17-02-28 20:03:38.964 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3===================
17-02-28 20:03:38.965 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:03:38.965 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:03:38.966 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:03:38.966 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:03:38.966 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:38.985 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:03:38.985 -08 000000031 INF: Y Motor: Start the move command
17-02-28 20:03:38.985 -08 000000031 INF: Y Motor: Xmit t 1\r
17-02-28 20:03:39.040 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:39.040 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:39.042 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:39.042 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:39.046 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:03:39.046 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Selecting Reagent HB2 (8)===================
17-02-28 20:03:39.046 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:03:39.046 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-02-28 20:03:39.047 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:03:39.047 -08 000000031 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:03:39.047 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.174 -08 000000031 INF: Y Motor: Unshifted Position: 5934930
17-02-28 20:03:39.190 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:39.190 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:39.192 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:39.192 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:39.224 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.340 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:03:39.340 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:03:39.340 -08 000000036 INF: ===================Camera #0 Frame #1===================
17-02-28 20:03:39.342 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:03:39.342 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:03:39.342 -08 000000067 INF: ===================Camera #2 Frame #1===================
17-02-28 20:03:39.349 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.486 -08 000000031 INF: Y Motor: Unshifted Position: 5888074
17-02-28 20:03:39.493 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:03:39.493 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:03:39.493 -08 000000036 INF: ===================Camera #0 Frame #3===================
17-02-28 20:03:39.496 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:03:39.496 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:03:39.496 -08 000000067 INF: ===================Camera #2 Frame #3===================
17-02-28 20:03:39.536 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.545 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:03:39.545 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:39.545 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:39.609 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:03:39.617 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:03:39.649 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:03:39.649 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:03:39.649 -08 000000036 INF: ===================Camera #0 Frame #4===================
17-02-28 20:03:39.653 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:03:39.653 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:03:39.653 -08 000000067 INF: ===================Camera #2 Frame #4===================
17-02-28 20:03:39.660 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.709 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:03:39.797 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:03:39.797 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:03:39.798 -08 000000031 INF: Y Motor: Unshifted Position: 5841571
17-02-28 20:03:39.802 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:03:39.802 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:03:39.802 -08 000000036 INF: ===================Camera #0 Frame #5===================
17-02-28 20:03:39.807 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:03:39.807 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:03:39.807 -08 000000067 INF: ===================Camera #2 Frame #5===================
17-02-28 20:03:39.848 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.856 -08 000000099 INF: FPGA: Recv ZWAIT 
17-02-28 20:03:39.856 -08 000000099 INF: FPGA: Recv TDIYWAIT
17-02-28 20:03:39.856 -08 000000097 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:03:39.857 -08 000000068 INF: ===================Serial===================
17-02-28 20:03:39.858 -08 000000097 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:03:39.858 -08 000000068 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:03:39.858 -08 000000068 INF: ===================Serial===================
17-02-28 20:03:39.859 -08 000000087 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:03:39.859 -08 000000032 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:03:39.859 -08 000000087 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:03:39.859 -08 000000087 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:03:39.859 -08 000000087 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:03:39.859 -08 000000087 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:03:39.859 -08 000000032 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:03:39.859 -08 000000032 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:03:39.859 -08 000000032 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:03:39.860 -08 000000032 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:03:39.860 -08 000000068 INF: ======================================
17-02-28 20:03:39.897 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:03:39.955 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:03:39.955 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:03:39.955 -08 000000036 INF: ===================Camera #0 Frame #6===================
17-02-28 20:03:39.958 -08 000000036 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:03:39.959 -08 000000036 INF: ===================CameraTDI Cleanup===================
17-02-28 20:03:39.973 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:39.973 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:03:39.973 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:03:39.973 -08 000000067 INF: ===================Camera #2 Frame #6===================
17-02-28 20:03:39.977 -08 000000067 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:03:39.978 -08 000000067 INF: ===================CameraTDI Cleanup===================
17-02-28 20:03:39.982 -08 000000036 INF: Camera #0 ReleaseBuffer
17-02-28 20:03:39.982 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:03:39.984 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:39.984 -08 000000036 INF: ======================================
17-02-28 20:03:40.008 -08 000000067 INF: Camera #2 ReleaseBuffer
17-02-28 20:03:40.008 -08 000000067 INF: ===================Camera TDI===================
17-02-28 20:03:40.009 -08 000000067 INF: ======================================
17-02-28 20:03:40.011 -08 000000054 INF: ===================Camera TDI===================
17-02-28 20:03:40.012 -08 000000054 INF: ======================================
17-02-28 20:03:40.084 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:40.109 -08 000000031 INF: Y Motor: Unshifted Position: 5797055
