000077 INF: FPGA: Recv ZDACR 18548
17-02-28 20:19:24.390 -08 000000052 INF: Z Motor: MoveAndTrigger took 277.0077 ms w/comms
17-02-28 20:19:24.390 -08 000000052 INF: Z Motor: After move to -0.0708, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:19:24.390 -08 000000052 INF: Z Motor: MoveAbsStepped took 277.1746 ms
17-02-28 20:19:24.390 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:24.392 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:19:24.392 -08 000000101 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:19:24.392 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:19:24.392 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:24.393 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:24.393 -08 000000073 INF: ===================Camera Arm TDI===================
17-02-28 20:19:24.393 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:24.394 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:24.394 -08 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:24.394 -08 000000073 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:24.395 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:24.395 -08 000000086 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:19:24.452 -08 000000081 INF: FPGA: Recv ZSEL 
17-02-28 20:19:24.453 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:24.453 -08 000000086 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:19:24.515 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:19:24.515 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:24.516 -08 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:24.517 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:24.518 -08 000000101 INF: Y Motor: Unshifted Position: 5875106
17-02-28 20:19:24.518 -08 000000086 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:19:24.519 -08 000000086 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:19:24.519 -08 000000086 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:19:24.568 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:24.576 -08 000000036 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:24.576 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:24.578 -08 000000086 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:19:24.578 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:24.580 -08 000000086 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:19:24.580 -08 000000086 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:19:24.580 -08 000000086 INF: Z Motor: Arming to move to -0.0308 mm
17-02-28 20:19:24.580 -08 000000086 INF: FPGA: Xmit ZYT 6428529 4\n
17-02-28 20:19:24.639 -08 000000077 INF: FPGA: Recv ZYT 
17-02-28 20:19:24.639 -08 000000086 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6375106 enc / 63.751 mm / ) = 6428529 enc / 64.285 mm
17-02-28 20:19:24.639 -08 000000086 INF: FPGA: Xmit ZARM 8062\n
17-02-28 20:19:24.692 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:24.703 -08 000000064 INF: FPGA: Recv ZARM
17-02-28 20:19:24.703 -08 000000086 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 63.9907 ms
17-02-28 20:19:24.703 -08 000000086 INF: Z Motor: ArmAbsStepped took 122.669 ms
17-02-28 20:19:24.703 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:24.705 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:24.705 -08 000000109 INF: X Motor: Xmit PR ER\n
17-02-28 20:19:24.706 -08 000000086 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:19:24.707 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:24.708 -08 000000086 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:19:24.708 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:24.710 -08 000000086 INF: ======================================
17-02-28 20:19:24.767 -08 000000109 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:19:24.767 -08 000000109 INF: X Motor: Moved to 16.6563 after 498 ms
17-02-28 20:19:24.767 -08 000000109 INF: ======================================
17-02-28 20:19:24.829 -08 000000101 INF: Y Motor: Unshifted Position: 5948530
17-02-28 20:19:24.829 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:24.829 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:24.891 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:19:24.891 -08 000000101 INF: Y Motor: Moved to 64.4853 after 499 ms
17-02-28 20:19:24.891 -08 000000101 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:24.953 -08 000000101 INF: Y Motor: Recv v 4096\r
17-02-28 20:19:24.953 -08 000000101 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:24.953 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:25.015 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:19:25.015 -08 000000101 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:25.015 -08 000000101 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:25.077 -08 000000101 INF: Y Motor: Recv v 402653184\r
17-02-28 20:19:25.077 -08 000000101 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:19:25.077 -08 000000101 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:25.077 -08 000000101 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:25.142 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:19:25.142 -08 000000101 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:25.142 -08 000000101 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:25.142 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:25.204 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:19:25.204 -08 000000101 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:25.204 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:25.266 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:19:25.266 -08 000000101 INF: ======================================
17-02-28 20:19:25.267 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:19:25.268 -08 000000105 INF: ======================================
17-02-28 20:19:25.357 -08 000000073 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:25.358 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:25.358 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:25.373 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:25.375 -08 000000073 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:26.417 -08 000000073 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:26.417 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:26.417 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:26.433 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:26.435 -08 000000073 INF: ===================Camera Arm TDI===================
17-02-28 20:19:26.436 -08 000000073 INF: ======================================
17-02-28 20:19:26.437 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:26.438 -08 000000052 INF: ======================================
17-02-28 20:19:26.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:26.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:26.440 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:19:26.440 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:19:26.513 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:26.513 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:19:26.576 -08 000000036 INF: FPGA: Recv ZFREQCL
17-02-28 20:19:26.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:19:26.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:26.576 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:26.592 -08 000000073 INF: RunCopyService queue size at 2/28/2017 8:19:26 PM is 2
17-02-28 20:19:26.636 -08 000000089 INF: FPGA: Recv TDIYERD 6448530
17-02-28 20:19:26.636 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448530 counts (64.485 mm)
17-02-28 20:19:26.636 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:26.637 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:26.637 -08 000000078 INF: ===================TDI FPGA Arm===================
17-02-28 20:19:26.637 -08 000000075 INF: ===================Set YMotor gains for scans===================
17-02-28 20:19:26.638 -08 000000075 INF: ======================================
17-02-28 20:19:26.638 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:26.639 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:19:26.639 -08 000000078 INF: FPGA: Xmit TDIYPOS 6337604\n
17-02-28 20:19:26.701 -08 000000072 INF: FPGA: Recv TDIYPOS
17-02-28 20:19:26.701 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:26.703 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:19:26.703 -08 000000078 INF: FPGA: Xmit TDIYARM3 139264 6428529 1 1\n
17-02-28 20:19:26.763 -08 000000058 INF: FPGA: Recv TDIYARM3
17-02-28 20:19:26.763 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:26.764 -08 000000078 INF: ===================TDI FPGA Arm===================
17-02-28 20:19:26.765 -08 000000078 INF: ======================================
17-02-28 20:19:26.766 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:26.767 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:26.767 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:26.768 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:26.768 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:26.769 -08 000000109 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:19:26.769 -08 000000025 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:19:26.769 -08 000000109 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:19:26.769 -08 000000109 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:19:26.769 -08 000000109 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:19:26.769 -08 000000025 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:19:26.769 -08 000000109 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:19:26.769 -08 000000025 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:19:26.769 -08 000000025 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:19:26.772 -08 000000025 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:19:27.135 -08 000000057 INF: FPGA: Recv EX1MV
17-02-28 20:19:27.135 -08 000000057 INF: FPGA: Recv EX2MV
17-02-28 20:19:27.135 -08 000000025 INF: Excitation Filter 2: Moved -107 steps in 365.5278 ms
17-02-28 20:19:27.135 -08 000000025 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.6544 ms
17-02-28 20:19:27.135 -08 000000025 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.7255 ms
17-02-28 20:19:27.135 -08 000000109 INF: Excitation Filter 1: Moved -107 steps in 365.7244 ms
17-02-28 20:19:27.135 -08 000000109 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.9121 ms
17-02-28 20:19:27.135 -08 000000109 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.9783 ms
17-02-28 20:19:27.135 -08 000000025 INF: ======================================
17-02-28 20:19:27.135 -08 000000109 INF: ======================================
17-02-28 20:19:27.136 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:27.137 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:27.138 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:19:27.138 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:27.138 -08 000000060 INF: ===================FPGA Z Wait===================
17-02-28 20:19:27.138 -08 000000045 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:27.138 -08 000000045 INF: Y Motor: Moving to 14.8369 mm @6.500 mm/sec, started at 64.4853 mm
17-02-28 20:19:27.139 -08 000000045 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:27.139 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:27.139 -08 000000036 INF: ===================Camera TDI, Parallel===================
17-02-28 20:19:27.139 -08 000000050 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:19:27.139 -08 000000050 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:19:27.140 -08 000000060 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:19:27.140 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:19:27.140 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:19:27.142 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:27.142 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:27.144 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:27.144 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:27.202 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:27.202 -08 000000045 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:27.202 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:27.264 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:27.264 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:27.292 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:27.292 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:27.294 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:27.294 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:27.326 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:19:27.326 -08 000000045 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:27.326 -08 000000045 INF: Y Motor: Set target position to 983695 encoder counts
17-02-28 20:19:27.326 -08 000000045 INF: Y Motor: Xmit s r0xca 983695\r
17-02-28 20:19:27.390 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:27.390 -08 000000045 INF: Y Motor: Start the move command
17-02-28 20:19:27.390 -08 000000045 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:27.442 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:27.442 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:27.444 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:27.444 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:27.450 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:27.450 -08 000000045 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:19:27.450 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:27.511 -08 000000086 INF: FPGA: Recv ZWAIT 
17-02-28 20:19:27.512 -08 000000060 INF: ======================================
17-02-28 20:19:27.575 -08 000000045 INF: Y Motor: Unshifted Position: 5886461
17-02-28 20:19:27.592 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:27.592 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:27.592 -08 000000033 INF: ===================Camera #0 Frame #4===================
17-02-28 20:19:27.594 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:27.594 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:27.594 -08 000000085 INF: ===================Camera #2 Frame #5===================
17-02-28 20:19:27.625 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:27.749 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:27.755 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:19:27.755 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:19:27.755 -08 000000033 INF: ===================Camera #0 Frame #10===================
17-02-28 20:19:27.761 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:19:27.761 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:19:27.761 -08 000000085 INF: ===================Camera #2 Frame #11===================
17-02-28 20:19:27.890 -08 000000045 INF: Y Motor: Unshifted Position: 5683009
17-02-28 20:19:27.923 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:19:27.923 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:19:27.923 -08 000000033 INF: ===================Camera #0 Frame #17===================
17-02-28 20:19:27.930 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:19:27.930 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:19:27.930 -08 000000085 INF: ===================Camera #2 Frame #17===================
17-02-28 20:19:27.940 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.062 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.095 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:19:28.095 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:19:28.095 -08 000000033 INF: ===================Camera #0 Frame #23===================
17-02-28 20:19:28.099 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:19:28.099 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:19:28.099 -08 000000085 INF: ===================Camera #2 Frame #23===================
17-02-28 20:19:28.198 -08 000000045 INF: Y Motor: Unshifted Position: 5481945
17-02-28 20:19:28.248 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.263 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:19:28.263 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:19:28.263 -08 000000033 INF: ===================Camera #0 Frame #29===================
17-02-28 20:19:28.268 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:19:28.268 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:19:28.268 -08 000000085 INF: ===================Camera #2 Frame #29===================
17-02-28 20:19:28.375 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.431 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:19:28.431 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:19:28.431 -08 000000033 INF: ===================Camera #0 Frame #35===================
17-02-28 20:19:28.437 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:19:28.437 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:19:28.437 -08 000000085 INF: ===================Camera #2 Frame #36===================
17-02-28 20:19:28.512 -08 000000045 INF: Y Motor: Unshifted Position: 5278495
17-02-28 20:19:28.562 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.600 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:19:28.600 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:19:28.600 -08 000000033 INF: ===================Camera #0 Frame #42===================
17-02-28 20:19:28.610 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:19:28.610 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:19:28.610 -08 000000085 INF: ===================Camera #2 Frame #42===================
17-02-28 20:19:28.685 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.772 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:19:28.772 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:19:28.772 -08 000000033 INF: ===================Camera #0 Frame #48===================
17-02-28 20:19:28.779 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:19:28.779 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:19:28.779 -08 000000085 INF: ===================Camera #2 Frame #48===================
17-02-28 20:19:28.824 -08 000000045 INF: Y Motor: Unshifted Position: 5074823
17-02-28 20:19:28.874 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.942 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:19:28.942 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:19:28.942 -08 000000033 INF: ===================Camera #0 Frame #54===================
17-02-28 20:19:28.949 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:19:28.949 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:19:28.949 -08 000000085 INF: ===================Camera #2 Frame #54===================
17-02-28 20:19:28.998 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.112 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:19:29.112 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:19:29.112 -08 000000033 INF: ===================Camera #0 Frame #60===================
17-02-28 20:19:29.120 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:19:29.120 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:19:29.120 -08 000000085 INF: ===================Camera #2 Frame #61===================
17-02-28 20:19:29.135 -08 000000045 INF: Y Motor: Unshifted Position: 4872676
17-02-28 20:19:29.185 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.282 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:19:29.282 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:19:29.282 -08 000000033 INF: ===================Camera #0 Frame #67===================
17-02-28 20:19:29.294 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:19:29.294 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:19:29.294 -08 000000085 INF: ===================Camera #2 Frame #67===================
17-02-28 20:19:29.311 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.447 -08 000000045 INF: Y Motor: Unshifted Position: 4669657
17-02-28 20:19:29.455 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:19:29.455 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:19:29.455 -08 000000033 INF: ===================Camera #0 Frame #73===================
17-02-28 20:19:29.465 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:19:29.465 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:19:29.465 -08 000000085 INF: ===================Camera #2 Frame #73===================
17-02-28 20:19:29.497 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.621 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.625 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:19:29.625 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:19:29.625 -08 000000033 INF: ===================Camera #0 Frame #79===================
17-02-28 20:19:29.635 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:19:29.635 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:19:29.635 -08 000000085 INF: ===================Camera #2 Frame #80===================
17-02-28 20:19:29.776 -08 000000045 INF: Y Motor: Unshifted Position: 4457745
17-02-28 20:19:29.795 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:19:29.795 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:19:29.795 -08 000000033 INF: ===================Camera #0 Frame #86===================
17-02-28 20:19:29.808 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:19:29.808 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:19:29.808 -08 000000085 INF: ===================Camera #2 Frame #86===================
17-02-28 20:19:29.826 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.949 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.968 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:19:29.968 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:19:29.968 -08 000000033 INF: ===================Camera #0 Frame #92===================
17-02-28 20:19:29.979 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:19:29.979 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:19:29.979 -08 000000085 INF: ===================Camera #2 Frame #92===================
17-02-28 20:19:30.087 -08 000000045 INF: Y Motor: Unshifted Position: 4253442
17-02-28 20:19:30.137 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:30.138 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:19:30.138 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:19:30.138 -08 000000033 INF: ===================Camera #0 Frame #98===================
17-02-28 20:19:30.149 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:19:30.149 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:19:30.150 -08 000000085 INF: ===================Camera #2 Frame #99===================
17-02-28 20:19:30.260 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:30.308 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:19:30.308 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:19:30.308 -08 000000033 INF: ===================Camera #0 Frame #104===================
17-02-28 20:19:30.324 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:19:30.324 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:19:30.324 -08 000000085 INF: ===================Camera #2 Frame #105===================
17-02-28 20:19:30.398 -08 000000045 INF: Y Motor: Unshifted Position: 4051280
17-02-28 20:19:30.448 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:30.478 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:19:30.478 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:19:30.479 -08 000000033 INF: ===================Camera #0 Frame #111===================
17-02-28 20:19:30.495 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:19:30.495 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:19:30.495 -08 000000085 INF: ===================Camera #2 Frame #111===================
17-02-28 20:19:30.574 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:30.652 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:19:30.652 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:19:30.652 -08 000000033 INF: ===================Camera #0 Frame #117===================
17-02-28 20:19:30.666 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:19:30.666 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:19:30.666 -08 000000085 INF: ===================Camera #2 Frame #118===================
17-02-28 20:19:30.710 -08 000000045 INF: Y Motor: Unshifted Position: 3848264
17-02-28 20:19:30.760 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:30.821 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:19:30.821 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:19:30.821 -08 000000033 INF: ===================Camera #0 Frame #123===================
17-02-28 20:19:30.840 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:19:30.840 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:19:30.840 -08 000000085 INF: ===================Camera #2 Frame #124===================
17-02-28 20:19:30.886 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:30.991 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:19:30.991 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:19:30.991 -08 000000033 INF: ===================Camera #0 Frame #130===================
17-02-28 20:19:31.011 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:19:31.011 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:19:31.011 -08 000000085 INF: ===================Camera #2 Frame #130===================
17-02-28 20:19:31.024 -08 000000045 INF: Y Motor: Unshifted Position: 3646111
17-02-28 20:19:31.074 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:31.164 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:19:31.164 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:19:31.164 -08 000000033 INF: ===================Camera #0 Frame #136===================
17-02-28 20:19:31.182 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:19:31.182 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:19:31.182 -08 000000085 INF: ===================Camera #2 Frame #137===================
17-02-28 20:19:31.197 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:31.333 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:19:31.333 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:19:31.333 -08 000000033 INF: ===================Camera #0 Frame #142===================
17-02-28 20:19:31.335 -08 000000045 INF: Y Motor: Unshifted Position: 3441795
17-02-28 20:19:31.356 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:19:31.356 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:19:31.356 -08 000000085 INF: ===================Camera #2 Frame #143===================
17-02-28 20:19:31.385 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:31.502 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:19:31.502 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:19:31.502 -08 000000033 INF: ===================Camera #0 Frame #148===================
17-02-28 20:19:31.508 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:31.527 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:19:31.527 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:19:31.527 -08 000000085 INF: ===================Camera #2 Frame #149===================
17-02-28 20:19:31.648 -08 000000045 INF: Y Motor: Unshifted Position: 3240080
17-02-28 20:19:31.671 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:19:31.671 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:19:31.671 -08 000000033 INF: ===================Camera #0 Frame #155===================
17-02-28 20:19:31.698 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:31.698 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:19:31.698 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:19:31.698 -08 000000085 INF: ===================Camera #2 Frame #156===================
17-02-28 20:19:31.821 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:31.844 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:19:31.844 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:19:31.844 -08 000000033 INF: ===================Camera #0 Frame #161===================
17-02-28 20:19:31.872 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:19:31.872 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:19:31.872 -08 000000085 INF: ===================Camera #2 Frame #162===================
17-02-28 20:19:31.959 -08 000000045 INF: Y Motor: Unshifted Position: 3035985
17-02-28 20:19:32.009 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:32.014 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:19:32.014 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:19:32.014 -08 000000033 INF: ===================Camera #0 Frame #167===================
17-02-28 20:19:32.043 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:19:32.043 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:19:32.043 -08 000000085 INF: ===================Camera #2 Frame #168===================
17-02-28 20:19:32.132 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:32.184 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:19:32.184 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:19:32.184 -08 000000033 INF: ===================Camera #0 Frame #173===================
17-02-28 20:19:32.214 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:19:32.214 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:19:32.214 -08 000000085 INF: ===================Camera #2 Frame #175===================
17-02-28 20:19:32.270 -08 000000045 INF: Y Motor: Unshifted Position: 2833835
17-02-28 20:19:32.320 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:32.354 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:19:32.354 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:19:32.354 -08 000000033 INF: ===================Camera #0 Frame #180===================
17-02-28 20:19:32.388 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:19:32.388 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:19:32.388 -08 000000085 INF: ===================Camera #2 Frame #181===================
17-02-28 20:19:32.446 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:32.527 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:19:32.527 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:19:32.527 -08 000000033 INF: ===================Camera #0 Frame #186===================
17-02-28 20:19:32.559 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:19:32.559 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:19:32.559 -08 000000085 INF: ===================Camera #2 Frame #187===================
17-02-28 20:19:32.582 -08 000000045 INF: Y Motor: Unshifted Position: 2631478
17-02-28 20:19:32.632 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:32.696 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:19:32.696 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:19:32.696 -08 000000033 INF: ===================Camera #0 Frame #192===================
17-02-28 20:19:32.730 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:19:32.730 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:19:32.730 -08 000000085 INF: ===================Camera #2 Frame #194===================
17-02-28 20:19:32.758 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:32.866 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:19:32.866 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:19:32.866 -08 000000033 INF: ===================Camera #0 Frame #199===================
17-02-28 20:19:32.893 -08 000000045 INF: Y Motor: Unshifted Position: 2428678
17-02-28 20:19:32.904 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:19:32.904 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:19:32.904 -08 000000085 INF: ===================Camera #2 Frame #200===================
17-02-28 20:19:32.943 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.039 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:19:33.039 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:19:33.039 -08 000000033 INF: ===================Camera #0 Frame #205===================
17-02-28 20:19:33.069 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.075 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:19:33.075 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:19:33.075 -08 000000085 INF: ===================Camera #2 Frame #206===================
17-02-28 20:19:33.207 -08 000000045 INF: Y Motor: Unshifted Position: 2224366
17-02-28 20:19:33.209 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:19:33.209 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:19:33.209 -08 000000033 INF: ===================Camera #0 Frame #211===================
17-02-28 20:19:33.246 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:19:33.246 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:19:33.246 -08 000000085 INF: ===================Camera #2 Frame #213===================
17-02-28 20:19:33.257 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.378 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:19:33.378 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:19:33.378 -08 000000033 INF: ===================Camera #0 Frame #217===================
17-02-28 20:19:33.380 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.419 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:19:33.419 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:19:33.419 -08 000000085 INF: ===================Camera #2 Frame #219===================
17-02-28 20:19:33.518 -08 000000045 INF: Y Motor: Unshifted Position: 2022003
17-02-28 20:19:33.548 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:19:33.548 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:19:33.548 -08 000000033 INF: ===================Camera #0 Frame #224===================
17-02-28 20:19:33.568 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.588 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:19:33.588 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:19:33.588 -08 000000085 INF: ===================Camera #2 Frame #225===================
17-02-28 20:19:33.694 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.721 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:19:33.721 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:19:33.721 -08 000000033 INF: ===================Camera #0 Frame #230===================
17-02-28 20:19:33.759 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:19:33.759 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:19:33.759 -08 000000085 INF: ===================Camera #2 Frame #231===================
17-02-28 20:19:33.829 -08 000000045 INF: Y Motor: Unshifted Position: 1819840
17-02-28 20:19:33.879 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.891 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:19:33.891 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:19:33.891 -08 000000033 INF: ===================Camera #0 Frame #236===================
17-02-28 20:19:33.930 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:19:33.930 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:19:33.930 -08 000000085 INF: ===================Camera #2 Frame #238===================
17-02-28 20:19:34.005 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:34.061 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:19:34.061 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:19:34.061 -08 000000033 INF: ===================Camera #0 Frame #243===================
17-02-28 20:19:34.104 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:19:34.104 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:19:34.104 -08 000000085 INF: ===================Camera #2 Frame #244===================
17-02-28 20:19:34.143 -08 000000045 INF: Y Motor: Unshifted Position: 1615747
17-02-28 20:19:34.193 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:34.234 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:19:34.234 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:19:34.234 -08 000000033 INF: ===================Camera #0 Frame #249===================
17-02-28 20:19:34.275 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:19:34.275 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:19:34.275 -08 000000085 INF: ===================Camera #2 Frame #250===================
17-02-28 20:19:34.316 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:34.404 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:19:34.404 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:19:34.404 -08 000000033 INF: ===================Camera #0 Frame #255===================
17-02-28 20:19:34.446 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:19:34.446 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:19:34.446 -08 000000085 INF: ===================Camera #2 Frame #257===================
17-02-28 20:19:34.454 -08 000000045 INF: Y Motor: Unshifted Position: 1413372
17-02-28 20:19:34.504 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:34.574 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:19:34.574 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:19:34.574 -08 000000033 INF: ===================Camera #0 Frame #261===================
17-02-28 20:19:34.619 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:19:34.619 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:19:34.619 -08 000000085 INF: ===================Camera #2 Frame #263===================
17-02-28 20:19:34.630 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:34.744 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:19:34.744 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:19:34.744 -08 000000033 INF: ===================Camera #0 Frame #268===================
17-02-28 20:19:34.766 -08 000000045 INF: Y Motor: Unshifted Position: 1210352
17-02-28 20:19:34.790 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:19:34.790 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:19:34.790 -08 000000085 INF: ===================Camera #2 Frame #269===================
17-02-28 20:19:34.816 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:34.875 -08 000000025 INF: FPGA: Recv TDIYWAIT
17-02-28 20:19:34.875 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:34.877 -08 000000050 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:19:34.878 -08 000000060 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:19:34.878 -08 000000073 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:19:34.878 -08 000000060 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:19:34.878 -08 000000060 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:19:34.878 -08 000000060 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:19:34.878 -08 000000073 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:19:34.878 -08 000000060 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:19:34.878 -08 000000073 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:19:34.878 -08 000000073 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:19:34.879 -08 000000073 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:19:34.916 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:34.916 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:34.916 -08 000000033 INF: ===================Camera #0 Frame #272===================
17-02-28 20:19:34.929 -08 000000033 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:34.930 -08 000000033 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:34.942 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:35.077 -08 000000045 INF: Y Motor: Unshifted Position: 1008211
17-02-28 20:19:35.090 -08 000000033 INF: Camera #0 ReleaseBuffer
17-02-28 20:19:35.090 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:35.090 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:35.090 -08 000000085 INF: ===================Camera #2 Frame #272===================
17-02-28 20:19:35.090 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:19:35.099 -08 000000085 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:35.100 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:35.123 -08 000000033 INF: ======================================
17-02-28 20:19:35.127 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:35.249 -08 000000086 INF: FPGA: Recv EX1MV
17-02-28 20:19:35.249 -08 000000086 INF: FPGA: Recv EX2MV
17-02-28 20:19:35.249 -08 000000060 INF: Excitation Filter 1: Moved 107 steps in 370.573 ms
17-02-28 20:19:35.249 -08 000000073 INF: Excitation Filter 2: Moved 107 steps in 370.4582 ms
17-02-28 20:19:35.249 -08 000000073 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.665 ms
17-02-28 20:19:35.249 -08 000000073 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.7741 ms
17-02-28 20:19:35.249 -08 000000060 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.684 ms
17-02-28 20:19:35.249 -08 000000060 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.1961 ms
17-02-28 20:19:35.249 -08 000000073 INF: ======================================
17-02-28 20:19:35.249 -08 000000060 INF: ======================================
17-02-28 20:19:35.251 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:35.252 -08 000000050 INF: ======================================
17-02-28 20:19:35.265 -08 000000045 INF: Y Motor: Unshifted Position: 983693
17-02-28 20:19:35.265 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:35.265 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:35.294 -08 000000085 INF: Camera #2 ReleaseBuffer
17-02-28 20:19:35.294 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:19:35.329 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:19:35.329 -08 000000045 INF: Y Motor: Moved to 14.8369 after 7879 ms
17-02-28 20:19:35.329 -08 000000045 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:35.329 -08 000000085 INF: ======================================
17-02-28 20:19:35.330 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:19:35.331 -08 000000036 INF: ======================================
17-02-28 20:19:35.391 -08 000000045 INF: Y Motor: Recv v 4097\r
17-02-28 20:19:35.391 -08 000000045 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:35.391 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:35.453 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:19:35.453 -08 000000045 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:35.453 -08 000000045 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:35.514 -08 000000045 INF: Y Motor: Recv v 134217728\r
17-02-28 20:19:35.514 -08 000000045 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:19:35.514 -08 000000045 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:35.514 -08 000000045 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:35.579 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:19:35.579 -08 000000045 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:35.579 -08 000000045 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:35.579 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:35.639 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:35.639 -08 000000045 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:35.639 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:35.701 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:35.701 -08 000000045 INF: ======================================
17-02-28 20:19:35.702 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:35.703 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:35.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:35.704 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:19:35.748 -08 000000078 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:19:35.748 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:35.812 -08 000000057 INF: FPGA: Recv TDIYERD 1483696
17-02-28 20:19:35.812 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:19:35.872 -08 000000030 INF: FPGA: Recv ZADCR 17753
17-02-28 20:19:35.872 -08 000000018 INF: At scan end Y pos = 14.837 and Z pos = -0.068. Y moved -48.539 mm
17-02-28 20:19:35.872 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:19:35.935 -08 000000053 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:19:35.935 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:19:35.936 -08 000000018 INF: TDIScan finished after 11846.0464 ms
17-02-28 20:19:35.936 -08 000000018 INF: Image[0]: Y should trigger at 63.376 mm, 2nd row was at 64.285 mm (error = 0.909 mm)
17-02-28 20:19:35.936 -08 000000018 INF: Image[2]: Y should trigger at 63.376 mm, 2nd row was at 64.285 mm (error = 0.909 mm)
17-02-28 20:19:35.938 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:35.971 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.890 um
17-02-28 20:19:35.971 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:35.972 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:19:35.998 -08 000000010 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:19:35.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:35.999 -08 000000034 INF: ===================Dither Clean Up Command===================
17-02-28 20:19:35.999 -08 000000082 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:19:35.999 -08 000000077 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:19:35.999 -08 000000064 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:19:36.000 -08 000000077 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:36.000 -08 000000077 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:36.000 -08 000000082 INF: ======================================
17-02-28 20:19:36.000 -08 000000064 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:19:36.000 -08 000000064 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:19:36.000 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:36.000 -08 000000025 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:36.001 -08 000000058 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:19:36.003 -08 000000025 INF: ===================LFT:Extracting coords===================
17-02-28 20:19:36.029 -08 000000025 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:36.029 -08 000000025 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:19:36.030 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.030 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.030 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.030 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.030 -08 000000078 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:36.031 -08 000000081 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:36.031 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:36.031 -08 000000047 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:36.061 -08 000000045 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:36.061 -08 000000045 INF: FPGA: Recv ZSEL 
17-02-28 20:19:36.061 -08 000000058 INF: FPGA: Xmit ZDACW 18548\n
17-02-28 20:19:36.062 -08 000000064 INF: ======================================
17-02-28 20:19:36.077 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:36.077 -08 000000077 INF: ======================================
17-02-28 20:19:36.107 -08 000000078 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:36.107 -08 000000052 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:36.107 -08 000000081 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:36.107 -08 000000047 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:36.121 -08 000000050 INF: FPGA: Recv ZDACW 
17-02-28 20:19:36.121 -08 000000058 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:19:36.122 -08 000000058 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:19:36.184 -08 000000053 INF: FPGA: Recv TDIBB
17-02-28 20:19:36.184 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:36.185 -08 000000058 INF: ======================================
17-02-28 20:19:36.260 -08 000000078 INF: LFT found best fwhm score 2.000102 in 152 ms
17-02-28 20:19:36.260 -08 000000052 INF: LFT found best fwhm score 2.006898 in 152 ms
17-02-28 20:19:36.260 -08 000000078 INF: LFT found good score at index 3645 with fwhm value 2.000102. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:5,B
17-02-28 20:19:36.260 -08 000000052 INF: LFT found good score at index 7097 with fwhm value 2.006898. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:5,B
17-02-28 20:19:36.260 -08 000000081 INF: LFT found best fwhm score 2.00003 in 152 ms
17-02-28 20:19:36.260 -08 000000081 INF: LFT found good score at index 2713 with fwhm value 2.00003. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:5,B
17-02-28 20:19:36.260 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.260 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.260 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.261 -08 000000078 INF: ======================================
17-02-28 20:19:36.261 -08 000000047 INF: LFT found best fwhm score 2.000798 in 153 ms
17-02-28 20:19:36.261 -08 000000047 INF: LFT found good score at index 3713 with fwhm value 2.000798. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:5,B
17-02-28 20:19:36.261 -08 000000081 INF: ======================================
17-02-28 20:19:36.261 -08 000000052 INF: ======================================
17-02-28 20:19:36.261 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.261 -08 000000047 INF: ======================================
17-02-28 20:19:36.262 -08 000000025 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:36.263 -08 000000025 INF: LFT weighted average best Z for bottom surface is at -0.050mm FC:A, C:3,L:5,B
17-02-28 20:19:36.263 -08 000000025 INF: ======================================
17-02-28 20:19:36.264 -08 000000034 INF: ======================================
17-02-28 20:19:36.265 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.266 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:19:36.266 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.266 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:19:36.266 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:19:36.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:19:36.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494===================
17-02-28 20:19:36.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494===================
17-02-28 20:19:36.268 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:19:36.268 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494===================
17-02-28 20:19:36.268 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:19:36.268 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:19:36.291 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:19:36.291 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:36.292 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494===================
17-02-28 20:19:36.292 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.292 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494===================
17-02-28 20:19:36.292 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:19:36.292 -08 000000018 INF: Transformed XStagePosition from 17.73533 mm to 17.7594843972474 mm.
17-02-28 20:19:36.333 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4870107400939 mm.
17-02-28 20:19:36.333 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2870107400939 mm.
17-02-28 20:19:36.333 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3777607400939 mm.
17-02-28 20:19:36.339 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.340 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:19:36.340 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.341 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -70.8 um, section = E_1
17-02-28 20:19:36.343 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":5,"Tile":2104,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF244","HCSMMF237","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.344 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:36.345 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:36.349 -08 000000050 INF: ===================MoveEmissionFilters===================
17-02-28 20:19:36.362 -08 000000038 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:36.363 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:36.363 -08 000000038 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:19:36.364 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:36.364 -08 000000038 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:19:36.364 -08 000000038 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:36.366 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:36.367 -08 000000038 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:19:36.367 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:36.371 -08 000000087 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:19:36.371 -08 000000073 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:36.372 -08 000000087 INF: ======================================
17-02-28 20:19:36.372 -08 000000073 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:36.372 -08 000000066 INF: ===================TDI Scan Setup===================
17-02-28 20:19:36.373 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:36.373 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:36.374 -08 000000052 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:19:36.374 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:19:36.374 -08 000000030 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:19:36.374 -08 000000030 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:19:36.374 -08 000000066 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:36.374 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:36.374 -08 000000030 INF: ======================================
17-02-28 20:19:36.374 -08 000000066 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:36.374 -08 000000058 INF: ===================Move X,Y, Parallel===================
17-02-28 20:19:36.375 -08 000000066 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:19:36.375 -08 000000052 INF: ======================================
17-02-28 20:19:36.376 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:36.376 -08 000000034 INF: ===================Camera Arm TDI===================
17-02-28 20:19:36.376 -08 000000030 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:19:36.377 -08 000000030 INF: ======================================
17-02-28 20:19:36.377 -08 000000052 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:19:36.377 -08 000000086 INF: ======================================
17-02-28 20:19:36.377 -08 000000025 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:19:36.377 -08 000000034 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:36.377 -08 000000052 INF: ======================================
17-02-28 20:19:36.378 -08 000000025 INF: ======================================
17-02-28 20:19:36.378 -08 000000075 INF: ===================Move X Motor without settling===================
17-02-28 20:19:36.378 -08 000000075 INF: X Motor: Xmit PR VM\n
17-02-28 20:19:36.378 -08 000000034 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:36.379 -08 000000030 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:19:36.379 -08 000000086 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:19:36.379 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:36.379 -08 000000030 INF: ======================================
17-02-28 20:19:36.379 -08 000000052 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:36.379 -08 000000052 INF: Y Motor: Moving to 64.4870 mm @25.000 mm/sec, started at 14.8369 mm
17-02-28 20:19:36.380 -08 000000086 INF: ======================================
17-02-28 20:19:36.380 -08 000000052 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:36.380 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:36.380 -08 000000078 INF: ======================================
17-02-28 20:19:36.380 -08 000000073 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:36.381 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:36.382 -08 000000073 INF: ======================================
17-02-28 20:19:36.382 -08 000000087 INF: ======================================
17-02-28 20:19:36.383 -08 000000050 INF: ======================================
17-02-28 20:19:36.435 -08 000000085 INF: FPGA: Recv ZSEL 
17-02-28 20:19:36.436 -08 000000066 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:36.437 -08 000000066 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:19:36.453 -08 000000075 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:19:36.453 -08 000000075 INF: X Motor: Xmit PR VI\n
17-02-28 20:19:36.453 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:36.453 -08 000000052 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:36.453 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:36.502 -08 000000085 INF: FPGA: Recv TDIBB
17-02-28 20:19:36.503 -08 000000066 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:36.504 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":5,"Tile":2103,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF194","HCSMMF180","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.504 -08 000000066 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:36.504 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":5,"Tile":2106,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF254","HCSMMF267","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.505 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:36.505 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":5,"Tile":2102,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF205","HCSMMF287","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.506 -08 000000066 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:19:36.507 -08 000000066 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:19:36.507 -08 000000066 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:19:36.507 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":5,"Tile":2105,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF273","HCSMMF250","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.507 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":5,"Tile":2108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF243","HCSMMF213","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.508 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":5,"Tile":2112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF222","HCSMMF202","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.509 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":5,"Tile":2107,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF193","HCSMMF179","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.510 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":5,"Tile":2101,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF228","HCSMMF265","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.510 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":5,"Tile":2109,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF232","HCSMMF284","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.511 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":5,"Tile":2110,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF269","HCSMMF214","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.512 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":5,"Tile":2111,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF263","HCSMMF196","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.512 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":5,"Tile":2113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF255","HCSMMF203","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.513 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:36.513 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:36.513 -08 000000075 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:19:36.513 -08 000000075 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:19:36.513 -08 000000075 INF: X Motor: Moving to 17.7595 mm @15.000 mm/sec, started at 16.6563 mm
17-02-28 20:19:36.513 -08 000000075 INF: X Motor: Xmit MA -16892\n
17-02-28 20:19:36.513 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":5,"Tile":2114,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF207","HCSMMF230","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.514 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":5,"Tile":2116,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF268","HCSMMF282","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.515 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":5,"Tile":2118,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF285","HCSMMF281","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.515 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":5,"Tile":2115,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF185","HCSMMF240","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.516 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":5,"Tile":2119,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF239","HCSMMF276","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.517 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":5,"Tile":2117,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF283","HCSMMF187","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.518 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":5,"Tile":2121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF278","HCSMMF286","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.519 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":5,"Tile":2120,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF209","HCSMMF257","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.520 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":5,"Tile":2122,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF201","HCSMMF272","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.520 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":5,"Tile":2123,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF274","HCSMMF198","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.521 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":5,"Tile":2124,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF260","HCSMMF176","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.522 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":5,"Tile":2125,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF181","HCSMMF271","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.522 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":5,"Tile":2127,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF226","HCSMMF192","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.525 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":5,"Tile":2126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF251","HCSMMF277","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.527 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":5,"Tile":2128,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF225","HCSMMF215","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.542 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.548 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:19:36.562 -08 000000072 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:36.563 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:36.565 -08 000000066 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:19:36.565 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:36.567 -08 000000066 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:19:36.567 -08 000000066 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:19:36.567 -08 000000066 INF: Z Motor: Arming to move to -0.0308 mm
17-02-28 20:19:36.567 -08 000000066 INF: FPGA: Xmit ZYT 6428701 4\n
17-02-28 20:19:36.577 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:19:36.577 -08 000000052 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:36.577 -08 000000075 INF: X Motor: Recv MA -16892\r\n>
17-02-28 20:19:36.577 -08 000000052 INF: Y Motor: Set target position to 5948701 encoder counts
17-02-28 20:19:36.577 -08 000000052 INF: Y Motor: Xmit s r0xca 5948701\r
17-02-28 20:19:36.577 -08 000000075 INF: X Motor: WaitUntilStopped 60074
17-02-28 20:19:36.622 -08 000000050 INF: FPGA: Recv ZYT 
17-02-28 20:19:36.622 -08 000000066 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1483693 enc / 14.837 mm / ) = 6428701 enc / 64.287 mm
17-02-28 20:19:36.622 -08 000000066 INF: FPGA: Xmit ZARM 8062\n
17-02-28 20:19:36.638 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:36.638 -08 000000052 INF: Y Motor: Start the move command
17-02-28 20:19:36.638 -08 000000052 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:36.640 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.640 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:19:36.677 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.683 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:19:36.685 -08 000000053 INF: FPGA: Recv ZARM
17-02-28 20:19:36.685 -08 000000066 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.8913 ms
17-02-28 20:19:36.685 -08 000000066 INF: Z Motor: ArmAbsStepped took 118.007 ms
17-02-28 20:19:36.685 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:36.687 -08 000000066 INF: ===================TDI Scan Setup===================
17-02-28 20:19:36.688 -08 000000066 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:19:36.688 -08 000000066 INF: ===================TDI Scan Setup===================
17-02-28 20:19:36.690 -08 000000066 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:19:36.690 -08 000000066 INF: ===================TDI Scan Setup===================
17-02-28 20:19:36.692 -08 000000066 INF: ======================================
17-02-28 20:19:36.703 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:36.703 -08 000000052 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:19:36.703 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:36.766 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.772 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:19:36.826 -08 000000052 INF: Y Motor: Unshifted Position: 1067447
17-02-28 20:19:36.863 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.869 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:19:36.876 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:36.966 -08 000000034 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:36.966 -08 000000034 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:36.966 -08 000000034 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:36.976 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.981 -08 000000034 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:36.983 -08 000000034 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:37.002 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:37.137 -08 000000052 INF: Y Motor: Unshifted Position: 1772033
17-02-28 20:19:37.187 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:37.201 -08 000000075 INF: X Motor: Xmit PR ER\n
17-02-28 20:19:37.261 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:19:37.263 -08 000000075 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:19:37.263 -08 000000075 INF: X Motor: Moved to 17.7598 after 686 ms
17-02-28 20:19:37.263 -08 000000075 INF: ======================================
17-02-28 20:19:37.313 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:37.451 -08 000000052 INF: Y Motor: Unshifted Position: 2557884
17-02-28 20:19:37.501 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:37.578 -08 000000034 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:37.578 -08 000000034 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:37.579 -08 000000034 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:37.594 -08 000000034 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:37.596 -08 000000034 INF: ===================Camera Arm TDI===================
17-02-28 20:19:37.597 -08 000000034 INF: ======================================
17-02-28 20:19:37.598 -08 000000038 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:37.599 -08 000000038 INF: ======================================
17-02-28 20:19:37.624 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:37.762 -08 000000052 INF: Y Motor: Unshifted Position: 3336158
17-02-28 20:19:37.812 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:37.938 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:38.073 -08 000000052 INF: Y Motor: Unshifted Position: 4113729
17-02-28 20:19:38.123 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:38.249 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:38.387 -08 000000052 INF: Y Motor: Unshifted Position: 4898664
17-02-28 20:19:38.437 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:38.560 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:38.699 -08 000000052 INF: Y Motor: Unshifted Position: 5675486
17-02-28 20:19:38.749 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:38.872 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:39.010 -08 000000052 INF: Y Motor: Unshifted Position: 5948704
17-02-28 20:19:39.010 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:39.010 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:39.074 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:19:39.074 -08 000000052 INF: Y Motor: Moved to 64.4870 after 2371 ms
17-02-28 20:19:39.074 -08 000000052 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:39.136 -08 000000052 INF: Y Motor: Recv v 4096\r
17-02-28 20:19:39.136 -08 000000052 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:39.136 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:39.198 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:19:39.198 -08 000000052 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:39.198 -08 000000052 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:39.259 -08 000000052 INF: Y Motor: Recv v 402653184\r
17-02-28 20:19:39.259 -08 000000052 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:19:39.259 -08 000000052 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:39.259 -08 000000052 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:39.321 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:19:39.321 -08 000000052 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:39.321 -08 000000052 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:39.321 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:39.385 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:39.385 -08 000000052 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:39.385 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:39.447 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:39.447 -08 000000052 INF: ======================================
17-02-28 20:19:39.449 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:19:39.450 -08 000000058 INF: ======================================
17-02-28 20:19:39.451 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:39.452 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:39.452 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:19:39.452 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:19:39.509 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:39.509 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:19:39.553 -08 000000087 INF: FPGA: Recv ZFREQCL
17-02-28 20:19:39.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:19:39.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:39.554 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:39.618 -08 000000060 INF: FPGA: Recv TDIYERD 6448702
17-02-28 20:19:39.618 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448702 counts (64.487 mm)
17-02-28 20:19:39.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:39.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:39.620 -08 000000033 INF: ===================TDI FPGA Arm===================
17-02-28 20:19:39.620 -08 000000069 INF: ===================Set YMotor gains for scans===================
17-02-28 20:19:39.621 -08 000000069 INF: ======================================
17-02-28 20:19:39.621 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:39.621 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:19:39.621 -08 000000033 INF: FPGA: Xmit TDIYPOS 6337776\n
17-02-28 20:19:39.680 -08 000000053 INF: FPGA: Recv TDIYPOS
17-02-28 20:19:39.681 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:39.683 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:19:39.683 -08 000000033 INF: FPGA: Xmit TDIYARM3 139264 6428701 1 1\n
17-02-28 20:19:39.742 -08 000000060 INF: FPGA: Recv TDIYARM3
17-02-28 20:19:39.743 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:39.744 -08 000000033 INF: ===================TDI FPGA Arm===================
17-02-28 20:19:39.745 -08 000000033 INF: ======================================
17-02-28 20:19:39.746 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:39.747 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:39.747 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:39.747 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:39.748 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:39.749 -08 000000085 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:19:39.749 -08 000000058 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:19:39.749 -08 000000085 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:19:39.749 -08 000000085 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:19:39.749 -08 000000085 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:19:39.749 -08 000000058 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:19:39.749 -08 000000085 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:19:39.749 -08 000000058 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:19:39.749 -08 000000058 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:19:39.750 -08 000000058 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:19:40.117 -08 000000030 INF: FPGA: Recv EX2MV
17-02-28 20:19:40.117 -08 000000030 INF: FPGA: Recv EX1MV
17-02-28 20:19:40.117 -08 000000058 INF: Excitation Filter 1: Moved -107 steps in 368.1152 ms
17-02-28 20:19:40.117 -08 000000085 INF: Excitation Filter 2: Moved -107 steps in 368.3107 ms
17-02-28 20:19:40.117 -08 000000058 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.2646 ms
17-02-28 20:19:40.117 -08 000000085 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.4084 ms
17-02-28 20:19:40.117 -08 000000085 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.4932 ms
17-02-28 20:19:40.117 -08 000000058 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.3696 ms
17-02-28 20:19:40.118 -08 000000085 INF: ======================================
17-02-28 20:19:40.118 -08 000000058 INF: ======================================
17-02-28 20:19:40.119 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:40.120 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:40.121 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:19:40.121 -08 000000086 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:40.121 -08 000000057 INF: ===================FPGA Z Wait===================
17-02-28 20:19:40.121 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:40.121 -08 000000089 INF: Y Motor: Moving to 14.8387 mm @6.500 mm/sec, started at 64.4870 mm
17-02-28 20:19:40.122 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:40.122 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:40.122 -08 000000081 INF: ===================Camera TDI, Parallel===================
17-02-28 20:19:40.122 -08 000000086 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:19:40.122 -08 000000086 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:19:40.123 -08 000000057 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:19:40.123 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:19:40.123 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:19:40.125 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:40.125 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:40.125 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:40.125 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:40.196 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:19:40.196 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:40.196 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:40.258 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:19:40.258 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:40.275 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:40.275 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:40.275 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:40.275 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:40.320 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:19:40.320 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:40.320 -08 000000089 INF: Y Motor: Set target position to 983867 encoder counts
17-02-28 20:19:40.320 -08 000000089 INF: Y Motor: Xmit s r0xca 983867\r
17-02-28 20:19:40.384 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:19:40.384 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:19:40.384 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:40.425 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:40.425 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:40.425 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:40.425 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:40.446 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:19:40.446 -08 000000089 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:19:40.446 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:40.552 -08 000000038 INF: FPGA: Recv ZWAIT 
17-02-28 20:19:40.552 -08 000000057 INF: ======================================
17-02-28 20:19:40.569 -08 000000089 INF: Y Motor: Unshifted Position: 5887496
17-02-28 20:19:40.575 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:40.575 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:40.575 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:40.575 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:40.575 -08 000000090 INF: ===================Camera #0 Frame #4===================
17-02-28 20:19:40.575 -08 000000064 INF: ===================Camera #2 Frame #4===================
17-02-28 20:19:40.619 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:40.744 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:40.744 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:19:40.744 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:19:40.744 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:19:40.744 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:19:40.744 -08 000000090 INF: ===================Camera #0 Frame #10===================
17-02-28 20:19:40.744 -08 000000064 INF: ===================Camera #2 Frame #10===================
17-02-28 20:19:40.882 -08 000000089 INF: Y Motor: Unshifted Position: 5683828
17-02-28 20:19:40.912 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 15, frameCount = 16.