17-02-28 20:03:40.159 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:40.172 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:40.231 -08 000000030 INF: FPGA: Recv EX1MV
17-02-28 20:03:40.231 -08 000000030 INF: FPGA: Recv EX2MV
17-02-28 20:03:40.231 -08 000000032 INF: Excitation Filter 2: Moved 107 steps in 371.5679 ms
17-02-28 20:03:40.231 -08 000000032 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.6725 ms
17-02-28 20:03:40.231 -08 000000032 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.7492 ms
17-02-28 20:03:40.231 -08 000000087 INF: Excitation Filter 1: Moved 107 steps in 371.7808 ms
17-02-28 20:03:40.231 -08 000000087 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.0032 ms
17-02-28 20:03:40.231 -08 000000087 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.0789 ms
17-02-28 20:03:40.231 -08 000000032 INF: ======================================
17-02-28 20:03:40.231 -08 000000087 INF: ======================================
17-02-28 20:03:40.233 -08 000000097 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:03:40.234 -08 000000097 INF: ======================================
17-02-28 20:03:40.296 -08 000000031 INF: Y Motor: Unshifted Position: 5797041
17-02-28 20:03:40.296 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:03:40.296 -08 000000031 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:40.358 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:03:40.358 -08 000000031 INF: Y Motor: Moved to 62.9704 after 1311 ms
17-02-28 20:03:40.358 -08 000000031 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:03:40.420 -08 000000031 INF: Y Motor: Recv v 4097\r
17-02-28 20:03:40.420 -08 000000031 INF: Y Motor: Status After move finished OK:
17-02-28 20:03:40.420 -08 000000031 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:40.422 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:40.481 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:03:40.482 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:03:40.482 -08 000000031 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:40.482 -08 000000031 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:03:40.547 -08 000000031 INF: Y Motor: Recv v 134217728\r
17-02-28 20:03:40.547 -08 000000031 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:03:40.547 -08 000000031 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:03:40.547 -08 000000031 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:03:40.581 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:03:40.609 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:03:40.609 -08 000000031 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:03:40.609 -08 000000031 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:03:40.609 -08 000000031 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:40.670 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:40.671 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:03:40.671 -08 000000031 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:03:40.671 -08 000000031 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:40.733 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:03:40.733 -08 000000031 INF: ======================================
17-02-28 20:03:40.735 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:03:40.736 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:03:40.737 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:40.737 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:03:40.770 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:40.793 -08 000000080 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:03:40.793 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:03:40.855 -08 000000025 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:03:40.855 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:03:40.856 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:03:40.856 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:03:40.918 -08 000000027 INF: FPGA: Recv ZADCR 2426
17-02-28 20:03:40.918 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:03:40.918 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:03:40.956 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP18240R\r
17-02-28 20:03:40.982 -08 000000045 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:03:40.982 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:03:40.982 -08 000000042 INF: TDIScan finished after 6853.3145 ms
17-02-28 20:03:40.982 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:03:40.982 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:03:40.982 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:03:41.044 -08 000000055 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:03:41.045 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:41.045 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.045 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.046 -08 000000036 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:03:41.046 -08 000000025 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:03:41.046 -08 000000054 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:03:41.046 -08 000000036 INF: ======================================
17-02-28 20:03:41.046 -08 000000054 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:03:41.047 -08 000000054 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:03:41.047 -08 000000025 INF: ======================================
17-02-28 20:03:41.106 -08 000000054 INF: Y Motor: Recv ok\r
17-02-28 20:03:41.106 -08 000000054 INF: ======================================
17-02-28 20:03:41.107 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.108 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.109 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:03:41.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.135 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:03:41.145 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:41.160 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.160 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:03:41.186 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.186 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:03:41.210 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:03:41.211 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:03:41.211 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:03:41.212 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:03:41.220 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:03:41.220 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:03:41.220 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:03:41.231 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:41.481 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:41.544 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:41.794 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:41.854 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:41.906 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:03:41.930 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.081961519937134Best Z position at top surface = -0.153076123602626Best Z position at top surface + compensator offset = -0.130376123602626 C:2,L:2,T
17-02-28 20:03:41.931 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.153076123602626
17-02-28 20:03:41.931 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94346
17-02-28 20:03:41.931 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.081961519937134
17-02-28 20:03:41.931 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.60123
17-02-28 20:03:41.931 -08 000000042 INF: Z-height at LaneTopSurface is -0.153076123602626.