17-02-28 20:19:40.912 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 16
17-02-28 20:19:40.912 -08 000000090 INF: ===================Camera #0 Frame #16===================
17-02-28 20:19:40.922 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:19:40.922 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:19:40.922 -08 000000064 INF: ===================Camera #2 Frame #17===================
17-02-28 20:19:40.933 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.058 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.088 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:19:41.088 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:19:41.088 -08 000000090 INF: ===================Camera #0 Frame #23===================
17-02-28 20:19:41.101 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:19:41.101 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:19:41.101 -08 000000064 INF: ===================Camera #2 Frame #23===================
17-02-28 20:19:41.193 -08 000000089 INF: Y Motor: Unshifted Position: 5481469
17-02-28 20:19:41.243 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.269 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:19:41.269 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:19:41.269 -08 000000090 INF: ===================Camera #0 Frame #30===================
17-02-28 20:19:41.279 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:19:41.279 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:19:41.279 -08 000000064 INF: ===================Camera #2 Frame #30===================
17-02-28 20:19:41.369 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.443 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:19:41.443 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:19:41.443 -08 000000090 INF: ===================Camera #0 Frame #36===================
17-02-28 20:19:41.459 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:19:41.459 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:19:41.459 -08 000000064 INF: ===================Camera #2 Frame #37===================
17-02-28 20:19:41.507 -08 000000089 INF: Y Motor: Unshifted Position: 5277578
17-02-28 20:19:41.557 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.616 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:19:41.616 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:19:41.616 -08 000000090 INF: ===================Camera #0 Frame #42===================
17-02-28 20:19:41.640 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:19:41.640 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:19:41.640 -08 000000064 INF: ===================Camera #2 Frame #43===================
17-02-28 20:19:41.680 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.785 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:19:41.785 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:19:41.785 -08 000000090 INF: ===================Camera #0 Frame #49===================
17-02-28 20:19:41.810 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:19:41.810 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:19:41.810 -08 000000064 INF: ===================Camera #2 Frame #49===================
17-02-28 20:19:41.819 -08 000000089 INF: Y Motor: Unshifted Position: 5074352
17-02-28 20:19:41.869 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.967 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:19:41.967 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:19:41.967 -08 000000090 INF: ===================Camera #0 Frame #55===================
17-02-28 20:19:41.987 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:19:41.987 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:19:41.987 -08 000000064 INF: ===================Camera #2 Frame #56===================
17-02-28 20:19:41.992 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:42.130 -08 000000089 INF: Y Motor: Unshifted Position: 4872204
17-02-28 20:19:42.145 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:19:42.145 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:19:42.145 -08 000000090 INF: ===================Camera #0 Frame #62===================
17-02-28 20:19:42.161 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:19:42.161 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:19:42.161 -08 000000064 INF: ===================Camera #2 Frame #62===================
17-02-28 20:19:42.180 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:42.306 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:42.327 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:19:42.327 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:19:42.327 -08 000000090 INF: ===================Camera #0 Frame #69===================
17-02-28 20:19:42.340 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:19:42.340 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:19:42.340 -08 000000064 INF: ===================Camera #2 Frame #69===================
17-02-28 20:19:42.441 -08 000000089 INF: Y Motor: Unshifted Position: 4670052
17-02-28 20:19:42.491 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:42.508 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:19:42.508 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:19:42.508 -08 000000090 INF: ===================Camera #0 Frame #75===================
17-02-28 20:19:42.522 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:19:42.522 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:19:42.522 -08 000000064 INF: ===================Camera #2 Frame #76===================
17-02-28 20:19:42.617 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:42.682 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:19:42.682 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:19:42.682 -08 000000090 INF: ===================Camera #0 Frame #82===================
17-02-28 20:19:42.699 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:19:42.699 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:19:42.699 -08 000000064 INF: ===================Camera #2 Frame #82===================
17-02-28 20:19:42.753 -08 000000089 INF: Y Motor: Unshifted Position: 4465720
17-02-28 20:19:42.803 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:42.853 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:19:42.853 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:19:42.853 -08 000000090 INF: ===================Camera #0 Frame #88===================
17-02-28 20:19:42.868 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:19:42.868 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:19:42.868 -08 000000064 INF: ===================Camera #2 Frame #88===================
17-02-28 20:19:42.929 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.022 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:19:43.022 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:19:43.022 -08 000000090 INF: ===================Camera #0 Frame #94===================
17-02-28 20:19:43.038 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:19:43.038 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:19:43.038 -08 000000064 INF: ===================Camera #2 Frame #95===================
17-02-28 20:19:43.067 -08 000000089 INF: Y Motor: Unshifted Position: 4262708
17-02-28 20:19:43.117 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.191 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:19:43.191 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:19:43.191 -08 000000090 INF: ===================Camera #0 Frame #100===================
17-02-28 20:19:43.211 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:19:43.211 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:19:43.211 -08 000000064 INF: ===================Camera #2 Frame #101===================
17-02-28 20:19:43.240 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.359 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:19:43.359 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:19:43.359 -08 000000090 INF: ===================Camera #0 Frame #107===================
17-02-28 20:19:43.378 -08 000000089 INF: Y Motor: Unshifted Position: 4060549
17-02-28 20:19:43.380 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:19:43.380 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:19:43.380 -08 000000064 INF: ===================Camera #2 Frame #107===================
17-02-28 20:19:43.428 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.531 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:19:43.531 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:19:43.531 -08 000000090 INF: ===================Camera #0 Frame #113===================
17-02-28 20:19:43.549 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:19:43.549 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:19:43.549 -08 000000064 INF: ===================Camera #2 Frame #114===================
17-02-28 20:19:43.554 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.689 -08 000000089 INF: Y Motor: Unshifted Position: 3858186
17-02-28 20:19:43.699 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:19:43.699 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:19:43.699 -08 000000090 INF: ===================Camera #0 Frame #119===================
17-02-28 20:19:43.722 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:19:43.722 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:19:43.722 -08 000000064 INF: ===================Camera #2 Frame #120===================
17-02-28 20:19:43.739 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.866 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.868 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:19:43.868 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:19:43.868 -08 000000090 INF: ===================Camera #0 Frame #125===================
17-02-28 20:19:43.891 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:19:43.891 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:19:43.891 -08 000000064 INF: ===================Camera #2 Frame #126===================
17-02-28 20:19:44.001 -08 000000089 INF: Y Motor: Unshifted Position: 3655381
17-02-28 20:19:44.037 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:19:44.037 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:19:44.037 -08 000000090 INF: ===================Camera #0 Frame #131===================
17-02-28 20:19:44.051 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:44.060 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:19:44.060 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:19:44.060 -08 000000064 INF: ===================Camera #2 Frame #132===================
17-02-28 20:19:44.177 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:44.206 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:19:44.206 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:19:44.206 -08 000000090 INF: ===================Camera #0 Frame #138===================
17-02-28 20:19:44.229 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:19:44.229 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:19:44.229 -08 000000064 INF: ===================Camera #2 Frame #139===================
17-02-28 20:19:44.315 -08 000000089 INF: Y Motor: Unshifted Position: 3451280
17-02-28 20:19:44.365 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:44.377 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:19:44.377 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:19:44.377 -08 000000090 INF: ===================Camera #0 Frame #144===================
17-02-28 20:19:44.401 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:19:44.401 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:19:44.401 -08 000000064 INF: ===================Camera #2 Frame #145===================
17-02-28 20:19:44.488 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:44.545 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:19:44.545 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:19:44.545 -08 000000090 INF: ===================Camera #0 Frame #150===================
17-02-28 20:19:44.570 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:19:44.570 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:19:44.570 -08 000000064 INF: ===================Camera #2 Frame #151===================
17-02-28 20:19:44.626 -08 000000089 INF: Y Motor: Unshifted Position: 3248921
17-02-28 20:19:44.676 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:44.713 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:19:44.713 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:19:44.713 -08 000000090 INF: ===================Camera #0 Frame #156===================
17-02-28 20:19:44.739 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:19:44.739 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:19:44.739 -08 000000064 INF: ===================Camera #2 Frame #157===================
17-02-28 20:19:44.800 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:44.881 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:19:44.881 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:19:44.881 -08 000000090 INF: ===================Camera #0 Frame #163===================
17-02-28 20:19:44.907 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:19:44.907 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:19:44.907 -08 000000064 INF: ===================Camera #2 Frame #164===================
17-02-28 20:19:44.938 -08 000000089 INF: Y Motor: Unshifted Position: 3046122
17-02-28 20:19:44.988 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.052 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:19:45.052 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:19:45.052 -08 000000090 INF: ===================Camera #0 Frame #169===================
17-02-28 20:19:45.079 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:19:45.079 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:19:45.079 -08 000000064 INF: ===================Camera #2 Frame #170===================
17-02-28 20:19:45.114 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.220 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:19:45.220 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:19:45.220 -08 000000090 INF: ===================Camera #0 Frame #175===================
17-02-28 20:19:45.248 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:19:45.248 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:19:45.248 -08 000000064 INF: ===================Camera #2 Frame #176===================
17-02-28 20:19:45.249 -08 000000089 INF: Y Motor: Unshifted Position: 2843759
17-02-28 20:19:45.299 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.388 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:19:45.388 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:19:45.388 -08 000000090 INF: ===================Camera #0 Frame #181===================
17-02-28 20:19:45.417 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:19:45.417 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:19:45.417 -08 000000064 INF: ===================Camera #2 Frame #182===================
17-02-28 20:19:45.425 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.556 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:19:45.556 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:19:45.556 -08 000000090 INF: ===================Camera #0 Frame #187===================
17-02-28 20:19:45.563 -08 000000089 INF: Y Motor: Unshifted Position: 2639655
17-02-28 20:19:45.586 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:19:45.586 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:19:45.586 -08 000000064 INF: ===================Camera #2 Frame #189===================
17-02-28 20:19:45.613 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.724 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:19:45.724 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:19:45.724 -08 000000090 INF: ===================Camera #0 Frame #194===================
17-02-28 20:19:45.736 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.758 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:19:45.758 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:19:45.758 -08 000000064 INF: ===================Camera #2 Frame #195===================
17-02-28 20:19:45.875 -08 000000089 INF: Y Motor: Unshifted Position: 2436651
17-02-28 20:19:45.895 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:19:45.895 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:19:45.895 -08 000000090 INF: ===================Camera #0 Frame #200===================
17-02-28 20:19:45.925 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.927 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:19:45.927 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:19:45.927 -08 000000064 INF: ===================Camera #2 Frame #201===================
17-02-28 20:19:46.048 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:46.063 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:19:46.063 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:19:46.063 -08 000000090 INF: ===================Camera #0 Frame #206===================
17-02-28 20:19:46.096 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:19:46.096 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:19:46.096 -08 000000064 INF: ===================Camera #2 Frame #207===================
17-02-28 20:19:46.186 -08 000000089 INF: Y Motor: Unshifted Position: 2234500
17-02-28 20:19:46.231 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:19:46.231 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:19:46.231 -08 000000090 INF: ===================Camera #0 Frame #212===================
17-02-28 20:19:46.236 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:46.266 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:19:46.266 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:19:46.266 -08 000000064 INF: ===================Camera #2 Frame #214===================
17-02-28 20:19:46.363 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:46.400 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:19:46.400 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:19:46.400 -08 000000090 INF: ===================Camera #0 Frame #218===================
17-02-28 20:19:46.438 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:19:46.438 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:19:46.438 -08 000000064 INF: ===================Camera #2 Frame #220===================
17-02-28 20:19:46.498 -08 000000089 INF: Y Motor: Unshifted Position: 2032133
17-02-28 20:19:46.548 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:46.568 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:19:46.568 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:19:46.568 -08 000000090 INF: ===================Camera #0 Frame #225===================
17-02-28 20:19:46.607 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:19:46.607 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:19:46.607 -08 000000064 INF: ===================Camera #2 Frame #226===================
17-02-28 20:19:46.674 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:46.739 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:19:46.739 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:19:46.739 -08 000000090 INF: ===================Camera #0 Frame #231===================
17-02-28 20:19:46.776 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:19:46.776 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:19:46.776 -08 000000064 INF: ===================Camera #2 Frame #232===================
17-02-28 20:19:46.810 -08 000000089 INF: Y Motor: Unshifted Position: 1827805
17-02-28 20:19:46.860 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:46.907 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:19:46.907 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:19:46.907 -08 000000090 INF: ===================Camera #0 Frame #237===================
17-02-28 20:19:46.945 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:19:46.945 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:19:46.945 -08 000000064 INF: ===================Camera #2 Frame #239===================
17-02-28 20:19:46.986 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.075 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:19:47.075 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:19:47.075 -08 000000090 INF: ===================Camera #0 Frame #243===================
17-02-28 20:19:47.118 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:19:47.118 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:19:47.118 -08 000000064 INF: ===================Camera #2 Frame #245===================
17-02-28 20:19:47.124 -08 000000089 INF: Y Motor: Unshifted Position: 1625013
17-02-28 20:19:47.174 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.243 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:19:47.243 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:19:47.243 -08 000000090 INF: ===================Camera #0 Frame #249===================
17-02-28 20:19:47.289 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:19:47.289 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:19:47.289 -08 000000064 INF: ===================Camera #2 Frame #251===================
17-02-28 20:19:47.297 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.413 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:19:47.413 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:19:47.413 -08 000000090 INF: ===================Camera #0 Frame #256===================
17-02-28 20:19:47.436 -08 000000089 INF: Y Motor: Unshifted Position: 1421990
17-02-28 20:19:47.460 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:19:47.460 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:19:47.460 -08 000000064 INF: ===================Camera #2 Frame #257===================
17-02-28 20:19:47.486 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.587 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:19:47.587 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:19:47.587 -08 000000090 INF: ===================Camera #0 Frame #262===================
17-02-28 20:19:47.609 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.631 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:19:47.631 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:19:47.631 -08 000000064 INF: ===================Camera #2 Frame #264===================
17-02-28 20:19:47.747 -08 000000089 INF: Y Motor: Unshifted Position: 1219838
17-02-28 20:19:47.757 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:19:47.757 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:19:47.757 -08 000000090 INF: ===================Camera #0 Frame #268===================
17-02-28 20:19:47.797 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.805 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:19:47.805 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:19:47.805 -08 000000064 INF: ===================Camera #2 Frame #270===================
17-02-28 20:19:47.855 -08 000000045 INF: FPGA: Recv TDIYWAIT
17-02-28 20:19:47.855 -08 000000086 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:47.857 -08 000000086 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:19:47.858 -08 000000108 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:19:47.858 -08 000000025 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:19:47.858 -08 000000108 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:19:47.858 -08 000000108 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:19:47.858 -08 000000108 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:19:47.858 -08 000000025 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:19:47.858 -08 000000025 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:19:47.858 -08 000000025 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:19:47.858 -08 000000108 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:19:47.859 -08 000000025 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:19:47.921 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.927 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:47.927 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:47.927 -08 000000090 INF: ===================Camera #0 Frame #272===================
17-02-28 20:19:47.940 -08 000000090 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:47.941 -08 000000090 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:48.059 -08 000000089 INF: Y Motor: Unshifted Position: 1016820
17-02-28 20:19:48.071 -08 000000090 INF: Camera #0 ReleaseBuffer
17-02-28 20:19:48.071 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:48.071 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:48.071 -08 000000064 INF: ===================Camera #2 Frame #272===================
17-02-28 20:19:48.071 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:19:48.077 -08 000000064 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:48.078 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:48.101 -08 000000090 INF: ======================================
17-02-28 20:19:48.109 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:48.231 -08 000000066 INF: FPGA: Recv EX1MV
17-02-28 20:19:48.231 -08 000000066 INF: FPGA: Recv EX2MV
17-02-28 20:19:48.232 -08 000000025 INF: Excitation Filter 2: Moved 107 steps in 373.5421 ms
17-02-28 20:19:48.232 -08 000000108 INF: Excitation Filter 1: Moved 107 steps in 373.7113 ms
17-02-28 20:19:48.232 -08 000000025 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.69 ms
17-02-28 20:19:48.232 -08 000000025 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.8056 ms
17-02-28 20:19:48.232 -08 000000108 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.8428 ms
17-02-28 20:19:48.232 -08 000000108 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 374.0519 ms
17-02-28 20:19:48.232 -08 000000025 INF: ======================================
17-02-28 20:19:48.232 -08 000000108 INF: ======================================
17-02-28 20:19:48.233 -08 000000086 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:48.235 -08 000000086 INF: ======================================
17-02-28 20:19:48.245 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:19:48.245 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:19:48.246 -08 000000089 INF: Y Motor: Unshifted Position: 983865
17-02-28 20:19:48.246 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:48.246 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:48.279 -08 000000064 INF: ======================================
17-02-28 20:19:48.280 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:19:48.281 -08 000000081 INF: ======================================
17-02-28 20:19:48.308 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:19:48.308 -08 000000089 INF: Y Motor: Moved to 14.8387 after 7861 ms
17-02-28 20:19:48.308 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:48.370 -08 000000089 INF: Y Motor: Recv v 4097\r
17-02-28 20:19:48.370 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:48.370 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:48.434 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:19:48.434 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:48.434 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:48.496 -08 000000089 INF: Y Motor: Recv v 134217728\r
17-02-28 20:19:48.496 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:19:48.496 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:48.496 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:48.557 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:19:48.557 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:48.557 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:48.557 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:48.619 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:19:48.619 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:48.619 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:48.684 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:19:48.684 -08 000000089 INF: ======================================
17-02-28 20:19:48.685 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:48.686 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:48.687 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:48.687 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:19:48.731 -08 000000025 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:19:48.731 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:48.790 -08 000000052 INF: FPGA: Recv TDIYERD 1483869
17-02-28 20:19:48.790 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:19:48.853 -08 000000053 INF: FPGA: Recv ZADCR 17913
17-02-28 20:19:48.853 -08 000000018 INF: At scan end Y pos = 14.839 and Z pos = -0.069. Y moved -48.539 mm
17-02-28 20:19:48.853 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:19:48.915 -08 000000060 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:19:48.915 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:19:48.915 -08 000000018 INF: TDIScan finished after 12621.9715 ms
17-02-28 20:19:48.915 -08 000000018 INF: Image[0]: Y should trigger at 63.378 mm, 2nd row was at 64.287 mm (error = 0.909 mm)
17-02-28 20:19:48.915 -08 000000018 INF: Image[2]: Y should trigger at 63.378 mm, 2nd row was at 64.287 mm (error = 0.909 mm)
17-02-28 20:19:48.917 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:48.952 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.840 um
17-02-28 20:19:48.952 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:48.953 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:19:48.978 -08 000000025 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:19:48.978 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:48.979 -08 000000050 INF: ===================Dither Clean Up Command===================
17-02-28 20:19:48.979 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:19:48.979 -08 000000038 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:19:48.979 -08 000000064 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:19:48.979 -08 000000038 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:48.979 -08 000000038 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:48.979 -08 000000064 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:19:48.979 -08 000000064 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:19:48.980 -08 000000086 INF: ======================================
17-02-28 20:19:48.980 -08 000000010 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:48.980 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:48.981 -08 000000010 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:19:48.983 -08 000000058 INF: ===================LFT:Extracting coords===================
17-02-28 20:19:49.009 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:49.009 -08 000000058 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:19:49.010 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.010 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.010 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.011 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.011 -08 000000108 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:49.011 -08 000000075 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:49.011 -08 000000089 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:49.012 -08 000000077 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:49.040 -08 000000085 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:49.040 -08 000000085 INF: FPGA: Recv ZSEL 
17-02-28 20:19:49.040 -08 000000010 INF: FPGA: Xmit ZDACW 18548\n
17-02-28 20:19:49.041 -08 000000064 INF: ======================================
17-02-28 20:19:49.057 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:19:49.057 -08 000000038 INF: ======================================
17-02-28 20:19:49.085 -08 000000108 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:49.085 -08 000000075 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:49.085 -08 000000089 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:49.086 -08 000000077 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:49.102 -08 000000039 INF: FPGA: Recv ZDACW 
17-02-28 20:19:49.103 -08 000000010 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:19:49.103 -08 000000010 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:19:49.163 -08 000000052 INF: FPGA: Recv TDIBB
17-02-28 20:19:49.163 -08 000000010 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:49.164 -08 000000010 INF: ======================================
17-02-28 20:19:49.236 -08 000000108 INF: LFT found best fwhm score 2.000005 in 151 ms
17-02-28 20:19:49.236 -08 000000108 INF: LFT found good score at index 469 with fwhm value 2.000005. Next cycle, cycle 4 starting Z position for bottom surface is at -0.051 mm FC:A, C:3,L:5,B
17-02-28 20:19:49.236 -08 000000075 INF: LFT found best fwhm score 2.001784 in 151 ms
17-02-28 20:19:49.236 -08 000000075 INF: LFT found good score at index 1773 with fwhm value 2.001784. Next cycle, cycle 4 starting Z position for bottom surface is at -0.051 mm FC:A, C:3,L:5,B
17-02-28 20:19:49.236 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.236 -08 000000089 INF: LFT found best fwhm score 2.000092 in 151 ms
17-02-28 20:19:49.236 -08 000000089 INF: LFT found good score at index 7921 with fwhm value 2.000092. Next cycle, cycle 4 starting Z position for bottom surface is at -0.051 mm FC:A, C:3,L:5,B
17-02-28 20:19:49.237 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.237 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.237 -08 000000108 INF: ======================================
17-02-28 20:19:49.237 -08 000000077 INF: LFT found best fwhm score 2.003173 in 151 ms
17-02-28 20:19:49.237 -08 000000077 INF: LFT found good score at index 1097 with fwhm value 2.003173. Next cycle, cycle 4 starting Z position for bottom surface is at -0.051 mm FC:A, C:3,L:5,B
17-02-28 20:19:49.237 -08 000000075 INF: ======================================
17-02-28 20:19:49.237 -08 000000089 INF: ======================================
17-02-28 20:19:49.237 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.237 -08 000000077 INF: ======================================
17-02-28 20:19:49.238 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:49.239 -08 000000058 INF: LFT weighted average best Z for bottom surface is at -0.051mm FC:A, C:3,L:5,B
17-02-28 20:19:49.239 -08 000000058 INF: ======================================
17-02-28 20:19:49.240 -08 000000050 INF: ======================================
17-02-28 20:19:49.241 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:49.242 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:19:49.242 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:49.242 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:19:49.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:49.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:19:49.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:49.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:19:49.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:49.244 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494===================
17-02-28 20:19:49.244 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494===================
17-02-28 20:19:49.244 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:19:49.245 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494===================
17-02-28 20:19:49.245 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:19:49.245 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:19:49.267 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:19:49.268 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:49.268 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:49.268 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:49.268 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:19:49.269 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:49.269 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:19:49.285 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.286 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.287 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:49.287 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:49.310 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":5,"Tile":2201,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF225","HCSMMF279","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.347 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:49.349 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.349 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:19:49.350 -08 000000018 INF: Lane 6, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:19:49.351 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.353 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.354 -08 000000060 INF: ===================Move Tilt Motor 1===================
17-02-28 20:19:49.354 -08 000000060 INF: ======================================
17-02-28 20:19:49.354 -08 000000072 INF: ===================Move Tilt Motor 2===================
17-02-28 20:19:49.354 -08 000000105 INF: ===================Move Tilt Motor 3===================
17-02-28 20:19:49.359 -08 000000072 INF: ======================================
17-02-28 20:19:49.360 -08 000000105 INF: ======================================
17-02-28 20:19:49.362 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.362 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.393 -08 000000018 INF: Transformed XStagePosition from 19.96393 mm to 19.9639301300049 mm.
17-02-28 20:19:49.396 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":5,"Tile":2202,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF221","HCSMMF256","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.406 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:19:49.406 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:19:49.406 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:19:49.407 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:49.408 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:49.414 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:19:49.415 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:19:49.415 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:19:49.429 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":5,"Tile":2208,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF214","HCSMMF269","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.431 -08 000000038 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:49.516 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":5,"Tile":2210,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF194","HCSMMF220","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.517 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:49.517 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:19:49.517 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0708 mm
17-02-28 20:19:49.518 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:19:49.518 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":5,"Tile":2207,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF216","HCSMMF204","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.520 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":5,"Tile":2205,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF242","HCSMMF263","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.530 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":5,"Tile":2203,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF208","HCSMMF277","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.540 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":5,"Tile":2214,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF219","HCSMMF176","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.542 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":5,"Tile":2206,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF200","HCSMMF245","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.543 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":5,"Tile":2215,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF235","HCSMMF270","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.545 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":5,"Tile":2213,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF250","HCSMMF177","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.546 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":5,"Tile":2209,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF268","HCSMMF228","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.547 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":5,"Tile":2204,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF271","HCSMMF251","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.548 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":5,"Tile":2211,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF285","HCSMMF195","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.549 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":5,"Tile":2216,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF212","HCSMMF227","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.549 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":5,"Tile":2218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF239","HCSMMF237","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.551 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":5,"Tile":2212,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF262","HCSMMF286","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.551 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":5,"Tile":2219,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF276","HCSMMF284","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.552 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":5,"Tile":2222,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF259","HCSMMF272","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.553 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":5,"Tile":2227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF248","HCSMMF203","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.554 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":5,"Tile":2225,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF218","HCSMMF266","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.554 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":5,"Tile":2228,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF255","HCSMMF186","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.555 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":5,"Tile":2217,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF287","HCSMMF229","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.556 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":5,"Tile":2224,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF201","HCSMMF254","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.557 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":5,"Tile":2221,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF184","HCSMMF240","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.558 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":5,"Tile":2226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF264","HCSMMF179","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.559 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":5,"Tile":2223,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF178","HCSMMF213","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.560 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":5,"Tile":2220,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF244","HCSMMF206","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.564 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:49.569 -08 000000035 INF: FPGA: Recv ZTRG 
17-02-28 20:19:49.569 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:19:49.570 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:19:49.631 -08 000000090 INF: FPGA: Recv ZYT 
17-02-28 20:19:49.631 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:19:49.631 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:19:49.664 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:49.664 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:19:49.697 -08 000000075 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:19:49.697 -08 000000075 INF: FPGA: Recv ZMV 
17-02-28 20:19:49.697 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:19:49.697 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 65.9752 ms
17-02-28 20:19:49.697 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:19:49.703 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:49.708 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:19:49.756 -08 000000010 INF: FPGA: Recv ZDACR 60292
17-02-28 20:19:49.756 -08 000000018 INF: Z Motor: MoveAndTrigger took 239.1032 ms w/comms
17-02-28 20:19:49.756 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:19:49.756 -08 000000018 INF: Z Motor: MoveAbsStepped took 239.2679 ms
17-02-28 20:19:49.757 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:49.757 -08 000000018 INF: Transformed XStagePosition from 19.96393 mm to 19.9639301300049 mm.
17-02-28 20:19:49.766 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:19:49.766 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:49.766 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:49.766 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:19:49.766 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:19:49.793 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:49.799 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:19:49.821 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:49.842 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:49.843 -08 000000018 INF: Transformed XStagePosition from 19.96393 mm to 19.9639301300049 mm.
17-02-28 20:19:49.851 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:19:49.851 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:49.851 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:49.853 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:49.854 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:19:49.854 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:49.854 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = F_1
17-02-28 20:19:49.854 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:49.855 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:49.855 -08 000000039 INF: ===================MoveEmissionFilters===================
17-02-28 20:19:49.856 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:19:49.856 -08 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:49.856 -08 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:49.856 -08 000000030 INF: ===================Move X,Y, Parallel===================
17-02-28 20:19:49.857 -08 000000057 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:49.857 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:49.857 -08 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:49.857 -08 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:49.857 -08 000000069 INF: ===================Move X Motor without settling===================
17-02-28 20:19:49.857 -08 000000077 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:49.858 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:49.858 -08 000000069 INF: X Motor: Xmit PR VM\n
17-02-28 20:19:49.858 -08 000000057 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:49.858 -08 000000058 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:19:49.858 -08 000000053 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:19:49.858 -08 000000035 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:19:49.858 -08 000000051 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:19:49.858 -08 000000082 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:19:49.858 -08 000000060 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:19:49.859 -08 000000058 INF: ======================================
17-02-28 20:19:49.859 -08 000000034 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:19:49.859 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:19:49.859 -08 000000082 INF: ======================================
17-02-28 20:19:49.859 -08 000000087 INF: ======================================
17-02-28 20:19:49.859 -08 000000035 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:19:49.859 -08 000000034 INF: ======================================
17-02-28 20:19:49.860 -08 000000035 INF: ======================================
17-02-28 20:19:49.860 -08 000000060 INF: ======================================
17-02-28 20:19:49.860 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:49.860 -08 000000077 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8387 mm
17-02-28 20:19:49.861 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:49.861 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:49.861 -08 000000057 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:49.861 -08 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:49.861 -08 000000053 INF: ======================================
17-02-28 20:19:49.862 -08 000000051 INF: ======================================
17-02-28 20:19:49.862 -08 000000010 INF: ======================================
17-02-28 20:19:49.862 -08 000000057 INF: ======================================
17-02-28 20:19:49.862 -08 000000025 INF: ======================================
17-02-28 20:19:49.863 -08 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:49.864 -08 000000090 INF: ======================================
17-02-28 20:19:49.865 -08 000000039 INF: ======================================
17-02-28 20:19:49.891 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:49.897 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:19:49.945 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:49.945 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:49.945 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:49.945 -08 000000069 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:19:49.945 -08 000000069 INF: X Motor: Xmit PR VI\n
17-02-28 20:19:50.000 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:50.011 -08 000000069 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:19:50.011 -08 000000069 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:19:50.011 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:50.011 -08 000000069 INF: X Motor: Moving to 19.9639 mm @15.000 mm/sec, started at 17.7598 mm
17-02-28 20:19:50.011 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:50.011 -08 000000069 INF: X Motor: Xmit MA -15989\n
17-02-28 20:19:50.072 -08 000000069 INF: X Motor: Recv MA -15989\r\n>
17-02-28 20:19:50.072 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:19:50.072 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:50.072 -08 000000069 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:19:50.072 -08 000000077 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:19:50.072 -08 000000077 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:19:50.135 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:50.135 -08 000000077 INF: Y Motor: Start the move command
17-02-28 20:19:50.135 -08 000000077 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:50.197 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:50.197 -08 000000077 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:19:50.197 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:50.281 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:19:50.321 -08 000000077 INF: Y Motor: Unshifted Position: 1066648
17-02-28 20:19:50.371 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:50.495 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:50.635 -08 000000077 INF: Y Motor: Unshifted Position: 1771374
17-02-28 20:19:50.685 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:50.694 -08 000000069 INF: X Motor: Xmit PR ER\n
17-02-28 20:19:50.759 -08 000000069 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:19:50.759 -08 000000069 INF: X Motor: Moved to 19.9644 after 687 ms
17-02-28 20:19:50.760 -08 000000069 INF: ======================================
17-02-28 20:19:50.809 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:50.947 -08 000000077 INF: Y Motor: Unshifted Position: 2546380
17-02-28 20:19:50.997 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:51.121 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:51.257 -08 000000077 INF: Y Motor: Unshifted Position: 3351327
17-02-28 20:19:51.307 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:51.431 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:51.571 -08 000000077 INF: Y Motor: Unshifted Position: 4107231
17-02-28 20:19:51.621 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:51.747 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:51.882 -08 000000077 INF: Y Motor: Unshifted Position: 4892998
17-02-28 20:19:51.932 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:52.055 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:52.195 -08 000000077 INF: Y Motor: Unshifted Position: 5666957
17-02-28 20:19:52.245 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:52.368 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:52.505 -08 000000077 INF: Y Motor: Unshifted Position: 5947055
17-02-28 20:19:52.505 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:52.505 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:52.567 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:19:52.567 -08 000000077 INF: Y Motor: Moved to 64.4706 after 2370 ms
17-02-28 20:19:52.567 -08 000000077 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:52.629 -08 000000077 INF: Y Motor: Recv v 4096\r
17-02-28 20:19:52.629 -08 000000077 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:52.629 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:52.691 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:19:52.691 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:52.691 -08 000000077 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:52.753 -08 000000077 INF: Y Motor: Recv v 402653184\r
17-02-28 20:19:52.753 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:19:52.753 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:52.753 -08 000000077 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:52.819 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:19:52.819 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:52.819 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:52.819 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:52.880 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:52.880 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:52.880 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:52.942 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:52.942 -08 000000077 INF: ======================================
17-02-28 20:19:52.944 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:19:52.945 -08 000000030 INF: ======================================
17-02-28 20:19:52.946 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:52.948 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:52.948 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:19:52.948 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:19:53.004 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:53.004 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:19:53.065 -08 000000086 INF: FPGA: Recv ZFREQCL
17-02-28 20:19:53.067 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:19:53.067 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:53.067 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:53.127 -08 000000082 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:19:53.127 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:19:53.128 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:53.128 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:53.129 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:53.129 -08 000000064 INF: ===================Set YMotor gains for scans===================
17-02-28 20:19:53.129 -08 000000064 INF: ======================================
17-02-28 20:19:53.130 -08 000000086 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:19:53.130 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:53.131 -08 000000086 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:19:53.132 -08 000000086 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:19:53.132 -08 000000086 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:19:53.188 -08 000000081 INF: FPGA: Recv TDIYPOS
17-02-28 20:19:53.189 -08 000000086 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:19:53.190 -08 000000086 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:19:53.191 -08 000000086 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:19:53.250 -08 000000050 INF: FPGA: Recv TDIYARM2
17-02-28 20:19:53.250 -08 000000086 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:19:53.252 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:53.253 -08 000000086 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:19:53.253 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:53.255 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:19:53.256 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:19:53.256 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:53.628 -08 000000086 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:19:53.628 -08 000000086 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:19:53.629 -08 000000086 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:53.644 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:19:53.646 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:54.025 -08 000000086 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:19:54.025 -08 000000086 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:19:54.025 -08 000000086 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:54.040 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:19:54.042 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:19:54.044 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:54.046 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:54.047 -08 000000086 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:19:54.048 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:54.051 -08 000000086 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:19:54.051 -08 000000086 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:19:54.051 -08 000000086 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:19:54.051 -08 000000086 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:19:54.065 -08 000000073 INF: FPGA: Recv ZYT 
17-02-28 20:19:54.065 -08 000000086 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:19:54.065 -08 000000086 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:19:54.124 -08 000000077 INF: FPGA: Recv ZARM
17-02-28 20:19:54.124 -08 000000086 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.0257 ms
17-02-28 20:19:54.124 -08 000000086 INF: Z Motor: ArmAbsStepped took 72.8836 ms
17-02-28 20:19:54.124 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:54.126 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:54.127 -08 000000086 INF: ======================================
17-02-28 20:19:54.128 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:54.129 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:54.129 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:54.130 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:54.130 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:54.131 -08 000000082 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:19:54.131 -08 000000082 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:19:54.131 -08 000000082 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:19:54.131 -08 000000082 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:19:54.131 -08 000000082 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:19:54.132 -08 000000047 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:19:54.132 -08 000000047 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:19:54.132 -08 000000047 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:19:54.132 -08 000000047 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:19:54.133 -08 000000047 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:19:54.499 -08 000000066 INF: FPGA: Recv EX1MV
17-02-28 20:19:54.499 -08 000000066 INF: FPGA: Recv EX2MV
17-02-28 20:19:54.499 -08 000000047 INF: Excitation Filter 2: Moved -107 steps in 367.1393 ms
17-02-28 20:19:54.499 -08 000000047 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.2911 ms
17-02-28 20:19:54.499 -08 000000082 INF: Excitation Filter 1: Moved -107 steps in 367.6662 ms
17-02-28 20:19:54.499 -08 000000082 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.8229 ms
17-02-28 20:19:54.499 -08 000000047 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.4013 ms
17-02-28 20:19:54.499 -08 000000082 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.9031 ms
17-02-28 20:19:54.500 -08 000000047 INF: ======================================
17-02-28 20:19:54.500 -08 000000082 INF: ======================================
17-02-28 20:19:54.501 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:54.502 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:54.503 -08 000000086 INF: ===================Serial===================
17-02-28 20:19:54.503 -08 000000069 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:54.504 -08 000000069 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:19:54.504 -08 000000090 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:54.504 -08 000000108 INF: ===================Camera TDI===================
17-02-28 20:19:54.504 -08 000000069 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:54.504 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:54.504 -08 000000086 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:19:54.504 -08 000000086 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:19:54.505 -08 000000090 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:19:54.505 -08 000000090 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:19:54.505 -08 000000108 INF: ===================Camera TDI, Parallel===================
17-02-28 20:19:54.506 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:19:54.507 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:19:54.507 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.507 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.508 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.508 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.563 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:54.563 -08 000000069 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:54.563 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:54.625 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:54.625 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:54.657 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.657 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.658 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.658 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.691 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:54.691 -08 000000069 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:54.691 -08 000000069 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:19:54.691 -08 000000069 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:19:54.750 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:54.750 -08 000000069 INF: Y Motor: Start the move command
17-02-28 20:19:54.750 -08 000000069 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:54.807 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.807 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.808 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.808 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.812 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:54.812 -08 000000069 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:19:54.812 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:54.937 -08 000000069 INF: Y Motor: Unshifted Position: 5928587
17-02-28 20:19:54.957 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.957 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.958 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.958 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.987 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:55.107 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:19:55.107 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:19:55.107 -08 000000010 INF: ===================Camera #0 Frame #1===================
17-02-28 20:19:55.108 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:19:55.108 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:19:55.108 -08 000000075 INF: ===================Camera #2 Frame #1===================
17-02-28 20:19:55.114 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:55.251 -08 000000069 INF: Y Motor: Unshifted Position: 5881775
17-02-28 20:19:55.262 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:19:55.262 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:19:55.262 -08 000000010 INF: ===================Camera #0 Frame #3===================
17-02-28 20:19:55.263 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:19:55.263 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:19:55.263 -08 000000075 INF: ===================Camera #2 Frame #3===================
17-02-28 20:19:55.301 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:55.421 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:55.421 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:55.421 -08 000000010 INF: ===================Camera #0 Frame #4===================
17-02-28 20:19:55.422 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:55.422 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:55.422 -08 000000075 INF: ===================Camera #2 Frame #4===================
17-02-28 20:19:55.425 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:55.561 -08 000000069 INF: Y Motor: Unshifted Position: 5835229
17-02-28 20:19:55.576 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:19:55.576 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:55.576 -08 000000010 INF: ===================Camera #0 Frame #5===================
17-02-28 20:19:55.577 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:19:55.577 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:55.577 -08 000000075 INF: ===================Camera #2 Frame #5===================
17-02-28 20:19:55.611 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:55.625 -08 000000036 INF: FPGA: Recv ZWAIT 
17-02-28 20:19:55.625 -08 000000036 INF: FPGA: Recv TDIYWAIT
17-02-28 20:19:55.625 -08 000000090 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:55.626 -08 000000086 INF: ===================Serial===================
17-02-28 20:19:55.627 -08 000000090 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:19:55.628 -08 000000050 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:19:55.628 -08 000000034 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:19:55.628 -08 000000050 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:19:55.628 -08 000000086 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:19:55.628 -08 000000034 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:19:55.628 -08 000000034 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:19:55.628 -08 000000034 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:19:55.629 -08 000000034 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:19:55.629 -08 000000050 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:19:55.629 -08 000000050 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:19:55.629 -08 000000086 INF: ===================Serial===================
17-02-28 20:19:55.631 -08 000000086 INF: ======================================
17-02-28 20:19:55.635 -08 000000050 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:19:55.730 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:19:55.730 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:19:55.730 -08 000000010 INF: ===================Camera #0 Frame #6===================
17-02-28 20:19:55.731 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:19:55.731 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:19:55.731 -08 000000075 INF: ===================Camera #2 Frame #6===================
17-02-28 20:19:55.733 -08 000000010 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:19:55.734 -08 000000010 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:55.734 -08 000000075 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:19:55.735 -08 000000075 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:55.740 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:55.759 -08 000000010 INF: Camera #0 ReleaseBuffer
17-02-28 20:19:55.759 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:19:55.760 -08 000000010 INF: ======================================
17-02-28 20:19:55.784 -08 000000075 INF: Camera #2 ReleaseBuffer
17-02-28 20:19:55.784 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:19:55.785 -08 000000075 INF: ======================================
17-02-28 20:19:55.787 -08 000000108 INF: ===================Camera TDI===================
17-02-28 20:19:55.788 -08 000000108 INF: ======================================
17-02-28 20:19:55.875 -08 000000069 INF: Y Motor: Unshifted Position: 5790758
17-02-28 20:19:55.925 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:56.058 -08 000000058 INF: FPGA: Recv EX2MV
17-02-28 20:19:56.058 -08 000000058 INF: FPGA: Recv EX1MV
17-02-28 20:19:56.058 -08 000000034 INF: Excitation Filter 2: Moved 107 steps in 429.4201 ms
17-02-28 20:19:56.058 -08 000000050 INF: Excitation Filter 1: Moved 107 steps in 429.2714 ms
17-02-28 20:19:56.058 -08 000000050 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 429.79 ms
17-02-28 20:19:56.058 -08 000000050 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 429.8709 ms
17-02-28 20:19:56.058 -08 000000034 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 429.582 ms
17-02-28 20:19:56.058 -08 000000034 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 429.9683 ms
17-02-28 20:19:56.059 -08 000000050 INF: ======================================
17-02-28 20:19:56.059 -08 000000034 INF: ======================================
17-02-28 20:19:56.060 -08 000000069 INF: Y Motor: Unshifted Position: 5790744
17-02-28 20:19:56.060 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:56.060 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:56.060 -08 000000090 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:56.061 -08 000000090 INF: ======================================
17-02-28 20:19:56.125 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:56.125 -08 000000069 INF: Y Motor: Moved to 62.9074 after 1313 ms
17-02-28 20:19:56.125 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:56.187 -08 000000069 INF: Y Motor: Recv v 4097\r
17-02-28 20:19:56.187 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:56.187 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:56.249 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:56.249 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:56.249 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:56.314 -08 000000069 INF: Y Motor: Recv v 134217728\r
17-02-28 20:19:56.314 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:19:56.314 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:56.314 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:56.376 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:56.376 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:56.376 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:56.376 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:56.436 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:56.436 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:56.436 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:56.498 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:56.498 -08 000000069 INF: ======================================
17-02-28 20:19:56.499 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:56.500 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:56.501 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.502 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:19:56.559 -08 000000066 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:19:56.559 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:56.608 -08 000000025 INF: RunCopyService queue size at 2/28/2017 8:19:56 PM is 4
17-02-28 20:19:56.625 -08 000000078 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:19:56.626 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:19:56.685 -08 000000087 INF: FPGA: Recv ZADCR 2425
17-02-28 20:19:56.685 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:19:56.685 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:19:56.747 -08 000000057 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:19:56.747 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:19:56.747 -08 000000018 INF: TDIScan finished after 6903.8583 ms
17-02-28 20:19:56.747 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:19:56.747 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:19:56.748 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:19:56.810 -08 000000073 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:19:56.811 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.811 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.812 -08 000000087 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:19:56.812 -08 000000078 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:19:56.812 -08 000000077 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:19:56.813 -08 000000087 INF: ======================================
17-02-28 20:19:56.813 -08 000000077 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:56.813 -08 000000078 INF: ======================================
17-02-28 20:19:56.813 -08 000000077 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:56.873 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:56.873 -08 000000077 INF: ======================================
17-02-28 20:19:56.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.875 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.876 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:19:56.920 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.920 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:19:56.969 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.969 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:19:57.000 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:57.000 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:19:57.049 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:57.050 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:57.050 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:57.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:19:57.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:57.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:19:57.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:19:57.686 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:19:57.709 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0523143805926639Best Z position at top surface = -0.124095667824279Best Z position at top surface + compensator offset = -0.101395667824279 C:3,L:6,B
17-02-28 20:19:57.711 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.124095667824279
17-02-28 20:19:57.711 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.74112
17-02-28 20:19:57.711 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0523143805926639
17-02-28 20:19:57.711 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.39543
17-02-28 20:19:57.711 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0523143805926639.
17-02-28 20:19:57.711 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:57.846 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:19:57.846 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:19:57.869 -08 000000060 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:57.869 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:57.871 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.871 -08 000000018 INF: Lane 6, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:19:57.871 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.872 -08 000000072 INF: ===================Move Tilt Motor 1===================
17-02-28 20:19:57.873 -08 000000036 INF: ===================Move Tilt Motor 3===================
17-02-28 20:19:57.873 -08 000000058 INF: ===================Move Tilt Motor 2===================
17-02-28 20:19:57.873 -08 000000072 INF: ======================================
17-02-28 20:19:57.873 -08 000000058 INF: ======================================
17-02-28 20:19:57.873 -08 000000036 INF: ======================================
17-02-28 20:19:57.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.875 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.875 -08 000000018 INF: ETF Best Z: -0.05231438 mm (13714 DAC)
17-02-28 20:19:57.875 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.876 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.876 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:19:57.877 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.877 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.883 -08 000000018 INF: Swath 1 position calculated to be: {X=19.39233, Y=39.70494} from estimated center X= 19.887, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:19:57.883 -08 000000018 INF: Swath 2 position calculated to be: {X=20.50033, Y=39.70494} from estimated center X= 19.887, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:19:58.278 -08 000000018 INF: Swath 0: Converted transform from (98.76729, -20.16876) pixels to (0.034155, -0.0069) mm.
17-02-28 20:19:58.284 -08 000000018 INF: Swath 1: Converted transform from (73.66492, -15.52068) pixels to (0.02553, -0.00552) mm.
17-02-28 20:19:58.285 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494===================
17-02-28 20:19:58.286 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494===================
17-02-28 20:19:58.286 -08 000000018 INF: Transformed XStagePosition from 19.39233 mm to 19.4264889843762 mm.
17-02-28 20:19:58.298 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4880457398258 mm.
17-02-28 20:19:58.298 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2880457398258 mm.
17-02-28 20:19:58.298 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3787957398258 mm.
17-02-28 20:19:58.301 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:58.301 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:19:58.301 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:58.301 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = F_1
17-02-28 20:19:58.307 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:58.307 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:58.308 -08 000000052 INF: ===================Move X,Y===================
17-02-28 20:19:58.308 -08 000000066 INF: ===================MoveEmissionFilters===================
17-02-28 20:19:58.308 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:58.309 -08 000000052 INF: ===================Move X,Y, Parallel===================
17-02-28 20:19:58.309 -08 000000034 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:58.309 -08 000000072 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:58.309 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:19:58.309 -08 000000058 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:58.309 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:58.310 -08 000000051 INF: ===================Move X Motor without settling===================
17-02-28 20:19:58.310 -08 000000039 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:58.310 -08 000000060 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:19:58.310 -08 000000060 INF: Z Motor: Moving to -0.0723 mm, started at -0.0100 mm
17-02-28 20:19:58.310 -08 000000039 INF: Y Motor: Moving to 64.4880 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:19:58.310 -08 000000034 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:58.310 -08 000000060 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:19:58.310 -08 000000072 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:58.310 -08 000000039 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:58.310 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:58.310 -08 000000058 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:58.310 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:58.311 -08 000000051 INF: X Motor: Xmit PR VM\n
17-02-28 20:19:58.311 -08 000000082 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:19:58.311 -08 000000086 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:19:58.311 -08 000000025 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:19:58.311 -08 000000030 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:19:58.311 -08 000000047 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:19:58.311 -08 000000064 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:19:58.311 -08 000000025 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:19:58.311 -08 000000075 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:19:58.311 -08 000000077 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:19:58.312 -08 000000047 INF: ======================================
17-02-28 20:19:58.312 -08 000000086 INF: ======================================
17-02-28 20:19:58.312 -08 000000064 INF: ======================================
17-02-28 20:19:58.312 -08 000000077 INF: ======================================
17-02-28 20:19:58.312 -08 000000030 INF: ======================================
17-02-28 20:19:58.313 -08 000000075 INF: ======================================
17-02-28 20:19:58.313 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:58.313 -08 000000072 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:58.314 -08 000000058 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:58.314 -08 000000082 INF: ======================================
17-02-28 20:19:58.314 -08 000000036 INF: ======================================
17-02-28 20:19:58.314 -08 000000025 INF: ======================================
17-02-28 20:19:58.315 -08 000000072 INF: ======================================
17-02-28 20:19:58.315 -08 000000058 INF: ======================================
17-02-28 20:19:58.315 -08 000000034 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:58.317 -08 000000034 INF: ======================================
17-02-28 20:19:58.318 -08 000000066 INF: ======================================
17-02-28 20:19:58.384 -08 000000034 INF: FPGA: Recv ZTRG 
17-02-28 20:19:58.384 -08 000000060 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:19:58.386 -08 000000051 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:19:58.386 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:19:58.386 -08 000000051 INF: X Motor: Xmit PR VI\n
17-02-28 20:19:58.386 -08 000000039 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:58.386 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:58.448 -08 000000089 INF: FPGA: Recv ZYT 
17-02-28 20:19:58.448 -08 000000060 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:19:58.448 -08 000000060 INF: FPGA: Xmit ZMV 18956\n
17-02-28 20:19:58.450 -08 000000051 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:19:58.450 -08 000000051 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:19:58.450 -08 000000051 INF: X Motor: Moving to 19.4265 mm @15.000 mm/sec, started at 19.9644 mm
17-02-28 20:19:58.450 -08 000000051 INF: X Motor: Xmit MA -16209\n
17-02-28 20:19:58.452 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:19:58.452 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:58.510 -08 000000034 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:19:58.510 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:19:58.512 -08 000000051 INF: X Motor: Recv MA -16209\r\n>
17-02-28 20:19:58.512 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:19:58.512 -08 000000039 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:58.512 -08 000000051 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:19:58.512 -08 000000039 INF: Y Motor: Set target position to 5948805 encoder counts
17-02-28 20:19:58.512 -08 000000039 INF: Y Motor: Xmit s r0xca 5948805\r
17-02-28 20:19:58.571 -08 000000047 INF: FPGA: Recv ZMV 
17-02-28 20:19:58.571 -08 000000060 INF: Z Motor: MoveAndTrigger 'ZMV' command took 123.2301 ms
17-02-28 20:19:58.571 -08 000000060 INF: FPGA: Xmit ZDACR\n
17-02-28 20:19:58.573 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:19:58.573 -08 000000039 INF: Y Motor: Start the move command
17-02-28 20:19:58.573 -08 000000039 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:58.633 -08 000000082 INF: FPGA: Recv ZDACR 18956
17-02-28 20:19:58.633 -08 000000060 INF: Z Motor: MoveAndTrigger took 323.088 ms w/comms
17-02-28 20:19:58.633 -08 000000060 INF: Z Motor: After move to -0.0723, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:19:58.633 -08 000000060 INF: Z Motor: MoveAbsStepped took 323.2983 ms
17-02-28 20:19:58.634 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:58.635 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:19:58.636 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:19:58.636 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:19:58.636 -08 000000039 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:19:58.636 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:58.636 -08 000000058 INF: ===================Camera Arm TDI===================
17-02-28 20:19:58.636 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:58.637 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:58.637 -08 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:58.638 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:58.638 -08 000000058 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:58.638 -08 000000064 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:19:58.698 -08 000000085 INF: FPGA: Recv ZSEL 
17-02-28 20:19:58.699 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:58.699 -08 000000064 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:19:58.759 -08 000000047 INF: FPGA: Recv TDIBB
17-02-28 20:19:58.759 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:58.760 -08 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:58.761 -08 000000039 INF: Y Motor: Unshifted Position: 5875930
17-02-28 20:19:58.761 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:58.762 -08 000000064 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:19:58.763 -08 000000064 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:19:58.763 -08 000000064 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:19:58.811 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:58.821 -08 000000082 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:58.821 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:58.823 -08 000000064 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:19:58.823 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:58.825 -08 000000064 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:19:58.825 -08 000000064 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:19:58.825 -08 000000064 INF: Z Motor: Arming to move to -0.0323 mm
17-02-28 20:19:58.825 -08 000000064 INF: FPGA: Xmit ZYT 6428805 4\n
17-02-28 20:19:58.885 -08 000000050 INF: FPGA: Recv ZYT 
17-02-28 20:19:58.885 -08 000000064 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6375930 enc / 63.759 mm / ) = 6428805 enc / 64.288 mm
17-02-28 20:19:58.885 -08 000000064 INF: FPGA: Xmit ZARM 8471\n
17-02-28 20:19:58.937 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:58.948 -08 000000047 INF: FPGA: Recv ZARM
17-02-28 20:19:58.948 -08 000000064 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.8285 ms
17-02-28 20:19:58.948 -08 000000064 INF: Z Motor: ArmAbsStepped took 122.6891 ms
17-02-28 20:19:58.948 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:58.949 -08 000000051 INF: X Motor: Xmit PR ER\n
17-02-28 20:19:58.949 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:19:58.951 -08 000000064 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:19:58.951 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:19:58.953 -08 000000064 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:19:58.953 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:19:58.954 -08 000000064 INF: ======================================
17-02-28 20:19:59.011 -08 000000051 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:19:59.011 -08 000000051 INF: X Motor: Moved to 19.4272 after 499 ms
17-02-28 20:19:59.011 -08 000000051 INF: ======================================
17-02-28 20:19:59.072 -08 000000039 INF: Y Motor: Unshifted Position: 5948807
17-02-28 20:19:59.072 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:59.072 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:59.137 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:19:59.137 -08 000000039 INF: Y Motor: Moved to 64.4881 after 501 ms
17-02-28 20:19:59.137 -08 000000039 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:59.198 -08 000000039 INF: Y Motor: Recv v 4096\r
17-02-28 20:19:59.198 -08 000000039 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:59.198 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:59.260 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:19:59.260 -08 000000039 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:59.260 -08 000000039 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:59.322 -08 000000039 INF: Y Motor: Recv v 402653184\r
17-02-28 20:19:59.322 -08 000000039 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:19:59.322 -08 000000039 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:59.322 -08 000000039 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:59.386 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:19:59.386 -08 000000039 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:59.386 -08 000000039 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:59.386 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:59.448 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:19:59.448 -08 000000039 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:59.448 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:59.509 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:19:59.509 -08 000000039 INF: ======================================
17-02-28 20:19:59.510 -08 000000052 INF: ===================Move X,Y===================
17-02-28 20:19:59.511 -08 000000052 INF: ======================================
17-02-28 20:19:59.587 -08 000000058 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:59.587 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:59.587 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:59.602 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:59.604 -08 000000058 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:00.608 -08 000000058 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:00.608 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:00.608 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:00.624 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:00.626 -08 000000058 INF: ===================Camera Arm TDI===================
17-02-28 20:20:00.627 -08 000000058 INF: ======================================
17-02-28 20:20:00.628 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:00.629 -08 000000060 INF: ======================================
17-02-28 20:20:00.630 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:00.631 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:00.631 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:20:00.631 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:20:00.696 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:00.696 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:20:00.757 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:20:00.758 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:20:00.758 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:00.758 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:00.817 -08 000000089 INF: FPGA: Recv TDIYERD 6448806
17-02-28 20:20:00.817 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448806 counts (64.488 mm)
17-02-28 20:20:00.817 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:00.818 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:00.818 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:00.818 -08 000000030 INF: ===================Set YMotor gains for scans===================
17-02-28 20:20:00.819 -08 000000030 INF: ======================================
17-02-28 20:20:00.819 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:00.820 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:20:00.820 -08 000000073 INF: FPGA: Xmit TDIYPOS 6337880\n
17-02-28 20:20:00.879 -08 000000033 INF: FPGA: Recv TDIYPOS
17-02-28 20:20:00.879 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:00.880 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:20:00.880 -08 000000073 INF: FPGA: Xmit TDIYARM3 139264 6428805 1 1\n
17-02-28 20:20:00.943 -08 000000051 INF: FPGA: Recv TDIYARM3
17-02-28 20:20:00.943 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:00.944 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:00.945 -08 000000073 INF: ======================================
17-02-28 20:20:00.946 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:00.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:00.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:00.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:00.948 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:00.949 -08 000000057 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:20:00.949 -08 000000050 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:20:00.949 -08 000000057 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:20:00.949 -08 000000057 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:20:00.949 -08 000000057 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:20:00.949 -08 000000050 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:20:00.949 -08 000000057 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:20:00.949 -08 000000050 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:20:00.949 -08 000000050 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:20:00.950 -08 000000050 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:20:01.317 -08 000000109 INF: FPGA: Recv EX2MV
17-02-28 20:20:01.317 -08 000000109 INF: FPGA: Recv EX1MV
17-02-28 20:20:01.317 -08 000000057 INF: Excitation Filter 2: Moved -107 steps in 367.7552 ms
17-02-28 20:20:01.317 -08 000000050 INF: Excitation Filter 1: Moved -107 steps in 367.6465 ms
17-02-28 20:20:01.317 -08 000000057 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.8571 ms
17-02-28 20:20:01.317 -08 000000050 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.7997 ms
17-02-28 20:20:01.317 -08 000000050 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.916 ms
17-02-28 20:20:01.317 -08 000000057 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.9617 ms
17-02-28 20:20:01.317 -08 000000050 INF: ======================================
17-02-28 20:20:01.317 -08 000000057 INF: ======================================
17-02-28 20:20:01.318 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:01.319 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:01.320 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:20:01.320 -08 000000089 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:01.320 -08 000000039 INF: ===================FPGA Z Wait===================
17-02-28 20:20:01.320 -08 000000060 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:01.321 -08 000000060 INF: Y Motor: Moving to 14.8397 mm @6.500 mm/sec, started at 64.4881 mm
17-02-28 20:20:01.321 -08 000000060 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:01.321 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:01.321 -08 000000082 INF: ===================Camera TDI, Parallel===================
17-02-28 20:20:01.321 -08 000000089 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:20:01.321 -08 000000089 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:20:01.322 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:20:01.322 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:20:01.324 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:01.324 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:01.324 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:01.324 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:01.324 -08 000000039 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:20:01.383 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:20:01.383 -08 000000060 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:01.383 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:01.445 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:20:01.445 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:01.474 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:01.474 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:01.474 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:01.474 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:01.508 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:20:01.508 -08 000000060 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:01.508 -08 000000060 INF: Y Motor: Set target position to 983971 encoder counts
17-02-28 20:20:01.508 -08 000000060 INF: Y Motor: Xmit s r0xca 983971\r
17-02-28 20:20:01.568 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:20:01.568 -08 000000060 INF: Y Motor: Start the move command
17-02-28 20:20:01.568 -08 000000060 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:01.624 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:01.624 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:01.624 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:01.624 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:01.630 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:20:01.630 -08 000000060 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:20:01.630 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:01.692 -08 000000069 INF: FPGA: Recv ZWAIT 
17-02-28 20:20:01.692 -08 000000039 INF: ======================================
17-02-28 20:20:01.756 -08 000000060 INF: Y Motor: Unshifted Position: 5885647
17-02-28 20:20:01.774 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:01.774 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:01.774 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:01.774 -08 000000038 INF: ===================Camera #0 Frame #5===================
17-02-28 20:20:01.774 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:01.774 -08 000000033 INF: ===================Camera #2 Frame #5===================
17-02-28 20:20:01.806 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:01.932 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:01.940 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:20:01.940 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:20:01.940 -08 000000033 INF: ===================Camera #2 Frame #11===================
17-02-28 20:20:01.941 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:20:01.941 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:20:01.941 -08 000000038 INF: ===================Camera #0 Frame #11===================
17-02-28 20:20:02.067 -08 000000060 INF: Y Motor: Unshifted Position: 5683286
17-02-28 20:20:02.109 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:20:02.109 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:20:02.109 -08 000000033 INF: ===================Camera #2 Frame #17===================
17-02-28 20:20:02.113 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:20:02.113 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:20:02.113 -08 000000038 INF: ===================Camera #0 Frame #17===================
17-02-28 20:20:02.117 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:02.243 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:02.278 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:20:02.278 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:20:02.278 -08 000000033 INF: ===================Camera #2 Frame #23===================
17-02-28 20:20:02.284 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:20:02.284 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:20:02.284 -08 000000038 INF: ===================Camera #0 Frame #23===================
17-02-28 20:20:02.379 -08 000000060 INF: Y Motor: Unshifted Position: 5480491
17-02-28 20:20:02.429 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:02.449 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:20:02.449 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:20:02.449 -08 000000033 INF: ===================Camera #2 Frame #29===================
17-02-28 20:20:02.454 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:20:02.454 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:20:02.454 -08 000000038 INF: ===================Camera #0 Frame #30===================
17-02-28 20:20:02.555 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:02.620 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:20:02.620 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:20:02.620 -08 000000033 INF: ===================Camera #2 Frame #36===================
17-02-28 20:20:02.627 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:20:02.627 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:20:02.627 -08 000000038 INF: ===================Camera #0 Frame #36===================
17-02-28 20:20:02.693 -08 000000060 INF: Y Motor: Unshifted Position: 5276172
17-02-28 20:20:02.743 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:02.794 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:20:02.794 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:20:02.794 -08 000000033 INF: ===================Camera #2 Frame #42===================
17-02-28 20:20:02.797 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:20:02.797 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:20:02.797 -08 000000038 INF: ===================Camera #0 Frame #42===================
17-02-28 20:20:02.866 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:02.965 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:20:02.965 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:20:02.965 -08 000000033 INF: ===================Camera #2 Frame #48===================
17-02-28 20:20:02.967 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:20:02.967 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:20:02.967 -08 000000038 INF: ===================Camera #0 Frame #48===================
17-02-28 20:20:03.004 -08 000000060 INF: Y Motor: Unshifted Position: 5074020
17-02-28 20:20:03.054 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.136 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:20:03.136 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:20:03.136 -08 000000033 INF: ===================Camera #2 Frame #55===================
17-02-28 20:20:03.137 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:20:03.137 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:20:03.137 -08 000000038 INF: ===================Camera #0 Frame #55===================
17-02-28 20:20:03.180 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.310 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:20:03.310 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:20:03.310 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:20:03.310 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:20:03.310 -08 000000033 INF: ===================Camera #2 Frame #61===================
17-02-28 20:20:03.310 -08 000000038 INF: ===================Camera #0 Frame #61===================
17-02-28 20:20:03.315 -08 000000060 INF: Y Motor: Unshifted Position: 4871651
17-02-28 20:20:03.365 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.480 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:20:03.480 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:20:03.480 -08 000000038 INF: ===================Camera #0 Frame #67===================
17-02-28 20:20:03.481 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:20:03.481 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:20:03.481 -08 000000033 INF: ===================Camera #2 Frame #67===================
17-02-28 20:20:03.492 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.629 -08 000000060 INF: Y Motor: Unshifted Position: 4668637
17-02-28 20:20:03.650 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:20:03.650 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:20:03.650 -08 000000038 INF: ===================Camera #0 Frame #74===================
17-02-28 20:20:03.652 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:20:03.652 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:20:03.652 -08 000000033 INF: ===================Camera #2 Frame #74===================
17-02-28 20:20:03.679 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.803 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.824 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:20:03.824 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:20:03.824 -08 000000038 INF: ===================Camera #0 Frame #80===================
17-02-28 20:20:03.826 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:20:03.826 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:20:03.826 -08 000000033 INF: ===================Camera #2 Frame #80===================
17-02-28 20:20:03.941 -08 000000060 INF: Y Motor: Unshifted Position: 4464526
17-02-28 20:20:03.991 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.994 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:20:03.994 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:20:03.994 -08 000000038 INF: ===================Camera #0 Frame #86===================
17-02-28 20:20:03.997 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:20:03.997 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:20:03.997 -08 000000033 INF: ===================Camera #2 Frame #86===================
17-02-28 20:20:04.114 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:04.164 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:20:04.164 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:20:04.164 -08 000000038 INF: ===================Camera #0 Frame #93===================
17-02-28 20:20:04.168 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:20:04.168 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:20:04.168 -08 000000033 INF: ===================Camera #2 Frame #93===================
17-02-28 20:20:04.252 -08 000000060 INF: Y Motor: Unshifted Position: 4262384
17-02-28 20:20:04.302 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:04.335 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:20:04.335 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:20:04.335 -08 000000038 INF: ===================Camera #0 Frame #99===================
17-02-28 20:20:04.340 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:20:04.340 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:20:04.340 -08 000000033 INF: ===================Camera #2 Frame #99===================
17-02-28 20:20:04.428 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:04.503 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:20:04.503 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:20:04.503 -08 000000038 INF: ===================Camera #0 Frame #105===================
17-02-28 20:20:04.509 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:20:04.509 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:20:04.509 -08 000000033 INF: ===================Camera #2 Frame #105===================
17-02-28 20:20:04.563 -08 000000060 INF: Y Motor: Unshifted Position: 4060003
17-02-28 20:20:04.613 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:04.672 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:20:04.672 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:20:04.672 -08 000000038 INF: ===================Camera #0 Frame #111===================
17-02-28 20:20:04.678 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:20:04.678 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:20:04.678 -08 000000033 INF: ===================Camera #2 Frame #111===================
17-02-28 20:20:04.739 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:04.841 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:20:04.841 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:20:04.841 -08 000000038 INF: ===================Camera #0 Frame #117===================
17-02-28 20:20:04.847 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:20:04.847 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:20:04.847 -08 000000033 INF: ===================Camera #2 Frame #118===================
17-02-28 20:20:04.877 -08 000000060 INF: Y Motor: Unshifted Position: 3857856
17-02-28 20:20:04.927 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.010 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:20:05.010 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:20:05.010 -08 000000038 INF: ===================Camera #0 Frame #124===================
17-02-28 20:20:05.020 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:20:05.020 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:20:05.020 -08 000000033 INF: ===================Camera #2 Frame #124===================
17-02-28 20:20:05.050 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.182 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:20:05.182 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:20:05.182 -08 000000038 INF: ===================Camera #0 Frame #130===================
17-02-28 20:20:05.188 -08 000000060 INF: Y Motor: Unshifted Position: 3653540
17-02-28 20:20:05.189 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:20:05.189 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:20:05.189 -08 000000033 INF: ===================Camera #2 Frame #130===================
17-02-28 20:20:05.238 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.350 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:20:05.350 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:20:05.350 -08 000000038 INF: ===================Camera #0 Frame #136===================
17-02-28 20:20:05.358 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:20:05.358 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:20:05.358 -08 000000033 INF: ===================Camera #2 Frame #137===================
17-02-28 20:20:05.364 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.500 -08 000000060 INF: Y Motor: Unshifted Position: 3450737
17-02-28 20:20:05.519 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:20:05.519 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:20:05.519 -08 000000038 INF: ===================Camera #0 Frame #142===================
17-02-28 20:20:05.530 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:20:05.530 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:20:05.530 -08 000000033 INF: ===================Camera #2 Frame #143===================
17-02-28 20:20:05.550 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.676 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.687 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:20:05.687 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:20:05.687 -08 000000038 INF: ===================Camera #0 Frame #149===================
17-02-28 20:20:05.699 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:20:05.699 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:20:05.699 -08 000000033 INF: ===================Camera #2 Frame #149===================
17-02-28 20:20:05.811 -08 000000060 INF: Y Motor: Unshifted Position: 3248373
17-02-28 20:20:05.859 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:20:05.859 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:20:05.859 -08 000000038 INF: ===================Camera #0 Frame #155===================
17-02-28 20:20:05.861 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.869 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:20:05.869 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:20:05.869 -08 000000033 INF: ===================Camera #2 Frame #155===================
17-02-28 20:20:05.987 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:06.028 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:20:06.028 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:20:06.028 -08 000000038 INF: ===================Camera #0 Frame #161===================
17-02-28 20:20:06.039 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:20:06.039 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:20:06.039 -08 000000033 INF: ===================Camera #2 Frame #162===================
17-02-28 20:20:06.125 -08 000000060 INF: Y Motor: Unshifted Position: 3044930
17-02-28 20:20:06.175 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:06.197 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:20:06.197 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:20:06.197 -08 000000038 INF: ===================Camera #0 Frame #167===================
17-02-28 20:20:06.212 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:20:06.212 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:20:06.212 -08 000000033 INF: ===================Camera #2 Frame #168===================
17-02-28 20:20:06.299 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:06.367 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:20:06.367 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:20:06.367 -08 000000038 INF: ===================Camera #0 Frame #174===================
17-02-28 20:20:06.383 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:20:06.383 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:20:06.383 -08 000000033 INF: ===================Camera #2 Frame #174===================
17-02-28 20:20:06.439 -08 000000060 INF: Y Motor: Unshifted Position: 2843216
17-02-28 20:20:06.489 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:06.539 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:20:06.539 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:20:06.539 -08 000000038 INF: ===================Camera #0 Frame #180===================
17-02-28 20:20:06.553 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:20:06.553 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:20:06.553 -08 000000033 INF: ===================Camera #2 Frame #180===================
17-02-28 20:20:06.611 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:06.708 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:20:06.708 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:20:06.708 -08 000000038 INF: ===================Camera #0 Frame #186===================
17-02-28 20:20:06.723 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:20:06.723 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:20:06.723 -08 000000033 INF: ===================Camera #2 Frame #187===================
17-02-28 20:20:06.749 -08 000000060 INF: Y Motor: Unshifted Position: 2639112
17-02-28 20:20:06.799 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:06.877 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:20:06.877 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:20:06.877 -08 000000038 INF: ===================Camera #0 Frame #192===================
17-02-28 20:20:06.897 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:20:06.897 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:20:06.897 -08 000000033 INF: ===================Camera #2 Frame #193===================
17-02-28 20:20:06.925 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.047 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:20:07.047 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:20:07.047 -08 000000038 INF: ===================Camera #0 Frame #199===================
17-02-28 20:20:07.060 -08 000000060 INF: Y Motor: Unshifted Position: 2436759
17-02-28 20:20:07.067 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:20:07.067 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:20:07.067 -08 000000033 INF: ===================Camera #2 Frame #199===================
17-02-28 20:20:07.110 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.220 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:20:07.220 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:20:07.220 -08 000000038 INF: ===================Camera #0 Frame #205===================
17-02-28 20:20:07.237 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.237 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:20:07.237 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:20:07.237 -08 000000033 INF: ===================Camera #2 Frame #206===================
17-02-28 20:20:07.374 -08 000000060 INF: Y Motor: Unshifted Position: 2234601
17-02-28 20:20:07.390 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:20:07.390 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:20:07.390 -08 000000038 INF: ===================Camera #0 Frame #211===================
17-02-28 20:20:07.410 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:20:07.410 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:20:07.410 -08 000000033 INF: ===================Camera #2 Frame #212===================
17-02-28 20:20:07.424 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.548 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.560 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:20:07.560 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:20:07.560 -08 000000038 INF: ===================Camera #0 Frame #218===================
17-02-28 20:20:07.580 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:20:07.580 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:20:07.580 -08 000000033 INF: ===================Camera #2 Frame #218===================
17-02-28 20:20:07.686 -08 000000060 INF: Y Motor: Unshifted Position: 2031584
17-02-28 20:20:07.733 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:20:07.733 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:20:07.733 -08 000000038 INF: ===================Camera #0 Frame #224===================
17-02-28 20:20:07.736 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.751 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:20:07.751 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:20:07.751 -08 000000033 INF: ===================Camera #2 Frame #225===================
17-02-28 20:20:07.859 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.903 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:20:07.903 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:20:07.903 -08 000000038 INF: ===================Camera #0 Frame #230===================
17-02-28 20:20:07.925 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:20:07.925 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:20:07.925 -08 000000033 INF: ===================Camera #2 Frame #231===================
17-02-28 20:20:07.997 -08 000000060 INF: Y Motor: Unshifted Position: 1827481
17-02-28 20:20:08.047 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:08.073 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:20:08.073 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:20:08.073 -08 000000038 INF: ===================Camera #0 Frame #236===================
17-02-28 20:20:08.096 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:20:08.096 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:20:08.096 -08 000000033 INF: ===================Camera #2 Frame #237===================
17-02-28 20:20:08.170 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:08.243 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:20:08.243 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:20:08.243 -08 000000038 INF: ===================Camera #0 Frame #243===================
17-02-28 20:20:08.266 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:20:08.266 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:20:08.266 -08 000000033 INF: ===================Camera #2 Frame #244===================
17-02-28 20:20:08.308 -08 000000060 INF: Y Motor: Unshifted Position: 1624902
17-02-28 20:20:08.358 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:08.416 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:20:08.416 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:20:08.416 -08 000000038 INF: ===================Camera #0 Frame #249===================
17-02-28 20:20:08.440 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:20:08.440 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:20:08.440 -08 000000033 INF: ===================Camera #2 Frame #250===================
17-02-28 20:20:08.482 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:08.586 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:20:08.586 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:20:08.586 -08 000000038 INF: ===================Camera #0 Frame #255===================
17-02-28 20:20:08.610 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:20:08.610 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:20:08.610 -08 000000033 INF: ===================Camera #2 Frame #256===================
17-02-28 20:20:08.620 -08 000000060 INF: Y Motor: Unshifted Position: 1422097
17-02-28 20:20:08.670 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:08.756 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:20:08.756 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:20:08.756 -08 000000038 INF: ===================Camera #0 Frame #262===================
17-02-28 20:20:08.780 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:20:08.780 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:20:08.780 -08 000000033 INF: ===================Camera #2 Frame #262===================
17-02-28 20:20:08.796 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:08.929 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:20:08.929 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:20:08.929 -08 000000038 INF: ===================Camera #0 Frame #268===================
17-02-28 20:20:08.934 -08 000000060 INF: Y Motor: Unshifted Position: 1219939
17-02-28 20:20:08.950 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:20:08.950 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:20:08.950 -08 000000033 INF: ===================Camera #2 Frame #269===================
17-02-28 20:20:08.984 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:09.055 -08 000000039 INF: FPGA: Recv TDIYWAIT
17-02-28 20:20:09.055 -08 000000089 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:09.057 -08 000000089 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:20:09.058 -08 000000109 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:20:09.058 -08 000000058 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:20:09.058 -08 000000109 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:20:09.058 -08 000000109 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:20:09.058 -08 000000109 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:20:09.058 -08 000000109 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:20:09.058 -08 000000058 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:20:09.058 -08 000000058 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:20:09.058 -08 000000058 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:20:09.059 -08 000000058 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:20:09.099 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:09.099 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:09.099 -08 000000038 INF: ===================Camera #0 Frame #272===================
17-02-28 20:20:09.107 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:09.112 -08 000000038 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:09.113 -08 000000038 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:09.245 -08 000000060 INF: Y Motor: Unshifted Position: 1015626
17-02-28 20:20:09.277 -08 000000038 INF: Camera #0 ReleaseBuffer
17-02-28 20:20:09.277 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:09.277 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:09.277 -08 000000033 INF: ===================Camera #2 Frame #272===================
17-02-28 20:20:09.277 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:20:09.286 -08 000000033 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:09.287 -08 000000033 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:09.295 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:09.310 -08 000000038 INF: ======================================
17-02-28 20:20:09.429 -08 000000078 INF: FPGA: Recv EX1MV
17-02-28 20:20:09.429 -08 000000078 INF: FPGA: Recv EX2MV
17-02-28 20:20:09.429 -08 000000058 INF: Excitation Filter 2: Moved 107 steps in 370.6057 ms
17-02-28 20:20:09.429 -08 000000058 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.7201 ms
17-02-28 20:20:09.429 -08 000000058 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.8243 ms
17-02-28 20:20:09.429 -08 000000109 INF: Excitation Filter 1: Moved 107 steps in 370.8338 ms
17-02-28 20:20:09.429 -08 000000109 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.041 ms
17-02-28 20:20:09.429 -08 000000109 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.1649 ms
17-02-28 20:20:09.429 -08 000000058 INF: ======================================
17-02-28 20:20:09.429 -08 000000109 INF: ======================================
17-02-28 20:20:09.431 -08 000000060 INF: Y Motor: Unshifted Position: 983971
17-02-28 20:20:09.431 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:09.431 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:09.431 -08 000000089 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:09.432 -08 000000089 INF: ======================================
17-02-28 20:20:09.484 -08 000000033 INF: Camera #2 ReleaseBuffer
17-02-28 20:20:09.484 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:20:09.495 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:20:09.495 -08 000000060 INF: Y Motor: Moved to 14.8397 after 7864 ms
17-02-28 20:20:09.495 -08 000000060 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:09.519 -08 000000033 INF: ======================================
17-02-28 20:20:09.520 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:20:09.521 -08 000000082 INF: ======================================
17-02-28 20:20:09.557 -08 000000060 INF: Y Motor: Recv v 4097\r
17-02-28 20:20:09.557 -08 000000060 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:09.557 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:09.619 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:20:09.619 -08 000000060 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:09.619 -08 000000060 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:09.680 -08 000000060 INF: Y Motor: Recv v 134217728\r
17-02-28 20:20:09.680 -08 000000060 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:20:09.680 -08 000000060 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:09.680 -08 000000060 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:09.745 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:20:09.745 -08 000000060 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:09.745 -08 000000060 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:09.745 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:09.806 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:20:09.806 -08 000000060 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:09.806 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:09.870 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:20:09.870 -08 000000060 INF: ======================================
17-02-28 20:20:09.871 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:09.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:09.873 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:09.873 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:20:09.928 -08 000000050 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:20:09.928 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:09.992 -08 000000010 INF: FPGA: Recv TDIYERD 1483972
17-02-28 20:20:09.992 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:20:10.054 -08 000000085 INF: FPGA: Recv ZADCR 18321
17-02-28 20:20:10.054 -08 000000018 INF: At scan end Y pos = 14.840 and Z pos = -0.070. Y moved -48.539 mm
17-02-28 20:20:10.054 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:20:10.116 -08 000000078 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:20:10.116 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:20:10.116 -08 000000018 INF: TDIScan finished after 11829.5274 ms
17-02-28 20:20:10.116 -08 000000018 INF: Image[0]: Y should trigger at 63.379 mm, 2nd row was at 64.288 mm (error = 0.909 mm)
17-02-28 20:20:10.116 -08 000000018 INF: Image[2]: Y should trigger at 63.379 mm, 2nd row was at 64.288 mm (error = 0.909 mm)
17-02-28 20:20:10.118 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.152 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.825 um
17-02-28 20:20:10.152 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.153 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:20:10.180 -08 000000047 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:20:10.180 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.181 -08 000000069 INF: ===================Dither Clean Up Command===================
17-02-28 20:20:10.181 -08 000000025 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:20:10.181 -08 000000101 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:20:10.181 -08 000000064 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:20:10.182 -08 000000025 INF: ======================================
17-02-28 20:20:10.182 -08 000000064 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:20:10.182 -08 000000064 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:20:10.182 -08 000000101 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:10.182 -08 000000101 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:10.182 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:10.182 -08 000000089 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:10.183 -08 000000073 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:20:10.185 -08 000000089 INF: ===================LFT:Extracting coords===================
17-02-28 20:20:10.210 -08 000000089 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:10.211 -08 000000089 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:20:10.212 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.212 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.212 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.212 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.212 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:10.212 -08 000000039 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:10.212 -08 000000058 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:10.212 -08 000000057 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:10.242 -08 000000108 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:10.242 -08 000000108 INF: FPGA: Recv ZSEL 
17-02-28 20:20:10.242 -08 000000073 INF: FPGA: Xmit ZDACW 18956\n
17-02-28 20:20:10.242 -08 000000064 INF: ======================================
17-02-28 20:20:10.244 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:20:10.244 -08 000000101 INF: ======================================
17-02-28 20:20:10.286 -08 000000033 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:10.286 -08 000000039 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:10.286 -08 000000058 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:10.287 -08 000000057 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:10.303 -08 000000087 INF: FPGA: Recv ZDACW 
17-02-28 20:20:10.303 -08 000000073 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:20:10.304 -08 000000073 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:20:10.365 -08 000000051 INF: FPGA: Recv TDIBB
17-02-28 20:20:10.365 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:10.366 -08 000000073 INF: ======================================
17-02-28 20:20:10.437 -08 000000033 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:20:10.438 -08 000000033 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0523143805926639 in the next cycle, cycle 4 FC:A, C:3,L:6,B
17-02-28 20:20:10.438 -08 000000058 INF: LFT found best fwhm score 2.000112 in 151 ms
17-02-28 20:20:10.438 -08 000000058 INF: LFT found good score at index 3645 with fwhm value 2.000112. Next cycle, cycle 4 starting Z position for bottom surface is at -0.052 mm FC:A, C:3,L:6,B
17-02-28 20:20:10.438 -08 000000039 INF: LFT found best fwhm score 2.000099 in 152 ms
17-02-28 20:20:10.438 -08 000000039 INF: LFT found good score at index 5121 with fwhm value 2.000099. Next cycle, cycle 4 starting Z position for bottom surface is at -0.052 mm FC:A, C:3,L:6,B
17-02-28 20:20:10.438 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.438 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.438 -08 000000057 INF: LFT found best fwhm score 2.026447 in 151 ms
17-02-28 20:20:10.438 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.438 -08 000000057 INF: LFT found good score at index 7325 with fwhm value 2.026447. Next cycle, cycle 4 starting Z position for bottom surface is at -0.052 mm FC:A, C:3,L:6,B
17-02-28 20:20:10.438 -08 000000058 INF: ======================================
17-02-28 20:20:10.438 -08 000000033 INF: ======================================
17-02-28 20:20:10.438 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.438 -08 000000039 INF: ======================================
17-02-28 20:20:10.439 -08 000000057 INF: ======================================
17-02-28 20:20:10.440 -08 000000089 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:10.440 -08 000000089 INF: LFT weighted average best Z for bottom surface is at -0.052mm FC:A, C:3,L:6,B
17-02-28 20:20:10.441 -08 000000089 INF: ======================================
17-02-28 20:20:10.442 -08 000000069 INF: ======================================
17-02-28 20:20:10.443 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:20:10.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:20:10.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:20:10.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:20:10.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494===================
17-02-28 20:20:10.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494===================
17-02-28 20:20:10.446 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:20:10.446 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494===================
17-02-28 20:20:10.446 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:20:10.446 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:20:10.469 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:20:10.469 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:20:10.470 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494===================
17-02-28 20:20:10.470 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:10.470 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494===================
17-02-28 20:20:10.470 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:20:10.470 -08 000000018 INF: Transformed XStagePosition from 20.50033 mm to 20.5258637852967 mm.
17-02-28 20:20:10.483 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4894257396236 mm.
17-02-28 20:20:10.483 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2894257396236 mm.
17-02-28 20:20:10.483 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3801757396236 mm.
17-02-28 20:20:10.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:20:10.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.486 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -72.3 um, section = F_1
17-02-28 20:20:10.519 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:10.520 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:10.521 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:20:10.521 -08 000000081 INF: ===================MoveEmissionFilters===================
17-02-28 20:20:10.522 -08 000000069 INF: ===================Move X,Y, Parallel===================
17-02-28 20:20:10.522 -08 000000057 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:10.523 -08 000000057 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:20:10.523 -08 000000057 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:20:10.523 -08 000000057 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:10.524 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:10.524 -08 000000072 INF: ===================Move X Motor without settling===================
17-02-28 20:20:10.525 -08 000000072 INF: X Motor: Xmit PR VM\n
17-02-28 20:20:10.525 -08 000000057 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:20:10.525 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:10.527 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:10.528 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:10.529 -08 000000077 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:10.529 -08 000000077 INF: Y Motor: Moving to 64.4894 mm @25.000 mm/sec, started at 14.8397 mm
17-02-28 20:20:10.529 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:10.529 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:10.529 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":6,"Tile":2104,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF178","HCSMMF184","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.529 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:20:10.530 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:10.531 -08 000000078 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:20:10.531 -08 000000078 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:10.531 -08 000000078 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:20:10.532 -08 000000060 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:20:10.533 -08 000000060 INF: ======================================
17-02-28 20:20:10.535 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:10.535 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:10.547 -08 000000058 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:20:10.548 -08 000000058 INF: ======================================
17-02-28 20:20:10.550 -08 000000058 INF: ===================Camera Arm TDI===================
17-02-28 20:20:10.550 -08 000000109 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:20:10.550 -08 000000109 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:20:10.551 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:10.551 -08 000000109 INF: ======================================
17-02-28 20:20:10.551 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:10.551 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:10.552 -08 000000058 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:10.552 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:10.552 -08 000000075 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:20:10.553 -08 000000039 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:20:10.553 -08 000000109 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:20:10.553 -08 000000075 INF: ======================================
17-02-28 20:20:10.553 -08 000000109 INF: ======================================
17-02-28 20:20:10.554 -08 000000035 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:20:10.554 -08 000000039 INF: ======================================
17-02-28 20:20:10.554 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:10.554 -08 000000038 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:20:10.555 -08 000000035 INF: ======================================
17-02-28 20:20:10.555 -08 000000038 INF: ======================================
17-02-28 20:20:10.556 -08 000000064 INF: ======================================
17-02-28 20:20:10.561 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:10.562 -08 000000060 INF: ======================================
17-02-28 20:20:10.566 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:10.568 -08 000000086 INF: ======================================
17-02-28 20:20:10.575 -08 000000086 INF: FPGA: Recv ZSEL 
17-02-28 20:20:10.577 -08 000000072 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:20:10.577 -08 000000072 INF: X Motor: Xmit PR VI\n
17-02-28 20:20:10.578 -08 000000078 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:10.578 -08 000000078 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:20:10.579 -08 000000010 INF: ======================================
17-02-28 20:20:10.580 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:20:10.580 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:10.580 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:10.581 -08 000000081 INF: ======================================
17-02-28 20:20:10.603 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":6,"Tile":2101,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF233","HCSMMF206","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.622 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":6,"Tile":2110,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF261","HCSMMF185","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.633 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":6,"Tile":2107,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF183","HCSMMF252","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.635 -08 000000030 INF: FPGA: Recv TDIBB
17-02-28 20:20:10.635 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":6,"Tile":2109,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF268","HCSMMF176","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.636 -08 000000078 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:10.637 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:20:10.637 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:10.637 -08 000000072 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:20:10.637 -08 000000078 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:20:10.637 -08 000000072 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:20:10.637 -08 000000072 INF: X Motor: Moving to 20.5259 mm @15.000 mm/sec, started at 19.4272 mm
17-02-28 20:20:10.637 -08 000000072 INF: X Motor: Xmit MA -15759\n
17-02-28 20:20:10.637 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:10.639 -08 000000078 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:20:10.639 -08 000000078 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:20:10.639 -08 000000078 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:20:10.674 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":6,"Tile":2106,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF264","HCSMMF235","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.677 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":6,"Tile":2102,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF250","HCSMMF270","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.678 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":6,"Tile":2108,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF228","HCSMMF280","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.687 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":6,"Tile":2103,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF246","HCSMMF240","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.688 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":6,"Tile":2112,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF177","HCSMMF242","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.688 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":6,"Tile":2113,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF251","HCSMMF191","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.690 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":6,"Tile":2111,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF187","HCSMMF238","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.691 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":6,"Tile":2105,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF205","HCSMMF237","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.692 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":6,"Tile":2115,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF216","HCSMMF274","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.692 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":6,"Tile":2119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF284","HCSMMF276","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.694 -08 000000035 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:10.694 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":6,"Tile":2114,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF236","HCSMMF275","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.694 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:10.695 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":6,"Tile":2116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF201","HCSMMF267","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.696 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:20:10.696 -08 000000072 INF: X Motor: Recv MA -15759\r\n>
17-02-28 20:20:10.696 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:10.696 -08 000000072 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:20:10.696 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":6,"Tile":2118,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF202","HCSMMF266","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.696 -08 000000078 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:20:10.696 -08 000000077 INF: Y Motor: Set target position to 5948943 encoder counts
17-02-28 20:20:10.696 -08 000000077 INF: Y Motor: Xmit s r0xca 5948943\r
17-02-28 20:20:10.696 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:10.697 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":6,"Tile":2117,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF254","HCSMMF255","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.698 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":6,"Tile":2121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF287","HCSMMF188","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.698 -08 000000078 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:20:10.698 -08 000000078 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:20:10.698 -08 000000078 INF: Z Motor: Arming to move to -0.0323 mm
17-02-28 20:20:10.698 -08 000000078 INF: FPGA: Xmit ZYT 6428943 4\n
17-02-28 20:20:10.699 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":6,"Tile":2120,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF247","HCSMMF245","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.699 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":6,"Tile":2122,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF282","HCSMMF241","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.700 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":6,"Tile":2128,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF279","HCSMMF215","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.701 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":6,"Tile":2125,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF281","HCSMMF180","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.702 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":6,"Tile":2127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF214","HCSMMF258","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.703 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":6,"Tile":2126,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF232","HCSMMF182","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.704 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":6,"Tile":2124,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF200","HCSMMF223","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.706 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":6,"Tile":2123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF208","HCSMMF259","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.709 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:10.715 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:20:10.756 -08 000000060 INF: FPGA: Recv ZYT 
17-02-28 20:20:10.756 -08 000000078 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1483971 enc / 14.840 mm / ) = 6428943 enc / 64.289 mm
17-02-28 20:20:10.756 -08 000000078 INF: FPGA: Xmit ZARM 8471\n
17-02-28 20:20:10.758 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:20:10.758 -08 000000077 INF: Y Motor: Start the move command
17-02-28 20:20:10.758 -08 000000077 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:10.809 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:10.809 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:20:10.818 -08 000000064 INF: FPGA: Recv ZARM
17-02-28 20:20:10.818 -08 000000078 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8895 ms
17-02-28 20:20:10.818 -08 000000078 INF: Z Motor: ArmAbsStepped took 119.6812 ms
17-02-28 20:20:10.818 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:10.820 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:20:10.820 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:20:10.820 -08 000000077 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:20:10.820 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:10.821 -08 000000078 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:20:10.821 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:20:10.823 -08 000000078 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:20:10.823 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:20:10.825 -08 000000078 INF: ======================================
17-02-28 20:20:10.845 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:10.850 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:20:10.936 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:10.942 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:20:10.944 -08 000000077 INF: Y Motor: Unshifted Position: 1065524
17-02-28 20:20:10.994 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:11.048 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:11.054 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:20:11.124 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:11.141 -08 000000058 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:11.141 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:11.141 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:11.156 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:11.158 -08 000000058 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:11.165 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:11.258 -08 000000077 INF: Y Motor: Unshifted Position: 1776473
17-02-28 20:20:11.308 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:11.320 -08 000000072 INF: X Motor: Xmit PR ER\n
17-02-28 20:20:11.382 -08 000000072 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:20:11.382 -08 000000072 INF: X Motor: Moved to 20.5259 after 686 ms
17-02-28 20:20:11.382 -08 000000072 INF: ======================================
17-02-28 20:20:11.432 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:11.474 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:20:11.570 -08 000000077 INF: Y Motor: Unshifted Position: 2558993
17-02-28 20:20:11.620 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:11.744 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:11.763 -08 000000058 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:11.763 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:11.763 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:11.778 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:11.780 -08 000000058 INF: ===================Camera Arm TDI===================
17-02-28 20:20:11.781 -08 000000058 INF: ======================================
17-02-28 20:20:11.782 -08 000000057 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:11.783 -08 000000057 INF: ======================================
17-02-28 20:20:11.880 -08 000000077 INF: Y Motor: Unshifted Position: 3331439
17-02-28 20:20:11.930 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.059 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.196 -08 000000077 INF: Y Motor: Unshifted Position: 4109838
17-02-28 20:20:12.246 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.368 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.504 -08 000000077 INF: Y Motor: Unshifted Position: 4893107
17-02-28 20:20:12.554 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.682 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.818 -08 000000077 INF: Y Motor: Unshifted Position: 5669511
17-02-28 20:20:12.868 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.992 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:13.128 -08 000000077 INF: Y Motor: Unshifted Position: 5948945
17-02-28 20:20:13.128 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:13.128 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:13.190 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:20:13.190 -08 000000077 INF: Y Motor: Moved to 64.4895 after 2369 ms
17-02-28 20:20:13.190 -08 000000077 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:13.256 -08 000000077 INF: Y Motor: Recv v 4096\r
17-02-28 20:20:13.256 -08 000000077 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:13.256 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:13.330 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:20:13.330 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:13.330 -08 000000077 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:13.377 -08 000000077 INF: Y Motor: Recv v 402653184\r
17-02-28 20:20:13.377 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:20:13.377 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:13.377 -08 000000077 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:13.442 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:20:13.442 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:13.442 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:13.442 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:13.502 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:20:13.502 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:13.502 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:13.567 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:20:13.567 -08 000000077 INF: ======================================
17-02-28 20:20:13.568 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:20:13.570 -08 000000069 INF: ======================================
17-02-28 20:20:13.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:13.572 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:13.572 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:20:13.572 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:20:13.628 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:13.628 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:20:13.642 -08 000000090 INF: FPGA: Recv ZFREQCL
17-02-28 20:20:13.642 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:20:13.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:13.643 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:13.703 -08 000000105 INF: FPGA: Recv TDIYERD 6448945
17-02-28 20:20:13.703 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448945 counts (64.489 mm)
17-02-28 20:20:13.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:13.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:13.705 -08 000000073 INF: ===================Set YMotor gains for scans===================
17-02-28 20:20:13.705 -08 000000064 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:13.705 -08 000000073 INF: ======================================
17-02-28 20:20:13.706 -08 000000064 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:13.707 -08 000000064 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:20:13.707 -08 000000064 INF: FPGA: Xmit TDIYPOS 6338018\n
17-02-28 20:20:13.765 -08 000000051 INF: FPGA: Recv TDIYPOS
17-02-28 20:20:13.765 -08 000000064 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:13.767 -08 000000064 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:20:13.767 -08 000000064 INF: FPGA: Xmit TDIYARM3 139264 6428943 1 1\n
17-02-28 20:20:13.831 -08 000000073 INF: FPGA: Recv TDIYARM3
17-02-28 20:20:13.832 -08 000000064 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:13.833 -08 000000064 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:13.834 -08 000000064 INF: ======================================
17-02-28 20:20:13.835 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:13.836 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:13.836 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:13.837 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:13.837 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:13.838 -08 000000058 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:20:13.838 -08 000000058 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:20:13.838 -08 000000058 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:20:13.838 -08 000000058 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:20:13.839 -08 000000058 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:20:13.839 -08 000000066 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:20:13.839 -08 000000066 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:20:13.839 -08 000000066 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:20:13.839 -08 000000066 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:20:13.840 -08 000000066 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:20:14.203 -08 000000073 INF: FPGA: Recv EX2MV
17-02-28 20:20:14.203 -08 000000073 INF: FPGA: Recv EX1MV
17-02-28 20:20:14.203 -08 000000066 INF: Excitation Filter 1: Moved -107 steps in 363.6737 ms
17-02-28 20:20:14.203 -08 000000066 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 363.9152 ms
17-02-28 20:20:14.203 -08 000000066 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 363.9874 ms
17-02-28 20:20:14.203 -08 000000058 INF: Excitation Filter 2: Moved -107 steps in 364.5208 ms
17-02-28 20:20:14.203 -08 000000058 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 364.95 ms
17-02-28 20:20:14.203 -08 000000058 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.0298 ms
17-02-28 20:20:14.204 -08 000000066 INF: ======================================
17-02-28 20:20:14.204 -08 000000058 INF: ======================================
17-02-28 20:20:14.205 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:14.206 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:14.207 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:14.207 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:20:14.207 -08 000000045 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:14.207 -08 000000045 INF: Y Motor: Moving to 14.8411 mm @6.500 mm/sec, started at 64.4895 mm
17-02-28 20:20:14.208 -08 000000033 INF: ===================FPGA Z Wait===================
17-02-28 20:20:14.208 -08 000000045 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:14.208 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:14.208 -08 000000033 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:20:14.208 -08 000000064 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:20:14.208 -08 000000075 INF: ===================Camera TDI, Parallel===================
17-02-28 20:20:14.209 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:20:14.209 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:20:14.211 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:14.211 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:14.211 -08 000000064 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:20:14.211 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:14.211 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:14.251 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:20:14.251 -08 000000045 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:14.251 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:14.313 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:20:14.313 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:14.361 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:14.361 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:14.361 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:14.361 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:14.376 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:20:14.376 -08 000000045 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:14.376 -08 000000045 INF: Y Motor: Set target position to 984109 encoder counts
17-02-28 20:20:14.376 -08 000000045 INF: Y Motor: Xmit s r0xca 984109\r
17-02-28 20:20:14.440 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:20:14.440 -08 000000045 INF: Y Motor: Start the move command
17-02-28 20:20:14.440 -08 000000045 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:14.501 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:20:14.501 -08 000000045 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:20:14.501 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:14.511 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:14.511 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:14.511 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:14.511 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:14.579 -08 000000109 INF: FPGA: Recv ZWAIT 
17-02-28 20:20:14.579 -08 000000033 INF: ======================================
17-02-28 20:20:14.627 -08 000000045 INF: Y Motor: Unshifted Position: 5886654
17-02-28 20:20:14.661 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:14.661 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:14.661 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:14.661 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:14.661 -08 000000053 INF: ===================Camera #2 Frame #5===================
17-02-28 20:20:14.661 -08 000000047 INF: ===================Camera #0 Frame #5===================
17-02-28 20:20:14.677 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:14.801 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:14.831 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:20:14.831 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:20:14.831 -08 000000047 INF: ===================Camera #0 Frame #11===================
17-02-28 20:20:14.835 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:20:14.835 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:20:14.835 -08 000000053 INF: ===================Camera #2 Frame #12===================
17-02-28 20:20:14.938 -08 000000045 INF: Y Motor: Unshifted Position: 5684293
17-02-28 20:20:14.988 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:15.009 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:20:15.009 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:20:15.009 -08 000000047 INF: ===================Camera #0 Frame #18===================
17-02-28 20:20:15.018 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:20:15.018 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:20:15.018 -08 000000053 INF: ===================Camera #2 Frame #18===================
17-02-28 20:20:15.114 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:15.186 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:20:15.186 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:20:15.186 -08 000000047 INF: ===================Camera #0 Frame #24===================
17-02-28 20:20:15.187 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:20:15.187 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:20:15.187 -08 000000053 INF: ===================Camera #2 Frame #24===================
17-02-28 20:20:15.249 -08 000000045 INF: Y Motor: Unshifted Position: 5482147
17-02-28 20:20:15.299 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:15.356 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:20:15.356 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:20:15.356 -08 000000053 INF: ===================Camera #2 Frame #31===================
17-02-28 20:20:15.363 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:20:15.363 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:20:15.363 -08 000000047 INF: ===================Camera #0 Frame #31===================
17-02-28 20:20:15.425 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:15.533 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:20:15.533 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:20:15.533 -08 000000053 INF: ===================Camera #2 Frame #37===================
17-02-28 20:20:15.541 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:20:15.541 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 38
17-02-28 20:20:15.541 -08 000000047 INF: ===================Camera #0 Frame #38===================
17-02-28 20:20:15.561 -08 000000045 INF: Y Motor: Unshifted Position: 5279124
17-02-28 20:20:15.611 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:15.711 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:20:15.711 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:20:15.711 -08 000000053 INF: ===================Camera #2 Frame #44===================
17-02-28 20:20:15.722 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:20:15.722 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:20:15.722 -08 000000047 INF: ===================Camera #0 Frame #44===================
17-02-28 20:20:15.737 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:15.875 -08 000000045 INF: Y Motor: Unshifted Position: 5074805
17-02-28 20:20:15.885 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:20:15.885 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:20:15.885 -08 000000053 INF: ===================Camera #2 Frame #50===================
17-02-28 20:20:15.898 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51.