17-02-28 20:03:41.931 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:03:42.066 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:03:42.066 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:03:42.104 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:42.105 -08 000000077 INF: FPGA: Recv ZSTEP 
17-02-28 20:03:42.105 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:03:42.107 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.107 -08 000000042 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:03:42.107 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.108 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.108 -08 000000036 INF: ===================Move Tilt Motor 1===================
17-02-28 20:03:42.108 -08 000000085 INF: ===================Move Tilt Motor 2===================
17-02-28 20:03:42.109 -08 000000094 INF: ===================Move Tilt Motor 3===================
17-02-28 20:03:42.109 -08 000000036 INF: Tilt Motor 1: Moving to 5.0005 mm, started at 5.0020 mm, delta = -0.0015 mm
17-02-28 20:03:42.109 -08 000000036 INF: FPGA: Xmit T1RD\n
17-02-28 20:03:42.109 -08 000000085 INF: Tilt Motor 2: Moving to 5.3939 mm, started at 5.3924 mm, delta = 0.0015 mm
17-02-28 20:03:42.109 -08 000000094 INF: Tilt Motor 3: Moving to 5.3391 mm, started at 5.3378 mm, delta = 0.0013 mm
17-02-28 20:03:42.110 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:03:42.112 -08 000000094 INF: FPGA: Xmit T3RD\n
17-02-28 20:03:42.167 -08 000000084 INF: FPGA: Recv T1RD 19693
17-02-28 20:03:42.167 -08 000000084 INF: FPGA: Recv T2RD 21230
17-02-28 20:03:42.167 -08 000000084 INF: FPGA: Recv T3RD 21014
17-02-28 20:03:42.167 -08 000000036 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:03:42.167 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:03:42.167 -08 000000085 INF: Tilt Motor 2: Moving to 21236 encoder counts
17-02-28 20:03:42.167 -08 000000094 INF: Tilt Motor 3: Encoder: at motor step 3502 + 2/6
17-02-28 20:03:42.167 -08 000000085 INF: FPGA: Xmit T2MOVETO 21236\n
17-02-28 20:03:42.167 -08 000000094 INF: Tilt Motor 3: Moving to 21020 encoder counts
17-02-28 20:03:42.167 -08 000000036 INF: Tilt Motor 1: Moving to 19687 encoder counts
17-02-28 20:03:42.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:42.168 -08 000000094 INF: FPGA: Xmit T3MOVETO 21020\n
17-02-28 20:03:42.170 -08 000000036 INF: FPGA: Xmit T1MOVETO 19687\n
17-02-28 20:03:42.291 -08 000000030 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:03:42.291 -08 000000030 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:03:42.291 -08 000000030 INF: FPGA: Recv T1MOVETO 1
17-02-28 20:03:42.291 -08 000000036 INF: Tilt Motor 1: To move from 5.002 to 5.000 (-0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:03:42.291 -08 000000094 INF: Tilt Motor 3: To move from 5.338 to 5.339 (0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:03:42.291 -08 000000085 INF: Tilt Motor 2: To move from 5.392 to 5.394 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:03:42.291 -08 000000036 INF: FPGA: Xmit T1RD\n
17-02-28 20:03:42.292 -08 000000094 INF: FPGA: Xmit T3RD\n
17-02-28 20:03:42.294 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:03:42.353 -08 000000027 INF: FPGA: Recv T1RD 19687
17-02-28 20:03:42.353 -08 000000027 INF: FPGA: Recv T3RD 21021
17-02-28 20:03:42.353 -08 000000027 INF: FPGA: Recv T2RD 21236
17-02-28 20:03:42.353 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3539 + 2/6
17-02-28 20:03:42.353 -08 000000036 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:03:42.353 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:03:42.353 -08 000000094 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:03:42.354 -08 000000036 INF: FPGA: Xmit T1RD\n
17-02-28 20:03:42.356 -08 000000094 INF: FPGA: Xmit T3RD\n
17-02-28 20:03:42.415 -08 000000083 INF: FPGA: Recv T2RD 21236
17-02-28 20:03:42.415 -08 000000083 INF: FPGA: Recv T1RD 19687
17-02-28 20:03:42.415 -08 000000083 INF: FPGA: Recv T3RD 21021
17-02-28 20:03:42.415 -08 000000036 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:03:42.415 -08 000000094 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:03:42.415 -08 000000036 INF: FPGA: Xmit T1RD\n
17-02-28 20:03:42.415 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3539 + 2/6
17-02-28 20:03:42.416 -08 000000094 INF: FPGA: Xmit T3RD\n
17-02-28 20:03:42.418 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:42.418 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:03:42.477 -08 000000039 INF: FPGA: Recv T1RD 19687
17-02-28 20:03:42.477 -08 000000039 INF: FPGA: Recv T3RD 21021
17-02-28 20:03:42.477 -08 000000039 INF: FPGA: Recv T2RD 21236
17-02-28 20:03:42.477 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3539 + 2/6
17-02-28 20:03:42.477 -08 000000036 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:03:42.477 -08 000000094 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:03:42.477 -08 000000036 INF: Tilt Motor 1: After move to 5.0005, error = 0.0000, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:03:42.477 -08 000000094 INF: Tilt Motor 3: After move to 5.3391, error = 0.0003, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:03:42.477 -08 000000036 INF: Tilt Motor 1: Moved to 5.0005 after 368.4567 ms
17-02-28 20:03:42.477 -08 000000094 INF: Tilt Motor 3: Moved to 5.3393 after 368.3251 ms