17-02-28 20:20:15.898 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51
17-02-28 20:20:15.898 -08 000000047 INF: ===================Camera #0 Frame #51===================
17-02-28 20:20:15.925 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.048 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.058 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:20:16.058 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:20:16.058 -08 000000053 INF: ===================Camera #2 Frame #57===================
17-02-28 20:20:16.080 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:20:16.080 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:20:16.080 -08 000000047 INF: ===================Camera #0 Frame #57===================
17-02-28 20:20:16.186 -08 000000045 INF: Y Motor: Unshifted Position: 4872659
17-02-28 20:20:16.230 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:20:16.230 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:20:16.230 -08 000000053 INF: ===================Camera #2 Frame #63===================
17-02-28 20:20:16.236 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.249 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64.
17-02-28 20:20:16.249 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64
17-02-28 20:20:16.249 -08 000000047 INF: ===================Camera #0 Frame #64===================
17-02-28 20:20:16.363 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.410 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:20:16.410 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:20:16.410 -08 000000053 INF: ===================Camera #2 Frame #69===================
17-02-28 20:20:16.426 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:20:16.426 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:20:16.426 -08 000000047 INF: ===================Camera #0 Frame #70===================
17-02-28 20:20:16.498 -08 000000045 INF: Y Motor: Unshifted Position: 4670297
17-02-28 20:20:16.548 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.588 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:20:16.588 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:20:16.588 -08 000000053 INF: ===================Camera #2 Frame #76===================
17-02-28 20:20:16.603 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:20:16.603 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:20:16.603 -08 000000047 INF: ===================Camera #0 Frame #77===================
17-02-28 20:20:16.675 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.771 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:20:16.771 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:20:16.771 -08 000000053 INF: ===================Camera #2 Frame #83===================
17-02-28 20:20:16.785 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:20:16.785 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:20:16.785 -08 000000047 INF: ===================Camera #0 Frame #83===================
17-02-28 20:20:16.810 -08 000000045 INF: Y Motor: Unshifted Position: 4466826
17-02-28 20:20:16.860 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.944 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:20:16.944 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:20:16.944 -08 000000053 INF: ===================Camera #2 Frame #89===================
17-02-28 20:20:16.960 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90.
17-02-28 20:20:16.960 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90
17-02-28 20:20:16.960 -08 000000047 INF: ===================Camera #0 Frame #90===================
17-02-28 20:20:16.986 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.113 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:20:17.113 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:20:17.113 -08 000000053 INF: ===================Camera #2 Frame #95===================
17-02-28 20:20:17.124 -08 000000045 INF: Y Motor: Unshifted Position: 4263168
17-02-28 20:20:17.132 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:20:17.132 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:20:17.132 -08 000000047 INF: ===================Camera #0 Frame #96===================
17-02-28 20:20:17.174 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.283 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:20:17.283 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:20:17.283 -08 000000053 INF: ===================Camera #2 Frame #102===================
17-02-28 20:20:17.297 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.307 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:20:17.307 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:20:17.307 -08 000000047 INF: ===================Camera #0 Frame #102===================
17-02-28 20:20:17.434 -08 000000045 INF: Y Motor: Unshifted Position: 4061656
17-02-28 20:20:17.456 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:20:17.456 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:20:17.456 -08 000000053 INF: ===================Camera #2 Frame #108===================
17-02-28 20:20:17.475 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109.
17-02-28 20:20:17.475 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109
17-02-28 20:20:17.475 -08 000000047 INF: ===================Camera #0 Frame #109===================
17-02-28 20:20:17.484 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.609 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.625 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:20:17.625 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:20:17.625 -08 000000053 INF: ===================Camera #2 Frame #114===================
17-02-28 20:20:17.647 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:20:17.647 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:20:17.647 -08 000000047 INF: ===================Camera #0 Frame #115===================
17-02-28 20:20:17.747 -08 000000045 INF: Y Motor: Unshifted Position: 3857994
17-02-28 20:20:17.794 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:20:17.794 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:20:17.794 -08 000000053 INF: ===================Camera #2 Frame #120===================
17-02-28 20:20:17.797 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.815 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:20:17.815 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:20:17.815 -08 000000047 INF: ===================Camera #0 Frame #121===================
17-02-28 20:20:17.923 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.964 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:20:17.964 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:20:17.964 -08 000000053 INF: ===================Camera #2 Frame #127===================
17-02-28 20:20:17.984 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:20:17.984 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:20:17.984 -08 000000047 INF: ===================Camera #0 Frame #127===================
17-02-28 20:20:18.058 -08 000000045 INF: Y Motor: Unshifted Position: 3654544
17-02-28 20:20:18.108 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:18.136 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:20:18.136 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:20:18.136 -08 000000053 INF: ===================Camera #2 Frame #133===================
17-02-28 20:20:18.152 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134.
17-02-28 20:20:18.152 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134
17-02-28 20:20:18.152 -08 000000047 INF: ===================Camera #0 Frame #134===================
17-02-28 20:20:18.234 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:18.305 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:20:18.305 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:20:18.305 -08 000000053 INF: ===================Camera #2 Frame #139===================
17-02-28 20:20:18.324 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:20:18.324 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:20:18.324 -08 000000047 INF: ===================Camera #0 Frame #140===================
17-02-28 20:20:18.372 -08 000000045 INF: Y Motor: Unshifted Position: 3451520
17-02-28 20:20:18.422 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:18.474 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:20:18.474 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:20:18.474 -08 000000053 INF: ===================Camera #2 Frame #145===================
17-02-28 20:20:18.492 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:20:18.492 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:20:18.492 -08 000000047 INF: ===================Camera #0 Frame #146===================
17-02-28 20:20:18.545 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:18.643 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:20:18.643 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:20:18.643 -08 000000053 INF: ===================Camera #2 Frame #152===================
17-02-28 20:20:18.660 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:20:18.660 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:20:18.660 -08 000000047 INF: ===================Camera #0 Frame #152===================
17-02-28 20:20:18.683 -08 000000045 INF: Y Motor: Unshifted Position: 3249378
17-02-28 20:20:18.733 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:18.815 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:20:18.815 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:20:18.815 -08 000000053 INF: ===================Camera #2 Frame #158===================
17-02-28 20:20:18.828 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:20:18.828 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:20:18.828 -08 000000047 INF: ===================Camera #0 Frame #158===================
17-02-28 20:20:18.859 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:18.986 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:20:18.986 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:20:18.986 -08 000000053 INF: ===================Camera #2 Frame #164===================
17-02-28 20:20:18.994 -08 000000045 INF: Y Motor: Unshifted Position: 3047018
17-02-28 20:20:18.997 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:20:18.997 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:20:18.997 -08 000000047 INF: ===================Camera #0 Frame #165===================
17-02-28 20:20:19.044 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:19.155 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:20:19.155 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:20:19.155 -08 000000053 INF: ===================Camera #2 Frame #171===================
17-02-28 20:20:19.168 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:20:19.168 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:20:19.168 -08 000000047 INF: ===================Camera #0 Frame #171===================
17-02-28 20:20:19.170 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:19.308 -08 000000045 INF: Y Motor: Unshifted Position: 2842922
17-02-28 20:20:19.327 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:20:19.327 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:20:19.327 -08 000000053 INF: ===================Camera #2 Frame #177===================
17-02-28 20:20:19.336 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:20:19.336 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:20:19.336 -08 000000047 INF: ===================Camera #0 Frame #177===================
17-02-28 20:20:19.358 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:19.481 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:19.496 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:20:19.496 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:20:19.496 -08 000000053 INF: ===================Camera #2 Frame #183===================
17-02-28 20:20:19.504 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:20:19.504 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:20:19.504 -08 000000047 INF: ===================Camera #0 Frame #183===================
17-02-28 20:20:19.618 -08 000000045 INF: Y Motor: Unshifted Position: 2641207
17-02-28 20:20:19.665 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:20:19.665 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:20:19.665 -08 000000053 INF: ===================Camera #2 Frame #189===================
17-02-28 20:20:19.668 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:19.672 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:20:19.672 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:20:19.672 -08 000000047 INF: ===================Camera #0 Frame #190===================
17-02-28 20:20:19.794 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:19.834 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:20:19.834 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:20:19.834 -08 000000053 INF: ===================Camera #2 Frame #196===================
17-02-28 20:20:19.843 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:20:19.843 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:20:19.843 -08 000000047 INF: ===================Camera #0 Frame #196===================
17-02-28 20:20:19.932 -08 000000045 INF: Y Motor: Unshifted Position: 2437118
17-02-28 20:20:19.982 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:20.006 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:20:20.006 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:20:20.006 -08 000000053 INF: ===================Camera #2 Frame #202===================
17-02-28 20:20:20.011 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:20:20.011 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:20:20.011 -08 000000047 INF: ===================Camera #0 Frame #202===================
17-02-28 20:20:20.105 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:20.175 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:20:20.175 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:20:20.175 -08 000000053 INF: ===================Camera #2 Frame #208===================
17-02-28 20:20:20.179 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:20:20.179 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:20:20.179 -08 000000047 INF: ===================Camera #0 Frame #208===================
17-02-28 20:20:20.243 -08 000000045 INF: Y Motor: Unshifted Position: 2234743
17-02-28 20:20:20.293 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:20.344 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:20:20.344 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:20:20.344 -08 000000053 INF: ===================Camera #2 Frame #214===================
17-02-28 20:20:20.347 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:20:20.347 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:20:20.347 -08 000000047 INF: ===================Camera #0 Frame #214===================
17-02-28 20:20:20.419 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:20.513 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:20:20.513 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:20:20.513 -08 000000053 INF: ===================Camera #2 Frame #221===================
17-02-28 20:20:20.515 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:20:20.515 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:20:20.515 -08 000000047 INF: ===================Camera #0 Frame #221===================
17-02-28 20:20:20.554 -08 000000045 INF: Y Motor: Unshifted Position: 2032592
17-02-28 20:20:20.604 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:20.685 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:20:20.685 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:20:20.685 -08 000000053 INF: ===================Camera #2 Frame #227===================
17-02-28 20:20:20.686 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:20:20.686 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:20:20.686 -08 000000047 INF: ===================Camera #0 Frame #227===================
17-02-28 20:20:20.731 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:20.854 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:20:20.854 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:20:20.854 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:20:20.854 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:20:20.854 -08 000000047 INF: ===================Camera #0 Frame #233===================
17-02-28 20:20:20.854 -08 000000053 INF: ===================Camera #2 Frame #233===================
17-02-28 20:20:20.866 -08 000000045 INF: Y Motor: Unshifted Position: 1829571
17-02-28 20:20:20.916 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.023 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:20:21.023 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:20:21.023 -08 000000047 INF: ===================Camera #0 Frame #239===================
17-02-28 20:20:21.024 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:20:21.024 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:20:21.024 -08 000000053 INF: ===================Camera #2 Frame #239===================
17-02-28 20:20:21.042 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.132 -08 000000045 INF: Y Motor: Unshifted Position: 1648223
17-02-28 20:20:21.182 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.191 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:20:21.191 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:20:21.191 -08 000000047 INF: ===================Camera #0 Frame #245===================
17-02-28 20:20:21.193 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:20:21.193 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:20:21.193 -08 000000053 INF: ===================Camera #2 Frame #246===================
17-02-28 20:20:21.308 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.359 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:20:21.359 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:20:21.359 -08 000000047 INF: ===================Camera #0 Frame #252===================
17-02-28 20:20:21.365 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:20:21.365 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:20:21.365 -08 000000053 INF: ===================Camera #2 Frame #252===================
17-02-28 20:20:21.443 -08 000000045 INF: Y Motor: Unshifted Position: 1454293
17-02-28 20:20:21.493 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.530 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:20:21.530 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:20:21.530 -08 000000047 INF: ===================Camera #0 Frame #258===================
17-02-28 20:20:21.534 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:20:21.534 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:20:21.534 -08 000000053 INF: ===================Camera #2 Frame #258===================
17-02-28 20:20:21.620 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.699 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:20:21.699 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:20:21.699 -08 000000047 INF: ===================Camera #0 Frame #264===================
17-02-28 20:20:21.704 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:20:21.704 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:20:21.704 -08 000000053 INF: ===================Camera #2 Frame #264===================
17-02-28 20:20:21.755 -08 000000045 INF: Y Motor: Unshifted Position: 1251500
17-02-28 20:20:21.805 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.868 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:20:21.868 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:20:21.868 -08 000000047 INF: ===================Camera #0 Frame #270===================
17-02-28 20:20:21.874 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:20:21.874 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:20:21.874 -08 000000053 INF: ===================Camera #2 Frame #271===================
17-02-28 20:20:21.931 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.956 -08 000000050 INF: FPGA: Recv TDIYWAIT
17-02-28 20:20:21.956 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:21.958 -08 000000064 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:20:21.959 -08 000000108 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:20:21.959 -08 000000109 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:20:21.959 -08 000000108 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:20:21.959 -08 000000108 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:20:21.959 -08 000000108 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:20:21.959 -08 000000109 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:20:21.959 -08 000000108 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:20:21.959 -08 000000109 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:20:21.959 -08 000000109 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:20:21.960 -08 000000109 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:20:22.037 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:22.037 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:22.037 -08 000000047 INF: ===================Camera #0 Frame #272===================
17-02-28 20:20:22.044 -08 000000047 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:22.045 -08 000000047 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:22.072 -08 000000045 INF: Y Motor: Unshifted Position: 1047396
17-02-28 20:20:22.122 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:22.177 -08 000000047 INF: Camera #0 ReleaseBuffer
17-02-28 20:20:22.177 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:22.177 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:22.177 -08 000000053 INF: ===================Camera #2 Frame #272===================
17-02-28 20:20:22.177 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:20:22.180 -08 000000053 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:22.181 -08 000000053 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:22.208 -08 000000047 INF: ======================================
17-02-28 20:20:22.242 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:22.331 -08 000000039 INF: FPGA: Recv EX1MV
17-02-28 20:20:22.331 -08 000000039 INF: FPGA: Recv EX2MV
17-02-28 20:20:22.331 -08 000000109 INF: Excitation Filter 2: Moved 107 steps in 371.7185 ms
17-02-28 20:20:22.331 -08 000000108 INF: Excitation Filter 1: Moved 107 steps in 371.9067 ms
17-02-28 20:20:22.331 -08 000000109 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8686 ms
17-02-28 20:20:22.331 -08 000000109 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.9812 ms
17-02-28 20:20:22.331 -08 000000108 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.9994 ms
17-02-28 20:20:22.331 -08 000000108 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.1686 ms
17-02-28 20:20:22.331 -08 000000109 INF: ======================================
17-02-28 20:20:22.331 -08 000000108 INF: ======================================
17-02-28 20:20:22.333 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:22.334 -08 000000064 INF: ======================================
17-02-28 20:20:22.352 -08 000000053 INF: Camera #2 ReleaseBuffer
17-02-28 20:20:22.352 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:20:22.380 -08 000000045 INF: Y Motor: Unshifted Position: 984109
17-02-28 20:20:22.380 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:22.380 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:22.387 -08 000000053 INF: ======================================
17-02-28 20:20:22.389 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:20:22.390 -08 000000075 INF: ======================================
17-02-28 20:20:22.444 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:20:22.444 -08 000000045 INF: Y Motor: Moved to 14.8411 after 7942 ms
17-02-28 20:20:22.444 -08 000000045 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:22.506 -08 000000045 INF: Y Motor: Recv v 4097\r
17-02-28 20:20:22.506 -08 000000045 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:22.506 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:22.567 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:20:22.567 -08 000000045 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:22.567 -08 000000045 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:22.629 -08 000000045 INF: Y Motor: Recv v 134217728\r
17-02-28 20:20:22.629 -08 000000045 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:20:22.629 -08 000000045 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:22.629 -08 000000045 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:22.691 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:20:22.691 -08 000000045 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:22.691 -08 000000045 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:22.691 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:22.755 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:20:22.755 -08 000000045 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:22.755 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:22.817 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:20:22.817 -08 000000045 INF: ======================================
17-02-28 20:20:22.818 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:22.819 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:22.820 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:22.820 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:20:22.892 -08 000000057 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:20:22.892 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:22.956 -08 000000039 INF: FPGA: Recv TDIYERD 1484110
17-02-28 20:20:22.956 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:20:23.018 -08 000000050 INF: FPGA: Recv ZADCR 18496
17-02-28 20:20:23.018 -08 000000018 INF: At scan end Y pos = 14.841 and Z pos = -0.071. Y moved -48.539 mm
17-02-28 20:20:23.018 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:20:23.079 -08 000000057 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:20:23.079 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:20:23.079 -08 000000018 INF: TDIScan finished after 12608.0035 ms
17-02-28 20:20:23.079 -08 000000018 INF: Image[0]: Y should trigger at 63.380 mm, 2nd row was at 64.289 mm (error = 0.909 mm)
17-02-28 20:20:23.079 -08 000000018 INF: Image[2]: Y should trigger at 63.380 mm, 2nd row was at 64.289 mm (error = 0.909 mm)
17-02-28 20:20:23.081 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.116 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.749 um
17-02-28 20:20:23.116 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.117 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:20:23.144 -08 000000082 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:20:23.145 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.145 -08 000000069 INF: ===================Dither Clean Up Command===================
17-02-28 20:20:23.145 -08 000000108 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:20:23.145 -08 000000073 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:20:23.145 -08 000000077 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:20:23.146 -08 000000073 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:23.146 -08 000000073 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:23.146 -08 000000077 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:20:23.146 -08 000000077 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:20:23.146 -08 000000108 INF: ======================================
17-02-28 20:20:23.146 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:23.146 -08 000000109 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:23.147 -08 000000058 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:20:23.150 -08 000000109 INF: ===================LFT:Extracting coords===================
17-02-28 20:20:23.179 -08 000000109 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:23.179 -08 000000109 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:20:23.180 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.181 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.181 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.181 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.181 -08 000000064 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:23.181 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:23.181 -08 000000060 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:23.181 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:23.192 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:20:23.192 -08 000000073 INF: ======================================
17-02-28 20:20:23.206 -08 000000086 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:23.206 -08 000000086 INF: FPGA: Recv ZSEL 
17-02-28 20:20:23.206 -08 000000058 INF: FPGA: Xmit ZDACW 18956\n
17-02-28 20:20:23.206 -08 000000077 INF: ======================================
17-02-28 20:20:23.255 -08 000000064 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:23.255 -08 000000033 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:23.255 -08 000000060 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:23.255 -08 000000052 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:23.267 -08 000000085 INF: FPGA: Recv ZDACW 
17-02-28 20:20:23.267 -08 000000058 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:20:23.268 -08 000000058 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:20:23.329 -08 000000053 INF: FPGA: Recv TDIBB
17-02-28 20:20:23.329 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:23.330 -08 000000058 INF: ======================================
17-02-28 20:20:23.406 -08 000000064 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:20:23.406 -08 000000064 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0517739436525566 in the next cycle, cycle 4 FC:A, C:3,L:6,B
17-02-28 20:20:23.406 -08 000000033 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:20:23.406 -08 000000033 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0517739436525566 in the next cycle, cycle 4 FC:A, C:3,L:6,B
17-02-28 20:20:23.406 -08 000000060 INF: LFT found best fwhm score 2.000144 in 151 ms
17-02-28 20:20:23.406 -08 000000060 INF: LFT found good score at index 4633 with fwhm value 2.000144. Next cycle, cycle 4 starting Z position for bottom surface is at -0.052 mm FC:A, C:3,L:6,B
17-02-28 20:20:23.406 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.406 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.407 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.407 -08 000000052 INF: LFT found best fwhm score 2.000238 in 152 ms
17-02-28 20:20:23.407 -08 000000052 INF: LFT found good score at index 1733 with fwhm value 2.000238. Next cycle, cycle 4 starting Z position for bottom surface is at -0.052 mm FC:A, C:3,L:6,B
17-02-28 20:20:23.407 -08 000000064 INF: ======================================
17-02-28 20:20:23.407 -08 000000033 INF: ======================================
17-02-28 20:20:23.407 -08 000000060 INF: ======================================
17-02-28 20:20:23.407 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.407 -08 000000052 INF: ======================================
17-02-28 20:20:23.408 -08 000000109 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:23.409 -08 000000109 INF: LFT weighted average best Z for bottom surface is at -0.052mm FC:A, C:3,L:6,B
17-02-28 20:20:23.409 -08 000000109 INF: ======================================
17-02-28 20:20:23.411 -08 000000069 INF: ======================================
17-02-28 20:20:23.412 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.413 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:20:23.413 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.413 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:20:23.413 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.413 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:20:23.413 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.414 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:20:23.414 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.414 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494===================
17-02-28 20:20:23.414 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494===================
17-02-28 20:20:23.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:20:23.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494===================
17-02-28 20:20:23.415 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:20:23.415 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:20:23.438 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:20:23.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:20:23.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:20:23.439 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:23.439 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:20:23.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:20:23.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:20:23.457 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.459 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.459 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:23.459 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:23.474 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:20:23.475 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:20:23.476 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:23.477 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:23.477 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:23.477 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:23.483 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":6,"Tile":2204,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF199","HCSMMF211","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.522 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:23.523 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Selecting Reagent HSM (3)===================
17-02-28 20:20:23.523 -08 000000042 INF: Valve B1: Go to position 3
17-02-28 20:20:23.523 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:20:23.526 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:23.526 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.527 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:20:23.527 -08 000000018 INF: Lane 7, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:20:23.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.529 -08 000000086 INF: ===================Move Tilt Motor 1===================
17-02-28 20:20:23.529 -08 000000086 INF: ======================================
17-02-28 20:20:23.530 -08 000000086 INF: ===================Move Tilt Motor 2===================
17-02-28 20:20:23.531 -08 000000086 INF: ======================================
17-02-28 20:20:23.545 -08 000000090 INF: ===================Move Tilt Motor 3===================
17-02-28 20:20:23.545 -08 000000090 INF: ======================================
17-02-28 20:20:23.546 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.547 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":6,"Tile":2203,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF227","HCSMMF258","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.547 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.556 -08 000000018 INF: Transformed XStagePosition from 22.72893 mm to 22.728931427002 mm.
17-02-28 20:20:23.567 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:20:23.567 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:20:23.567 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:20:23.567 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:23.568 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:23.573 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":6,"Tile":2206,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF228","HCSMMF284","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.575 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:20:23.575 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:20:23.575 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:20:23.586 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 8\r
17-02-28 20:20:23.586 -08 000000042 INF: Valve B1: 233.629 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:20:23.586 -08 000000042 INF: Valve B1: Taking shortest path 'CW' from 8 to 3
17-02-28 20:20:23.586 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CW3\r
17-02-28 20:20:23.587 -08 000000042 INF: SerialPort B1 (VICIB1): Recv  (discarded)
17-02-28 20:20:23.587 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:20:23.617 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":6,"Tile":2208,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF204","HCSMMF189","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.689 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":6,"Tile":2205,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF280","HCSMMF239","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.689 -08 000000057 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:23.692 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:23.692 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:20:23.692 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0723 mm
17-02-28 20:20:23.693 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:20:23.699 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":6,"Tile":2210,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF205","HCSMMF193","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.701 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":6,"Tile":2209,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF287","HCSMMF207","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.702 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":6,"Tile":2212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF178","HCSMMF179","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.703 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":6,"Tile":2202,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF259","HCSMMF225","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.704 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":6,"Tile":2207,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF274","HCSMMF203","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.705 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":6,"Tile":2201,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF223","HCSMMF256","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.706 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":6,"Tile":2216,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF282","HCSMMF251","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.707 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":6,"Tile":2213,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF264","HCSMMF253","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.707 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":6,"Tile":2215,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF231","HCSMMF181","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.708 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":6,"Tile":2211,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF246","HCSMMF187","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.709 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":6,"Tile":2214,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF245","HCSMMF192","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.710 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":6,"Tile":2220,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF222","HCSMMF286","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.711 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":6,"Tile":2224,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF236","HCSMMF252","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.712 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":6,"Tile":2223,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF209","HCSMMF229","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.713 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":6,"Tile":2217,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF241","HCSMMF183","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.713 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":6,"Tile":2228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF201","HCSMMF230","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.715 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":6,"Tile":2222,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF268","HCSMMF249","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.717 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":6,"Tile":2218,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF281","HCSMMF242","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.718 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":6,"Tile":2225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF190","HCSMMF180","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.719 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":6,"Tile":2221,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF176","HCSMMF206","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.721 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":6,"Tile":2219,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF217","HCSMMF195","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.722 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":6,"Tile":2226,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF266","HCSMMF221","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.723 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":6,"Tile":2227,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF218","HCSMMF257","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.751 -08 000000053 INF: FPGA: Recv ZTRG 
17-02-28 20:20:23.751 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:20:23.813 -08 000000057 INF: FPGA: Recv ZYT 
17-02-28 20:20:23.813 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:20:23.813 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:20:23.856 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:23.862 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:20:23.875 -08 000000058 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:20:23.875 -08 000000058 INF: FPGA: Recv ZMV 
17-02-28 20:20:23.875 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:20:23.875 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.915 ms
17-02-28 20:20:23.875 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:20:23.937 -08 000000108 INF: FPGA: Recv ZDACR 60292
17-02-28 20:20:23.937 -08 000000018 INF: Z Motor: MoveAndTrigger took 244.575 ms w/comms
17-02-28 20:20:23.937 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:20:23.937 -08 000000018 INF: Z Motor: MoveAbsStepped took 244.7761 ms
17-02-28 20:20:23.938 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:23.938 -08 000000018 INF: Transformed XStagePosition from 22.72893 mm to 22.728931427002 mm.
17-02-28 20:20:23.947 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:20:23.947 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:23.947 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:23.947 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:20:23.947 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:20:23.961 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:23.961 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:20:24.000 -08 000000010 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:24.006 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:24.012 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:20:24.020 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:24.020 -08 000000018 INF: Transformed XStagePosition from 22.72893 mm to 22.728931427002 mm.
17-02-28 20:20:24.029 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:20:24.029 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:24.029 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:24.031 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:24.031 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:20:24.031 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:24.031 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = G_1
17-02-28 20:20:24.032 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:24.032 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:24.033 -08 000000109 INF: ===================MoveEmissionFilters===================
17-02-28 20:20:24.033 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:20:24.034 -08 000000035 INF: ===================Move X,Y, Parallel===================
17-02-28 20:20:24.034 -08 000000051 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:24.034 -08 000000075 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:24.034 -08 000000108 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:24.034 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:24.035 -08 000000066 INF: ===================Move X Motor without settling===================
17-02-28 20:20:24.035 -08 000000047 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:24.035 -08 000000051 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:24.035 -08 000000075 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:24.035 -08 000000108 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:24.035 -08 000000047 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8411 mm
17-02-28 20:20:24.035 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:24.035 -08 000000066 INF: X Motor: Xmit PR VM\n
17-02-28 20:20:24.036 -08 000000047 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:24.036 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:24.036 -08 000000045 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:20:24.036 -08 000000073 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:20:24.036 -08 000000038 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:20:24.036 -08 000000085 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:20:24.036 -08 000000064 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:20:24.036 -08 000000039 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:20:24.037 -08 000000085 INF: ======================================
17-02-28 20:20:24.037 -08 000000039 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:20:24.037 -08 000000073 INF: ======================================
17-02-28 20:20:24.037 -08 000000082 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:20:24.037 -08 000000101 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:20:24.037 -08 000000039 INF: ======================================
17-02-28 20:20:24.038 -08 000000101 INF: ======================================
17-02-28 20:20:24.038 -08 000000082 INF: ======================================
17-02-28 20:20:24.038 -08 000000108 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:24.039 -08 000000051 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:24.040 -08 000000045 INF: ======================================
17-02-28 20:20:24.040 -08 000000064 INF: ======================================
17-02-28 20:20:24.040 -08 000000108 INF: ======================================
17-02-28 20:20:24.040 -08 000000038 INF: ======================================
17-02-28 20:20:24.040 -08 000000051 INF: ======================================
17-02-28 20:20:24.041 -08 000000075 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:24.041 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:24.042 -08 000000075 INF: ======================================
17-02-28 20:20:24.042 -08 000000036 INF: ======================================
17-02-28 20:20:24.044 -08 000000109 INF: ======================================
17-02-28 20:20:24.068 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:20:24.068 -08 000000047 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:24.068 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:24.070 -08 000000066 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:20:24.070 -08 000000066 INF: X Motor: Xmit PR VI\n
17-02-28 20:20:24.105 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:24.111 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:20:24.126 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:20:24.126 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:24.126 -08 000000066 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:20:24.126 -08 000000066 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:20:24.126 -08 000000066 INF: X Motor: Moving to 22.7289 mm @15.000 mm/sec, started at 20.5259 mm
17-02-28 20:20:24.126 -08 000000066 INF: X Motor: Xmit MA -14857\n
17-02-28 20:20:24.190 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 3\r
17-02-28 20:20:24.190 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:24.190 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Opening shutoff valve===================
17-02-28 20:20:24.191 -08 000000066 INF: X Motor: Recv MA -14857\r\n>
17-02-28 20:20:24.191 -08 000000066 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:20:24.193 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:20:24.193 -08 000000047 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:24.193 -08 000000047 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:20:24.193 -08 000000047 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:20:24.203 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:24.209 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:20:24.255 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:20:24.255 -08 000000047 INF: Y Motor: Start the move command
17-02-28 20:20:24.255 -08 000000047 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:24.306 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:24.315 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:20:24.315 -08 000000047 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:20:24.315 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:24.439 -08 000000047 INF: Y Motor: Unshifted Position: 1056121
17-02-28 20:20:24.489 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:24.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:24.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:24.588 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:20:24.613 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:24.622 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:24.687 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:24.695 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 3, aspirate port PortB, aspiration rate 250, dispense rate 2000, volume 70, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=3, Children=0, Thread="Run", Parent="Prepare for scanning", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:20:24.750 -08 000000047 INF: Y Motor: Unshifted Position: 1749119
17-02-28 20:20:24.787 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:20:24.800 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:24.815 -08 000000066 INF: X Motor: Xmit PR ER\n
17-02-28 20:20:24.877 -08 000000066 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:20:24.877 -08 000000066 INF: X Motor: Moved to 22.7280 after 686 ms
17-02-28 20:20:24.877 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:20:24.877 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:20:24.877 -08 000000066 INF: ======================================
17-02-28 20:20:24.927 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:24.977 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:20:25.063 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:25.063 -08 000000047 INF: Y Motor: Unshifted Position: 2532444
17-02-28 20:20:25.113 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:25.163 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:25.237 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:25.250 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:25.374 -08 000000047 INF: Y Motor: Unshifted Position: 3319922
17-02-28 20:20:25.424 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:25.500 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:25.551 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:25.562 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:25.662 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:20:25.688 -08 000000047 INF: Y Motor: Unshifted Position: 4093301
17-02-28 20:20:25.738 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:25.749 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:25.849 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:25.862 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:25.935 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:25.935 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Aspirating port PortB===================
17-02-28 20:20:26.000 -08 000000047 INF: Y Motor: Unshifted Position: 4870718
17-02-28 20:20:26.035 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V800IP13440R\r
17-02-28 20:20:26.050 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:26.123 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:26.174 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:26.223 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:26.249 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:26.313 -08 000000047 INF: Y Motor: Unshifted Position: 5651338
17-02-28 20:20:26.363 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:26.495 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:26.500 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:26.563 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:26.623 -08 000000047 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:20:26.623 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:26.623 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:26.631 -08 000000089 INF: RunCopyService queue size at 2/28/2017 8:20:26 PM is 2
17-02-28 20:20:26.688 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:20:26.688 -08 000000047 INF: Y Motor: Moved to 64.4706 after 2372 ms
17-02-28 20:20:26.688 -08 000000047 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:26.751 -08 000000047 INF: Y Motor: Recv v 4096\r
17-02-28 20:20:26.751 -08 000000047 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:26.751 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:26.812 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:20:26.812 -08 000000047 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:26.812 -08 000000047 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:26.813 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:26.873 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:26.874 -08 000000047 INF: Y Motor: Recv v 402653184\r
17-02-28 20:20:26.874 -08 000000047 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:20:26.874 -08 000000047 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:26.874 -08 000000047 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:26.935 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:20:26.935 -08 000000047 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:26.935 -08 000000047 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:26.935 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:27.002 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:20:27.002 -08 000000047 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:27.002 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:27.061 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:20:27.061 -08 000000047 INF: ======================================
17-02-28 20:20:27.062 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:20:27.063 -08 000000035 INF: ======================================
17-02-28 20:20:27.064 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:27.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:27.066 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:20:27.066 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:20:27.123 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:27.124 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:27.124 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:20:27.188 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:27.188 -08 000000060 INF: FPGA: Recv ZFREQCL
17-02-28 20:20:27.189 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:20:27.189 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:27.189 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:27.245 -08 000000030 INF: FPGA: Recv TDIYERD 6447056
17-02-28 20:20:27.245 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447056 counts (64.471 mm)
17-02-28 20:20:27.246 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:27.246 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:27.247 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:20:27.247 -08 000000035 INF: ===================Set YMotor gains for scans===================
17-02-28 20:20:27.247 -08 000000035 INF: ======================================
17-02-28 20:20:27.248 -08 000000047 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:20:27.248 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:20:27.249 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:20:27.250 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:20:27.250 -08 000000047 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:20:27.310 -08 000000045 INF: FPGA: Recv TDIYPOS
17-02-28 20:20:27.311 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:20:27.312 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:20:27.312 -08 000000047 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:20:27.370 -08 000000030 INF: FPGA: Recv TDIYARM2
17-02-28 20:20:27.371 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:20:27.373 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:20:27.375 -08 000000047 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:20:27.375 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:20:27.378 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:20:27.379 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:20:27.380 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:27.438 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:27.496 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:27.746 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:27.753 -08 000000047 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:20:27.753 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:20:27.753 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:27.768 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:20:27.771 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:27.808 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:28.058 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:28.121 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:28.153 -08 000000047 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:20:28.153 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:20:28.153 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:28.168 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:20:28.171 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:20:28.173 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:20:28.175 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:28.176 -08 000000047 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:20:28.177 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:28.179 -08 000000047 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:20:28.179 -08 000000047 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:20:28.179 -08 000000047 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:20:28.179 -08 000000047 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:20:28.244 -08 000000085 INF: FPGA: Recv ZYT 
17-02-28 20:20:28.244 -08 000000047 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:20:28.244 -08 000000047 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:20:28.306 -08 000000030 INF: FPGA: Recv ZARM
17-02-28 20:20:28.306 -08 000000047 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.2312 ms
17-02-28 20:20:28.306 -08 000000047 INF: Z Motor: ArmAbsStepped took 126.8273 ms
17-02-28 20:20:28.307 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:28.309 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:20:28.311 -08 000000047 INF: ======================================
17-02-28 20:20:28.312 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:28.313 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:28.314 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:28.314 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:28.315 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:28.315 -08 000000066 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:20:28.316 -08 000000050 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:20:28.316 -08 000000066 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:20:28.316 -08 000000066 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:20:28.316 -08 000000066 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:20:28.316 -08 000000066 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:20:28.316 -08 000000050 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:20:28.316 -08 000000050 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:20:28.316 -08 000000050 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:20:28.317 -08 000000050 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:20:28.371 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:28.435 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:28.681 -08 000000033 INF: FPGA: Recv EX2MV
17-02-28 20:20:28.681 -08 000000033 INF: FPGA: Recv EX1MV
17-02-28 20:20:28.681 -08 000000050 INF: Excitation Filter 1: Moved -107 steps in 365.0949 ms
17-02-28 20:20:28.681 -08 000000066 INF: Excitation Filter 2: Moved -107 steps in 365.3062 ms
17-02-28 20:20:28.681 -08 000000050 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.2351 ms
17-02-28 20:20:28.681 -08 000000050 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.3875 ms
17-02-28 20:20:28.681 -08 000000066 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.4598 ms
17-02-28 20:20:28.681 -08 000000066 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.6309 ms
17-02-28 20:20:28.682 -08 000000050 INF: ======================================
17-02-28 20:20:28.682 -08 000000066 INF: ======================================
17-02-28 20:20:28.683 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:28.684 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:28.685 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:28.685 -08 000000064 INF: ===================Serial===================
17-02-28 20:20:28.685 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:20:28.685 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:28.685 -08 000000051 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:28.686 -08 000000051 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:20:28.686 -08 000000051 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:28.686 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:28.686 -08 000000064 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:20:28.686 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:20:28.686 -08 000000036 INF: ===================Camera TDI, Parallel===================
17-02-28 20:20:28.686 -08 000000047 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:20:28.687 -08 000000047 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:20:28.687 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:20:28.687 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:20:28.688 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:28.688 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:28.689 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:28.689 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:28.744 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:28.745 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:20:28.745 -08 000000051 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:28.745 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:28.807 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:20:28.807 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:28.838 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:28.838 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:28.839 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:28.839 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:28.869 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:20:28.869 -08 000000051 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:28.869 -08 000000051 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:20:28.869 -08 000000051 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:20:28.934 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:20:28.934 -08 000000051 INF: Y Motor: Start the move command
17-02-28 20:20:28.934 -08 000000051 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:28.988 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:28.988 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:28.989 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:28.989 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:28.994 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:28.997 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:20:28.997 -08 000000051 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:20:28.997 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.057 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:29.121 -08 000000051 INF: Y Motor: Unshifted Position: 5929034
17-02-28 20:20:29.138 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:29.138 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:29.139 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:29.139 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:29.171 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.288 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:20:29.288 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:20:29.288 -08 000000075 INF: ===================Camera #2 Frame #1===================
17-02-28 20:20:29.289 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:20:29.289 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:20:29.289 -08 000000010 INF: ===================Camera #0 Frame #1===================
17-02-28 20:20:29.294 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.307 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:29.370 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:29.433 -08 000000051 INF: Y Motor: Unshifted Position: 5882030
17-02-28 20:20:29.443 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:20:29.443 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:20:29.443 -08 000000075 INF: ===================Camera #2 Frame #3===================
17-02-28 20:20:29.444 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:20:29.444 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:20:29.444 -08 000000010 INF: ===================Camera #0 Frame #3===================
17-02-28 20:20:29.483 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.599 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:20:29.599 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:20:29.599 -08 000000075 INF: ===================Camera #2 Frame #4===================
17-02-28 20:20:29.603 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:20:29.603 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:20:29.603 -08 000000010 INF: ===================Camera #0 Frame #4===================
17-02-28 20:20:29.607 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.620 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:29.680 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:29.743 -08 000000051 INF: Y Motor: Unshifted Position: 5835525
17-02-28 20:20:29.754 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:29.754 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:29.754 -08 000000075 INF: ===================Camera #2 Frame #5===================
17-02-28 20:20:29.758 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:29.758 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:29.758 -08 000000010 INF: ===================Camera #0 Frame #5===================
17-02-28 20:20:29.793 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.806 -08 000000053 INF: FPGA: Recv ZWAIT 
17-02-28 20:20:29.806 -08 000000053 INF: FPGA: Recv TDIYWAIT
17-02-28 20:20:29.806 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:29.806 -08 000000064 INF: ===================Serial===================
17-02-28 20:20:29.808 -08 000000047 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:20:29.808 -08 000000064 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:20:29.808 -08 000000064 INF: ===================Serial===================
17-02-28 20:20:29.809 -08 000000078 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:20:29.809 -08 000000034 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:20:29.809 -08 000000078 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:20:29.809 -08 000000078 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:20:29.809 -08 000000078 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:20:29.809 -08 000000078 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:20:29.809 -08 000000034 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:20:29.809 -08 000000034 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:20:29.809 -08 000000034 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:20:29.809 -08 000000064 INF: ======================================
17-02-28 20:20:29.810 -08 000000034 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:20:29.908 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:20:29.908 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:20:29.908 -08 000000075 INF: ===================Camera #2 Frame #6===================
17-02-28 20:20:29.911 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:20:29.911 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:20:29.911 -08 000000010 INF: ===================Camera #0 Frame #6===================
17-02-28 20:20:29.911 -08 000000075 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:20:29.912 -08 000000075 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:29.914 -08 000000010 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:20:29.915 -08 000000010 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:29.920 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.930 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:29.937 -08 000000075 INF: Camera #2 ReleaseBuffer
17-02-28 20:20:29.937 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:20:29.938 -08 000000075 INF: ======================================
17-02-28 20:20:29.962 -08 000000010 INF: Camera #0 ReleaseBuffer
17-02-28 20:20:29.962 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:20:29.964 -08 000000010 INF: ======================================
17-02-28 20:20:29.966 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:20:29.967 -08 000000036 INF: ======================================
17-02-28 20:20:29.995 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:30.059 -08 000000051 INF: Y Motor: Unshifted Position: 5790761
17-02-28 20:20:30.109 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:30.179 -08 000000075 INF: FPGA: Recv EX1MV
17-02-28 20:20:30.179 -08 000000075 INF: FPGA: Recv EX2MV
17-02-28 20:20:30.179 -08 000000034 INF: Excitation Filter 2: Moved 107 steps in 369.8792 ms
17-02-28 20:20:30.179 -08 000000034 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.0461 ms
17-02-28 20:20:30.179 -08 000000034 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.1312 ms
17-02-28 20:20:30.179 -08 000000078 INF: Excitation Filter 1: Moved 107 steps in 370.0693 ms
17-02-28 20:20:30.179 -08 000000078 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.4723 ms
17-02-28 20:20:30.179 -08 000000078 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.5453 ms
17-02-28 20:20:30.180 -08 000000034 INF: ======================================
17-02-28 20:20:30.180 -08 000000078 INF: ======================================
17-02-28 20:20:30.181 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:30.182 -08 000000047 INF: ======================================
17-02-28 20:20:30.244 -08 000000051 INF: Y Motor: Unshifted Position: 5790746
17-02-28 20:20:30.244 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:30.244 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:30.245 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:30.305 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:30.306 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:20:30.306 -08 000000051 INF: Y Motor: Moved to 62.9075 after 1309 ms
17-02-28 20:20:30.306 -08 000000051 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:30.368 -08 000000051 INF: Y Motor: Recv v 4097\r
17-02-28 20:20:30.368 -08 000000051 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:30.368 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:30.430 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:20:30.430 -08 000000051 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:30.430 -08 000000051 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:30.493 -08 000000051 INF: Y Motor: Recv v 134217728\r
17-02-28 20:20:30.493 -08 000000051 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:20:30.493 -08 000000051 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:30.493 -08 000000051 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:30.554 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:20:30.554 -08 000000051 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:30.554 -08 000000051 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:30.554 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:30.555 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:30.619 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:30.620 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:20:30.620 -08 000000051 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:30.620 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:30.681 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:20:30.681 -08 000000051 INF: ======================================
17-02-28 20:20:30.682 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:30.683 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:30.684 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:30.684 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:20:30.739 -08 000000033 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:20:30.739 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:30.804 -08 000000025 INF: FPGA: Recv TDIYERD 6290744
17-02-28 20:20:30.804 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:20:30.864 -08 000000010 INF: FPGA: Recv ZADCR 2428
17-02-28 20:20:30.864 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:20:30.864 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:20:30.869 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:30.931 -08 000000077 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:20:30.931 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:20:30.931 -08 000000018 INF: TDIScan finished after 6910.1193 ms
17-02-28 20:20:30.931 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:20:30.931 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:20:30.931 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:20:30.932 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:30.989 -08 000000108 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:20:30.990 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:30.991 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:30.992 -08 000000090 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:20:30.992 -08 000000089 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:20:30.992 -08 000000090 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:30.992 -08 000000090 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:30.992 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:20:30.992 -08 000000089 INF: ======================================
17-02-28 20:20:30.992 -08 000000086 INF: ======================================
17-02-28 20:20:31.053 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:20:31.053 -08 000000090 INF: ======================================
17-02-28 20:20:31.054 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:31.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:31.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:20:31.090 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:31.090 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:20:31.139 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:31.139 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:20:31.182 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:31.190 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:31.190 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:20:31.232 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:31.232 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:31.232 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:31.233 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:20:31.241 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:31.241 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:31.241 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:20:31.242 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:20:31.491 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:31.554 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:31.804 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:31.863 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:31.880 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:20:31.902 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0540381251742756Best Z position at top surface = -0.124606453902507Best Z position at top surface + compensator offset = -0.101906453902507 C:3,L:7,B
17-02-28 20:20:31.904 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.124606453902507
17-02-28 20:20:31.904 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.74354
17-02-28 20:20:31.904 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0540381251742756
17-02-28 20:20:31.904 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.4037
17-02-28 20:20:31.904 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0540381251742756.
17-02-28 20:20:31.904 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:32.038 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:20:32.038 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:20:32.052 -08 000000077 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:32.052 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:32.054 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.054 -08 000000018 INF: Lane 7, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:20:32.054 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.056 -08 000000064 INF: ===================Move Tilt Motor 2===================
17-02-28 20:20:32.056 -08 000000082 INF: ===================Move Tilt Motor 3===================
17-02-28 20:20:32.056 -08 000000085 INF: ===================Move Tilt Motor 1===================
17-02-28 20:20:32.056 -08 000000085 INF: ======================================
17-02-28 20:20:32.056 -08 000000082 INF: ======================================
17-02-28 20:20:32.057 -08 000000064 INF: ======================================
17-02-28 20:20:32.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.059 -08 000000018 INF: ETF Best Z: -0.05403813 mm (14166 DAC)
17-02-28 20:20:32.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.060 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.060 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:20:32.061 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.061 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.067 -08 000000018 INF: Swath 1 position calculated to be: {X=22.15734, Y=39.70494} from estimated center X= 22.652, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:20:32.067 -08 000000018 INF: Swath 2 position calculated to be: {X=23.26534, Y=39.70494} from estimated center X= 22.652, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:20:32.461 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:32.474 -08 000000018 INF: Swath 0: Converted transform from (92.96733, -11.40828) pixels to (0.032085, -0.003795) mm.
17-02-28 20:20:32.479 -08 000000018 INF: Swath 1: Converted transform from (71.06396, -7.51053) pixels to (0.024495, -0.00276) mm.
17-02-28 20:20:32.480 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494===================
17-02-28 20:20:32.481 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494===================
17-02-28 20:20:32.481 -08 000000018 INF: Transformed XStagePosition from 22.15734 mm to 22.1894202828407 mm.
17-02-28 20:20:32.492 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4911507397201 mm.
17-02-28 20:20:32.492 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2911507397201 mm.
17-02-28 20:20:32.492 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3819007397201 mm.
17-02-28 20:20:32.494 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:32.495 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:20:32.495 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:32.495 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = G_1
17-02-28 20:20:32.503 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:32.503 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:32.504 -08 000000033 INF: ===================MoveEmissionFilters===================
17-02-28 20:20:32.504 -08 000000077 INF: ===================Move X,Y===================
17-02-28 20:20:32.504 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:32.505 -08 000000082 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:32.505 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:32.505 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:20:32.505 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:32.505 -08 000000077 INF: ===================Move X,Y, Parallel===================
17-02-28 20:20:32.505 -08 000000081 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:20:32.505 -08 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:32.505 -08 000000081 INF: Z Motor: Moving to -0.0740 mm, started at -0.0100 mm
17-02-28 20:20:32.505 -08 000000081 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:20:32.506 -08 000000082 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:32.506 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:32.506 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:32.506 -08 000000051 INF: ===================Move X Motor without settling===================
17-02-28 20:20:32.506 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:32.507 -08 000000051 INF: X Motor: Xmit PR VM\n
17-02-28 20:20:32.507 -08 000000108 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:20:32.507 -08 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:32.507 -08 000000089 INF: Y Motor: Moving to 64.4912 mm @25.000 mm/sec, started at 62.9075 mm
17-02-28 20:20:32.507 -08 000000053 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:20:32.507 -08 000000078 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:20:32.507 -08 000000105 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:20:32.507 -08 000000066 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:20:32.507 -08 000000108 INF: ======================================
17-02-28 20:20:32.507 -08 000000052 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:20:32.507 -08 000000053 INF: ======================================
17-02-28 20:20:32.507 -08 000000066 INF: ======================================
17-02-28 20:20:32.508 -08 000000105 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:20:32.508 -08 000000105 INF: ======================================
17-02-28 20:20:32.508 -08 000000052 INF: ======================================
17-02-28 20:20:32.508 -08 000000078 INF: ======================================
17-02-28 20:20:32.509 -08 000000082 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:32.509 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:32.509 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:32.510 -08 000000082 INF: ======================================
17-02-28 20:20:32.510 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:32.510 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:32.510 -08 000000064 INF: ======================================
17-02-28 20:20:32.510 -08 000000087 INF: ======================================
17-02-28 20:20:32.511 -08 000000082 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:20:32.511 -08 000000050 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:20:32.512 -08 000000050 INF: ======================================
17-02-28 20:20:32.512 -08 000000082 INF: ======================================
17-02-28 20:20:32.513 -08 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:32.514 -08 000000025 INF: ======================================
17-02-28 20:20:32.516 -08 000000033 INF: ======================================
17-02-28 20:20:32.520 -08 000000090 INF: FPGA: Recv ZTRG 
17-02-28 20:20:32.520 -08 000000081 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:20:32.521 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:32.582 -08 000000050 INF: FPGA: Recv ZYT 
17-02-28 20:20:32.583 -08 000000081 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:20:32.583 -08 000000081 INF: FPGA: Xmit ZMV 19408\n
17-02-28 20:20:32.584 -08 000000051 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:20:32.584 -08 000000051 INF: X Motor: Xmit PR VI\n
17-02-28 20:20:32.584 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:20:32.584 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:32.584 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:32.642 -08 000000010 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:20:32.642 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:20:32.644 -08 000000051 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:20:32.644 -08 000000051 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:20:32.644 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:20:32.644 -08 000000051 INF: X Motor: Moving to 22.1894 mm @15.000 mm/sec, started at 22.7280 mm
17-02-28 20:20:32.644 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:32.644 -08 000000051 INF: X Motor: Xmit MA -15078\n
17-02-28 20:20:32.707 -08 000000073 INF: FPGA: Recv ZMV 
17-02-28 20:20:32.707 -08 000000081 INF: Z Motor: MoveAndTrigger 'ZMV' command took 124.1398 ms
17-02-28 20:20:32.707 -08 000000081 INF: FPGA: Xmit ZDACR\n
17-02-28 20:20:32.709 -08 000000051 INF: X Motor: Recv MA -15078\r\n>
17-02-28 20:20:32.709 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:20:32.709 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:32.709 -08 000000051 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:20:32.709 -08 000000089 INF: Y Motor: Set target position to 5949115 encoder counts
17-02-28 20:20:32.709 -08 000000089 INF: Y Motor: Xmit s r0xca 5949115\r
17-02-28 20:20:32.767 -08 000000038 INF: FPGA: Recv ZDACR 19408
17-02-28 20:20:32.767 -08 000000081 INF: Z Motor: MoveAndTrigger took 261.5562 ms w/comms
17-02-28 20:20:32.767 -08 000000081 INF: Z Motor: After move to -0.0740, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:20:32.767 -08 000000081 INF: Z Motor: MoveAbsStepped took 261.728 ms
17-02-28 20:20:32.767 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:32.769 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:20:32.769 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:20:32.769 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:32.769 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:20:32.770 -08 000000073 INF: ===================Camera Arm TDI===================
17-02-28 20:20:32.770 -08 000000082 INF: ===================TDI Scan Setup===================
17-02-28 20:20:32.771 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:32.771 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:32.771 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:32.771 -08 000000082 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:20:32.772 -08 000000073 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:32.772 -08 000000082 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:32.772 -08 000000082 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:20:32.832 -08 000000108 INF: FPGA: Recv ZSEL 
17-02-28 20:20:32.833 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:32.833 -08 000000082 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:32.833 -08 000000082 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:20:32.834 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:20:32.834 -08 000000089 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:20:32.834 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:32.894 -08 000000105 INF: FPGA: Recv TDIBB
17-02-28 20:20:32.894 -08 000000082 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:32.896 -08 000000082 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:20:32.896 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:32.898 -08 000000082 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:20:32.898 -08 000000082 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:20:32.898 -08 000000082 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:20:32.956 -08 000000090 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:32.956 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:32.958 -08 000000089 INF: Y Motor: Unshifted Position: 5875539
17-02-28 20:20:32.958 -08 000000082 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:20:32.958 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:32.960 -08 000000082 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:20:32.960 -08 000000082 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:20:32.960 -08 000000082 INF: Z Motor: Arming to move to -0.0340 mm
17-02-28 20:20:32.960 -08 000000082 INF: FPGA: Xmit ZYT 6429115 4\n
17-02-28 20:20:33.008 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:33.019 -08 000000075 INF: FPGA: Recv ZYT 
17-02-28 20:20:33.019 -08 000000082 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6375539 enc / 63.755 mm / ) = 6429115 enc / 64.291 mm
17-02-28 20:20:33.019 -08 000000082 INF: FPGA: Xmit ZARM 8923\n
17-02-28 20:20:33.081 -08 000000036 INF: FPGA: Recv ZARM
17-02-28 20:20:33.081 -08 000000082 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9792 ms
17-02-28 20:20:33.081 -08 000000082 INF: Z Motor: ArmAbsStepped took 120.7894 ms
17-02-28 20:20:33.081 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:33.083 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:33.083 -08 000000082 INF: ===================TDI Scan Setup===================
17-02-28 20:20:33.084 -08 000000082 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:20:33.085 -08 000000082 INF: ===================TDI Scan Setup===================
17-02-28 20:20:33.086 -08 000000082 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:20:33.087 -08 000000082 INF: ===================TDI Scan Setup===================
17-02-28 20:20:33.088 -08 000000082 INF: ======================================
17-02-28 20:20:33.133 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:33.145 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:33.146 -08 000000051 INF: X Motor: Xmit PR ER\n
17-02-28 20:20:33.208 -08 000000051 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:20:33.208 -08 000000051 INF: X Motor: Moved to 22.1885 after 499 ms
17-02-28 20:20:33.208 -08 000000051 INF: ======================================
17-02-28 20:20:33.269 -08 000000089 INF: Y Motor: Unshifted Position: 5949116
17-02-28 20:20:33.269 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:33.269 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:33.331 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:20:33.331 -08 000000089 INF: Y Motor: Moved to 64.4912 after 497 ms
17-02-28 20:20:33.331 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:33.393 -08 000000089 INF: Y Motor: Recv v 4096\r
17-02-28 20:20:33.393 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:33.393 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:33.395 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:33.456 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:33.457 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:20:33.457 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:33.457 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:33.519 -08 000000089 INF: Y Motor: Recv v 402653184\r
17-02-28 20:20:33.519 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:20:33.519 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:33.519 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:33.582 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:20:33.582 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:33.582 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:33.582 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:33.644 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:20:33.644 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:33.644 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:33.706 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:33.707 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:20:33.707 -08 000000089 INF: ======================================
17-02-28 20:20:33.708 -08 000000077 INF: ===================Move X,Y===================
17-02-28 20:20:33.709 -08 000000077 INF: ======================================
17-02-28 20:20:33.739 -08 000000073 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:33.739 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:33.740 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:33.755 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:33.757 -08 000000073 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:33.769 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:34.019 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:34.080 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:34.330 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:34.391 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:34.641 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:34.703 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:34.810 -08 000000073 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:34.810 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:34.810 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:34.825 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:34.827 -08 000000073 INF: ===================Camera Arm TDI===================
17-02-28 20:20:34.828 -08 000000073 INF: ======================================
17-02-28 20:20:34.829 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:34.830 -08 000000081 INF: ======================================
17-02-28 20:20:34.831 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:34.832 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:34.832 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:20:34.832 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:20:34.893 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:34.893 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:20:34.953 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:34.955 -08 000000010 INF: FPGA: Recv ZFREQCL
17-02-28 20:20:34.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:20:34.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:34.956 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:35.015 -08 000000051 INF: FPGA: Recv TDIYERD 6449116
17-02-28 20:20:35.015 -08 000000018 INF: Before scan, Y encoder from FPGA = 6449116 counts (64.491 mm)
17-02-28 20:20:35.015 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:35.016 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:35.016 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:35.017 -08 000000060 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:35.017 -08 000000039 INF: ===================Set YMotor gains for scans===================
17-02-28 20:20:35.017 -08 000000039 INF: ======================================
17-02-28 20:20:35.017 -08 000000060 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:35.018 -08 000000060 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:20:35.018 -08 000000060 INF: FPGA: Xmit TDIYPOS 6338190\n
17-02-28 20:20:35.077 -08 000000073 INF: FPGA: Recv TDIYPOS
17-02-28 20:20:35.077 -08 000000060 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:35.078 -08 000000060 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:20:35.079 -08 000000060 INF: FPGA: Xmit TDIYARM3 139264 6429115 1 1\n
17-02-28 20:20:35.139 -08 000000089 INF: FPGA: Recv TDIYARM3
17-02-28 20:20:35.139 -08 000000060 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:35.140 -08 000000060 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:35.141 -08 000000060 INF: ======================================
17-02-28 20:20:35.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:35.143 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:35.143 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:35.144 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:35.144 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:35.145 -08 000000105 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:20:35.145 -08 000000036 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:20:35.145 -08 000000105 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:20:35.145 -08 000000105 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:20:35.145 -08 000000105 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:20:35.145 -08 000000105 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:20:35.145 -08 000000036 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:20:35.145 -08 000000036 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:20:35.145 -08 000000036 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:20:35.149 -08 000000036 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:20:35.266 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:35.329 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:35.513 -08 000000101 INF: FPGA: Recv EX2MV
17-02-28 20:20:35.513 -08 000000101 INF: FPGA: Recv EX1MV
17-02-28 20:20:35.513 -08 000000036 INF: Excitation Filter 1: Moved -107 steps in 367.4838 ms
17-02-28 20:20:35.513 -08 000000105 INF: Excitation Filter 2: Moved -107 steps in 367.7567 ms
17-02-28 20:20:35.513 -08 000000105 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.864 ms
17-02-28 20:20:35.513 -08 000000105 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.9316 ms
17-02-28 20:20:35.513 -08 000000036 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.5845 ms
17-02-28 20:20:35.513 -08 000000036 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.0784 ms
17-02-28 20:20:35.513 -08 000000105 INF: ======================================
17-02-28 20:20:35.514 -08 000000036 INF: ======================================
17-02-28 20:20:35.514 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:35.516 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:35.516 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:20:35.516 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:35.516 -08 000000057 INF: ===================FPGA Z Wait===================
17-02-28 20:20:35.516 -08 000000038 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:35.517 -08 000000057 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:20:35.517 -08 000000038 INF: Y Motor: Moving to 14.8428 mm @6.500 mm/sec, started at 64.4912 mm
17-02-28 20:20:35.517 -08 000000038 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:35.517 -08 000000038 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:35.517 -08 000000035 INF: ===================Camera TDI, Parallel===================
17-02-28 20:20:35.517 -08 000000108 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:20:35.518 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:20:35.518 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:20:35.518 -08 000000108 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:20:35.520 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:35.520 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:35.520 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:35.520 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:35.577 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:20:35.577 -08 000000038 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:35.577 -08 000000038 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:35.579 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:35.640 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:35.641 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:20:35.641 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:35.670 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:35.670 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:35.670 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:35.670 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:35.703 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:20:35.703 -08 000000038 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:35.703 -08 000000038 INF: Y Motor: Set target position to 984281 encoder counts
17-02-28 20:20:35.703 -08 000000038 INF: Y Motor: Xmit s r0xca 984281\r
17-02-28 20:20:35.767 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:20:35.767 -08 000000038 INF: Y Motor: Start the move command
17-02-28 20:20:35.767 -08 000000038 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:35.820 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:35.820 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:35.820 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:35.820 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:35.829 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:20:35.829 -08 000000038 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:20:35.829 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:35.887 -08 000000073 INF: FPGA: Recv ZWAIT 
17-02-28 20:20:35.887 -08 000000057 INF: ======================================
17-02-28 20:20:35.890 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:35.950 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:35.951 -08 000000038 INF: Y Motor: Unshifted Position: 5888557
17-02-28 20:20:35.970 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:20:35.970 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:20:35.970 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:20:35.970 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:20:35.970 -08 000000064 INF: ===================Camera #2 Frame #4===================
17-02-28 20:20:35.970 -08 000000077 INF: ===================Camera #0 Frame #4===================
17-02-28 20:20:36.001 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.127 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.133 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:20:36.133 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:20:36.133 -08 000000077 INF: ===================Camera #0 Frame #10===================
17-02-28 20:20:36.134 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:20:36.134 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:20:36.134 -08 000000064 INF: ===================Camera #2 Frame #10===================
17-02-28 20:20:36.200 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:36.265 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:36.266 -08 000000038 INF: Y Motor: Unshifted Position: 5684463
17-02-28 20:20:36.304 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:20:36.304 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:20:36.304 -08 000000077 INF: ===================Camera #0 Frame #17===================
17-02-28 20:20:36.306 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:20:36.306 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:20:36.306 -08 000000064 INF: ===================Camera #2 Frame #17===================
17-02-28 20:20:36.316 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.441 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.477 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:20:36.477 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:20:36.477 -08 000000077 INF: ===================Camera #0 Frame #23===================
17-02-28 20:20:36.480 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:20:36.480 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:20:36.480 -08 000000064 INF: ===================Camera #2 Frame #23===================
17-02-28 20:20:36.515 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:36.576 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:36.577 -08 000000038 INF: Y Motor: Unshifted Position: 5482102
17-02-28 20:20:36.627 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.647 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:20:36.647 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:20:36.647 -08 000000077 INF: ===================Camera #0 Frame #29===================
17-02-28 20:20:36.650 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:20:36.650 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:20:36.650 -08 000000064 INF: ===================Camera #2 Frame #29===================
17-02-28 20:20:36.753 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.817 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:20:36.817 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:20:36.817 -08 000000077 INF: ===================Camera #0 Frame #36===================
17-02-28 20:20:36.821 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:20:36.821 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:20:36.821 -08 000000064 INF: ===================Camera #2 Frame #36===================
17-02-28 20:20:36.826 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:36.889 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:36.890 -08 000000038 INF: Y Motor: Unshifted Position: 5277345
17-02-28 20:20:36.940 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.989 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:20:36.989 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:20:36.989 -08 000000077 INF: ===================Camera #0 Frame #42===================
17-02-28 20:20:36.994 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:20:36.994 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:20:36.994 -08 000000064 INF: ===================Camera #2 Frame #42===================
17-02-28 20:20:37.065 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:37.139 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:37.157 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:20:37.157 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:20:37.157 -08 000000077 INF: ===================Camera #0 Frame #48===================
17-02-28 20:20:37.163 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:20:37.163 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:20:37.163 -08 000000064 INF: ===================Camera #2 Frame #48===================
17-02-28 20:20:37.200 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:37.201 -08 000000038 INF: Y Motor: Unshifted Position: 5076283
17-02-28 20:20:37.251 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:37.327 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:20:37.327 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:20:37.327 -08 000000077 INF: ===================Camera #0 Frame #54===================
17-02-28 20:20:37.333 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:20:37.333 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:20:37.333 -08 000000064 INF: ===================Camera #2 Frame #55===================
17-02-28 20:20:37.375 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:37.450 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:37.495 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:20:37.495 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:20:37.495 -08 000000077 INF: ===================Camera #0 Frame #61===================
17-02-28 20:20:37.506 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:20:37.506 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:20:37.506 -08 000000064 INF: ===================Camera #2 Frame #61===================
17-02-28 20:20:37.511 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:37.512 -08 000000038 INF: Y Motor: Unshifted Position: 4873480
17-02-28 20:20:37.562 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:37.667 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:20:37.667 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:20:37.667 -08 000000077 INF: ===================Camera #0 Frame #67===================
17-02-28 20:20:37.676 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:20:37.676 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:20:37.676 -08 000000064 INF: ===================Camera #2 Frame #67===================
17-02-28 20:20:37.688 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:37.761 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:37.823 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:37.824 -08 000000038 INF: Y Motor: Unshifted Position: 4671114
17-02-28 20:20:37.836 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:20:37.836 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:20:37.836 -08 000000077 INF: ===================Camera #0 Frame #73===================
17-02-28 20:20:37.846 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:20:37.846 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:20:37.846 -08 000000064 INF: ===================Camera #2 Frame #73===================
17-02-28 20:20:37.874 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:37.999 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:38.005 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:20:38.005 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:20:38.005 -08 000000077 INF: ===================Camera #0 Frame #79===================
17-02-28 20:20:38.016 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:20:38.016 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:20:38.016 -08 000000064 INF: ===================Camera #2 Frame #80===================
17-02-28 20:20:38.075 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:38.136 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:38.136 -08 000000038 INF: Y Motor: Unshifted Position: 4466783
17-02-28 20:20:38.175 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:20:38.175 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:20:38.175 -08 000000077 INF: ===================Camera #0 Frame #86===================
17-02-28 20:20:38.186 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:38.190 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:20:38.190 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:20:38.190 -08 000000064 INF: ===================Camera #2 Frame #86===================
17-02-28 20:20:38.312 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:38.347 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:20:38.347 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:20:38.347 -08 000000077 INF: ===================Camera #0 Frame #92===================
17-02-28 20:20:38.360 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:20:38.360 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:20:38.360 -08 000000064 INF: ===================Camera #2 Frame #92===================
17-02-28 20:20:38.386 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:38.451 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:38.452 -08 000000038 INF: Y Motor: Unshifted Position: 4258575
17-02-28 20:20:38.502 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:38.516 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:20:38.516 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:20:38.516 -08 000000077 INF: ===================Camera #0 Frame #98===================
17-02-28 20:20:38.530 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:20:38.530 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:20:38.530 -08 000000064 INF: ===================Camera #2 Frame #99===================
17-02-28 20:20:38.627 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:38.685 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:20:38.685 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:20:38.685 -08 000000077 INF: ===================Camera #0 Frame #104===================
17-02-28 20:20:38.701 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:38.703 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:20:38.703 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:20:38.703 -08 000000064 INF: ===================Camera #2 Frame #105===================
17-02-28 20:20:38.760 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:38.761 -08 000000038 INF: Y Motor: Unshifted Position: 4061828
17-02-28 20:20:38.811 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:38.854 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:20:38.854 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:20:38.854 -08 000000077 INF: ===================Camera #0 Frame #111===================
17-02-28 20:20:38.874 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:20:38.874 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:20:38.874 -08 000000064 INF: ===================Camera #2 Frame #111===================
17-02-28 20:20:38.935 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.010 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:39.027 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:20:39.027 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:20:39.027 -08 000000077 INF: ===================Camera #0 Frame #117===================
17-02-28 20:20:39.044 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:20:39.044 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:20:39.044 -08 000000064 INF: ===================Camera #2 Frame #118===================
17-02-28 20:20:39.072 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:39.073 -08 000000038 INF: Y Motor: Unshifted Position: 3858814
17-02-28 20:20:39.123 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.197 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:20:39.197 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:20:39.197 -08 000000077 INF: ===================Camera #0 Frame #123===================
17-02-28 20:20:39.218 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:20:39.218 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:20:39.218 -08 000000064 INF: ===================Camera #2 Frame #124===================
17-02-28 20:20:39.249 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.322 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:39.367 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:20:39.367 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:20:39.367 -08 000000077 INF: ===================Camera #0 Frame #129===================
17-02-28 20:20:39.384 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:39.385 -08 000000038 INF: Y Motor: Unshifted Position: 3656015
17-02-28 20:20:39.389 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:20:39.389 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:20:39.389 -08 000000064 INF: ===================Camera #2 Frame #130===================
17-02-28 20:20:39.435 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.536 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:20:39.536 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:20:39.536 -08 000000077 INF: ===================Camera #0 Frame #136===================
17-02-28 20:20:39.559 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.560 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:20:39.560 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:20:39.560 -08 000000064 INF: ===================Camera #2 Frame #137===================
17-02-28 20:20:39.634 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:39.696 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:39.697 -08 000000038 INF: Y Motor: Unshifted Position: 3452995
17-02-28 20:20:39.709 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:20:39.709 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:20:39.709 -08 000000077 INF: ===================Camera #0 Frame #142===================
17-02-28 20:20:39.734 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:20:39.734 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:20:39.734 -08 000000064 INF: ===================Camera #2 Frame #143===================
17-02-28 20:20:39.747 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.875 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.879 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:20:39.879 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:20:39.879 -08 000000077 INF: ===================Camera #0 Frame #148===================
17-02-28 20:20:39.904 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:20:39.904 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:20:39.904 -08 000000064 INF: ===================Camera #2 Frame #149===================
17-02-28 20:20:39.946 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:40.009 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:40.010 -08 000000038 INF: Y Motor: Unshifted Position: 3250635
17-02-28 20:20:40.049 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:20:40.049 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:20:40.049 -08 000000077 INF: ===================Camera #0 Frame #155===================
17-02-28 20:20:40.060 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:40.075 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:20:40.075 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:20:40.075 -08 000000064 INF: ===================Camera #2 Frame #156===================
17-02-28 20:20:40.185 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:40.222 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:20:40.222 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:20:40.222 -08 000000077 INF: ===================Camera #0 Frame #161===================
17-02-28 20:20:40.249 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:20:40.249 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:20:40.249 -08 000000064 INF: ===================Camera #2 Frame #162===================
17-02-28 20:20:40.259 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:40.321 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:40.322 -08 000000038 INF: Y Motor: Unshifted Position: 3046538
17-02-28 20:20:40.372 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:40.392 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:20:40.392 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:20:40.392 -08 000000077 INF: ===================Camera #0 Frame #167===================
17-02-28 20:20:40.419 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:20:40.419 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:20:40.419 -08 000000064 INF: ===================Camera #2 Frame #168===================
17-02-28 20:20:40.496 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:40.562 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:20:40.562 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:20:40.562 -08 000000077 INF: ===================Camera #0 Frame #173===================
17-02-28 20:20:40.571 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:40.590 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:20:40.590 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:20:40.590 -08 000000064 INF: ===================Camera #2 Frame #175===================
17-02-28 20:20:40.632 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:40.633 -08 000000038 INF: Y Motor: Unshifted Position: 2844395
17-02-28 20:20:40.683 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:40.732 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:20:40.732 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:20:40.732 -08 000000077 INF: ===================Camera #0 Frame #180===================
17-02-28 20:20:40.764 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:20:40.764 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:20:40.764 -08 000000064 INF: ===================Camera #2 Frame #181===================
17-02-28 20:20:40.809 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:40.882 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:40.905 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:20:40.905 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:20:40.905 -08 000000077 INF: ===================Camera #0 Frame #186===================
17-02-28 20:20:40.935 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:20:40.935 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:20:40.935 -08 000000064 INF: ===================Camera #2 Frame #187===================
17-02-28 20:20:40.945 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:40.946 -08 000000038 INF: Y Motor: Unshifted Position: 2640074
17-02-28 20:20:40.996 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.074 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:20:41.074 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:20:41.074 -08 000000077 INF: ===================Camera #0 Frame #192===================
17-02-28 20:20:41.106 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:20:41.106 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:20:41.106 -08 000000064 INF: ===================Camera #2 Frame #194===================
17-02-28 20:20:41.120 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.195 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:41.243 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:20:41.243 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:20:41.243 -08 000000077 INF: ===================Camera #0 Frame #199===================
17-02-28 20:20:41.257 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:41.258 -08 000000038 INF: Y Motor: Unshifted Position: 2436419
17-02-28 20:20:41.280 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:20:41.280 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:20:41.280 -08 000000064 INF: ===================Camera #2 Frame #200===================
17-02-28 20:20:41.308 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.415 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:20:41.415 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:20:41.415 -08 000000077 INF: ===================Camera #0 Frame #205===================
17-02-28 20:20:41.433 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.451 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:20:41.451 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:20:41.451 -08 000000064 INF: ===================Camera #2 Frame #206===================
17-02-28 20:20:41.507 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:41.568 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:41.569 -08 000000038 INF: Y Motor: Unshifted Position: 2235561
17-02-28 20:20:41.584 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:20:41.584 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:20:41.584 -08 000000077 INF: ===================Camera #0 Frame #211===================
17-02-28 20:20:41.619 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.622 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:20:41.622 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:20:41.622 -08 000000064 INF: ===================Camera #2 Frame #213===================
17-02-28 20:20:41.744 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.754 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:20:41.754 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:20:41.754 -08 000000077 INF: ===================Camera #0 Frame #217===================
17-02-28 20:20:41.796 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:20:41.796 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:20:41.796 -08 000000064 INF: ===================Camera #2 Frame #219===================
17-02-28 20:20:41.818 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:41.879 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:41.880 -08 000000038 INF: Y Motor: Unshifted Position: 2032762
17-02-28 20:20:41.924 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:20:41.924 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:20:41.924 -08 000000077 INF: ===================Camera #0 Frame #224===================
17-02-28 20:20:41.930 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.967 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:20:41.967 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:20:41.967 -08 000000064 INF: ===================Camera #2 Frame #225===================
17-02-28 20:20:42.056 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.096 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:20:42.096 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:20:42.096 -08 000000077 INF: ===================Camera #0 Frame #230===================
17-02-28 20:20:42.129 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:42.138 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:20:42.138 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:20:42.138 -08 000000064 INF: ===================Camera #2 Frame #232===================
17-02-28 20:20:42.194 -08 000000038 INF: Y Motor: Unshifted Position: 1830394
17-02-28 20:20:42.195 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:42.244 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.265 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:20:42.265 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:20:42.265 -08 000000077 INF: ===================Camera #0 Frame #236===================
17-02-28 20:20:42.312 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:20:42.312 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:20:42.312 -08 000000064 INF: ===================Camera #2 Frame #238===================
17-02-28 20:20:42.371 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.433 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:20:42.433 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:20:42.433 -08 000000077 INF: ===================Camera #0 Frame #242===================
17-02-28 20:20:42.445 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:42.483 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:20:42.483 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:20:42.483 -08 000000064 INF: ===================Camera #2 Frame #244===================
17-02-28 20:20:42.505 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:42.506 -08 000000038 INF: Y Motor: Unshifted Position: 1626081
17-02-28 20:20:42.556 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.603 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:20:42.603 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:20:42.603 -08 000000077 INF: ===================Camera #0 Frame #249===================
17-02-28 20:20:42.654 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:20:42.654 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:20:42.654 -08 000000064 INF: ===================Camera #2 Frame #251===================
17-02-28 20:20:42.679 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.755 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:42.776 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:20:42.776 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:20:42.776 -08 000000077 INF: ===================Camera #0 Frame #255===================
17-02-28 20:20:42.816 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:42.817 -08 000000038 INF: Y Motor: Unshifted Position: 1423923
17-02-28 20:20:42.828 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:20:42.828 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:20:42.828 -08 000000064 INF: ===================Camera #2 Frame #257===================
17-02-28 20:20:42.867 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.946 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:20:42.946 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:20:42.946 -08 000000077 INF: ===================Camera #0 Frame #261===================
17-02-28 20:20:42.993 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.999 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:20:42.999 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:20:42.999 -08 000000064 INF: ===================Camera #2 Frame #263===================
17-02-28 20:20:43.066 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:43.116 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:20:43.116 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:20:43.116 -08 000000077 INF: ===================Camera #0 Frame #268===================
17-02-28 20:20:43.129 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:43.130 -08 000000038 INF: Y Motor: Unshifted Position: 1220469
17-02-28 20:20:43.170 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:20:43.170 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:20:43.170 -08 000000064 INF: ===================Camera #2 Frame #270===================
17-02-28 20:20:43.180 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:43.252 -08 000000086 INF: FPGA: Recv TDIYWAIT
17-02-28 20:20:43.252 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:43.254 -08 000000108 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:20:43.255 -08 000000089 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:20:43.255 -08 000000045 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:20:43.255 -08 000000089 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:20:43.255 -08 000000089 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:20:43.255 -08 000000089 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:20:43.255 -08 000000045 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:20:43.255 -08 000000089 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:20:43.255 -08 000000045 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:20:43.255 -08 000000045 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:20:43.263 -08 000000045 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:20:43.288 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:43.288 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:43.288 -08 000000077 INF: ===================Camera #0 Frame #272===================
17-02-28 20:20:43.301 -08 000000077 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:43.302 -08 000000077 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:43.304 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:43.379 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:43.441 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:43.442 -08 000000038 INF: Y Motor: Unshifted Position: 1017453
17-02-28 20:20:43.463 -08 000000077 INF: Camera #0 ReleaseBuffer
17-02-28 20:20:43.463 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:43.463 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:43.463 -08 000000064 INF: ===================Camera #2 Frame #272===================
17-02-28 20:20:43.463 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:20:43.469 -08 000000064 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:43.470 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:43.492 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:43.493 -08 000000077 INF: ======================================
17-02-28 20:20:43.625 -08 000000060 INF: FPGA: Recv EX1MV
17-02-28 20:20:43.625 -08 000000089 INF: Excitation Filter 1: Moved 107 steps in 369.9401 ms
17-02-28 20:20:43.625 -08 000000089 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.0605 ms
17-02-28 20:20:43.625 -08 000000089 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.1312 ms
17-02-28 20:20:43.625 -08 000000089 INF: ======================================
17-02-28 20:20:43.628 -08 000000038 INF: Y Motor: Unshifted Position: 984281
17-02-28 20:20:43.628 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:43.628 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:43.668 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:20:43.668 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:20:43.690 -08 000000039 INF: FPGA: Recv EX2MV
17-02-28 20:20:43.690 -08 000000045 INF: Excitation Filter 2: Moved 107 steps in 434.723 ms
17-02-28 20:20:43.690 -08 000000045 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 434.8541 ms
17-02-28 20:20:43.690 -08 000000045 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 434.9393 ms
17-02-28 20:20:43.690 -08 000000045 INF: ======================================
17-02-28 20:20:43.691 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:43.691 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:43.692 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:20:43.692 -08 000000038 INF: Y Motor: Moved to 14.8428 after 7863 ms
17-02-28 20:20:43.692 -08 000000038 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:43.693 -08 000000108 INF: ======================================
17-02-28 20:20:43.703 -08 000000064 INF: ======================================
17-02-28 20:20:43.705 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:20:43.706 -08 000000035 INF: ======================================
17-02-28 20:20:43.753 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:43.754 -08 000000038 INF: Y Motor: Recv v 4097\r
17-02-28 20:20:43.754 -08 000000038 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:43.754 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:43.816 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:20:43.816 -08 000000038 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:43.816 -08 000000038 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:43.878 -08 000000038 INF: Y Motor: Recv v 134217728\r
17-02-28 20:20:43.878 -08 000000038 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:20:43.878 -08 000000038 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:43.878 -08 000000038 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:43.940 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:20:43.940 -08 000000038 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:43.940 -08 000000038 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:43.940 -08 000000038 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:44.002 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:20:44.002 -08 000000038 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:44.002 -08 000000038 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:44.003 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:44.064 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:20:44.064 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:44.064 -08 000000038 INF: ======================================
17-02-28 20:20:44.066 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:44.067 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:44.067 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.068 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:20:44.124 -08 000000101 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:20:44.124 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:44.190 -08 000000064 INF: FPGA: Recv TDIYERD 1484283
17-02-28 20:20:44.190 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:20:44.251 -08 000000086 INF: FPGA: Recv ZADCR 18952
17-02-28 20:20:44.251 -08 000000018 INF: At scan end Y pos = 14.843 and Z pos = -0.073. Y moved -48.539 mm
17-02-28 20:20:44.251 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:20:44.313 -08 000000010 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:20:44.313 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:20:44.313 -08 000000018 INF: TDIScan finished after 11831.6951 ms
17-02-28 20:20:44.313 -08 000000018 INF: Image[0]: Y should trigger at 63.382 mm, 2nd row was at 64.291 mm (error = 0.909 mm)
17-02-28 20:20:44.313 -08 000000018 INF: Image[2]: Y should trigger at 63.382 mm, 2nd row was at 64.291 mm (error = 0.909 mm)
17-02-28 20:20:44.314 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:44.315 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.348 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.848 um
17-02-28 20:20:44.349 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.350 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:20:44.374 -08 000000089 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:20:44.375 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:44.375 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.375 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:44.375 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:44.375 -08 000000052 INF: ===================Dither Clean Up Command===================
17-02-28 20:20:44.375 -08 000000108 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:20:44.375 -08 000000105 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:20:44.376 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:20:44.376 -08 000000050 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:20:44.376 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 5 of 5 seconds left===================
17-02-28 20:20:44.376 -08 000000105 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:20:44.376 -08 000000105 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:20:44.376 -08 000000050 INF: ======================================
17-02-28 20:20:44.376 -08 000000072 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:44.376 -08 000000045 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:44.376 -08 000000108 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:44.376 -08 000000108 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:44.377 -08 000000072 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:20:44.380 -08 000000045 INF: ===================LFT:Extracting coords===================
17-02-28 20:20:44.405 -08 000000045 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:44.406 -08 000000045 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:20:44.406 -08 000000010 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.406 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.407 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.407 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.407 -08 000000010 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:44.407 -08 000000038 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:44.407 -08 000000066 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:44.407 -08 000000039 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:44.436 -08 000000085 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:44.436 -08 000000085 INF: FPGA: Recv ZSEL 
17-02-28 20:20:44.436 -08 000000072 INF: FPGA: Xmit ZDACW 19408\n
17-02-28 20:20:44.436 -08 000000105 INF: ======================================
17-02-28 20:20:44.438 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:20:44.438 -08 000000108 INF: ======================================
17-02-28 20:20:44.481 -08 000000010 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:44.481 -08 000000038 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:44.481 -08 000000066 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:44.481 -08 000000039 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:44.503 -08 000000075 INF: FPGA: Recv ZDACW 
17-02-28 20:20:44.503 -08 000000072 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:20:44.504 -08 000000072 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:20:44.564 -08 000000053 INF: FPGA: Recv TDIBB
17-02-28 20:20:44.565 -08 000000072 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:44.566 -08 000000072 INF: ======================================
17-02-28 20:20:44.632 -08 000000010 INF: LFT found best fwhm score 2.000258 in 151 ms
17-02-28 20:20:44.632 -08 000000038 INF: LFT found best fwhm score 2.000108 in 151 ms
17-02-28 20:20:44.632 -08 000000010 INF: LFT found good score at index 1669 with fwhm value 2.000258. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:44.632 -08 000000038 INF: LFT found good score at index 1733 with fwhm value 2.000108. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:44.632 -08 000000039 INF: LFT found best fwhm score 2.000017 in 151 ms
17-02-28 20:20:44.632 -08 000000039 INF: LFT found good score at index 7561 with fwhm value 2.000017. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:44.632 -08 000000010 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.632 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.632 -08 000000066 INF: LFT found best fwhm score 2.000284 in 151 ms
17-02-28 20:20:44.633 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.633 -08 000000066 INF: LFT found good score at index 3093 with fwhm value 2.000284. Next cycle, cycle 4 starting Z position for bottom surface is at -0.053 mm FC:A, C:3,L:7,B
17-02-28 20:20:44.633 -08 000000010 INF: ======================================
17-02-28 20:20:44.633 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.633 -08 000000038 INF: ======================================
17-02-28 20:20:44.633 -08 000000039 INF: ======================================
17-02-28 20:20:44.633 -08 000000066 INF: ======================================
17-02-28 20:20:44.634 -08 000000045 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:44.635 -08 000000045 INF: LFT weighted average best Z for bottom surface is at -0.054mm FC:A, C:3,L:7,B
17-02-28 20:20:44.635 -08 000000045 INF: ======================================
17-02-28 20:20:44.636 -08 000000052 INF: ======================================
17-02-28 20:20:44.637 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.638 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:20:44.638 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.638 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:20:44.638 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:20:44.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:20:44.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494===================
17-02-28 20:20:44.640 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494===================
17-02-28 20:20:44.640 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:20:44.640 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494===================
17-02-28 20:20:44.641 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 5 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:20:44.641 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 5 of 5 seconds left===================
17-02-28 20:20:44.663 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:20:44.663 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:44.664 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494===================
17-02-28 20:20:44.664 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:44.664 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494===================
17-02-28 20:20:44.664 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:20:44.664 -08 000000018 INF: Transformed XStagePosition from 23.26534 mm to 23.2898300830275 mm.
17-02-28 20:20:44.676 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4921857396849 mm.
17-02-28 20:20:44.676 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2921857396849 mm.
17-02-28 20:20:44.676 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3829357396848 mm.
17-02-28 20:20:44.679 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.679 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:20:44.679 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.680 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -74.0 um, section = G_1
17-02-28 20:20:44.682 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:44.682 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:44.698 -08 000000025 INF: ===================Move X,Y===================
17-02-28 20:20:44.698 -08 000000075 INF: ===================MoveEmissionFilters===================
17-02-28 20:20:44.698 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:44.699 -08 000000025 INF: ===================Move X,Y, Parallel===================
17-02-28 20:20:44.699 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:20:44.699 -08 000000073 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:20:44.700 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:44.701 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:20:44.702 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:44.702 -08 000000036 INF: ===================Move X Motor without settling===================
17-02-28 20:20:44.702 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:44.702 -08 000000036 INF: X Motor: Xmit PR VM\n
17-02-28 20:20:44.703 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:44.703 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:44.703 -08 000000058 INF: Y Motor: Moving to 64.4922 mm @25.000 mm/sec, started at 14.8428 mm
17-02-28 20:20:44.703 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:44.703 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:44.703 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:44.704 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:44.704 -08 000000038 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:44.704 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:20:44.705 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:44.705 -08 000000038 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:44.705 -08 000000085 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:20:44.705 -08 000000085 INF: ======================================
17-02-28 20:20:44.705 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:44.706 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:20:44.707 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:44.707 -08 000000082 INF: ===================Camera Arm TDI===================
17-02-28 20:20:44.707 -08 000000087 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:20:44.707 -08 000000085 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:20:44.707 -08 000000053 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:20:44.708 -08 000000085 INF: ======================================
17-02-28 20:20:44.708 -08 000000105 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:20:44.708 -08 000000053 INF: ======================================
17-02-28 20:20:44.708 -08 000000082 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:44.708 -08 000000105 INF: ======================================
17-02-28 20:20:44.709 -08 000000082 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:44.709 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":7,"Tile":2103,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF213","HCSMMF244","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.709 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:44.710 -08 000000085 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:20:44.710 -08 000000064 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:20:44.710 -08 000000064 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:20:44.710 -08 000000085 INF: ======================================
17-02-28 20:20:44.710 -08 000000053 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:20:44.711 -08 000000064 INF: ======================================
17-02-28 20:20:44.711 -08 000000047 INF: ======================================
17-02-28 20:20:44.711 -08 000000053 INF: ======================================
17-02-28 20:20:44.712 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:44.713 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:44.713 -08 000000010 INF: ======================================
17-02-28 20:20:44.714 -08 000000030 INF: ======================================
17-02-28 20:20:44.730 -08 000000105 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:20:44.731 -08 000000105 INF: ======================================
17-02-28 20:20:44.733 -08 000000038 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:44.734 -08 000000038 INF: ======================================
17-02-28 20:20:44.735 -08 000000075 INF: ======================================
17-02-28 20:20:44.750 -08 000000064 INF: FPGA: Recv ZSEL 
17-02-28 20:20:44.752 -08 000000036 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:20:44.752 -08 000000036 INF: X Motor: Xmit PR VI\n
17-02-28 20:20:44.752 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:20:44.752 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:44.752 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:44.752 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:44.752 -08 000000087 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:20:44.808 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":7,"Tile":2101,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF218","HCSMMF257","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.815 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:20:44.816 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:44.817 -08 000000036 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:20:44.817 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:20:44.817 -08 000000036 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:20:44.817 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:44.817 -08 000000036 INF: X Motor: Moving to 23.2898 mm @15.000 mm/sec, started at 22.1885 mm
17-02-28 20:20:44.817 -08 000000036 INF: X Motor: Xmit MA -14627\n
17-02-28 20:20:44.820 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:20:44.821 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:44.826 -08 000000087 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:20:44.827 -08 000000087 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:20:44.827 -08 000000087 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:20:44.832 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":7,"Tile":2104,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF221","HCSMMF197","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.842 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":7,"Tile":2105,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF216","HCSMMF266","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.843 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":7,"Tile":2106,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF206","HCSMMF268","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.868 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":7,"Tile":2102,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF249","HCSMMF278","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.869 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":7,"Tile":2108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF274","HCSMMF240","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.870 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":7,"Tile":2110,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF181","HCSMMF183","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.872 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":7,"Tile":2112,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF241","HCSMMF231","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.873 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":7,"Tile":2107,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF261","HCSMMF263","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.874 -08 000000081 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:44.874 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:44.874 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":7,"Tile":2113,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF193","HCSMMF248","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.875 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":7,"Tile":2109,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF179","HCSMMF287","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.876 -08 000000036 INF: X Motor: Recv MA -14627\r\n>
17-02-28 20:20:44.876 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:20:44.876 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:44.876 -08 000000036 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:20:44.876 -08 000000058 INF: Y Motor: Set target position to 5949219 encoder counts
17-02-28 20:20:44.876 -08 000000058 INF: Y Motor: Xmit s r0xca 5949219\r
17-02-28 20:20:44.876 -08 000000087 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:20:44.876 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":7,"Tile":2111,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF177","HCSMMF252","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.876 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:44.877 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":7,"Tile":2114,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF202","HCSMMF271","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.878 -08 000000087 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:20:44.878 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":7,"Tile":2116,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF205","HCSMMF280","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.878 -08 000000087 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:20:44.878 -08 000000087 INF: Z Motor: Arming to move to -0.0340 mm
17-02-28 20:20:44.878 -08 000000087 INF: FPGA: Xmit ZYT 6429219 4\n
17-02-28 20:20:44.879 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":7,"Tile":2115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF255","HCSMMF190","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.880 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":7,"Tile":2117,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF192","HCSMMF242","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.881 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":7,"Tile":2119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF282","HCSMMF277","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.881 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":7,"Tile":2120,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF209","HCSMMF243","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.882 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":7,"Tile":2118,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF189","HCSMMF279","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.883 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":7,"Tile":2121,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF229","HCSMMF225","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.884 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":7,"Tile":2123,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF269","HCSMMF224","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.885 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":7,"Tile":2122,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF230","HCSMMF186","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.886 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":7,"Tile":2124,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF200","HCSMMF286","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.887 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":7,"Tile":2128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF272","HCSMMF258","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.888 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":7,"Tile":2125,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF256","HCSMMF211","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.889 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":7,"Tile":2127,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF276","HCSMMF264","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.890 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":7,"Tile":2126,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF223","HCSMMF253","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.892 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:44.898 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:20:44.938 -08 000000081 INF: FPGA: Recv ZYT 
17-02-28 20:20:44.938 -08 000000087 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1484281 enc / 14.843 mm / ) = 6429219 enc / 64.292 mm
17-02-28 20:20:44.938 -08 000000087 INF: FPGA: Xmit ZARM 8923\n
17-02-28 20:20:44.939 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:20:44.939 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:20:44.939 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:44.994 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:44.994 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:20:44.999 -08 000000108 INF: FPGA: Recv ZARM
17-02-28 20:20:44.999 -08 000000087 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.1254 ms
17-02-28 20:20:44.999 -08 000000087 INF: Z Motor: ArmAbsStepped took 120.6609 ms
17-02-28 20:20:44.999 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:45.001 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:20:45.001 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:20:45.001 -08 000000058 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:20:45.001 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.002 -08 000000087 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:20:45.003 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:20:45.004 -08 000000087 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:20:45.004 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:20:45.006 -08 000000087 INF: ======================================
17-02-28 20:20:45.030 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:45.036 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:20:45.125 -08 000000058 INF: Y Motor: Unshifted Position: 1065656
17-02-28 20:20:45.125 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:45.131 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:20:45.175 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.213 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:45.219 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:20:45.299 -08 000000082 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:45.300 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:45.300 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:45.303 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.315 -08 000000082 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:45.317 -08 000000082 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:45.322 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:45.376 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:45.376 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 4 of 5 seconds left===================
17-02-28 20:20:45.439 -08 000000058 INF: Y Motor: Unshifted Position: 1773453
17-02-28 20:20:45.489 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.500 -08 000000036 INF: X Motor: Xmit PR ER\n
17-02-28 20:20:45.562 -08 000000036 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:20:45.562 -08 000000036 INF: X Motor: Moved to 23.2896 after 686 ms
17-02-28 20:20:45.562 -08 000000036 INF: ======================================
17-02-28 20:20:45.611 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:20:45.612 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.752 -08 000000058 INF: Y Motor: Unshifted Position: 2549292
17-02-28 20:20:45.802 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.916 -08 000000082 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:45.916 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:45.916 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:45.926 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.931 -08 000000082 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:45.933 -08 000000082 INF: ===================Camera Arm TDI===================
17-02-28 20:20:45.934 -08 000000082 INF: ======================================
17-02-28 20:20:45.935 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:45.936 -08 000000073 INF: ======================================
17-02-28 20:20:46.064 -08 000000058 INF: Y Motor: Unshifted Position: 3329250
17-02-28 20:20:46.114 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:46.238 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:46.375 -08 000000058 INF: Y Motor: Unshifted Position: 4115149
17-02-28 20:20:46.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:46.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 3 of 5 seconds left===================
17-02-28 20:20:46.425 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:46.551 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:46.691 -08 000000058 INF: Y Motor: Unshifted Position: 4890086
17-02-28 20:20:46.741 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:46.863 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:46.998 -08 000000058 INF: Y Motor: Unshifted Position: 5672172
17-02-28 20:20:47.048 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:47.175 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:47.316 -08 000000058 INF: Y Motor: Unshifted Position: 5949220
17-02-28 20:20:47.316 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:47.316 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:47.375 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:20:47.375 -08 000000058 INF: Y Motor: Moved to 64.4922 after 2373 ms
17-02-28 20:20:47.375 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:47.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:47.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 2 of 5 seconds left===================
17-02-28 20:20:47.437 -08 000000058 INF: Y Motor: Recv v 4096\r
17-02-28 20:20:47.437 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:47.437 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:47.499 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:20:47.499 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:47.499 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:47.561 -08 000000058 INF: Y Motor: Recv v 402653184\r
17-02-28 20:20:47.561 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:20:47.561 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:47.561 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:47.623 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:20:47.623 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:47.623 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:47.623 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:47.685 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:20:47.685 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:47.685 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:47.748 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:20:47.748 -08 000000058 INF: ======================================
17-02-28 20:20:47.750 -08 000000025 INF: ===================Move X,Y===================
17-02-28 20:20:47.752 -08 000000025 INF: ======================================
17-02-28 20:20:47.753 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:47.755 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:47.755 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:20:47.755 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:20:47.809 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:47.809 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:20:47.869 -08 000000047 INF: FPGA: Recv ZFREQCL
17-02-28 20:20:47.869 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:20:47.870 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:47.870 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:47.935 -08 000000073 INF: FPGA: Recv TDIYERD 6449220
17-02-28 20:20:47.935 -08 000000018 INF: Before scan, Y encoder from FPGA = 6449220 counts (64.492 mm)
17-02-28 20:20:47.935 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:47.936 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:47.937 -08 000000038 INF: ===================Set YMotor gains for scans===================
17-02-28 20:20:47.937 -08 000000045 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:47.937 -08 000000038 INF: ======================================
17-02-28 20:20:47.938 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:47.938 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:20:47.938 -08 000000045 INF: FPGA: Xmit TDIYPOS 6338294\n
17-02-28 20:20:47.996 -08 000000085 INF: FPGA: Recv TDIYPOS
17-02-28 20:20:47.996 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:47.998 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:20:47.998 -08 000000045 INF: FPGA: Xmit TDIYARM3 139264 6429219 1 1\n
17-02-28 20:20:48.058 -08 000000072 INF: FPGA: Recv TDIYARM3
17-02-28 20:20:48.058 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:48.060 -08 000000045 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:48.061 -08 000000045 INF: ======================================
17-02-28 20:20:48.062 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:48.062 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:48.063 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:48.063 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:48.064 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:48.064 -08 000000078 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:20:48.065 -08 000000050 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:20:48.065 -08 000000078 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:20:48.065 -08 000000078 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:20:48.065 -08 000000050 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:20:48.065 -08 000000078 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:20:48.065 -08 000000050 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:20:48.065 -08 000000050 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:20:48.065 -08 000000078 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:20:48.066 -08 000000050 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:20:48.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:48.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 1 of 5 seconds left===================
17-02-28 20:20:48.446 -08 000000025 INF: FPGA: Recv EX2MV
17-02-28 20:20:48.446 -08 000000025 INF: FPGA: Recv EX1MV
17-02-28 20:20:48.446 -08 000000078 INF: Excitation Filter 2: Moved -107 steps in 381.1431 ms
17-02-28 20:20:48.446 -08 000000050 INF: Excitation Filter 1: Moved -107 steps in 381.0595 ms
17-02-28 20:20:48.446 -08 000000050 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 381.299 ms
17-02-28 20:20:48.446 -08 000000050 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 381.3751 ms
17-02-28 20:20:48.446 -08 000000078 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 381.2857 ms
17-02-28 20:20:48.446 -08 000000078 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 381.7673 ms
17-02-28 20:20:48.447 -08 000000050 INF: ======================================
17-02-28 20:20:48.447 -08 000000078 INF: ======================================
17-02-28 20:20:48.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:48.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:48.450 -08 000000109 INF: ===================Camera TDI===================
17-02-28 20:20:48.450 -08 000000073 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:48.450 -08 000000105 INF: ===================FPGA Z Wait===================
17-02-28 20:20:48.450 -08 000000086 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:48.450 -08 000000086 INF: Y Motor: Moving to 14.8438 mm @6.500 mm/sec, started at 64.4922 mm
17-02-28 20:20:48.450 -08 000000086 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:48.450 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:48.451 -08 000000109 INF: ===================Camera TDI, Parallel===================
17-02-28 20:20:48.451 -08 000000073 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:20:48.451 -08 000000073 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:20:48.451 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:20:48.451 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:20:48.452 -08 000000105 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:20:48.453 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:48.453 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:48.454 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:48.454 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:48.513 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:20:48.513 -08 000000086 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:48.513 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:48.576 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:20:48.576 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:48.603 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:48.603 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:48.604 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:48.604 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:48.637 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:20:48.637 -08 000000086 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:48.637 -08 000000086 INF: Y Motor: Set target position to 984385 encoder counts
17-02-28 20:20:48.637 -08 000000086 INF: Y Motor: Xmit s r0xca 984385\r
17-02-28 20:20:48.699 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:20:48.699 -08 000000086 INF: Y Motor: Start the move command
17-02-28 20:20:48.699 -08 000000086 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:48.753 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:48.753 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:48.754 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:48.754 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:48.761 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:20:48.761 -08 000000086 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:20:48.761 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:48.821 -08 000000060 INF: FPGA: Recv ZWAIT 
17-02-28 20:20:48.822 -08 000000105 INF: ======================================
17-02-28 20:20:48.885 -08 000000086 INF: Y Motor: Unshifted Position: 5887364
17-02-28 20:20:48.903 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:20:48.903 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:48.903 -08 000000085 INF: ===================Camera #0 Frame #5===================
17-02-28 20:20:48.904 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:48.904 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:48.904 -08 000000069 INF: ===================Camera #2 Frame #5===================
17-02-28 20:20:48.935 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.062 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.076 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:20:49.076 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:20:49.076 -08 000000085 INF: ===================Camera #0 Frame #11===================
17-02-28 20:20:49.078 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:20:49.078 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:20:49.078 -08 000000069 INF: ===================Camera #2 Frame #11===================
17-02-28 20:20:49.198 -08 000000086 INF: Y Motor: Unshifted Position: 5683691
17-02-28 20:20:49.244 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:20:49.244 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:20:49.244 -08 000000085 INF: ===================Camera #0 Frame #17===================
17-02-28 20:20:49.248 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.264 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:20:49.264 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:20:49.264 -08 000000069 INF: ===================Camera #2 Frame #18===================
17-02-28 20:20:49.372 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:49.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:49.377 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:20:49.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:49.417 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:20:49.417 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:20:49.417 -08 000000085 INF: ===================Camera #0 Frame #23===================
17-02-28 20:20:49.441 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:20:49.441 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:20:49.441 -08 000000069 INF: ===================Camera #2 Frame #24===================
17-02-28 20:20:49.476 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:20:49.510 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`13440 (0x03)\r\n(0xFF)
17-02-28 20:20:49.510 -08 000000042 INF: Current Position of Pump is: 13440
17-02-28 20:20:49.511 -08 000000086 INF: Y Motor: Unshifted Position: 5480258
17-02-28 20:20:49.561 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.593 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:20:49.593 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:20:49.593 -08 000000085 INF: ===================Camera #0 Frame #30===================
17-02-28 20:20:49.610 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:20:49.618 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:20:49.618 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:20:49.618 -08 000000069 INF: ===================Camera #2 Frame #31===================
17-02-28 20:20:49.685 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.696 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`13440 (0x03)\r\n(0xFF)
17-02-28 20:20:49.696 -08 000000042 INF: Current Position of Pump is: 13440
17-02-28 20:20:49.696 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Dispensing port PortC===================
17-02-28 20:20:49.774 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:20:49.774 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:20:49.774 -08 000000085 INF: ===================Camera #0 Frame #37===================
17-02-28 20:20:49.792 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:20:49.792 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:20:49.792 -08 000000069 INF: ===================Camera #2 Frame #37===================
17-02-28 20:20:49.796 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V6400OD13440R\r
17-02-28 20:20:49.821 -08 000000086 INF: Y Motor: Unshifted Position: 5278528
17-02-28 20:20:49.871 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.885 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:49.946 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:20:49.946 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:20:49.946 -08 000000085 INF: ===================Camera #0 Frame #43===================
17-02-28 20:20:49.961 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:20:49.961 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:20:49.961 -08 000000069 INF: ===================Camera #2 Frame #43===================
17-02-28 20:20:49.985 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:49.998 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.072 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:50.115 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:20:50.115 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:20:50.115 -08 000000085 INF: ===================Camera #0 Frame #49===================
17-02-28 20:20:50.131 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:20:50.131 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:20:50.131 -08 000000069 INF: ===================Camera #2 Frame #50===================
17-02-28 20:20:50.135 -08 000000086 INF: Y Motor: Unshifted Position: 5074433
17-02-28 20:20:50.185 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.283 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:20:50.283 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:20:50.283 -08 000000085 INF: ===================Camera #0 Frame #55===================
17-02-28 20:20:50.304 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:20:50.304 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:20:50.304 -08 000000069 INF: ===================Camera #2 Frame #56===================
17-02-28 20:20:50.309 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.322 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:50.382 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:50.445 -08 000000086 INF: Y Motor: Unshifted Position: 4872937
17-02-28 20:20:50.453 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:20:50.453 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:20:50.453 -08 000000085 INF: ===================Camera #0 Frame #62===================
17-02-28 20:20:50.476 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:20:50.476 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:20:50.476 -08 000000069 INF: ===================Camera #2 Frame #62===================
17-02-28 20:20:50.495 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.622 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.632 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:50.635 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:20:50.635 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:20:50.635 -08 000000085 INF: ===================Camera #0 Frame #68===================
17-02-28 20:20:50.654 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:20:50.654 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:20:50.654 -08 000000069 INF: ===================Camera #2 Frame #69===================
17-02-28 20:20:50.695 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:50.758 -08 000000086 INF: Y Motor: Unshifted Position: 4669272
17-02-28 20:20:50.808 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.811 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:20:50.811 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:20:50.811 -08 000000085 INF: ===================Camera #0 Frame #75===================
17-02-28 20:20:50.826 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:20:50.826 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:20:50.826 -08 000000069 INF: ===================Camera #2 Frame #75===================
17-02-28 20:20:50.932 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.945 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:50.993 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:20:50.993 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:20:50.993 -08 000000085 INF: ===================Camera #0 Frame #81===================
17-02-28 20:20:50.996 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:20:50.996 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:20:50.996 -08 000000069 INF: ===================Camera #2 Frame #82===================
17-02-28 20:20:51.008 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:51.071 -08 000000086 INF: Y Motor: Unshifted Position: 4465807
17-02-28 20:20:51.121 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:51.161 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:20:51.161 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:20:51.161 -08 000000085 INF: ===================Camera #0 Frame #88===================
17-02-28 20:20:51.170 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:20:51.170 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:20:51.170 -08 000000069 INF: ===================Camera #2 Frame #88===================
17-02-28 20:20:51.245 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:51.258 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:51.318 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:51.333 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:20:51.333 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:20:51.333 -08 000000085 INF: ===================Camera #0 Frame #94===================
17-02-28 20:20:51.339 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:20:51.339 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:20:51.339 -08 000000069 INF: ===================Camera #2 Frame #94===================
17-02-28 20:20:51.382 -08 000000086 INF: Y Motor: Unshifted Position: 4264097
17-02-28 20:20:51.432 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:51.501 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:20:51.501 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:20:51.501 -08 000000085 INF: ===================Camera #0 Frame #100===================
17-02-28 20:20:51.508 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:20:51.508 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:20:51.508 -08 000000069 INF: ===================Camera #2 Frame #100===================
17-02-28 20:20:51.558 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:51.568 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:51.631 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:51.670 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:20:51.670 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:20:51.670 -08 000000085 INF: ===================Camera #0 Frame #106===================
17-02-28 20:20:51.677 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:20:51.677 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:20:51.677 -08 000000069 INF: ===================Camera #2 Frame #107===================
17-02-28 20:20:51.694 -08 000000086 INF: Y Motor: Unshifted Position: 4059985
17-02-28 20:20:51.744 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:51.839 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:20:51.839 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:20:51.839 -08 000000085 INF: ===================Camera #0 Frame #113===================
17-02-28 20:20:51.849 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:20:51.849 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:20:51.849 -08 000000069 INF: ===================Camera #2 Frame #113===================
17-02-28 20:20:51.868 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:51.881 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:51.944 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:52.006 -08 000000086 INF: Y Motor: Unshifted Position: 3856972
17-02-28 20:20:52.011 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:20:52.011 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:20:52.011 -08 000000085 INF: ===================Camera #0 Frame #119===================
17-02-28 20:20:52.019 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:20:52.019 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:20:52.019 -08 000000069 INF: ===================Camera #2 Frame #119===================
17-02-28 20:20:52.056 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:52.180 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:20:52.180 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:20:52.180 -08 000000085 INF: ===================Camera #0 Frame #125===================
17-02-28 20:20:52.182 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:52.189 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:20:52.189 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:20:52.189 -08 000000069 INF: ===================Camera #2 Frame #125===================
17-02-28 20:20:52.194 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:52.256 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:52.256 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:52.256 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:20:52.321 -08 000000086 INF: Y Motor: Unshifted Position: 3653954
17-02-28 20:20:52.349 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:20:52.349 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:20:52.349 -08 000000085 INF: ===================Camera #0 Frame #131===================
17-02-28 20:20:52.359 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:20:52.359 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:20:52.359 -08 000000069 INF: ===================Camera #2 Frame #132===================
17-02-28 20:20:52.371 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:52.493 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:52.517 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:20:52.517 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:20:52.517 -08 000000085 INF: ===================Camera #0 Frame #138===================
17-02-28 20:20:52.531 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:20:52.531 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:20:52.531 -08 000000069 INF: ===================Camera #2 Frame #138===================
17-02-28 20:20:52.631 -08 000000086 INF: Y Motor: Unshifted Position: 3452452
17-02-28 20:20:52.681 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:52.688 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:20:52.688 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:20:52.688 -08 000000085 INF: ===================Camera #0 Frame #144===================
17-02-28 20:20:52.700 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:20:52.700 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:20:52.700 -08 000000069 INF: ===================Camera #2 Frame #144===================
17-02-28 20:20:52.806 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:52.856 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:20:52.856 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:20:52.856 -08 000000085 INF: ===================Camera #0 Frame #150===================
17-02-28 20:20:52.869 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:20:52.869 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:20:52.869 -08 000000069 INF: ===================Camera #2 Frame #151===================
17-02-28 20:20:52.942 -08 000000086 INF: Y Motor: Unshifted Position: 3248789
17-02-28 20:20:52.992 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.025 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:20:53.025 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:20:53.025 -08 000000085 INF: ===================Camera #0 Frame #156===================
17-02-28 20:20:53.041 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:20:53.041 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:20:53.041 -08 000000069 INF: ===================Camera #2 Frame #157===================
17-02-28 20:20:53.116 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.193 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:20:53.193 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:20:53.193 -08 000000085 INF: ===================Camera #0 Frame #162===================
17-02-28 20:20:53.210 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:20:53.210 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:20:53.210 -08 000000069 INF: ===================Camera #2 Frame #163===================
17-02-28 20:20:53.255 -08 000000086 INF: Y Motor: Unshifted Position: 3045127
17-02-28 20:20:53.305 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.356 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:20:53.361 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:20:53.361 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:20:53.361 -08 000000085 INF: ===================Camera #0 Frame #169===================
17-02-28 20:20:53.379 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:20:53.379 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:20:53.379 -08 000000069 INF: ===================Camera #2 Frame #169===================
17-02-28 20:20:53.429 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:53.532 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:20:53.532 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:20:53.532 -08 000000085 INF: ===================Camera #0 Frame #175===================
17-02-28 20:20:53.540 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:53.548 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:20:53.548 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:20:53.548 -08 000000069 INF: ===================Camera #2 Frame #176===================
17-02-28 20:20:53.565 -08 000000086 INF: Y Motor: Unshifted Position: 2843627
17-02-28 20:20:53.615 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.626 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:53.700 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:20:53.700 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:20:53.700 -08 000000085 INF: ===================Camera #0 Frame #181===================
17-02-28 20:20:53.720 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:20:53.720 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:20:53.720 -08 000000069 INF: ===================Camera #2 Frame #182===================
17-02-28 20:20:53.742 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.868 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:20:53.868 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:20:53.868 -08 000000085 INF: ===================Camera #0 Frame #187===================
17-02-28 20:20:53.876 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:53.878 -08 000000086 INF: Y Motor: Unshifted Position: 2640180
17-02-28 20:20:53.889 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:20:53.889 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:20:53.889 -08 000000069 INF: ===================Camera #2 Frame #188===================
17-02-28 20:20:53.928 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.939 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:53.939 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:53.939 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Closing shutoff valve===================
17-02-28 20:20:54.036 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:20:54.036 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:20:54.036 -08 000000085 INF: ===================Camera #0 Frame #193===================
17-02-28 20:20:54.053 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:54.058 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:20:54.058 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:20:54.058 -08 000000069 INF: ===================Camera #2 Frame #194===================
17-02-28 20:20:54.191 -08 000000086 INF: Y Motor: Unshifted Position: 2435870
17-02-28 20:20:54.204 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:20:54.204 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:20:54.204 -08 000000085 INF: ===================Camera #0 Frame #200===================
17-02-28 20:20:54.227 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:20:54.227 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:20:54.227 -08 000000069 INF: ===================Camera #2 Frame #201===================
17-02-28 20:20:54.241 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:54.312 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:54.312 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:54.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:54.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:20:54.314 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:20:54.314 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°, FC temperature to 20°===================
17-02-28 20:20:54.365 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:54.375 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:20:54.375 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:20:54.376 -08 000000085 INF: ===================Camera #0 Frame #206===================
17-02-28 20:20:54.399 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:20:54.399 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:20:54.399 -08 000000069 INF: ===================Camera #2 Frame #207===================
17-02-28 20:20:54.501 -08 000000086 INF: Y Motor: Unshifted Position: 2233716
17-02-28 20:20:54.544 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:20:54.544 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:20:54.544 -08 000000085 INF: ===================Camera #0 Frame #212===================
17-02-28 20:20:54.551 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:54.568 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:20:54.568 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:20:54.568 -08 000000069 INF: ===================Camera #2 Frame #213===================
17-02-28 20:20:54.678 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:54.712 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:20:54.712 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:20:54.712 -08 000000085 INF: ===================Camera #0 Frame #218===================
17-02-28 20:20:54.737 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:20:54.737 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:20:54.737 -08 000000069 INF: ===================Camera #2 Frame #219===================
17-02-28 20:20:54.811 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:20:54.811 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:20:54.812 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:20:54.812 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:20:54.813 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:54.813 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:54.814 -08 000000086 INF: Y Motor: Unshifted Position: 2031350
17-02-28 20:20:54.814 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:54.814 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:20:54.814 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:20:54.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:20:54.864 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:54.880 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:20:54.880 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:20:54.880 -08 000000085 INF: ===================Camera #0 Frame #225===================
17-02-28 20:20:54.906 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:20:54.906 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:20:54.906 -08 000000069 INF: ===================Camera #2 Frame #226===================
17-02-28 20:20:54.988 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.051 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:20:55.051 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:20:55.051 -08 000000085 INF: ===================Camera #0 Frame #231===================
17-02-28 20:20:55.078 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:20:55.078 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:20:55.078 -08 000000069 INF: ===================Camera #2 Frame #232===================
17-02-28 20:20:55.127 -08 000000086 INF: Y Motor: Unshifted Position: 1827893
17-02-28 20:20:55.177 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.219 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:20:55.219 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:20:55.219 -08 000000085 INF: ===================Camera #0 Frame #237===================
17-02-28 20:20:55.248 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:20:55.248 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:20:55.248 -08 000000069 INF: ===================Camera #2 Frame #238===================
17-02-28 20:20:55.301 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.387 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:20:55.387 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:20:55.387 -08 000000085 INF: ===================Camera #0 Frame #243===================
17-02-28 20:20:55.417 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:20:55.417 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:20:55.417 -08 000000069 INF: ===================Camera #2 Frame #244===================
17-02-28 20:20:55.437 -08 000000086 INF: Y Motor: Unshifted Position: 1626184
17-02-28 20:20:55.487 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.555 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:20:55.555 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:20:55.555 -08 000000085 INF: ===================Camera #0 Frame #249===================
17-02-28 20:20:55.586 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:20:55.586 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:20:55.586 -08 000000069 INF: ===================Camera #2 Frame #251===================
17-02-28 20:20:55.614 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.724 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:20:55.724 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:20:55.724 -08 000000085 INF: ===================Camera #0 Frame #256===================
17-02-28 20:20:55.750 -08 000000086 INF: Y Motor: Unshifted Position: 1422726
17-02-28 20:20:55.758 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:20:55.758 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:20:55.758 -08 000000069 INF: ===================Camera #2 Frame #257===================
17-02-28 20:20:55.800 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.895 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:20:55.895 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:20:55.895 -08 000000085 INF: ===================Camera #0 Frame #262===================
17-02-28 20:20:55.924 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.927 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:20:55.927 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:20:55.927 -08 000000069 INF: ===================Camera #2 Frame #263===================
17-02-28 20:20:56.061 -08 000000086 INF: Y Motor: Unshifted Position: 1220354
17-02-28 20:20:56.065 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:20:56.065 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:20:56.065 -08 000000085 INF: ===================Camera #0 Frame #268===================
17-02-28 20:20:56.097 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:20:56.097 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:20:56.097 -08 000000069 INF: ===================Camera #2 Frame #269===================
17-02-28 20:20:56.111 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:56.186 -08 000000035 INF: FPGA: Recv TDIYWAIT
17-02-28 20:20:56.186 -08 000000073 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:56.188 -08 000000073 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:20:56.189 -08 000000105 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:20:56.189 -08 000000075 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:20:56.189 -08 000000105 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:20:56.189 -08 000000105 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:20:56.189 -08 000000105 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:20:56.189 -08 000000075 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:20:56.189 -08 000000105 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:20:56.189 -08 000000075 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:20:56.189 -08 000000075 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:20:56.190 -08 000000075 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:20:56.235 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:56.235 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:56.235 -08 000000085 INF: ===================Camera #0 Frame #272===================
17-02-28 20:20:56.238 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:56.249 -08 000000085 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:56.250 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:56.377 -08 000000086 INF: Y Motor: Unshifted Position: 1016908
17-02-28 20:20:56.384 -08 000000085 INF: Camera #0 ReleaseBuffer
17-02-28 20:20:56.384 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:56.384 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:56.384 -08 000000069 INF: ===================Camera #2 Frame #272===================
17-02-28 20:20:56.384 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:20:56.393 -08 000000069 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:56.394 -08 000000069 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:56.414 -08 000000085 INF: ======================================
17-02-28 20:20:56.427 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:56.559 -08 000000035 INF: FPGA: Recv EX1MV
17-02-28 20:20:56.559 -08 000000035 INF: FPGA: Recv EX2MV
17-02-28 20:20:56.559 -08 000000075 INF: Excitation Filter 2: Moved 107 steps in 368.7345 ms
17-02-28 20:20:56.559 -08 000000075 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 368.8726 ms
17-02-28 20:20:56.559 -08 000000075 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 368.9774 ms
17-02-28 20:20:56.559 -08 000000105 INF: Excitation Filter 1: Moved 107 steps in 368.9315 ms
17-02-28 20:20:56.559 -08 000000105 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.1394 ms
17-02-28 20:20:56.559 -08 000000105 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.366 ms
17-02-28 20:20:56.559 -08 000000075 INF: ======================================
17-02-28 20:20:56.559 -08 000000105 INF: ======================================
17-02-28 20:20:56.561 -08 000000086 INF: Y Motor: Unshifted Position: 984384
17-02-28 20:20:56.561 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:56.561 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:56.561 -08 000000073 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:56.562 -08 000000069 INF: Camera #2 ReleaseBuffer
17-02-28 20:20:56.562 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:20:56.562 -08 000000073 INF: ======================================
17-02-28 20:20:56.598 -08 000000069 INF: ======================================
17-02-28 20:20:56.599 -08 000000109 INF: ===================Camera TDI===================
17-02-28 20:20:56.600 -08 000000109 INF: ======================================
17-02-28 20:20:56.623 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:20:56.623 -08 000000086 INF: Y Motor: Moved to 14.8438 after 7861 ms
17-02-28 20:20:56.623 -08 000000086 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:56.640 -08 000000060 INF: RunCopyService queue size at 2/28/2017 8:20:56 PM is 2
17-02-28 20:20:56.688 -08 000000086 INF: Y Motor: Recv v 4097\r
17-02-28 20:20:56.688 -08 000000086 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:56.688 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:56.750 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:20:56.750 -08 000000086 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:56.750 -08 000000086 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:56.812 -08 000000086 INF: Y Motor: Recv v 134217728\r
17-02-28 20:20:56.812 -08 000000086 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:20:56.812 -08 000000086 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:56.812 -08 000000086 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:56.874 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:20:56.874 -08 000000086 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:56.874 -08 000000086 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:56.874 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:56.936 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:20:56.936 -08 000000086 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:56.936 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:56.998 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:20:56.998 -08 000000086 INF: ======================================
17-02-28 20:20:56.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:57.000 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:57.001 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.001 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:20:57.058 -08 000000025 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:20:57.058 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:57.124 -08 000000053 INF: FPGA: Recv TDIYERD 1484386
17-02-28 20:20:57.124 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:20:57.185 -08 000000085 INF: FPGA: Recv ZADCR 19192
17-02-28 20:20:57.185 -08 000000018 INF: At scan end Y pos = 14.844 and Z pos = -0.074. Y moved -48.539 mm
17-02-28 20:20:57.185 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:20:57.249 -08 000000105 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:20:57.250 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:20:57.250 -08 000000018 INF: TDIScan finished after 12583.9408 ms
17-02-28 20:20:57.250 -08 000000018 INF: Image[0]: Y should trigger at 63.383 mm, 2nd row was at 64.292 mm (error = 0.909 mm)
17-02-28 20:20:57.250 -08 000000018 INF: Image[2]: Y should trigger at 63.383 mm, 2nd row was at 64.292 mm (error = 0.909 mm)
17-02-28 20:20:57.252 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.286 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.833 um
17-02-28 20:20:57.286 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.287 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:20:57.309 -08 000000030 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:20:57.310 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.310 -08 000000109 INF: ===================Dither Clean Up Command===================
17-02-28 20:20:57.310 -08 000000039 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:20:57.310 -08 000000034 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:20:57.310 -08 000000050 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:20:57.311 -08 000000034 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:57.311 -08 000000034 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:57.311 -08 000000039 INF: ======================================
17-02-28 20:20:57.311 -08 000000050 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:20:57.311 -08 000000050 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:20:57.311 -08 000000066 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:57.311 -08 000000069 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:57.312 -08 000000066 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:20:57.314 -08 000000069 INF: ===================LFT:Extracting coords===================
17-02-28 20:20:57.340 -08 000000069 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:57.340 -08 000000069 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:20:57.341 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.341 -08 000000073 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.341 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.342 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.342 -08 000000082 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:57.342 -08 000000073 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:57.342 -08 000000105 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:57.342 -08 000000064 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:57.371 -08 000000075 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:57.371 -08 000000075 INF: FPGA: Recv ZSEL 
17-02-28 20:20:57.371 -08 000000066 INF: FPGA: Xmit ZDACW 19408\n
17-02-28 20:20:57.371 -08 000000050 INF: ======================================
17-02-28 20:20:57.375 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:20:57.375 -08 000000034 INF: ======================================
17-02-28 20:20:57.416 -08 000000082 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:57.416 -08 000000073 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:57.416 -08 000000105 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:57.417 -08 000000064 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:57.433 -08 000000078 INF: FPGA: Recv ZDACW 
17-02-28 20:20:57.434 -08 000000066 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:20:57.434 -08 000000066 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:20:57.495 -08 000000034 INF: FPGA: Recv TDIBB
17-02-28 20:20:57.495 -08 000000066 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:57.496 -08 000000066 INF: ======================================
17-02-28 20:20:57.567 -08 000000073 INF: LFT found best fwhm score 2.000098 in 151 ms
17-02-28 20:20:57.567 -08 000000073 INF: LFT found good score at index 3193 with fwhm value 2.000098. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:57.567 -08 000000105 INF: LFT found best fwhm score 2 in 151 ms
17-02-28 20:20:57.567 -08 000000082 INF: LFT found best fwhm score 2.000872 in 151 ms
17-02-28 20:20:57.567 -08 000000105 INF: LFT found good score at index 6745 with fwhm value 2. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:57.567 -08 000000082 INF: LFT found good score at index 1157 with fwhm value 2.000872. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:57.567 -08 000000073 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.568 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.568 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.568 -08 000000073 INF: ======================================
17-02-28 20:20:57.568 -08 000000082 INF: ======================================
17-02-28 20:20:57.568 -08 000000105 INF: ======================================
17-02-28 20:20:57.569 -08 000000064 INF: LFT found best fwhm score 2.000385 in 152 ms
17-02-28 20:20:57.569 -08 000000064 INF: LFT found good score at index 3185 with fwhm value 2.000385. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:57.570 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.570 -08 000000064 INF: ======================================
17-02-28 20:20:57.571 -08 000000069 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:57.572 -08 000000069 INF: LFT weighted average best Z for bottom surface is at -0.054mm FC:A, C:3,L:7,B
17-02-28 20:20:57.572 -08 000000069 INF: ======================================
17-02-28 20:20:57.574 -08 000000109 INF: ======================================
17-02-28 20:20:57.575 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.575 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:20:57.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:20:57.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:20:57.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:20:57.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494===================
17-02-28 20:20:57.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494===================
17-02-28 20:20:57.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:20:57.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494===================
17-02-28 20:20:57.578 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module..., Waiting for image analysis===================
17-02-28 20:20:57.578 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:20:57.601 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:20:57.601 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:57.601 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:57.601 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:57.602 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:20:57.602 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:57.602 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:20:57.648 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":7,"Tile":2201,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF223","HCSMMF184","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.651 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:57.652 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:57.652 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:57.652 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:57.750 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:57.750 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:57.751 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:20:57.751 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:57.752 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:57.754 -08 000000073 INF: ===================Move Tilt Motor 1===================
17-02-28 20:20:57.754 -08 000000073 INF: Tilt Motor 1: Moving to 5.0845 mm, started at 5.1788 mm, delta = -0.0944 mm
17-02-28 20:20:57.754 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:20:57.756 -08 000000085 INF: ===================Move Tilt Motor 2===================
17-02-28 20:20:57.756 -08 000000085 INF: Tilt Motor 2: Moving to 5.2991 mm, started at 5.2431 mm, delta = 0.0560 mm
17-02-28 20:20:57.756 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:20:57.758 -08 000000089 INF: ===================Move Tilt Motor 3===================
17-02-28 20:20:57.758 -08 000000089 INF: Tilt Motor 3: Moving to 5.3257 mm, started at 5.2708 mm, delta = 0.0550 mm
17-02-28 20:20:57.758 -08 000000089 INF: FPGA: Xmit T3RD\n
17-02-28 20:20:57.849 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":7,"Tile":2202,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF264","HCSMMF199","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.849 -08 000000075 INF: FPGA: Recv T1RD 20388
17-02-28 20:20:57.849 -08 000000075 INF: FPGA: Recv T2RD 20642
17-02-28 20:20:57.849 -08 000000075 INF: FPGA: Recv T3RD 20750
17-02-28 20:20:57.850 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3440 + 2/6
17-02-28 20:20:57.850 -08 000000089 INF: Tilt Motor 3: Encoder: at motor step 3458 + 2/6
17-02-28 20:20:57.850 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3398 + 0/6
17-02-28 20:20:57.850 -08 000000073 INF: Tilt Motor 1: Moving to 20018 encoder counts
17-02-28 20:20:57.850 -08 000000089 INF: Tilt Motor 3: Moving to 20967 encoder counts
17-02-28 20:20:57.850 -08 000000073 INF: FPGA: Xmit T1MOVETO 20018\n
17-02-28 20:20:57.850 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":7,"Tile":2205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF208","HCSMMF236","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.851 -08 000000085 INF: Tilt Motor 2: Moving to 20862 encoder counts
17-02-28 20:20:57.851 -08 000000085 INF: FPGA: Xmit T2MOVETO 20862\n
17-02-28 20:20:57.852 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":7,"Tile":2207,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF193","HCSMMF231","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.853 -08 000000089 INF: FPGA: Xmit T3MOVETO 20967\n
17-02-28 20:20:57.854 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":7,"Tile":2204,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF196","HCSMMF256","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.855 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":7,"Tile":2211,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF209","HCSMMF243","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.857 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":7,"Tile":2210,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF260","HCSMMF203","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.858 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":7,"Tile":2209,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF265","HCSMMF283","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.859 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":7,"Tile":2203,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF276","HCSMMF272","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.865 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":7,"Tile":2212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF204","HCSMMF246","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.867 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":7,"Tile":2219,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF233","HCSMMF250","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.868 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":7,"Tile":2206,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF234","HCSMMF241","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.869 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":7,"Tile":2214,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF191","HCSMMF274","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.872 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":7,"Tile":2208,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF189","HCSMMF185","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.873 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":7,"Tile":2215,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF252","HCSMMF262","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.874 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":7,"Tile":2216,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF177","HCSMMF187","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.876 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":7,"Tile":2218,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF205","HCSMMF215","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.877 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":7,"Tile":2217,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF287","HCSMMF230","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.878 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":7,"Tile":2213,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF181","HCSMMF237","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.879 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":7,"Tile":2221,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF277","HCSMMF259","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.881 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":7,"Tile":2224,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF212","HCSMMF194","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.882 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":7,"Tile":2225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF278","HCSMMF239","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.883 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":7,"Tile":2220,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF267","HCSMMF244","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.884 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":7,"Tile":2222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF195","HCSMMF219","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.885 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":7,"Tile":2226,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF200","HCSMMF269","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.886 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":7,"Tile":2223,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF285","HCSMMF273","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.887 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":7,"Tile":2227,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF270","HCSMMF221","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.890 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":7,"Tile":2228,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF224","HCSMMF217","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.894 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:57.900 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:20:57.991 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:57.991 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:20:58.028 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:58.028 -08 000000053 INF: FPGA: Recv T2MOVETO 36
17-02-28 20:20:58.028 -08 000000053 INF: FPGA: Recv T3MOVETO 35
17-02-28 20:20:58.028 -08 000000053 INF: FPGA: Recv T1MOVETO 61
17-02-28 20:20:58.029 -08 000000089 INF: Tilt Motor 3: To move from 5.271 to 5.326 (0.055 mm) should take 36 steps, but required 35 steps (0.053 mm). Slippage = -0.002 mm (-0.03%)
17-02-28 20:20:58.029 -08 000000073 INF: Tilt Motor 1: To move from 5.179 to 5.084 (-0.094 mm) should take 62 steps, but required 61 steps (0.093 mm). Slippage = -0.002 mm (0.02%)
17-02-28 20:20:58.029 -08 000000085 INF: Tilt Motor 2: To move from 5.243 to 5.299 (0.056 mm) should take 37 steps, but required 36 steps (0.055 mm). Slippage = -0.002 mm (-0.03%)
17-02-28 20:20:58.029 -08 000000089 INF: FPGA: Xmit T3RD\n
17-02-28 20:20:58.030 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:20:58.033 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:20:58.037 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:20:58.089 -08 000000010 INF: FPGA: Recv T3RD 20962
17-02-28 20:20:58.089 -08 000000010 INF: FPGA: Recv T1RD 20021
17-02-28 20:20:58.089 -08 000000010 INF: FPGA: Recv T2RD 20857
17-02-28 20:20:58.089 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3336 + 5/6
17-02-28 20:20:58.089 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:20:58.089 -08 000000089 INF: Tilt Motor 3: Encoder: at motor step 3493 + 4/6
17-02-28 20:20:58.090 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3476 + 1/6
17-02-28 20:20:58.091 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:20:58.092 -08 000000089 INF: FPGA: Xmit T3RD\n
17-02-28 20:20:58.133 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:58.138 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:20:58.153 -08 000000081 INF: FPGA: Recv T1RD 20021
17-02-28 20:20:58.154 -08 000000081 INF: FPGA: Recv T2RD 20857
17-02-28 20:20:58.154 -08 000000081 INF: FPGA: Recv T3RD 20962
17-02-28 20:20:58.154 -08 000000089 INF: Tilt Motor 3: Encoder: at motor step 3493 + 4/6
17-02-28 20:20:58.154 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3476 + 1/6
17-02-28 20:20:58.154 -08 000000089 INF: FPGA: Xmit T3RD\n
17-02-28 20:20:58.154 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3336 + 5/6
17-02-28 20:20:58.155 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:20:58.162 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:20:58.213 -08 000000035 INF: FPGA: Recv T3RD 20962
17-02-28 20:20:58.213 -08 000000035 INF: FPGA: Recv T2RD 20857
17-02-28 20:20:58.213 -08 000000035 INF: FPGA: Recv T1RD 20021
17-02-28 20:20:58.213 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3336 + 5/6
17-02-28 20:20:58.213 -08 000000089 INF: Tilt Motor 3: Encoder: at motor step 3493 + 4/6
17-02-28 20:20:58.213 -08 000000089 INF: Tilt Motor 3: After move to 5.3257, error = -0.0014, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:20:58.213 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3476 + 1/6
17-02-28 20:20:58.213 -08 000000085 INF: Tilt Motor 2: After move to 5.2991, error = -0.0014, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:20:58.213 -08 000000089 INF: Tilt Motor 3: Moved to 5.3243 after 455.3154 ms
17-02-28 20:20:58.213 -08 000000085 INF: Tilt Motor 2: Moved to 5.2977 after 457.465 ms
17-02-28 20:20:58.213 -08 000000073 INF: Tilt Motor 1: After move to 5.0845, error = 0.0009, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:20:58.213 -08 000000073 INF: Tilt Motor 1: Moved to 5.0853 after 459.149 ms
17-02-28 20:20:58.214 -08 000000089 INF: ======================================
17-02-28 20:20:58.214 -08 000000085 INF: ======================================
17-02-28 20:20:58.214 -08 000000073 INF: ======================================
17-02-28 20:20:58.215 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:58.216 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:58.216 -08 000000018 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=5.08445418705215, m2=5.29905181249686, m3=5.32572181249686
17-02-28 20:20:58.222 -08 000000018 INF: Transformed XStagePosition from 25.49393 mm to 25.4939308166504 mm.
17-02-28 20:20:58.224 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:58.230 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:20:58.231 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:20:58.231 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:20:58.231 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:20:58.231 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:20:58.232 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:20:58.235 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:20:58.235 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:20:58.235 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:20:58.275 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:58.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:20:58.276 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:20:58.276 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0740 mm
17-02-28 20:20:58.276 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:20:58.328 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:58.337 -08 000000089 INF: FPGA: Recv ZTRG 
17-02-28 20:20:58.337 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:20:58.402 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:20:58.402 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:20:58.402 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:20:58.464 -08 000000064 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:20:58.464 -08 000000064 INF: FPGA: Recv ZMV 
17-02-28 20:20:58.464 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:20:58.464 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9861 ms
17-02-28 20:20:58.464 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:20:58.526 -08 000000108 INF: FPGA: Recv ZDACR 60292
17-02-28 20:20:58.526 -08 000000018 INF: Z Motor: MoveAndTrigger took 250.3949 ms w/comms
17-02-28 20:20:58.526 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:20:58.526 -08 000000018 INF: Z Motor: MoveAbsStepped took 250.5873 ms
17-02-28 20:20:58.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:20:58.527 -08 000000018 INF: Transformed XStagePosition from 25.49393 mm to 25.4939308166504 mm.
17-02-28 20:20:58.536 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:20:58.536 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:58.536 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:58.536 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:20:58.536 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:20:58.588 -08 000000064 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:58.608 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:20:58.609 -08 000000018 INF: Transformed XStagePosition from 25.49393 mm to 25.4939308166504 mm.
17-02-28 20:20:58.617 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:20:58.617 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:20:58.617 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:58.617 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:58.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:58.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:20:58.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:58.620 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = H_1
17-02-28 20:20:58.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:58.621 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:58.622 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:20:58.622 -08 000000035 INF: ===================MoveEmissionFilters===================
17-02-28 20:20:58.623 -08 000000075 INF: ===================Move X,Y, Parallel===================
17-02-28 20:20:58.623 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:58.623 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:58.623 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:58.623 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:58.623 -08 000000025 INF: ===================Move X Motor without settling===================
17-02-28 20:20:58.623 -08 000000082 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:58.624 -08 000000025 INF: X Motor: Xmit PR VM\n
17-02-28 20:20:58.624 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:58.624 -08 000000082 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8438 mm
17-02-28 20:20:58.624 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:58.624 -08 000000082 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:58.624 -08 000000082 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:58.624 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:58.624 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:58.625 -08 000000073 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:20:58.625 -08 000000069 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:20:58.625 -08 000000105 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:20:58.625 -08 000000085 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:20:58.625 -08 000000109 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:20:58.625 -08 000000066 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:20:58.625 -08 000000081 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:20:58.625 -08 000000073 INF: ======================================
17-02-28 20:20:58.625 -08 000000034 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:20:58.625 -08 000000105 INF: ======================================
17-02-28 20:20:58.626 -08 000000034 INF: ======================================
17-02-28 20:20:58.626 -08 000000069 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:20:58.626 -08 000000081 INF: ======================================
17-02-28 20:20:58.626 -08 000000069 INF: ======================================
17-02-28 20:20:58.626 -08 000000066 INF: ======================================
17-02-28 20:20:58.626 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:58.628 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:58.628 -08 000000087 INF: ======================================
17-02-28 20:20:58.628 -08 000000085 INF: ======================================
17-02-28 20:20:58.628 -08 000000109 INF: ======================================
17-02-28 20:20:58.629 -08 000000078 INF: ======================================
17-02-28 20:20:58.629 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:58.629 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:58.631 -08 000000052 INF: ======================================
17-02-28 20:20:58.631 -08 000000010 INF: ======================================
17-02-28 20:20:58.632 -08 000000035 INF: ======================================
17-02-28 20:20:58.714 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:20:58.714 -08 000000082 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:58.714 -08 000000082 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:58.714 -08 000000025 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:20:58.714 -08 000000025 INF: X Motor: Xmit PR VI\n
17-02-28 20:20:58.776 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:20:58.776 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:58.778 -08 000000025 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:20:58.778 -08 000000025 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:20:58.778 -08 000000025 INF: X Motor: Moving to 25.4939 mm @15.000 mm/sec, started at 23.2896 mm
17-02-28 20:20:58.778 -08 000000025 INF: X Motor: Xmit MA -13724\n
17-02-28 20:20:58.841 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:20:58.841 -08 000000082 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:58.841 -08 000000025 INF: X Motor: Recv MA -13724\r\n>
17-02-28 20:20:58.841 -08 000000082 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:20:58.841 -08 000000082 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:20:58.841 -08 000000025 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:20:58.903 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:20:58.903 -08 000000082 INF: Y Motor: Start the move command
17-02-28 20:20:58.903 -08 000000082 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:58.965 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:20:58.965 -08 000000082 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:20:58.965 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:59.091 -08 000000082 INF: Y Motor: Unshifted Position: 1065916
17-02-28 20:20:59.141 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:59.263 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:59.402 -08 000000082 INF: Y Motor: Unshifted Position: 1776049
17-02-28 20:20:59.452 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:59.466 -08 000000025 INF: X Motor: Xmit PR ER\n
17-02-28 20:20:59.526 -08 000000025 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:20:59.526 -08 000000025 INF: X Motor: Moved to 25.4941 after 684 ms
17-02-28 20:20:59.526 -08 000000025 INF: ======================================
17-02-28 20:20:59.576 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:59.713 -08 000000082 INF: Y Motor: Unshifted Position: 2549401
17-02-28 20:20:59.763 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:59.890 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.026 -08 000000082 INF: Y Motor: Unshifted Position: 3334350
17-02-28 20:21:00.076 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.200 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.336 -08 000000082 INF: Y Motor: Unshifted Position: 4110253
17-02-28 20:21:00.386 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.514 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.650 -08 000000082 INF: Y Motor: Unshifted Position: 4896022
17-02-28 20:21:00.700 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.825 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.960 -08 000000082 INF: Y Motor: Unshifted Position: 5669792
17-02-28 20:21:01.010 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:01.139 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:01.272 -08 000000082 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:21:01.272 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:01.272 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:01.334 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:21:01.334 -08 000000082 INF: Y Motor: Moved to 64.4706 after 2369 ms
17-02-28 20:21:01.334 -08 000000082 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:01.400 -08 000000082 INF: Y Motor: Recv v 4096\r
17-02-28 20:21:01.400 -08 000000082 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:01.400 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:01.459 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:21:01.459 -08 000000082 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:01.459 -08 000000082 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:01.523 -08 000000082 INF: Y Motor: Recv v 402653184\r
17-02-28 20:21:01.523 -08 000000082 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:21:01.523 -08 000000082 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:01.523 -08 000000082 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:01.584 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:21:01.584 -08 000000082 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:01.584 -08 000000082 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:01.584 -08 000000082 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:01.646 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:21:01.646 -08 000000082 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:01.646 -08 000000082 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:01.712 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:21:01.712 -08 000000082 INF: ======================================
17-02-28 20:21:01.713 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:21:01.715 -08 000000075 INF: ======================================
17-02-28 20:21:01.716 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:01.717 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:01.717 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:21:01.717 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:21:01.771 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:21:01.771 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:21:01.834 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:21:01.835 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:21:01.835 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:01.835 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:01.897 -08 000000025 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:21:01.897 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:21:01.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:01.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:01.899 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:21:01.899 -08 000000010 INF: ===================Set YMotor gains for scans===================
17-02-28 20:21:01.899 -08 000000010 INF: ======================================
17-02-28 20:21:01.900 -08 000000053 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:21:01.900 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:21:01.901 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:21:01.902 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:21:01.902 -08 000000053 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:21:01.958 -08 000000081 INF: FPGA: Recv TDIYPOS
17-02-28 20:21:01.958 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:21:01.960 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:21:01.960 -08 000000053 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:21:02.020 -08 000000069 INF: FPGA: Recv TDIYARM2
17-02-28 20:21:02.020 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:21:02.022 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:21:02.023 -08 000000053 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:21:02.024 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:21:02.025 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:21:02.026 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:21:02.027 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:02.398 -08 000000053 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:21:02.398 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:21:02.398 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:02.414 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:21:02.415 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:02.793 -08 000000053 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:21:02.793 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:21:02.793 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:02.808 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:21:02.810 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:21:02.812 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:21:02.815 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:02.816 -08 000000053 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:21:02.816 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:02.819 -08 000000053 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:21:02.819 -08 000000053 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:21:02.819 -08 000000053 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:21:02.819 -08 000000053 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:21:02.832 -08 000000057 INF: FPGA: Recv ZYT 
17-02-28 20:21:02.832 -08 000000053 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:21:02.832 -08 000000053 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:21:02.894 -08 000000033 INF: FPGA: Recv ZARM
17-02-28 20:21:02.894 -08 000000053 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.045 ms
17-02-28 20:21:02.894 -08 000000053 INF: Z Motor: ArmAbsStepped took 74.8331 ms
17-02-28 20:21:02.895 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:02.897 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:21:02.898 -08 000000053 INF: ======================================
17-02-28 20:21:02.900 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:02.901 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:02.901 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:02.902 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:02.902 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:02.904 -08 000000078 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:21:02.904 -08 000000075 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:21:02.904 -08 000000078 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:21:02.904 -08 000000078 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:21:02.904 -08 000000078 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:21:02.904 -08 000000075 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:21:02.904 -08 000000075 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:21:02.904 -08 000000075 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:21:02.904 -08 000000078 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:21:02.907 -08 000000075 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:21:03.270 -08 000000081 INF: FPGA: Recv EX2MV
17-02-28 20:21:03.270 -08 000000078 INF: Excitation Filter 2: Moved -107 steps in 365.9722 ms
17-02-28 20:21:03.270 -08 000000078 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.2004 ms
17-02-28 20:21:03.270 -08 000000078 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.3133 ms
17-02-28 20:21:03.271 -08 000000078 INF: ======================================
17-02-28 20:21:03.352 -08 000000069 INF: FPGA: Recv EX1MV
17-02-28 20:21:03.352 -08 000000075 INF: Excitation Filter 1: Moved -107 steps in 447.9186 ms
17-02-28 20:21:03.352 -08 000000075 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 448.0817 ms
17-02-28 20:21:03.352 -08 000000075 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 448.2097 ms
17-02-28 20:21:03.353 -08 000000075 INF: ======================================
17-02-28 20:21:03.354 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:03.356 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:03.357 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:21:03.357 -08 000000073 INF: ===================Serial===================
17-02-28 20:21:03.357 -08 000000057 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:03.358 -08 000000081 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:03.358 -08 000000081 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:21:03.358 -08 000000025 INF: ===================Camera TDI, Parallel===================
17-02-28 20:21:03.358 -08 000000081 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:03.358 -08 000000081 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:03.358 -08 000000073 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:21:03.359 -08 000000073 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:21:03.359 -08 000000057 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:21:03.359 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:21:03.359 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:21:03.360 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.360 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.360 -08 000000057 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:21:03.361 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.361 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.411 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:21:03.411 -08 000000081 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:03.411 -08 000000081 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:03.473 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:21:03.473 -08 000000081 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:03.510 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.510 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.511 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.511 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.535 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:21:03.535 -08 000000081 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:03.535 -08 000000081 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:21:03.535 -08 000000081 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:21:03.597 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:21:03.597 -08 000000081 INF: Y Motor: Start the move command
17-02-28 20:21:03.597 -08 000000081 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:03.659 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:21:03.659 -08 000000081 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:21:03.659 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:03.660 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.660 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.661 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.661 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.783 -08 000000081 INF: Y Motor: Unshifted Position: 5929033
17-02-28 20:21:03.810 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.810 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.811 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.811 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.833 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:03.960 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:03.960 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:21:03.960 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:21:03.960 -08 000000066 INF: ===================Camera #2 Frame #1===================
17-02-28 20:21:03.961 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:21:03.961 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:21:03.961 -08 000000101 INF: ===================Camera #0 Frame #1===================
17-02-28 20:21:04.096 -08 000000081 INF: Y Motor: Unshifted Position: 5881874
17-02-28 20:21:04.113 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:21:04.113 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:21:04.113 -08 000000066 INF: ===================Camera #2 Frame #3===================
17-02-28 20:21:04.116 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:21:04.116 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:21:04.116 -08 000000101 INF: ===================Camera #0 Frame #3===================
17-02-28 20:21:04.146 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:04.270 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:04.272 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:21:04.272 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:21:04.272 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:21:04.272 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:21:04.272 -08 000000066 INF: ===================Camera #2 Frame #4===================
17-02-28 20:21:04.272 -08 000000101 INF: ===================Camera #0 Frame #4===================
17-02-28 20:21:04.407 -08 000000081 INF: Y Motor: Unshifted Position: 5835328
17-02-28 20:21:04.425 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:04.425 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:04.425 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:04.425 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:04.425 -08 000000066 INF: ===================Camera #2 Frame #5===================
17-02-28 20:21:04.425 -08 000000101 INF: ===================Camera #0 Frame #5===================
17-02-28 20:21:04.457 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:04.470 -08 000000082 INF: FPGA: Recv ZWAIT 
17-02-28 20:21:04.470 -08 000000082 INF: FPGA: Recv TDIYWAIT
17-02-28 20:21:04.470 -08 000000057 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:04.471 -08 000000073 INF: ===================Serial===================
17-02-28 20:21:04.472 -08 000000057 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:21:04.472 -08 000000073 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:21:04.473 -08 000000073 INF: ===================Serial===================
17-02-28 20:21:04.473 -08 000000085 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:21:04.474 -08 000000033 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:21:04.474 -08 000000085 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:21:04.474 -08 000000085 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:21:04.474 -08 000000085 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:21:04.474 -08 000000033 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:21:04.474 -08 000000033 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:21:04.474 -08 000000085 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:21:04.474 -08 000000033 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:21:04.474 -08 000000073 INF: ======================================
17-02-28 20:21:04.475 -08 000000033 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:21:04.578 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:21:04.578 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:21:04.578 -08 000000101 INF: ===================Camera #0 Frame #6===================
17-02-28 20:21:04.579 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:21:04.579 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:21:04.579 -08 000000066 INF: ===================Camera #2 Frame #6===================
17-02-28 20:21:04.581 -08 000000101 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:21:04.582 -08 000000066 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:21:04.582 -08 000000101 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:04.583 -08 000000066 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:04.584 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:04.608 -08 000000066 INF: Camera #2 ReleaseBuffer
17-02-28 20:21:04.608 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:21:04.610 -08 000000066 INF: ======================================
17-02-28 20:21:04.632 -08 000000101 INF: Camera #0 ReleaseBuffer
17-02-28 20:21:04.632 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:21:04.633 -08 000000101 INF: ======================================
17-02-28 20:21:04.635 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:21:04.636 -08 000000025 INF: ======================================
17-02-28 20:21:04.722 -08 000000081 INF: Y Motor: Unshifted Position: 5790762
17-02-28 20:21:04.772 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:04.842 -08 000000010 INF: FPGA: Recv EX1MV
17-02-28 20:21:04.842 -08 000000010 INF: FPGA: Recv EX2MV
17-02-28 20:21:04.842 -08 000000085 INF: Excitation Filter 1: Moved 107 steps in 368.1996 ms
17-02-28 20:21:04.842 -08 000000033 INF: Excitation Filter 2: Moved 107 steps in 368.0301 ms
17-02-28 20:21:04.842 -08 000000033 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 368.2316 ms
17-02-28 20:21:04.842 -08 000000033 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 368.3613 ms
17-02-28 20:21:04.842 -08 000000085 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 368.3494 ms
17-02-28 20:21:04.842 -08 000000085 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 368.757 ms
17-02-28 20:21:04.843 -08 000000033 INF: ======================================
17-02-28 20:21:04.843 -08 000000085 INF: ======================================
17-02-28 20:21:04.844 -08 000000057 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:04.846 -08 000000057 INF: ======================================
17-02-28 20:21:04.910 -08 000000081 INF: Y Motor: Unshifted Position: 5790743
17-02-28 20:21:04.910 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:04.910 -08 000000081 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:04.972 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:21:04.972 -08 000000081 INF: Y Motor: Moved to 62.9074 after 1312 ms
17-02-28 20:21:04.972 -08 000000081 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:05.031 -08 000000081 INF: Y Motor: Recv v 4097\r
17-02-28 20:21:05.031 -08 000000081 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:05.031 -08 000000081 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:05.096 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:21:05.096 -08 000000081 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:05.096 -08 000000081 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:05.160 -08 000000081 INF: Y Motor: Recv v 134217728\r
17-02-28 20:21:05.160 -08 000000081 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:21:05.160 -08 000000081 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:05.160 -08 000000081 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:05.222 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:21:05.222 -08 000000081 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:05.222 -08 000000081 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:05.222 -08 000000081 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:05.281 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:21:05.281 -08 000000081 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:05.281 -08 000000081 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:05.344 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:21:05.344 -08 000000081 INF: ======================================
17-02-28 20:21:05.345 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:05.346 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:05.347 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.347 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:21:05.406 -08 000000035 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:21:05.406 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:05.468 -08 000000051 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:21:05.468 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:21:05.530 -08 000000057 INF: FPGA: Recv ZADCR 2423
17-02-28 20:21:05.530 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:21:05.530 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:21:05.593 -08 000000036 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:21:05.593 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:21:05.593 -08 000000018 INF: TDIScan finished after 6984.6835 ms
17-02-28 20:21:05.593 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:21:05.593 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:21:05.593 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:21:05.656 -08 000000075 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:21:05.657 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.658 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.659 -08 000000033 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:21:05.659 -08 000000069 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:21:05.659 -08 000000030 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:21:05.659 -08 000000033 INF: ======================================
17-02-28 20:21:05.659 -08 000000030 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:21:05.659 -08 000000030 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:21:05.660 -08 000000069 INF: ======================================
17-02-28 20:21:05.720 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:21:05.720 -08 000000030 INF: ======================================
17-02-28 20:21:05.721 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.722 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.723 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:21:05.772 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.772 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:21:05.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:21:05.863 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.863 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:21:05.895 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.895 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:21:05.896 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:21:05.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:21:05.904 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:21:05.905 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:21:05.905 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:21:06.526 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:21:06.549 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0576110928033664Best Z position at top surface = -0.129137620725494Best Z position at top surface + compensator offset = -0.106437620725494 C:3,L:8,B
17-02-28 20:21:06.551 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.129137620725494
17-02-28 20:21:06.551 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.76527
17-02-28 20:21:06.551 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0576110928033664
17-02-28 20:21:06.551 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.42096
17-02-28 20:21:06.551 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0576110928033664.
17-02-28 20:21:06.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:21:06.684 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:21:06.684 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:21:06.717 -08 000000010 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:06.717 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:21:06.719 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:06.719 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:06.720 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:06.720 -08 000000030 INF: ===================Move Tilt Motor 1===================
17-02-28 20:21:06.721 -08 000000081 INF: ===================Move Tilt Motor 2===================
17-02-28 20:21:06.721 -08 000000030 INF: Tilt Motor 1: Moving to 5.0723 mm, started at 5.0853 mm, delta = -0.0130 mm
17-02-28 20:21:06.721 -08 000000030 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:06.721 -08 000000108 INF: ===================Move Tilt Motor 3===================
17-02-28 20:21:06.721 -08 000000081 INF: Tilt Motor 2: Moving to 5.3062 mm, started at 5.2977 mm, delta = 0.0085 mm
17-02-28 20:21:06.721 -08 000000108 INF: Tilt Motor 3: Moving to 5.3329 mm, started at 5.3243 mm, delta = 0.0085 mm
17-02-28 20:21:06.722 -08 000000081 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:06.724 -08 000000108 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:06.779 -08 000000073 INF: FPGA: Recv T1RD 20021
17-02-28 20:21:06.779 -08 000000073 INF: FPGA: Recv T2RD 20857
17-02-28 20:21:06.779 -08 000000073 INF: FPGA: Recv T3RD 20961
17-02-28 20:21:06.779 -08 000000081 INF: Tilt Motor 2: Encoder: at motor step 3476 + 1/6
17-02-28 20:21:06.779 -08 000000081 INF: Tilt Motor 2: Moving to 20891 encoder counts
17-02-28 20:21:06.779 -08 000000081 INF: FPGA: Xmit T2MOVETO 20891\n
17-02-28 20:21:06.779 -08 000000030 INF: Tilt Motor 1: Encoder: at motor step 3336 + 5/6
17-02-28 20:21:06.779 -08 000000030 INF: Tilt Motor 1: Moving to 19970 encoder counts
17-02-28 20:21:06.779 -08 000000108 INF: Tilt Motor 3: Encoder: at motor step 3493 + 3/6
17-02-28 20:21:06.779 -08 000000108 INF: Tilt Motor 3: Moving to 20996 encoder counts
17-02-28 20:21:06.780 -08 000000108 INF: FPGA: Xmit T3MOVETO 20996\n
17-02-28 20:21:06.782 -08 000000030 INF: FPGA: Xmit T1MOVETO 19970\n
17-02-28 20:21:06.903 -08 000000051 INF: FPGA: Recv T2MOVETO 5
17-02-28 20:21:06.903 -08 000000051 INF: FPGA: Recv T3MOVETO 5
17-02-28 20:21:06.903 -08 000000051 INF: FPGA: Recv T1MOVETO 8
17-02-28 20:21:06.903 -08 000000030 INF: Tilt Motor 1: To move from 5.085 to 5.072 (-0.013 mm) should take 8 steps, but required 8 steps (0.012 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:21:06.903 -08 000000108 INF: Tilt Motor 3: To move from 5.324 to 5.333 (0.009 mm) should take 6 steps, but required 5 steps (0.008 mm). Slippage = -0.002 mm (-0.18%)
17-02-28 20:21:06.903 -08 000000081 INF: Tilt Motor 2: To move from 5.298 to 5.306 (0.009 mm) should take 6 steps, but required 5 steps (0.008 mm). Slippage = -0.002 mm (-0.18%)
17-02-28 20:21:06.903 -08 000000030 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:06.904 -08 000000108 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:06.906 -08 000000081 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:06.965 -08 000000086 INF: FPGA: Recv T1RD 19973
17-02-28 20:21:06.965 -08 000000086 INF: FPGA: Recv T3RD 20991
17-02-28 20:21:06.965 -08 000000086 INF: FPGA: Recv T2RD 20887
17-02-28 20:21:06.965 -08 000000081 INF: Tilt Motor 2: Encoder: at motor step 3481 + 1/6
17-02-28 20:21:06.965 -08 000000108 INF: Tilt Motor 3: Encoder: at motor step 3498 + 3/6
17-02-28 20:21:06.965 -08 000000081 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:06.965 -08 000000030 INF: Tilt Motor 1: Encoder: at motor step 3328 + 5/6
17-02-28 20:21:06.966 -08 000000030 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:06.968 -08 000000108 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:07.027 -08 000000045 INF: FPGA: Recv T2RD 20887
17-02-28 20:21:07.027 -08 000000045 INF: FPGA: Recv T1RD 19973
17-02-28 20:21:07.027 -08 000000045 INF: FPGA: Recv T3RD 20991
17-02-28 20:21:07.027 -08 000000030 INF: Tilt Motor 1: Encoder: at motor step 3328 + 5/6
17-02-28 20:21:07.027 -08 000000081 INF: Tilt Motor 2: Encoder: at motor step 3481 + 1/6
17-02-28 20:21:07.027 -08 000000108 INF: Tilt Motor 3: Encoder: at motor step 3498 + 3/6
17-02-28 20:21:07.027 -08 000000030 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:07.028 -08 000000081 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:07.030 -08 000000108 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:07.089 -08 000000075 INF: FPGA: Recv T1RD 19973
17-02-28 20:21:07.089 -08 000000075 INF: FPGA: Recv T2RD 20887
17-02-28 20:21:07.089 -08 000000075 INF: FPGA: Recv T3RD 20991
17-02-28 20:21:07.089 -08 000000108 INF: Tilt Motor 3: Encoder: at motor step 3498 + 3/6
17-02-28 20:21:07.089 -08 000000081 INF: Tilt Motor 2: Encoder: at motor step 3481 + 1/6
17-02-28 20:21:07.089 -08 000000108 INF: Tilt Motor 3: After move to 5.3329, error = -0.0012, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:07.089 -08 000000081 INF: Tilt Motor 2: After move to 5.3062, error = -0.0009, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:07.089 -08 000000081 INF: Tilt Motor 2: Moved to 5.3053 after 368.5718 ms
17-02-28 20:21:07.089 -08 000000108 INF: Tilt Motor 3: Moved to 5.3317 after 368.5186 ms
17-02-28 20:21:07.090 -08 000000081 INF: ======================================
17-02-28 20:21:07.090 -08 000000108 INF: ======================================
17-02-28 20:21:07.090 -08 000000030 INF: Tilt Motor 1: Encoder: at motor step 3328 + 5/6
17-02-28 20:21:07.090 -08 000000030 INF: Tilt Motor 1: After move to 5.0723, error = 0.0008, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:07.090 -08 000000030 INF: Tilt Motor 1: Moved to 5.0731 after 369.5089 ms
17-02-28 20:21:07.090 -08 000000030 INF: ======================================
17-02-28 20:21:07.091 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:07.092 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:07.093 -08 000000018 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=5.07232517203988, m2=5.30622331841057, m3=5.33289331841057
17-02-28 20:21:07.093 -08 000000018 INF: ETF Best Z: -0.05761109 mm (15102 DAC)
17-02-28 20:21:07.093 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:07.094 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:07.094 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:21:07.094 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:07.095 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:07.536 -08 000000018 INF: Swath 1 position calculated to be: {X=24.92233, Y=39.70494} from estimated center X= 25.417, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:21:07.536 -08 000000018 INF: Swath 2 position calculated to be: {X=26.03033, Y=39.70494} from estimated center X= 25.417, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:21:07.542 -08 000000018 INF: Swath 0: Converted transform from (137.8255, 6.198289) pixels to (0.04761, 0.00207) mm.
17-02-28 20:21:07.547 -08 000000018 INF: Swath 1: Converted transform from (110.5954, 7.487943) pixels to (0.038295, 0.002415) mm.
17-02-28 20:21:07.548 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494===================
17-02-28 20:21:07.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494===================
17-02-28 20:21:07.549 -08 000000018 INF: Transformed XStagePosition from 24.92233 mm to 24.9699446707964 mm.
17-02-28 20:21:07.561 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4970157396756 mm.
17-02-28 20:21:07.561 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2970157396756 mm.
17-02-28 20:21:07.561 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3877657396756 mm.
17-02-28 20:21:07.563 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:07.563 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:21:07.563 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:07.563 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = H_1
17-02-28 20:21:07.569 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:07.569 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:07.570 -08 000000039 INF: ===================MoveEmissionFilters===================
17-02-28 20:21:07.570 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:07.570 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:21:07.571 -08 000000075 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:07.571 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:07.571 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:21:07.571 -08 000000069 INF: ===================Move X,Y, Parallel===================
17-02-28 20:21:07.571 -08 000000105 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:21:07.571 -08 000000108 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:07.571 -08 000000105 INF: Z Motor: Moving to -0.0776 mm, started at -0.0100 mm
17-02-28 20:21:07.571 -08 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:07.571 -08 000000105 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:21:07.571 -08 000000075 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:07.572 -08 000000109 INF: ===================Move X Motor without settling===================
17-02-28 20:21:07.572 -08 000000108 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:07.572 -08 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:07.572 -08 000000101 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:07.572 -08 000000109 INF: X Motor: Xmit PR VM\n
17-02-28 20:21:07.572 -08 000000101 INF: Y Motor: Moving to 64.4970 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:21:07.572 -08 000000101 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:07.572 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:07.572 -08 000000066 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:21:07.572 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:07.572 -08 000000038 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:21:07.573 -08 000000077 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:21:07.573 -08 000000078 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:21:07.573 -08 000000066 INF: ======================================
17-02-28 20:21:07.573 -08 000000077 INF: ======================================
17-02-28 20:21:07.573 -08 000000085 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:21:07.573 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:21:07.573 -08 000000078 INF: ======================================
17-02-28 20:21:07.574 -08 000000036 INF: ======================================
17-02-28 20:21:07.574 -08 000000085 INF: ======================================
17-02-28 20:21:07.574 -08 000000108 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:07.575 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:07.575 -08 000000038 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:21:07.575 -08 000000072 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:21:07.575 -08 000000010 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:21:07.576 -08 000000038 INF: ======================================
17-02-28 20:21:07.576 -08 000000072 INF: ======================================
17-02-28 20:21:07.576 -08 000000010 INF: ======================================
17-02-28 20:21:07.576 -08 000000047 INF: ======================================
17-02-28 20:21:07.577 -08 000000075 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:07.577 -08 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:07.578 -08 000000075 INF: ======================================
17-02-28 20:21:07.578 -08 000000081 INF: ======================================
17-02-28 20:21:07.578 -08 000000108 INF: ======================================
17-02-28 20:21:07.579 -08 000000039 INF: ======================================
17-02-28 20:21:07.589 -08 000000090 INF: FPGA: Recv ZTRG 
17-02-28 20:21:07.589 -08 000000105 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:21:07.651 -08 000000047 INF: FPGA: Recv ZYT 
17-02-28 20:21:07.651 -08 000000105 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:21:07.651 -08 000000105 INF: FPGA: Xmit ZMV 20345\n
17-02-28 20:21:07.653 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:07.653 -08 000000101 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:07.653 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:07.653 -08 000000109 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:21:07.653 -08 000000109 INF: X Motor: Xmit PR VI\n
17-02-28 20:21:07.713 -08 000000045 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:21:07.713 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:21:07.715 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:07.715 -08 000000109 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:21:07.715 -08 000000109 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:21:07.715 -08 000000109 INF: X Motor: Moving to 24.9699 mm @15.000 mm/sec, started at 25.4941 mm
17-02-28 20:21:07.715 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:07.715 -08 000000109 INF: X Motor: Xmit MA -13939\n
17-02-28 20:21:07.778 -08 000000087 INF: FPGA: Recv ZMV 
17-02-28 20:21:07.778 -08 000000105 INF: Z Motor: MoveAndTrigger 'ZMV' command took 127.0242 ms
17-02-28 20:21:07.778 -08 000000105 INF: FPGA: Xmit ZDACR\n
17-02-28 20:21:07.780 -08 000000109 INF: X Motor: Recv MA -13939\r\n>
17-02-28 20:21:07.780 -08 000000109 INF: X Motor: WaitUntilStopped 60035
17-02-28 20:21:07.781 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:07.781 -08 000000101 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:07.781 -08 000000101 INF: Y Motor: Set target position to 5949702 encoder counts
17-02-28 20:21:07.781 -08 000000101 INF: Y Motor: Xmit s r0xca 5949702\r
17-02-28 20:21:07.840 -08 000000060 INF: FPGA: Recv ZDACR 20345
17-02-28 20:21:07.840 -08 000000105 INF: Z Motor: MoveAndTrigger took 269.217 ms w/comms
17-02-28 20:21:07.840 -08 000000105 INF: Z Motor: After move to -0.0776, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:07.840 -08 000000105 INF: Z Motor: MoveAbsStepped took 269.3774 ms
17-02-28 20:21:07.841 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:07.842 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:07.842 -08 000000101 INF: Y Motor: Start the move command
17-02-28 20:21:07.842 -08 000000101 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:07.842 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:21:07.843 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:21:07.843 -08 000000075 INF: ===================Camera Arm TDI===================
17-02-28 20:21:07.844 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:07.844 -08 000000075 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:07.844 -08 000000010 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:21:07.845 -08 000000010 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:07.845 -08 000000075 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:07.845 -08 000000010 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:21:07.902 -08 000000087 INF: FPGA: Recv ZSEL 
17-02-28 20:21:07.902 -08 000000010 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:07.903 -08 000000010 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:21:07.904 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:07.904 -08 000000101 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:21:07.904 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:07.964 -08 000000034 INF: FPGA: Recv TDIBB
17-02-28 20:21:07.964 -08 000000010 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:07.966 -08 000000010 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:21:07.966 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:07.968 -08 000000010 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:21:07.968 -08 000000010 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:21:07.968 -08 000000010 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:21:08.026 -08 000000086 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:08.026 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:08.028 -08 000000101 INF: Y Motor: Unshifted Position: 5872246
17-02-28 20:21:08.028 -08 000000010 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:21:08.028 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:08.030 -08 000000010 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:21:08.030 -08 000000010 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:21:08.030 -08 000000010 INF: Z Motor: Arming to move to -0.0376 mm
17-02-28 20:21:08.030 -08 000000010 INF: FPGA: Xmit ZYT 6429702 4\n
17-02-28 20:21:08.078 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:08.088 -08 000000034 INF: FPGA: Recv ZYT 
17-02-28 20:21:08.088 -08 000000010 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6372246 enc / 63.722 mm / ) = 6429702 enc / 64.297 mm
17-02-28 20:21:08.088 -08 000000010 INF: FPGA: Xmit ZARM 9859\n
17-02-28 20:21:08.150 -08 000000086 INF: FPGA: Recv ZARM
17-02-28 20:21:08.150 -08 000000010 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9606 ms
17-02-28 20:21:08.150 -08 000000010 INF: Z Motor: ArmAbsStepped took 119.8488 ms
17-02-28 20:21:08.150 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:08.152 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:21:08.153 -08 000000010 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:21:08.153 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:21:08.155 -08 000000010 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:21:08.155 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:21:08.157 -08 000000010 INF: ======================================
17-02-28 20:21:08.202 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:08.217 -08 000000109 INF: X Motor: Xmit PR ER\n
17-02-28 20:21:08.279 -08 000000109 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:21:08.279 -08 000000109 INF: X Motor: Moved to 24.9692 after 499 ms
17-02-28 20:21:08.279 -08 000000109 INF: ======================================
17-02-28 20:21:08.342 -08 000000101 INF: Y Motor: Unshifted Position: 5949703
17-02-28 20:21:08.342 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:08.342 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:08.403 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:08.403 -08 000000101 INF: Y Motor: Moved to 64.4970 after 499 ms
17-02-28 20:21:08.403 -08 000000101 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:08.466 -08 000000101 INF: Y Motor: Recv v 4096\r
17-02-28 20:21:08.466 -08 000000101 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:08.466 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:08.527 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:08.527 -08 000000101 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:08.527 -08 000000101 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:08.589 -08 000000101 INF: Y Motor: Recv v 402653184\r
17-02-28 20:21:08.589 -08 000000101 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:21:08.589 -08 000000101 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:08.589 -08 000000101 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:08.651 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:08.651 -08 000000101 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:08.651 -08 000000101 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:08.651 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:08.716 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:08.716 -08 000000101 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:08.716 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:08.778 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:08.778 -08 000000101 INF: ======================================
17-02-28 20:21:08.779 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:21:08.780 -08 000000069 INF: ======================================
17-02-28 20:21:08.836 -08 000000075 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:21:08.836 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:21:08.836 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:08.851 -08 000000075 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:08.853 -08 000000075 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:09.914 -08 000000075 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:21:09.914 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:21:09.914 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:09.929 -08 000000075 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:09.931 -08 000000075 INF: ===================Camera Arm TDI===================
17-02-28 20:21:09.932 -08 000000075 INF: ======================================
17-02-28 20:21:09.933 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:09.934 -08 000000105 INF: ======================================
17-02-28 20:21:09.935 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:09.936 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:09.936 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:21:09.936 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:21:10.025 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:21:10.025 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:21:10.087 -08 000000101 INF: FPGA: Recv ZFREQCL
17-02-28 20:21:10.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:21:10.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:10.087 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:10.149 -08 000000075 INF: FPGA: Recv TDIYERD 6449703
17-02-28 20:21:10.149 -08 000000018 INF: Before scan, Y encoder from FPGA = 6449703 counts (64.497 mm)
17-02-28 20:21:10.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:10.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:10.150 -08 000000045 INF: ===================TDI FPGA Arm===================
17-02-28 20:21:10.150 -08 000000057 INF: ===================Set YMotor gains for scans===================
17-02-28 20:21:10.151 -08 000000057 INF: ======================================
17-02-28 20:21:10.151 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:10.152 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:21:10.152 -08 000000045 INF: FPGA: Xmit TDIYPOS 6338777\n
17-02-28 20:21:10.211 -08 000000090 INF: FPGA: Recv TDIYPOS
17-02-28 20:21:10.211 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:10.212 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:21:10.213 -08 000000045 INF: FPGA: Xmit TDIYARM3 139264 6429702 1 1\n
17-02-28 20:21:10.273 -08 000000081 INF: FPGA: Recv TDIYARM3
17-02-28 20:21:10.273 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:10.274 -08 000000045 INF: ===================TDI FPGA Arm===================
17-02-28 20:21:10.275 -08 000000045 INF: ======================================
17-02-28 20:21:10.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:10.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:10.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:10.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:10.278 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:10.279 -08 000000030 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:21:10.279 -08 000000051 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:21:10.279 -08 000000030 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:21:10.279 -08 000000030 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:21:10.279 -08 000000030 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:21:10.279 -08 000000051 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:21:10.279 -08 000000051 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:21:10.279 -08 000000051 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:21:10.279 -08 000000030 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:21:10.282 -08 000000051 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:21:10.648 -08 000000034 INF: FPGA: Recv EX2MV
17-02-28 20:21:10.648 -08 000000034 INF: FPGA: Recv EX1MV
17-02-28 20:21:10.648 -08 000000051 INF: Excitation Filter 1: Moved -107 steps in 368.76 ms
17-02-28 20:21:10.648 -08 000000030 INF: Excitation Filter 2: Moved -107 steps in 368.9239 ms
17-02-28 20:21:10.648 -08 000000030 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.0121 ms
17-02-28 20:21:10.648 -08 000000030 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.0763 ms
17-02-28 20:21:10.648 -08 000000051 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.8885 ms
17-02-28 20:21:10.648 -08 000000051 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.077 ms
17-02-28 20:21:10.648 -08 000000030 INF: ======================================
17-02-28 20:21:10.648 -08 000000051 INF: ======================================
17-02-28 20:21:10.649 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:10.650 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:10.651 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:21:10.651 -08 000000090 INF: ===================FPGA Z Wait===================
17-02-28 20:21:10.651 -08 000000069 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:10.651 -08 000000090 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:21:10.651 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:10.652 -08 000000069 INF: Y Motor: Moving to 14.8487 mm @6.500 mm/sec, started at 64.4970 mm
17-02-28 20:21:10.652 -08 000000025 INF: ===================Camera TDI, Parallel===================
17-02-28 20:21:10.652 -08 000000069 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:10.652 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:10.652 -08 000000038 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:21:10.653 -08 000000038 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:21:10.653 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:21:10.653 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:21:10.654 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:10.654 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:10.655 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:10.655 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:10.712 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:21:10.712 -08 000000069 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:10.712 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:10.774 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:21:10.774 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:10.805 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:10.805 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:10.805 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:10.805 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:10.836 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:21:10.836 -08 000000069 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:10.836 -08 000000069 INF: Y Motor: Set target position to 984868 encoder counts
17-02-28 20:21:10.836 -08 000000069 INF: Y Motor: Xmit s r0xca 984868\r
17-02-28 20:21:10.898 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:21:10.898 -08 000000069 INF: Y Motor: Start the move command
17-02-28 20:21:10.898 -08 000000069 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:10.955 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:10.955 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:10.955 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:10.955 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:10.959 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:21:10.959 -08 000000069 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:21:10.959 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.020 -08 000000064 INF: FPGA: Recv ZWAIT 
17-02-28 20:21:11.020 -08 000000090 INF: ======================================
17-02-28 20:21:11.087 -08 000000069 INF: Y Motor: Unshifted Position: 5887198
17-02-28 20:21:11.105 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:11.105 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:11.105 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:11.105 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:11.105 -08 000000089 INF: ===================Camera #0 Frame #5===================
17-02-28 20:21:11.105 -08 000000033 INF: ===================Camera #2 Frame #5===================
17-02-28 20:21:11.137 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.261 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.272 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:21:11.272 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:21:11.272 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:21:11.272 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:21:11.272 -08 000000033 INF: ===================Camera #2 Frame #11===================
17-02-28 20:21:11.272 -08 000000089 INF: ===================Camera #0 Frame #11===================
17-02-28 20:21:11.398 -08 000000069 INF: Y Motor: Unshifted Position: 5684402
17-02-28 20:21:11.440 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:21:11.440 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:21:11.440 -08 000000089 INF: ===================Camera #0 Frame #17===================
17-02-28 20:21:11.441 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:21:11.441 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:21:11.441 -08 000000033 INF: ===================Camera #2 Frame #17===================
17-02-28 20:21:11.448 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.574 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.608 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:21:11.608 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:21:11.608 -08 000000089 INF: ===================Camera #0 Frame #23===================
17-02-28 20:21:11.610 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:21:11.610 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:21:11.610 -08 000000033 INF: ===================Camera #2 Frame #23===================
17-02-28 20:21:11.709 -08 000000069 INF: Y Motor: Unshifted Position: 5481386
17-02-28 20:21:11.759 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.776 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:21:11.776 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:21:11.776 -08 000000089 INF: ===================Camera #0 Frame #29===================
17-02-28 20:21:11.779 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:21:11.779 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:21:11.779 -08 000000033 INF: ===================Camera #2 Frame #29===================
17-02-28 20:21:11.886 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.944 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:21:11.944 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:21:11.944 -08 000000089 INF: ===================Camera #0 Frame #35===================
17-02-28 20:21:11.948 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:21:11.948 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:21:11.948 -08 000000033 INF: ===================Camera #2 Frame #36===================
17-02-28 20:21:12.022 -08 000000069 INF: Y Motor: Unshifted Position: 5277929
17-02-28 20:21:12.072 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:12.112 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:21:12.112 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:21:12.112 -08 000000089 INF: ===================Camera #0 Frame #42===================
17-02-28 20:21:12.121 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:21:12.121 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:21:12.121 -08 000000033 INF: ===================Camera #2 Frame #42===================
17-02-28 20:21:12.198 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:12.284 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:21:12.284 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:21:12.284 -08 000000089 INF: ===================Camera #0 Frame #48===================
17-02-28 20:21:12.290 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:21:12.290 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:21:12.290 -08 000000033 INF: ===================Camera #2 Frame #48===================
17-02-28 20:21:12.335 -08 000000069 INF: Y Motor: Unshifted Position: 5076216
17-02-28 20:21:12.385 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:12.452 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:21:12.452 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:21:12.452 -08 000000089 INF: ===================Camera #0 Frame #54===================
17-02-28 20:21:12.459 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:21:12.459 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:21:12.459 -08 000000033 INF: ===================Camera #2 Frame #54===================
17-02-28 20:21:12.509 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:12.620 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:21:12.620 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:21:12.620 -08 000000089 INF: ===================Camera #0 Frame #60===================
17-02-28 20:21:12.628 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:21:12.628 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:21:12.628 -08 000000033 INF: ===================Camera #2 Frame #61===================
17-02-28 20:21:12.645 -08 000000069 INF: Y Motor: Unshifted Position: 4872765
17-02-28 20:21:12.695 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:12.789 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:21:12.789 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:21:12.789 -08 000000089 INF: ===================Camera #0 Frame #67===================
17-02-28 20:21:12.801 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:21:12.801 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:21:12.801 -08 000000033 INF: ===================Camera #2 Frame #67===================
17-02-28 20:21:12.822 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:12.958 -08 000000069 INF: Y Motor: Unshifted Position: 4667802
17-02-28 20:21:12.961 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:21:12.961 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:21:12.961 -08 000000089 INF: ===================Camera #0 Frame #73===================
17-02-28 20:21:12.971 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:21:12.971 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:21:12.971 -08 000000033 INF: ===================Camera #2 Frame #73===================
17-02-28 20:21:13.008 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.129 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:21:13.129 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:21:13.129 -08 000000089 INF: ===================Camera #0 Frame #79===================
17-02-28 20:21:13.132 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.141 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:21:13.141 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:21:13.141 -08 000000033 INF: ===================Camera #2 Frame #80===================
17-02-28 20:21:13.271 -08 000000069 INF: Y Motor: Unshifted Position: 4467590
17-02-28 20:21:13.298 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:21:13.298 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:21:13.298 -08 000000089 INF: ===================Camera #0 Frame #85===================
17-02-28 20:21:13.314 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:21:13.314 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:21:13.314 -08 000000033 INF: ===================Camera #2 Frame #86===================
17-02-28 20:21:13.321 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.445 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.467 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:21:13.467 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:21:13.467 -08 000000089 INF: ===================Camera #0 Frame #92===================
17-02-28 20:21:13.484 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:21:13.484 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:21:13.484 -08 000000033 INF: ===================Camera #2 Frame #92===================
17-02-28 20:21:13.581 -08 000000069 INF: Y Motor: Unshifted Position: 4263928
17-02-28 20:21:13.631 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.639 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:21:13.639 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:21:13.639 -08 000000089 INF: ===================Camera #0 Frame #98===================
17-02-28 20:21:13.654 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:21:13.654 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:21:13.654 -08 000000033 INF: ===================Camera #2 Frame #98===================
17-02-28 20:21:13.758 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.808 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:21:13.808 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:21:13.808 -08 000000089 INF: ===================Camera #0 Frame #104===================
17-02-28 20:21:13.824 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:21:13.824 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:21:13.824 -08 000000033 INF: ===================Camera #2 Frame #105===================
17-02-28 20:21:13.894 -08 000000069 INF: Y Motor: Unshifted Position: 4060465
17-02-28 20:21:13.944 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.976 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:21:13.976 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:21:13.976 -08 000000089 INF: ===================Camera #0 Frame #110===================
17-02-28 20:21:13.998 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:21:13.998 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:21:13.998 -08 000000033 INF: ===================Camera #2 Frame #111===================
17-02-28 20:21:14.068 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:14.144 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 115, frameCount = 116.
17-02-28 20:21:14.144 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 116
17-02-28 20:21:14.144 -08 000000089 INF: ===================Camera #0 Frame #116===================
17-02-28 20:21:14.169 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:21:14.169 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:21:14.169 -08 000000033 INF: ===================Camera #2 Frame #117===================
17-02-28 20:21:14.207 -08 000000069 INF: Y Motor: Unshifted Position: 3858753
17-02-28 20:21:14.257 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:14.314 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:21:14.314 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:21:14.314 -08 000000089 INF: ===================Camera #0 Frame #123===================
17-02-28 20:21:14.340 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:21:14.340 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:21:14.340 -08 000000033 INF: ===================Camera #2 Frame #124===================
17-02-28 20:21:14.381 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:14.487 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:21:14.487 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:21:14.487 -08 000000089 INF: ===================Camera #0 Frame #129===================
17-02-28 20:21:14.514 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:21:14.514 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:21:14.514 -08 000000033 INF: ===================Camera #2 Frame #130===================
17-02-28 20:21:14.517 -08 000000069 INF: Y Motor: Unshifted Position: 3655303
17-02-28 20:21:14.567 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:14.657 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:21:14.657 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:21:14.657 -08 000000089 INF: ===================Camera #0 Frame #135===================
17-02-28 20:21:14.685 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:21:14.685 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:21:14.685 -08 000000033 INF: ===================Camera #2 Frame #136===================
17-02-28 20:21:14.694 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:14.826 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:21:14.826 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:21:14.826 -08 000000089 INF: ===================Camera #0 Frame #142===================
17-02-28 20:21:14.830 -08 000000069 INF: Y Motor: Unshifted Position: 3450330
17-02-28 20:21:14.856 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:21:14.856 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:21:14.856 -08 000000033 INF: ===================Camera #2 Frame #143===================
17-02-28 20:21:14.880 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:14.999 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:21:14.999 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:21:14.999 -08 000000089 INF: ===================Camera #0 Frame #148===================
17-02-28 20:21:15.004 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:15.030 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:21:15.046 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:21:15.047 -08 000000033 INF: ===================Camera #2 Frame #150===================
17-02-28 20:21:15.143 -08 000000069 INF: Y Motor: Unshifted Position: 3249272
17-02-28 20:21:15.169 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:21:15.169 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:21:15.169 -08 000000089 INF: ===================Camera #0 Frame #154===================
17-02-28 20:21:15.193 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:15.221 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:21:15.221 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:21:15.221 -08 000000033 INF: ===================Camera #2 Frame #156===================
17-02-28 20:21:15.317 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:15.339 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:21:15.339 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:21:15.339 -08 000000089 INF: ===================Camera #0 Frame #160===================
17-02-28 20:21:15.392 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:21:15.392 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:21:15.392 -08 000000033 INF: ===================Camera #2 Frame #162===================
17-02-28 20:21:15.453 -08 000000069 INF: Y Motor: Unshifted Position: 3046472
17-02-28 20:21:15.503 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:15.509 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:21:15.509 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:21:15.509 -08 000000089 INF: ===================Camera #0 Frame #167===================
17-02-28 20:21:15.563 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:21:15.563 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:21:15.563 -08 000000033 INF: ===================Camera #2 Frame #169===================
17-02-28 20:21:15.627 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:15.682 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:21:15.682 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:21:15.682 -08 000000089 INF: ===================Camera #0 Frame #173===================
17-02-28 20:21:15.737 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:21:15.737 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:21:15.737 -08 000000033 INF: ===================Camera #2 Frame #175===================
17-02-28 20:21:15.767 -08 000000069 INF: Y Motor: Unshifted Position: 2844332
17-02-28 20:21:15.817 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:15.852 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:21:15.852 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:21:15.852 -08 000000089 INF: ===================Camera #0 Frame #179===================
17-02-28 20:21:15.907 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:21:15.907 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:21:15.907 -08 000000033 INF: ===================Camera #2 Frame #181===================
17-02-28 20:21:15.941 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.022 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:21:16.022 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:21:16.022 -08 000000089 INF: ===================Camera #0 Frame #186===================
17-02-28 20:21:16.077 -08 000000069 INF: Y Motor: Unshifted Position: 2640662
17-02-28 20:21:16.078 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:21:16.078 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:21:16.078 -08 000000033 INF: ===================Camera #2 Frame #188===================
17-02-28 20:21:16.127 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.195 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:21:16.195 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:21:16.195 -08 000000089 INF: ===================Camera #0 Frame #192===================
17-02-28 20:21:16.251 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.252 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:21:16.252 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:21:16.252 -08 000000033 INF: ===================Camera #2 Frame #194===================
17-02-28 20:21:16.366 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:21:16.366 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:21:16.366 -08 000000089 INF: ===================Camera #0 Frame #198===================
17-02-28 20:21:16.391 -08 000000069 INF: Y Motor: Unshifted Position: 2437005
17-02-28 20:21:16.424 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:21:16.424 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:21:16.424 -08 000000033 INF: ===================Camera #2 Frame #200===================
17-02-28 20:21:16.441 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.536 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:21:16.536 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:21:16.536 -08 000000089 INF: ===================Camera #0 Frame #205===================
17-02-28 20:21:16.565 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.595 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:21:16.595 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:21:16.595 -08 000000033 INF: ===================Camera #2 Frame #207===================
17-02-28 20:21:16.704 -08 000000069 INF: Y Motor: Unshifted Position: 2235498
17-02-28 20:21:16.709 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:21:16.709 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:21:16.709 -08 000000089 INF: ===================Camera #0 Frame #211===================
17-02-28 20:21:16.754 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.769 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:21:16.769 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:21:16.769 -08 000000033 INF: ===================Camera #2 Frame #213===================
17-02-28 20:21:16.878 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.879 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:21:16.879 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:21:16.879 -08 000000089 INF: ===================Camera #0 Frame #217===================
17-02-28 20:21:16.939 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:21:16.939 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:21:16.939 -08 000000033 INF: ===================Camera #2 Frame #219===================
17-02-28 20:21:17.014 -08 000000069 INF: Y Motor: Unshifted Position: 2032053
17-02-28 20:21:17.048 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:21:17.048 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:21:17.048 -08 000000089 INF: ===================Camera #0 Frame #223===================
17-02-28 20:21:17.064 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:17.110 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:21:17.110 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:21:17.110 -08 000000033 INF: ===================Camera #2 Frame #226===================
17-02-28 20:21:17.188 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:17.218 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:21:17.218 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:21:17.218 -08 000000089 INF: ===================Camera #0 Frame #230===================
17-02-28 20:21:17.284 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:21:17.284 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:21:17.284 -08 000000033 INF: ===================Camera #2 Frame #232===================
17-02-28 20:21:17.327 -08 000000069 INF: Y Motor: Unshifted Position: 1828380
17-02-28 20:21:17.377 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:17.391 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:21:17.391 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:21:17.391 -08 000000089 INF: ===================Camera #0 Frame #236===================
17-02-28 20:21:17.455 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:21:17.455 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:21:17.455 -08 000000033 INF: ===================Camera #2 Frame #238===================
17-02-28 20:21:17.501 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:17.561 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:21:17.561 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:21:17.561 -08 000000089 INF: ===================Camera #0 Frame #242===================
17-02-28 20:21:17.626 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:21:17.626 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:21:17.626 -08 000000033 INF: ===================Camera #2 Frame #245===================
17-02-28 20:21:17.640 -08 000000069 INF: Y Motor: Unshifted Position: 1626881
17-02-28 20:21:17.690 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:17.731 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:21:17.731 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:21:17.731 -08 000000089 INF: ===================Camera #0 Frame #249===================
17-02-28 20:21:17.799 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:21:17.799 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:21:17.799 -08 000000033 INF: ===================Camera #2 Frame #251===================
17-02-28 20:21:17.812 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:17.904 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:21:17.904 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:21:17.904 -08 000000089 INF: ===================Camera #0 Frame #255===================
17-02-28 20:21:17.951 -08 000000069 INF: Y Motor: Unshifted Position: 1422557
17-02-28 20:21:17.970 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:21:17.970 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:21:17.970 -08 000000033 INF: ===================Camera #2 Frame #257===================
17-02-28 20:21:18.001 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:18.072 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:21:18.072 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:21:18.072 -08 000000089 INF: ===================Camera #0 Frame #261===================
17-02-28 20:21:18.125 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:18.141 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:21:18.141 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:21:18.141 -08 000000033 INF: ===================Camera #2 Frame #264===================
17-02-28 20:21:18.242 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:21:18.242 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:21:18.242 -08 000000089 INF: ===================Camera #0 Frame #267===================
17-02-28 20:21:18.264 -08 000000069 INF: Y Motor: Unshifted Position: 1220833
17-02-28 20:21:18.314 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:18.315 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:21:18.315 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:21:18.315 -08 000000033 INF: ===================Camera #2 Frame #270===================
17-02-28 20:21:18.386 -08 000000073 INF: FPGA: Recv TDIYWAIT
17-02-28 20:21:18.387 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:18.388 -08 000000038 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:21:18.389 -08 000000058 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:21:18.389 -08 000000081 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:21:18.389 -08 000000058 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:21:18.389 -08 000000058 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:21:18.389 -08 000000058 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:21:18.389 -08 000000081 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:21:18.389 -08 000000081 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:21:18.389 -08 000000081 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:21:18.390 -08 000000058 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:21:18.392 -08 000000081 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:21:18.412 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:21:18.412 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:21:18.412 -08 000000089 INF: ===================Camera #0 Frame #272===================
17-02-28 20:21:18.428 -08 000000089 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:21:18.429 -08 000000089 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:18.438 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:18.574 -08 000000069 INF: Y Motor: Unshifted Position: 1017389
17-02-28 20:21:18.591 -08 000000089 INF: Camera #0 ReleaseBuffer
17-02-28 20:21:18.591 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:21:18.591 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:21:18.591 -08 000000033 INF: ===================Camera #2 Frame #272===================
17-02-28 20:21:18.591 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:21:18.597 -08 000000033 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:21:18.598 -08 000000033 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:18.624 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:18.624 -08 000000089 INF: ======================================
17-02-28 20:21:18.761 -08 000000086 INF: FPGA: Recv EX2MV
17-02-28 20:21:18.761 -08 000000086 INF: FPGA: Recv EX1MV
17-02-28 20:21:18.761 -08 000000058 INF: Excitation Filter 2: Moved 107 steps in 371.5793 ms
17-02-28 20:21:18.761 -08 000000081 INF: Excitation Filter 1: Moved 107 steps in 371.4915 ms
17-02-28 20:21:18.761 -08 000000058 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.688 ms
17-02-28 20:21:18.761 -08 000000081 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.6283 ms
17-02-28 20:21:18.761 -08 000000081 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.7314 ms
17-02-28 20:21:18.761 -08 000000058 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.8074 ms
17-02-28 20:21:18.761 -08 000000081 INF: ======================================
17-02-28 20:21:18.762 -08 000000058 INF: ======================================
17-02-28 20:21:18.763 -08 000000069 INF: Y Motor: Unshifted Position: 984869
17-02-28 20:21:18.763 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:18.763 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:18.763 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:18.764 -08 000000038 INF: ======================================
17-02-28 20:21:18.795 -08 000000033 INF: Camera #2 ReleaseBuffer
17-02-28 20:21:18.795 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:21:18.825 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:21:18.825 -08 000000069 INF: Y Motor: Moved to 14.8487 after 7865 ms
17-02-28 20:21:18.825 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:18.829 -08 000000033 INF: ======================================
17-02-28 20:21:18.831 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:21:18.832 -08 000000025 INF: ======================================
17-02-28 20:21:18.887 -08 000000069 INF: Y Motor: Recv v 4097\r
17-02-28 20:21:18.887 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:18.887 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:18.949 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:21:18.949 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:18.949 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:19.012 -08 000000069 INF: Y Motor: Recv v 134217728\r
17-02-28 20:21:19.012 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:21:19.012 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:19.012 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:19.073 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:21:19.073 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:19.073 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:19.073 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:19.135 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:21:19.135 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:19.135 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:19.197 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:21:19.197 -08 000000069 INF: ======================================
17-02-28 20:21:19.198 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:19.199 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:19.200 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.200 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:21:19.261 -08 000000109 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:21:19.261 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:19.320 -08 000000035 INF: FPGA: Recv TDIYERD 1484869
17-02-28 20:21:19.320 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:21:19.385 -08 000000108 INF: FPGA: Recv ZADCR 21297
17-02-28 20:21:19.385 -08 000000018 INF: At scan end Y pos = 14.849 and Z pos = -0.082. Y moved -48.539 mm
17-02-28 20:21:19.385 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:21:19.447 -08 000000060 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:21:19.447 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:21:19.447 -08 000000018 INF: TDIScan finished after 11897.4141 ms
17-02-28 20:21:19.447 -08 000000018 INF: Image[0]: Y should trigger at 63.388 mm, 2nd row was at 64.297 mm (error = 0.909 mm)
17-02-28 20:21:19.447 -08 000000018 INF: Image[2]: Y should trigger at 63.388 mm, 2nd row was at 64.297 mm (error = 0.909 mm)
17-02-28 20:21:19.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.478 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.833 um
17-02-28 20:21:19.479 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.479 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:21:19.509 -08 000000050 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:21:19.510 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.510 -08 000000036 INF: ===================Dither Clean Up Command===================
17-02-28 20:21:19.510 -08 000000072 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:21:19.511 -08 000000073 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:21:19.511 -08 000000053 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:21:19.511 -08 000000072 INF: ======================================
17-02-28 20:21:19.511 -08 000000053 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:21:19.511 -08 000000053 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:21:19.511 -08 000000073 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:21:19.511 -08 000000073 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:21:19.511 -08 000000051 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:21:19.511 -08 000000069 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:19.512 -08 000000051 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:21:19.515 -08 000000069 INF: ===================LFT:Extracting coords===================
17-02-28 20:21:19.540 -08 000000069 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:19.541 -08 000000069 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:21:19.542 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.542 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.542 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.542 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.542 -08 000000090 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:19.542 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:19.542 -08 000000060 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:19.542 -08 000000075 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:19.571 -08 000000105 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:19.571 -08 000000105 INF: FPGA: Recv ZSEL 
17-02-28 20:21:19.571 -08 000000051 INF: FPGA: Xmit ZDACW 20345\n
17-02-28 20:21:19.571 -08 000000053 INF: ======================================
17-02-28 20:21:19.573 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:21:19.573 -08 000000073 INF: ======================================
17-02-28 20:21:19.616 -08 000000052 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:19.616 -08 000000060 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:19.617 -08 000000075 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:19.617 -08 000000090 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:19.635 -08 000000101 INF: FPGA: Recv ZDACW 
17-02-28 20:21:19.636 -08 000000051 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:21:19.636 -08 000000051 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:21:19.696 -08 000000053 INF: FPGA: Recv TDIBB
17-02-28 20:21:19.696 -08 000000051 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:21:19.697 -08 000000051 INF: ======================================
17-02-28 20:21:19.768 -08 000000075 INF: LFT found best fwhm score 2.000133 in 151 ms
17-02-28 20:21:19.768 -08 000000060 INF: LFT found best fwhm score 2.000481 in 152 ms
17-02-28 20:21:19.768 -08 000000060 INF: LFT found good score at index 7085 with fwhm value 2.000481. Next cycle, cycle 4 starting Z position for bottom surface is at -0.058 mm FC:A, C:3,L:8,B
17-02-28 20:21:19.768 -08 000000052 INF: LFT found best fwhm score 2.00012 in 152 ms
17-02-28 20:21:19.768 -08 000000052 INF: LFT found good score at index 1525 with fwhm value 2.00012. Next cycle, cycle 4 starting Z position for bottom surface is at -0.058 mm FC:A, C:3,L:8,B
17-02-28 20:21:19.768 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.768 -08 000000090 INF: LFT found best fwhm score 2.000863 in 151 ms
17-02-28 20:21:19.768 -08 000000090 INF: LFT found good score at index 1461 with fwhm value 2.000863. Next cycle, cycle 4 starting Z position for bottom surface is at -0.058 mm FC:A, C:3,L:8,B
17-02-28 20:21:19.768 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.768 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.768 -08 000000060 INF: ======================================
17-02-28 20:21:19.768 -08 000000052 INF: ======================================
17-02-28 20:21:19.769 -08 000000090 INF: ======================================
17-02-28 20:21:19.769 -08 000000075 INF: LFT found good score at index 1489 with fwhm value 2.000133. Next cycle, cycle 4 starting Z position for bottom surface is at -0.058 mm FC:A, C:3,L:8,B
17-02-28 20:21:19.769 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.769 -08 000000075 INF: ======================================
17-02-28 20:21:19.771 -08 000000069 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:19.772 -08 000000069 INF: LFT weighted average best Z for bottom surface is at -0.058mm FC:A, C:3,L:8,B
17-02-28 20:21:19.772 -08 000000069 INF: ======================================
17-02-28 20:21:19.773 -08 000000036 INF: ======================================
17-02-28 20:21:19.774 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:21:19.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:21:19.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:21:19.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:21:19.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494===================
17-02-28 20:21:19.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494===================
17-02-28 20:21:19.777 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:21:19.777 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494===================
17-02-28 20:21:19.777 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module..., Waiting for image analysis===================
17-02-28 20:21:19.777 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:21:19.800 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:21:19.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:19.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494===================
17-02-28 20:21:19.801 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:19.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494===================
17-02-28 20:21:19.801 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:21:19.801 -08 000000018 INF: Transformed XStagePosition from 26.03033 mm to 26.0686294734478 mm.
17-02-28 20:21:19.813 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4973607397415 mm.
17-02-28 20:21:19.813 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2973607397415 mm.
17-02-28 20:21:19.813 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3881107397415 mm.
17-02-28 20:21:19.816 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.816 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:21:19.816 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.816 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -77.6 um, section = H_1
17-02-28 20:21:19.843 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":8,"Tile":2103,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF204","HCSMMF285","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.877 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:19.878 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:19.879 -08 000000081 INF: ===================MoveEmissionFilters===================
17-02-28 20:21:19.881 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:21:19.881 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:19.881 -08 000000105 INF: ===================Move X,Y, Parallel===================
17-02-28 20:21:19.882 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:19.883 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:19.883 -08 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:19.883 -08 000000053 INF: ===================Move X Motor without settling===================
17-02-28 20:21:19.884 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:21:19.884 -08 000000053 INF: X Motor: Xmit PR VM\n
17-02-28 20:21:19.884 -08 000000085 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:21:19.884 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:19.884 -08 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:19.885 -08 000000101 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:21:19.885 -08 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:19.885 -08 000000101 INF: ======================================
17-02-28 20:21:19.885 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:21:19.886 -08 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:19.887 -08 000000101 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:19.887 -08 000000101 INF: Y Motor: Moving to 64.4974 mm @25.000 mm/sec, started at 14.8487 mm
17-02-28 20:21:19.888 -08 000000101 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:19.888 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:19.889 -08 000000033 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:21:19.889 -08 000000033 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:21:19.890 -08 000000033 INF: ======================================
17-02-28 20:21:19.890 -08 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:19.891 -08 000000087 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:21:19.892 -08 000000087 INF: ======================================
17-02-28 20:21:19.892 -08 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:19.895 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:19.896 -08 000000036 INF: ======================================
17-02-28 20:21:19.903 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:21:19.904 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:21:19.904 -08 000000069 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:21:19.904 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:19.904 -08 000000033 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:21:19.904 -08 000000036 INF: ======================================
17-02-28 20:21:19.905 -08 000000033 INF: ======================================
17-02-28 20:21:19.905 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:21:19.905 -08 000000069 INF: ======================================
17-02-28 20:21:19.905 -08 000000050 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:21:19.906 -08 000000052 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:21:19.906 -08 000000089 INF: ===================Camera Arm TDI===================
17-02-28 20:21:19.906 -08 000000050 INF: ======================================
17-02-28 20:21:19.906 -08 000000052 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:19.906 -08 000000087 INF: ======================================
17-02-28 20:21:19.907 -08 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:19.907 -08 000000052 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:21:19.907 -08 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:19.908 -08 000000038 INF: ======================================
17-02-28 20:21:19.908 -08 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:19.909 -08 000000089 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:19.909 -08 000000025 INF: ======================================
17-02-28 20:21:19.909 -08 000000078 INF: ======================================
17-02-28 20:21:19.910 -08 000000081 INF: ======================================
17-02-28 20:21:19.911 -08 000000089 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:19.960 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":8,"Tile":2104,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF210","HCSMMF273","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.961 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":8,"Tile":2110,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF184","HCSMMF255","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.962 -08 000000051 INF: FPGA: Recv ZSEL 
17-02-28 20:21:19.963 -08 000000052 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:19.964 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:19.964 -08 000000101 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:19.964 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:19.964 -08 000000052 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:21:19.964 -08 000000053 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:21:19.964 -08 000000053 INF: X Motor: Xmit PR VI\n
17-02-28 20:21:19.972 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":8,"Tile":2102,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF200","HCSMMF197","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.976 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":8,"Tile":2105,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF201","HCSMMF269","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.984 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":8,"Tile":2107,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF251","HCSMMF209","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.991 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":8,"Tile":2101,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF275","HCSMMF217","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.993 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":8,"Tile":2109,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF177","HCSMMF266","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.994 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":8,"Tile":2108,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF253","HCSMMF250","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.997 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":8,"Tile":2106,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF268","HCSMMF182","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.998 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":8,"Tile":2112,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF227","HCSMMF203","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.999 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":8,"Tile":2114,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF257","HCSMMF198","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.000 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":8,"Tile":2113,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF278","HCSMMF241","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.001 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":8,"Tile":2116,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF230","HCSMMF212","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.001 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":8,"Tile":2115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF260","HCSMMF283","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.002 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":8,"Tile":2117,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF287","HCSMMF194","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.003 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":8,"Tile":2120,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF267","HCSMMF261","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.004 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":8,"Tile":2119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF265","HCSMMF282","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.005 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":8,"Tile":2118,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF186","HCSMMF205","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.005 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":8,"Tile":2111,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF263","HCSMMF280","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.006 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":8,"Tile":2123,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF274","HCSMMF193","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.007 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":8,"Tile":2124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF258","HCSMMF222","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.008 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":8,"Tile":2128,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF245","HCSMMF229","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.010 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":8,"Tile":2127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF231","HCSMMF188","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.010 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":8,"Tile":2126,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF196","HCSMMF232","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.011 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":8,"Tile":2125,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF180","HCSMMF220","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.024 -08 000000075 INF: FPGA: Recv TDIBB
17-02-28 20:21:20.024 -08 000000052 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:20.026 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:20.026 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:20.026 -08 000000053 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:21:20.026 -08 000000053 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:21:20.026 -08 000000053 INF: X Motor: Moving to 26.0686 mm @15.000 mm/sec, started at 24.9692 mm
17-02-28 20:21:20.026 -08 000000052 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:21:20.026 -08 000000053 INF: X Motor: Xmit MA -13489\n
17-02-28 20:21:20.026 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:20.027 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":8,"Tile":2121,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF211","HCSMMF244","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.028 -08 000000052 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:21:20.028 -08 000000052 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:21:20.028 -08 000000052 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:21:20.029 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":8,"Tile":2122,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF236","HCSMMF225","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.031 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:20.037 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:21:20.086 -08 000000108 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:20.086 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:20.088 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:20.088 -08 000000101 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:20.088 -08 000000053 INF: X Motor: Recv MA -13489\r\n>
17-02-28 20:21:20.088 -08 000000101 INF: Y Motor: Set target position to 5949736 encoder counts
17-02-28 20:21:20.088 -08 000000101 INF: Y Motor: Xmit s r0xca 5949736\r
17-02-28 20:21:20.088 -08 000000052 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:21:20.088 -08 000000053 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:21:20.089 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:20.090 -08 000000052 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:21:20.090 -08 000000052 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:21:20.090 -08 000000052 INF: Z Motor: Arming to move to -0.0376 mm
17-02-28 20:21:20.090 -08 000000052 INF: FPGA: Xmit ZYT 6429736 4\n
17-02-28 20:21:20.148 -08 000000064 INF: FPGA: Recv ZYT 
17-02-28 20:21:20.148 -08 000000052 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1484869 enc / 14.849 mm / ) = 6429736 enc / 64.297 mm
17-02-28 20:21:20.148 -08 000000052 INF: FPGA: Xmit ZARM 9859\n
17-02-28 20:21:20.150 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:20.150 -08 000000101 INF: Y Motor: Start the move command
17-02-28 20:21:20.150 -08 000000101 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:20.202 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:20.202 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:21:20.210 -08 000000010 INF: FPGA: Recv ZARM
17-02-28 20:21:20.210 -08 000000052 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0644 ms
17-02-28 20:21:20.210 -08 000000052 INF: Z Motor: ArmAbsStepped took 119.7789 ms
17-02-28 20:21:20.210 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:20.212 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:20.212 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:21:20.212 -08 000000101 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:21:20.212 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:20.213 -08 000000052 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:21:20.214 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:21:20.215 -08 000000052 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:21:20.216 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:21:20.217 -08 000000052 INF: ======================================
17-02-28 20:21:20.239 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:20.245 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:21:20.336 -08 000000101 INF: Y Motor: Unshifted Position: 1066069
17-02-28 20:21:20.340 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:20.345 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:21:20.386 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:20.439 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:20.445 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:21:20.513 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:20.515 -08 000000089 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:21:20.515 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:21:20.515 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:20.531 -08 000000089 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:20.533 -08 000000089 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:20.568 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:20.651 -08 000000101 INF: Y Motor: Unshifted Position: 1775702
17-02-28 20:21:20.701 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:20.712 -08 000000053 INF: X Motor: Xmit PR ER\n
17-02-28 20:21:20.775 -08 000000053 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:21:20.775 -08 000000053 INF: X Motor: Moved to 26.0679 after 686 ms
17-02-28 20:21:20.775 -08 000000053 INF: ======================================
17-02-28 20:21:20.824 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:20.868 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:21:20.961 -08 000000101 INF: Y Motor: Unshifted Position: 2551550
17-02-28 20:21:21.011 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:21.135 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:21.143 -08 000000089 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:21:21.143 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:21:21.143 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:21.159 -08 000000089 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:21.161 -08 000000089 INF: ===================Camera Arm TDI===================
17-02-28 20:21:21.163 -08 000000089 INF: ======================================
17-02-28 20:21:21.164 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:21.165 -08 000000085 INF: ======================================
17-02-28 20:21:21.274 -08 000000101 INF: Y Motor: Unshifted Position: 3336498
17-02-28 20:21:21.324 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:21.448 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:21.586 -08 000000101 INF: Y Motor: Unshifted Position: 4112407
17-02-28 20:21:21.636 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:21.760 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:21.898 -08 000000101 INF: Y Motor: Unshifted Position: 4897337
17-02-28 20:21:21.948 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:22.072 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:22.208 -08 000000101 INF: Y Motor: Unshifted Position: 5671972
17-02-28 20:21:22.258 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:22.385 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:22.522 -08 000000101 INF: Y Motor: Unshifted Position: 5949738
17-02-28 20:21:22.522 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:22.522 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:22.586 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:22.586 -08 000000101 INF: Y Motor: Moved to 64.4974 after 2374 ms
17-02-28 20:21:22.586 -08 000000101 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:22.646 -08 000000101 INF: Y Motor: Recv v 4096\r
17-02-28 20:21:22.646 -08 000000101 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:22.646 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:22.710 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:22.710 -08 000000101 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:22.710 -08 000000101 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:22.770 -08 000000101 INF: Y Motor: Recv v 402653184\r
17-02-28 20:21:22.770 -08 000000101 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:21:22.770 -08 000000101 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:22.770 -08 000000101 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:22.832 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:22.832 -08 000000101 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:22.832 -08 000000101 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:22.832 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:22.894 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:22.894 -08 000000101 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:22.894 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:22.959 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:22.959 -08 000000101 INF: ======================================
17-02-28 20:21:22.960 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:21:22.961 -08 000000105 INF: ======================================
17-02-28 20:21:22.963 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:22.964 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:22.964 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:21:22.964 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:21:23.021 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:21:23.021 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:21:23.081 -08 000000078 INF: FPGA: Recv ZFREQCL
17-02-28 20:21:23.081 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:21:23.082 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:23.082 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:23.143 -08 000000039 INF: FPGA: Recv TDIYERD 6449738
17-02-28 20:21:23.143 -08 000000018 INF: Before scan, Y encoder from FPGA = 6449738 counts (64.497 mm)
17-02-28 20:21:23.144 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:23.144 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:23.145 -08 000000077 INF: ===================TDI FPGA Arm===================
17-02-28 20:21:23.145 -08 000000089 INF: ===================Set YMotor gains for scans===================
17-02-28 20:21:23.145 -08 000000089 INF: ======================================
17-02-28 20:21:23.146 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:23.146 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:21:23.147 -08 000000077 INF: FPGA: Xmit TDIYPOS 6338811\n
17-02-28 20:21:23.205 -08 000000109 INF: FPGA: Recv TDIYPOS
17-02-28 20:21:23.205 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:23.207 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:21:23.207 -08 000000077 INF: FPGA: Xmit TDIYARM3 139264 6429736 1 1\n
17-02-28 20:21:23.267 -08 000000087 INF: FPGA: Recv TDIYARM3
17-02-28 20:21:23.267 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:23.268 -08 000000077 INF: ===================TDI FPGA Arm===================
17-02-28 20:21:23.269 -08 000000077 INF: ======================================
17-02-28 20:21:23.270 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:23.271 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:23.271 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:23.272 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:23.272 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:23.273 -08 000000033 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:21:23.273 -08 000000085 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:21:23.274 -08 000000033 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:21:23.274 -08 000000033 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:21:23.274 -08 000000033 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:21:23.274 -08 000000085 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:21:23.274 -08 000000085 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:21:23.274 -08 000000085 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:21:23.274 -08 000000033 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:21:23.275 -08 000000085 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:21:23.641 -08 000000082 INF: FPGA: Recv EX1MV
17-02-28 20:21:23.641 -08 000000082 INF: FPGA: Recv EX2MV
17-02-28 20:21:23.641 -08 000000085 INF: Excitation Filter 2: Moved -107 steps in 367.2424 ms
17-02-28 20:21:23.641 -08 000000033 INF: Excitation Filter 1: Moved -107 steps in 367.5317 ms
17-02-28 20:21:23.641 -08 000000033 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.6636 ms
17-02-28 20:21:23.641 -08 000000033 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.7366 ms
17-02-28 20:21:23.641 -08 000000085 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.3808 ms
17-02-28 20:21:23.641 -08 000000085 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.8898 ms
17-02-28 20:21:23.642 -08 000000033 INF: ======================================
17-02-28 20:21:23.642 -08 000000085 INF: ======================================
17-02-28 20:21:23.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:23.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:23.645 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:21:23.645 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:23.645 -08 000000064 INF: ===================FPGA Z Wait===================
17-02-28 20:21:23.645 -08 000000047 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:23.646 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:21:23.646 -08 000000030 INF: ===================Camera TDI, Parallel===================
17-02-28 20:21:23.646 -08 000000047 INF: Y Motor: Moving to 14.8490 mm @6.500 mm/sec, started at 64.4974 mm
17-02-28 20:21:23.646 -08 000000108 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:21:23.646 -08 000000047 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:23.646 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:23.647 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:21:23.647 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:21:23.649 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:23.649 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:23.649 -08 000000108 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:21:23.649 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:23.649 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:23.708 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:23.708 -08 000000047 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:23.708 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:23.770 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:23.770 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:23.799 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:23.799 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:23.801 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:23.801 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:23.832 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:21:23.832 -08 000000047 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:23.832 -08 000000047 INF: Y Motor: Set target position to 984902 encoder counts
17-02-28 20:21:23.832 -08 000000047 INF: Y Motor: Xmit s r0xca 984902\r
17-02-28 20:21:23.894 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:23.894 -08 000000047 INF: Y Motor: Start the move command
17-02-28 20:21:23.894 -08 000000047 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:23.949 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:23.949 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:23.951 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:23.951 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:23.956 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:23.956 -08 000000047 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:21:23.956 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.017 -08 000000066 INF: FPGA: Recv ZWAIT 
17-02-28 20:21:24.017 -08 000000064 INF: ======================================
17-02-28 20:21:24.081 -08 000000047 INF: Y Motor: Unshifted Position: 5887232
17-02-28 20:21:24.099 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:24.099 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:24.099 -08 000000039 INF: ===================Camera #0 Frame #5===================
17-02-28 20:21:24.101 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:24.101 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:24.101 -08 000000051 INF: ===================Camera #2 Frame #5===================
17-02-28 20:21:24.131 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.255 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.268 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:21:24.268 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:21:24.268 -08 000000051 INF: ===================Camera #2 Frame #11===================
17-02-28 20:21:24.272 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:21:24.272 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:21:24.272 -08 000000039 INF: ===================Camera #0 Frame #11===================
17-02-28 20:21:24.394 -08 000000047 INF: Y Motor: Unshifted Position: 5683564
17-02-28 20:21:24.438 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:21:24.438 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:21:24.438 -08 000000051 INF: ===================Camera #2 Frame #17===================
17-02-28 20:21:24.444 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.449 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:21:24.449 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:21:24.449 -08 000000039 INF: ===================Camera #0 Frame #17===================
17-02-28 20:21:24.568 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.611 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:21:24.611 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:21:24.611 -08 000000051 INF: ===================Camera #2 Frame #23===================
17-02-28 20:21:24.626 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:21:24.626 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:21:24.626 -08 000000039 INF: ===================Camera #0 Frame #24===================
17-02-28 20:21:24.704 -08 000000047 INF: Y Motor: Unshifted Position: 5482075
17-02-28 20:21:24.754 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.789 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:21:24.789 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:21:24.789 -08 000000051 INF: ===================Camera #2 Frame #30===================
17-02-28 20:21:24.797 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:21:24.797 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:21:24.797 -08 000000039 INF: ===================Camera #0 Frame #30===================
17-02-28 20:21:24.881 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.967 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:21:24.967 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:21:24.967 -08 000000039 INF: ===================Camera #0 Frame #36===================
17-02-28 20:21:24.970 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:21:24.970 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:21:24.970 -08 000000051 INF: ===================Camera #2 Frame #37===================
17-02-28 20:21:25.017 -08 000000047 INF: Y Motor: Unshifted Position: 5278399
17-02-28 20:21:25.067 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:25.137 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:21:25.137 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:21:25.137 -08 000000039 INF: ===================Camera #0 Frame #43===================
17-02-28 20:21:25.153 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:21:25.153 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:21:25.153 -08 000000051 INF: ===================Camera #2 Frame #43===================
17-02-28 20:21:25.191 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:25.319 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:21:25.319 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:21:25.319 -08 000000039 INF: ===================Camera #0 Frame #49===================
17-02-28 20:21:25.330 -08 000000047 INF: Y Motor: Unshifted Position: 5074947
17-02-28 20:21:25.331 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:21:25.331 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:21:25.331 -08 000000051 INF: ===================Camera #2 Frame #50===================
17-02-28 20:21:25.380 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:25.491 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:21:25.491 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:21:25.491 -08 000000039 INF: ===================Camera #0 Frame #56===================
17-02-28 20:21:25.503 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:21:25.503 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:21:25.503 -08 000000051 INF: ===================Camera #2 Frame #56===================
17-02-28 20:21:25.504 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:25.640 -08 000000047 INF: Y Motor: Unshifted Position: 4873235
17-02-28 20:21:25.663 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:21:25.663 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:21:25.663 -08 000000039 INF: ===================Camera #0 Frame #62===================
17-02-28 20:21:25.673 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:21:25.673 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:21:25.674 -08 000000051 INF: ===================Camera #2 Frame #62===================
17-02-28 20:21:25.690 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:25.817 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:25.832 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:21:25.832 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:21:25.832 -08 000000039 INF: ===================Camera #0 Frame #68===================
17-02-28 20:21:25.853 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:21:25.853 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:21:25.853 -08 000000051 INF: ===================Camera #2 Frame #69===================
17-02-28 20:21:25.954 -08 000000047 INF: Y Motor: Unshifted Position: 4669137
17-02-28 20:21:26.000 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:21:26.000 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:21:26.000 -08 000000039 INF: ===================Camera #0 Frame #75===================
17-02-28 20:21:26.004 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:26.037 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:21:26.037 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:21:26.037 -08 000000051 INF: ===================Camera #2 Frame #76===================
17-02-28 20:21:26.128 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:26.171 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:21:26.171 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:21:26.171 -08 000000039 INF: ===================Camera #0 Frame #81===================
17-02-28 20:21:26.219 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:21:26.219 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:21:26.219 -08 000000051 INF: ===================Camera #2 Frame #83===================
17-02-28 20:21:26.265 -08 000000047 INF: Y Motor: Unshifted Position: 4467406
17-02-28 20:21:26.316 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:26.341 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:21:26.341 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:21:26.341 -08 000000039 INF: ===================Camera #0 Frame #87===================
17-02-28 20:21:26.394 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:21:26.394 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:21:26.394 -08 000000051 INF: ===================Camera #2 Frame #89===================
17-02-28 20:21:26.442 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:26.510 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:21:26.510 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:21:26.510 -08 000000039 INF: ===================Camera #0 Frame #93===================
17-02-28 20:21:26.563 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:21:26.563 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:21:26.563 -08 000000051 INF: ===================Camera #2 Frame #95===================
17-02-28 20:21:26.578 -08 000000047 INF: Y Motor: Unshifted Position: 4263962
17-02-28 20:21:26.628 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:26.656 -08 000000075 INF: RunCopyService queue size at 2/28/2017 8:21:26 PM is 25
17-02-28 20:21:26.679 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:21:26.679 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:21:26.687 -08 000000039 INF: ===================Camera #0 Frame #99===================
17-02-28 20:21:26.732 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:21:26.732 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:21:26.732 -08 000000051 INF: ===================Camera #2 Frame #101===================
17-02-28 20:21:26.754 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:26.857 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:21:26.857 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:21:26.857 -08 000000039 INF: ===================Camera #0 Frame #106===================
17-02-28 20:21:26.891 -08 000000047 INF: Y Motor: Unshifted Position: 4060932
17-02-28 20:21:26.901 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:21:26.901 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:21:26.901 -08 000000051 INF: ===================Camera #2 Frame #108===================
17-02-28 20:21:26.941 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.028 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:21:27.028 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:21:27.028 -08 000000039 INF: ===================Camera #0 Frame #112===================
17-02-28 20:21:27.065 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.073 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:21:27.073 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:21:27.073 -08 000000051 INF: ===================Camera #2 Frame #114===================
17-02-28 20:21:27.197 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:21:27.197 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:21:27.197 -08 000000039 INF: ===================Camera #0 Frame #119===================
17-02-28 20:21:27.201 -08 000000047 INF: Y Motor: Unshifted Position: 3858789
17-02-28 20:21:27.242 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:21:27.242 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:21:27.242 -08 000000051 INF: ===================Camera #2 Frame #120===================
17-02-28 20:21:27.251 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.369 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:21:27.369 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:21:27.369 -08 000000039 INF: ===================Camera #0 Frame #125===================
17-02-28 20:21:27.378 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.411 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:21:27.411 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:21:27.411 -08 000000051 INF: ===================Camera #2 Frame #126===================
17-02-28 20:21:27.514 -08 000000047 INF: Y Motor: Unshifted Position: 3655120
17-02-28 20:21:27.538 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:21:27.538 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:21:27.538 -08 000000039 INF: ===================Camera #0 Frame #131===================
17-02-28 20:21:27.564 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.580 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:21:27.580 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:21:27.580 -08 000000051 INF: ===================Camera #2 Frame #133===================
17-02-28 20:21:27.688 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.709 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:21:27.709 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:21:27.709 -08 000000039 INF: ===================Camera #0 Frame #137===================
17-02-28 20:21:27.753 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:21:27.753 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:21:27.753 -08 000000051 INF: ===================Camera #2 Frame #139===================
17-02-28 20:21:27.828 -08 000000047 INF: Y Motor: Unshifted Position: 3453401
17-02-28 20:21:27.878 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.878 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:21:27.878 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:21:27.878 -08 000000039 INF: ===================Camera #0 Frame #144===================
17-02-28 20:21:27.923 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:21:27.923 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:21:27.923 -08 000000051 INF: ===================Camera #2 Frame #145===================
17-02-28 20:21:28.001 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.051 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:21:28.051 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:21:28.051 -08 000000039 INF: ===================Camera #0 Frame #150===================
17-02-28 20:21:28.094 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:21:28.094 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:21:28.094 -08 000000051 INF: ===================Camera #2 Frame #152===================
17-02-28 20:21:28.137 -08 000000047 INF: Y Motor: Unshifted Position: 3248653
17-02-28 20:21:28.187 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.219 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:21:28.219 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:21:28.219 -08 000000039 INF: ===================Camera #0 Frame #156===================
17-02-28 20:21:28.266 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:21:28.266 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:21:28.266 -08 000000051 INF: ===================Camera #2 Frame #158===================
17-02-28 20:21:28.314 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.387 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:21:28.387 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:21:28.387 -08 000000039 INF: ===================Camera #0 Frame #162===================
17-02-28 20:21:28.435 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:21:28.435 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:21:28.435 -08 000000051 INF: ===================Camera #2 Frame #164===================
17-02-28 20:21:28.450 -08 000000047 INF: Y Motor: Unshifted Position: 3046506
17-02-28 20:21:28.500 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.555 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:21:28.555 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:21:28.555 -08 000000039 INF: ===================Camera #0 Frame #169===================
17-02-28 20:21:28.604 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:21:28.604 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:21:28.604 -08 000000051 INF: ===================Camera #2 Frame #170===================
17-02-28 20:21:28.624 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.726 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:21:28.726 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:21:28.726 -08 000000039 INF: ===================Camera #0 Frame #175===================
17-02-28 20:21:28.763 -08 000000047 INF: Y Motor: Unshifted Position: 2844797
17-02-28 20:21:28.773 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:21:28.773 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:21:28.773 -08 000000051 INF: ===================Camera #2 Frame #177===================
17-02-28 20:21:28.813 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.894 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:21:28.894 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:21:28.894 -08 000000039 INF: ===================Camera #0 Frame #181===================
17-02-28 20:21:28.938 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.945 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:21:28.945 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:21:28.945 -08 000000051 INF: ===================Camera #2 Frame #183===================
17-02-28 20:21:29.062 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:21:29.062 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:21:29.062 -08 000000039 INF: ===================Camera #0 Frame #187===================
17-02-28 20:21:29.074 -08 000000047 INF: Y Motor: Unshifted Position: 2640694
17-02-28 20:21:29.114 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:21:29.114 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:21:29.114 -08 000000051 INF: ===================Camera #2 Frame #189===================
17-02-28 20:21:29.124 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:29.230 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:21:29.230 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:21:29.230 -08 000000039 INF: ===================Camera #0 Frame #193===================
17-02-28 20:21:29.248 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:29.282 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:21:29.282 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:21:29.282 -08 000000051 INF: ===================Camera #2 Frame #195===================
17-02-28 20:21:29.387 -08 000000047 INF: Y Motor: Unshifted Position: 2438990
17-02-28 20:21:29.398 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:21:29.398 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:21:29.398 -08 000000039 INF: ===================Camera #0 Frame #200===================
17-02-28 20:21:29.437 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:29.451 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:21:29.451 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:21:29.451 -08 000000051 INF: ===================Camera #2 Frame #202===================
17-02-28 20:21:29.561 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:29.569 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:21:29.569 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:21:29.569 -08 000000039 INF: ===================Camera #0 Frame #206===================
17-02-28 20:21:29.623 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:21:29.623 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:21:29.623 -08 000000051 INF: ===================Camera #2 Frame #208===================
17-02-28 20:21:29.698 -08 000000047 INF: Y Motor: Unshifted Position: 2235534
17-02-28 20:21:29.737 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:21:29.737 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:21:29.737 -08 000000039 INF: ===================Camera #0 Frame #212===================
17-02-28 20:21:29.748 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:29.792 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:21:29.792 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:21:29.792 -08 000000051 INF: ===================Camera #2 Frame #214===================
17-02-28 20:21:29.874 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:29.905 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:21:29.905 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:21:29.905 -08 000000039 INF: ===================Camera #0 Frame #218===================
17-02-28 20:21:29.961 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:21:29.961 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:21:29.961 -08 000000051 INF: ===================Camera #2 Frame #220===================
17-02-28 20:21:30.011 -08 000000047 INF: Y Motor: Unshifted Position: 2033167
17-02-28 20:21:30.061 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:30.073 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:21:30.073 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:21:30.074 -08 000000039 INF: ===================Camera #0 Frame #224===================
17-02-28 20:21:30.129 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:21:30.129 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:21:30.129 -08 000000051 INF: ===================Camera #2 Frame #227===================
17-02-28 20:21:30.185 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:30.242 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:21:30.242 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:21:30.242 -08 000000039 INF: ===================Camera #0 Frame #231===================
17-02-28 20:21:30.301 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:21:30.301 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:21:30.301 -08 000000051 INF: ===================Camera #2 Frame #233===================
17-02-28 20:21:30.321 -08 000000047 INF: Y Motor: Unshifted Position: 1829496
17-02-28 20:21:30.371 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:30.413 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:21:30.413 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:21:30.413 -08 000000039 INF: ===================Camera #0 Frame #237===================
17-02-28 20:21:30.470 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:21:30.470 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:21:30.470 -08 000000051 INF: ===================Camera #2 Frame #239===================
17-02-28 20:21:30.498 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:30.581 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:21:30.581 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:21:30.581 -08 000000039 INF: ===================Camera #0 Frame #243===================
17-02-28 20:21:30.634 -08 000000047 INF: Y Motor: Unshifted Position: 1626050
17-02-28 20:21:30.639 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:21:30.639 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:21:30.639 -08 000000051 INF: ===================Camera #2 Frame #245===================
17-02-28 20:21:30.684 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:30.749 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:21:30.749 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:21:30.749 -08 000000039 INF: ===================Camera #0 Frame #249===================
17-02-28 20:21:30.808 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:30.808 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:21:30.808 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:21:30.808 -08 000000051 INF: ===================Camera #2 Frame #252===================
17-02-28 20:21:30.917 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:21:30.917 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:21:30.917 -08 000000039 INF: ===================Camera #0 Frame #256===================
17-02-28 20:21:30.947 -08 000000047 INF: Y Motor: Unshifted Position: 1424327
17-02-28 20:21:30.982 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:21:30.982 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:21:30.982 -08 000000051 INF: ===================Camera #2 Frame #258===================
17-02-28 20:21:30.997 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:31.090 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:21:31.090 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:21:31.090 -08 000000039 INF: ===================Camera #0 Frame #262===================
17-02-28 20:21:31.121 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:31.153 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:21:31.153 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:21:31.153 -08 000000051 INF: ===================Camera #2 Frame #264===================
17-02-28 20:21:31.257 -08 000000047 INF: Y Motor: Unshifted Position: 1220870
17-02-28 20:21:31.260 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:21:31.260 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:21:31.260 -08 000000039 INF: ===================Camera #0 Frame #268===================
17-02-28 20:21:31.307 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:31.324 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:21:31.324 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:21:31.324 -08 000000051 INF: ===================Camera #2 Frame #271===================
17-02-28 20:21:31.379 -08 000000025 INF: FPGA: Recv TDIYWAIT
17-02-28 20:21:31.379 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:31.381 -08 000000108 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:21:31.382 -08 000000010 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:21:31.382 -08 000000077 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:21:31.382 -08 000000010 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:21:31.382 -08 000000010 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:21:31.382 -08 000000010 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:21:31.382 -08 000000077 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:21:31.382 -08 000000010 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:21:31.382 -08 000000077 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:21:31.382 -08 000000077 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:21:31.383 -08 000000077 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:21:31.430 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:21:31.430 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:21:31.430 -08 000000039 INF: ===================Camera #0 Frame #272===================
17-02-28 20:21:31.433 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:31.443 -08 000000039 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:21:31.444 -08 000000039 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:31.570 -08 000000047 INF: Y Motor: Unshifted Position: 1017424
17-02-28 20:21:31.576 -08 000000039 INF: Camera #0 ReleaseBuffer
17-02-28 20:21:31.576 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:21:31.576 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:21:31.576 -08 000000051 INF: ===================Camera #2 Frame #272===================
17-02-28 20:21:31.576 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:21:31.579 -08 000000051 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:21:31.580 -08 000000051 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:31.610 -08 000000039 INF: ======================================
17-02-28 20:21:31.620 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:31.748 -08 000000051 INF: Camera #2 ReleaseBuffer
17-02-28 20:21:31.748 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:21:31.754 -08 000000101 INF: FPGA: Recv EX1MV
17-02-28 20:21:31.754 -08 000000101 INF: FPGA: Recv EX2MV
17-02-28 20:21:31.754 -08 000000010 INF: Excitation Filter 1: Moved 107 steps in 372.0488 ms
17-02-28 20:21:31.754 -08 000000077 INF: Excitation Filter 2: Moved 107 steps in 371.8451 ms
17-02-28 20:21:31.754 -08 000000010 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.1522 ms
17-02-28 20:21:31.754 -08 000000010 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.2572 ms
17-02-28 20:21:31.754 -08 000000077 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.0751 ms
17-02-28 20:21:31.754 -08 000000077 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.2533 ms
17-02-28 20:21:31.755 -08 000000010 INF: ======================================
17-02-28 20:21:31.755 -08 000000077 INF: ======================================
17-02-28 20:21:31.756 -08 000000047 INF: Y Motor: Unshifted Position: 984900
17-02-28 20:21:31.756 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:31.756 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:31.756 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:31.757 -08 000000108 INF: ======================================
17-02-28 20:21:31.783 -08 000000051 INF: ======================================
17-02-28 20:21:31.784 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:21:31.785 -08 000000030 INF: ======================================
17-02-28 20:21:31.818 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:21:31.818 -08 000000047 INF: Y Motor: Moved to 14.8490 after 7861 ms
17-02-28 20:21:31.818 -08 000000047 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:31.883 -08 000000047 INF: Y Motor: Recv v 4097\r
17-02-28 20:21:31.883 -08 000000047 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:31.883 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:31.945 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:21:31.945 -08 000000047 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:31.945 -08 000000047 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:32.007 -08 000000047 INF: Y Motor: Recv v 134217728\r
17-02-28 20:21:32.007 -08 000000047 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:21:32.007 -08 000000047 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:32.007 -08 000000047 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:32.069 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:21:32.069 -08 000000047 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:32.069 -08 000000047 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:32.069 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:32.131 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:32.131 -08 000000047 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:32.131 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:32.193 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:32.193 -08 000000047 INF: ======================================
17-02-28 20:21:32.194 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:32.195 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:32.196 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.196 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:21:32.253 -08 000000035 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:21:32.253 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:32.315 -08 000000053 INF: FPGA: Recv TDIYERD 1484904
17-02-28 20:21:32.315 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:21:32.380 -08 000000033 INF: FPGA: Recv ZADCR 21465
17-02-28 20:21:32.380 -08 000000018 INF: At scan end Y pos = 14.849 and Z pos = -0.082. Y moved -48.539 mm
17-02-28 20:21:32.380 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:21:32.442 -08 000000087 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:21:32.442 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:21:32.442 -08 000000018 INF: TDIScan finished after 12640.069 ms
17-02-28 20:21:32.442 -08 000000018 INF: Image[0]: Y should trigger at 63.388 mm, 2nd row was at 64.297 mm (error = 0.909 mm)
17-02-28 20:21:32.442 -08 000000018 INF: Image[2]: Y should trigger at 63.388 mm, 2nd row was at 64.297 mm (error = 0.909 mm)
17-02-28 20:21:32.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.479 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.897 um
17-02-28 20:21:32.479 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.480 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:21:32.503 -08 000000034 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:21:32.504 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.504 -08 000000064 INF: ===================Dither Clean Up Command===================
17-02-28 20:21:32.504 -08 000000053 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:21:32.505 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:21:32.505 -08 000000072 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:21:32.505 -08 000000053 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:21:32.505 -08 000000053 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:21:32.505 -08 000000086 INF: ======================================
17-02-28 20:21:32.505 -08 000000072 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:21:32.505 -08 000000072 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:21:32.505 -08 000000105 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:21:32.505 -08 000000047 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:32.506 -08 000000105 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:21:32.508 -08 000000047 INF: ===================LFT:Extracting coords===================
17-02-28 20:21:32.534 -08 000000047 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:32.534 -08 000000047 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:21:32.535 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.535 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.535 -08 000000045 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.535 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.535 -08 000000087 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:32.536 -08 000000109 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:32.536 -08 000000081 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:32.536 -08 000000045 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:32.565 -08 000000010 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:32.565 -08 000000010 INF: FPGA: Recv ZSEL 
17-02-28 20:21:32.565 -08 000000105 INF: FPGA: Xmit ZDACW 20345\n
17-02-28 20:21:32.565 -08 000000072 INF: ======================================
17-02-28 20:21:32.567 -08 000000053 INF: Y Motor: Recv ok\r
17-02-28 20:21:32.567 -08 000000053 INF: ======================================
17-02-28 20:21:32.610 -08 000000109 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:32.610 -08 000000081 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:32.610 -08 000000045 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:32.611 -08 000000087 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:32.627 -08 000000073 INF: FPGA: Recv ZDACW 
17-02-28 20:21:32.628 -08 000000105 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:21:32.628 -08 000000105 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:21:32.693 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:21:32.693 -08 000000105 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:21:32.694 -08 000000105 INF: ======================================
17-02-28 20:21:32.761 -08 000000081 INF: LFT found best fwhm score 2.000026 in 151 ms
17-02-28 20:21:32.761 -08 000000081 INF: LFT found good score at index 573 with fwhm value 2.000026. Next cycle, cycle 4 starting Z position for bottom surface is at -0.058 mm FC:A, C:3,L:8,B
17-02-28 20:21:32.761 -08 000000045 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:21:32.761 -08 000000109 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:21:32.761 -08 000000045 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0578890523175129 in the next cycle, cycle 4 FC:A, C:3,L:8,B
17-02-28 20:21:32.761 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.761 -08 000000109 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0578890523175129 in the next cycle, cycle 4 FC:A, C:3,L:8,B
17-02-28 20:21:32.761 -08 000000045 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.762 -08 000000081 INF: ======================================
17-02-28 20:21:32.762 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.762 -08 000000045 INF: ======================================
17-02-28 20:21:32.762 -08 000000109 INF: ======================================
17-02-28 20:21:32.762 -08 000000087 INF: LFT found best fwhm score 2.005434 in 151 ms
17-02-28 20:21:32.762 -08 000000087 INF: LFT found good score at index 8565 with fwhm value 2.005434. Next cycle, cycle 4 starting Z position for bottom surface is at -0.058 mm FC:A, C:3,L:8,B
17-02-28 20:21:32.762 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.763 -08 000000087 INF: ======================================
17-02-28 20:21:32.764 -08 000000047 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:32.765 -08 000000047 INF: LFT weighted average best Z for bottom surface is at -0.058mm FC:A, C:3,L:8,B
17-02-28 20:21:32.765 -08 000000047 INF: ======================================
17-02-28 20:21:32.766 -08 000000064 INF: ======================================
17-02-28 20:21:32.767 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.768 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:21:32.768 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.768 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:21:32.769 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.769 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:21:32.769 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.769 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:21:32.769 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.769 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494===================
17-02-28 20:21:32.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494===================
17-02-28 20:21:32.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:21:32.771 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494===================
17-02-28 20:21:32.771 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module..., Waiting for image analysis===================
17-02-28 20:21:32.771 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:21:32.794 -08 000000018 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:21:32.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:32.794 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:32.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:32.795 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:21:32.795 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:32.795 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:21:32.795 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.796 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.796 -08 000000018 INF: EjectButton: EjectButton LED On
17-02-28 20:21:32.797 -08 000000018 INF: FPGA: Xmit LEDMODEPB 1\n
17-02-28 20:21:32.827 -08 000000010 INF: FPGA: Recv LEDMODEPB
17-02-28 20:21:32.830 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.831 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.832 -08 000000018 INF: LaserShutterArbiter: Request to Close; lock count was 0, will be 1
17-02-28 20:21:32.832 -08 000000018 INF: LaserShutter: Closing laser shutter
17-02-28 20:21:32.832 -08 000000018 INF: FPGA: Xmit SWLSRSHUT 0\n
17-02-28 20:21:32.839 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.839 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for analysis...===================
17-02-28 20:21:32.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for user to shut the door...===================
17-02-28 20:21:32.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for analysis...===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for user to shut the door...===================
17-02-28 20:21:32.842 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.842 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.842 -08 000000042 INF: EjectButton: EjectButton LED Off
17-02-28 20:21:32.842 -08 000000042 INF: FPGA: Xmit LEDMODEPB 0\n
17-02-28 20:21:32.843 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":8,"Tile":2201,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF236","HCSMMF226","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:32.948 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":8,"Tile":2202,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF199","HCSMMF181","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:32.948 -08 000000034 INF: FPGA: Recv SWLSRSHUT
17-02-28 20:21:32.949 -08 000000034 INF: FPGA: Recv LEDMODEPB
17-02-28 20:21:32.950 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.951 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":8,"Tile":2205,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF193","HCSMMF180","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:32.953 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:33.049 -08 000000042 INF: LaserShutterArbiter: Request to Open; lock count was 1, will be 0
17-02-28 20:21:33.049 -08 000000042 INF: LaserShutter: Opening laser shutter
17-02-28 20:21:33.049 -08 000000042 INF: FPGA: Xmit SWLSRSHUT 1\n
17-02-28 20:21:33.049 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:21:33.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:21:33.051 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":8,"Tile":2203,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF220","HCSMMF229","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.095 -08 000000066 INF: FPGA: Recv SWLSRSHUT
17-02-28 20:21:33.095 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":8,"Tile":2206,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF176","HCSMMF269","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.097 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":8,"Tile":2207,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF230","HCSMMF190","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.101 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":8,"Tile":2208,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF274","HCSMMF203","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.103 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":8,"Tile":2209,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF243","HCSMMF246","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.105 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":8,"Tile":2210,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF206","HCSMMF209","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.107 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":8,"Tile":2204,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF276","HCSMMF227","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.108 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":8,"Tile":2212,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF283","HCSMMF238","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.111 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":8,"Tile":2211,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF275","HCSMMF221","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.113 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":8,"Tile":2213,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF261","HCSMMF259","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.115 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":8,"Tile":2219,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF250","HCSMMF185","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.115 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":8,"Tile":2221,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF215","HCSMMF282","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.116 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":8,"Tile":2217,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF223","HCSMMF192","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.117 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":8,"Tile":2215,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF186","HCSMMF252","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.118 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":8,"Tile":2214,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF267","HCSMMF258","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.119 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":8,"Tile":2218,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF182","HCSMMF218","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.119 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":8,"Tile":2222,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF284","HCSMMF179","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.120 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":8,"Tile":2220,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF247","HCSMMF204","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.121 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":8,"Tile":2223,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF279","HCSMMF240","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.122 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":8,"Tile":2226,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF210","HCSMMF219","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.122 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":8,"Tile":2216,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF265","HCSMMF281","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.123 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":8,"Tile":2224,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF278","HCSMMF178","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.124 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":8,"Tile":2225,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF280","HCSMMF231","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.125 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":8,"Tile":2228,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF239","HCSMMF194","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.127 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3===================
17-02-28 20:21:33.128 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":8,"Tile":2227,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF183","HCSMMF255","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.128 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX)===================
17-02-28 20:21:33.138 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:33.145 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:21:33.195 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:33.196 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:21:33.196 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:21:33.196 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:21:33.196 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:21:33.243 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:33.243 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:21:33.279 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:33.285 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:21:33.359 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:33.365 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:21:33.485 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:33.490 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:21:33.581 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:33.597 -08 000000025 INF: FPGA: Recv MIOCOMPF
17-02-28 20:21:33.597 -08 000000042 INF: Compensator: Moved IntoPath in 401 ms
17-02-28 20:21:33.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:21:33.598 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:21:33.598 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:21:33.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:21:33.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:21:33.600 -08 000000073 INF: ===================Move Tilt Motor 1===================
17-02-28 20:21:33.600 -08 000000069 INF: ===================Move Tilt Motor 3===================
17-02-28 20:21:33.600 -08 000000073 INF: Tilt Motor 1: Moving to 4.9990 mm, started at 5.0731 mm, delta = -0.0742 mm
17-02-28 20:21:33.600 -08 000000046 INF: ===================Move Tilt Motor 2===================
17-02-28 20:21:33.600 -08 000000069 INF: Tilt Motor 3: Moving to 5.3404 mm, started at 5.3317 mm, delta = 0.0086 mm
17-02-28 20:21:33.600 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:33.600 -08 000000046 INF: Tilt Motor 2: Moving to 5.3939 mm, started at 5.3053 mm, delta = 0.0886 mm
17-02-28 20:21:33.603 -08 000000069 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:33.604 -08 000000046 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:33.659 -08 000000023 INF: FPGA: Recv T1RD 19973
17-02-28 20:21:33.659 -08 000000023 INF: FPGA: Recv T3RD 20990
17-02-28 20:21:33.659 -08 000000023 INF: FPGA: Recv T2RD 20887
17-02-28 20:21:33.659 -08 000000046 INF: Tilt Motor 2: Encoder: at motor step 3481 + 1/6
17-02-28 20:21:33.659 -08 000000046 INF: Tilt Motor 2: Moving to 21236 encoder counts
17-02-28 20:21:33.659 -08 000000046 INF: FPGA: Xmit T2MOVETO 21236\n
17-02-28 20:21:33.659 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3328 + 5/6
17-02-28 20:21:33.659 -08 000000073 INF: Tilt Motor 1: Moving to 19681 encoder counts
17-02-28 20:21:33.659 -08 000000069 INF: Tilt Motor 3: Encoder: at motor step 3498 + 2/6
17-02-28 20:21:33.659 -08 000000069 INF: Tilt Motor 3: Moving to 21025 encoder counts
17-02-28 20:21:33.660 -08 000000069 INF: FPGA: Xmit T3MOVETO 21025\n
17-02-28 20:21:33.662 -08 000000073 INF: FPGA: Xmit T1MOVETO 19681\n
17-02-28 20:21:33.785 -08 000000087 INF: FPGA: Recv T3MOVETO 5
17-02-28 20:21:33.786 -08 000000069 INF: Tilt Motor 3: To move from 5.331 to 5.340 (0.009 mm) should take 6 steps, but required 5 steps (0.008 mm). Slippage = -0.002 mm (-0.18%)
17-02-28 20:21:33.786 -08 000000069 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:33.846 -08 000000034 INF: FPGA: Recv T3RD 21021
17-02-28 20:21:33.846 -08 000000034 INF: FPGA: Recv T1MOVETO 48
17-02-28 20:21:33.846 -08 000000034 INF: FPGA: Recv T2MOVETO 57
17-02-28 20:21:33.846 -08 000000046 INF: Tilt Motor 2: To move from 5.305 to 5.394 (0.089 mm) should take 58 steps, but required 57 steps (0.087 mm). Slippage = -0.002 mm (-0.02%)
17-02-28 20:21:33.846 -08 000000073 INF: Tilt Motor 1: To move from 5.073 to 4.999 (-0.074 mm) should take 49 steps, but required 48 steps (0.073 mm). Slippage = -0.002 mm (0.02%)
17-02-28 20:21:33.846 -08 000000046 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:33.846 -08 000000069 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:21:33.847 -08 000000069 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:33.849 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:33.863 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:21:33.907 -08 000000101 INF: FPGA: Recv T2RD 21230
17-02-28 20:21:33.907 -08 000000101 INF: FPGA: Recv T3RD 21020
17-02-28 20:21:33.907 -08 000000101 INF: FPGA: Recv T1RD 19687
17-02-28 20:21:33.907 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:21:33.907 -08 000000069 INF: Tilt Motor 3: Encoder: at motor step 3503 + 2/6
17-02-28 20:21:33.907 -08 000000046 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:21:33.907 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:33.910 -08 000000069 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:33.911 -08 000000046 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:33.969 -08 000000074 INF: FPGA: Recv T1RD 19687
17-02-28 20:21:33.969 -08 000000074 INF: FPGA: Recv T3RD 21020
17-02-28 20:21:33.969 -08 000000074 INF: FPGA: Recv T2RD 21230
17-02-28 20:21:33.969 -08 000000046 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:21:33.969 -08 000000046 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:33.969 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:21:33.970 -08 000000069 INF: Tilt Motor 3: Encoder: at motor step 3503 + 2/6
17-02-28 20:21:33.970 -08 000000069 INF: Tilt Motor 3: After move to 5.3404, error = -0.0013, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:33.970 -08 000000069 INF: Tilt Motor 3: Moved to 5.3391 after 370.0298 ms
17-02-28 20:21:33.971 -08 000000069 INF: ======================================
17-02-28 20:21:33.972 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:34.031 -08 000000082 INF: FPGA: Recv T2RD 21230
17-02-28 20:21:34.031 -08 000000082 INF: FPGA: Recv T1RD 19687
17-02-28 20:21:34.031 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:21:34.031 -08 000000073 INF: Tilt Motor 1: After move to 4.9990, error = 0.0015, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:34.031 -08 000000046 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:21:34.031 -08 000000046 INF: Tilt Motor 2: After move to 5.3939, error = -0.0015, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:34.031 -08 000000073 INF: Tilt Motor 1: Moved to 5.0005 after 431.4091 ms
17-02-28 20:21:34.032 -08 000000046 INF: Tilt Motor 2: Moved to 5.3924 after 431.3114 ms
17-02-28 20:21:34.032 -08 000000073 INF: ======================================
17-02-28 20:21:34.032 -08 000000046 INF: ======================================
17-02-28 20:21:34.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:21:34.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:21:34.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:21:34.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:21:34.050 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:34.050 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:34.051 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:21:34.051 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:21:34.099 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:21:34.099 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:34.099 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:21:34.099 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n