17-02-28 20:03:42.477 -08 000000085 INF: Tilt Motor 2: After move to 5.3939, error = 0.0000, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:03:42.477 -08 000000085 INF: Tilt Motor 2: Moved to 5.3939 after 368.6106 ms
17-02-28 20:03:42.477 -08 000000036 INF: ======================================
17-02-28 20:03:42.477 -08 000000094 INF: ======================================
17-02-28 20:03:42.478 -08 000000085 INF: ======================================
17-02-28 20:03:42.478 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:42.478 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.479 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.480 -08 000000042 INF: ETF Best Z: -0.1303761 mm (34177 DAC)
17-02-28 20:03:42.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.481 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:03:42.481 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:03:42.909 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:42.909 -08 000000030 INF: FPGA: Recv MIOCOMPF
17-02-28 20:03:42.909 -08 000000042 INF: Compensator: Moved IntoPath in 428 ms
17-02-28 20:03:42.910 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:42.917 -08 000000042 INF: Swath 1 position calculated to be: {X=71.39664, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:03:42.917 -08 000000042 INF: Swath 2 position calculated to be: {X=72.50464, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:03:42.923 -08 000000042 INF: Swath 0: Converted transform from (-49.84806, 8.130718) pixels to (-0.01725, 0.00276) mm.
17-02-28 20:03:42.929 -08 000000042 INF: Swath 1: Converted transform from (-65.66621, 7.260032) pixels to (-0.02277, 0.002415) mm.
17-02-28 20:03:42.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:03:42.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:03:42.930 -08 000000042 INF: Transformed XStagePosition from 71.39664 mm to 71.3793869633228 mm.
17-02-28 20:03:42.941 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.55584935553 mm.
17-02-28 20:03:42.941 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.35584935553 mm.
17-02-28 20:03:42.941 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.44659935553 mm.
17-02-28 20:03:42.943 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:42.943 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:03:42.944 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:42.944 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = B_1
17-02-28 20:03:42.952 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:03:42.952 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:03:42.953 -08 000000098 INF: ===================MoveEmissionFilters===================
17-02-28 20:03:42.953 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:03:42.953 -08 000000031 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:03:42.954 -08 000000069 INF: ===================Move X,Y, Parallel===================
17-02-28 20:03:42.954 -08 000000029 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:03:42.954 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:03:42.954 -08 000000077 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:03:42.954 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:03:42.954 -08 000000031 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:03:42.954 -08 000000031 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:03:42.955 -08 000000031 INF: Z Motor: Moving to -0.1504 mm, started at -0.0100 mm
17-02-28 20:03:42.955 -08 000000054 INF: ===================Move X Motor without settling===================
17-02-28 20:03:42.955 -08 000000031 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:03:42.955 -08 000000029 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:03:42.955 -08 000000077 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:03:42.955 -08 000000054 INF: X Motor: Xmit PR VM\n
17-02-28 20:03:42.955 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:03:42.955 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:03:42.955 -08 000000095 INF: ===================Move Y Motor without settling===================
17-02-28 20:03:42.955 -08 000000095 INF: Y Motor: Moving to 64.5558 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:03:42.956 -08 000000039 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:03:42.956 -08 000000095 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:03:42.956 -08 000000025 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:03:42.956 -08 000000036 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:03:42.956 -08 000000025 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:03:42.956 -08 000000094 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:03:42.956 -08 000000087 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:03:42.956 -08 000000095 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:42.956 -08 000000097 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:03:42.956 -08 000000039 INF: ======================================
17-02-28 20:03:42.956 -08 000000085 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:03:42.956 -08 000000094 INF: ======================================
17-02-28 20:03:42.957 -08 000000097 INF: ======================================
17-02-28 20:03:42.957 -08 000000085 INF: ======================================
17-02-28 20:03:42.957 -08 000000065 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:03:42.957 -08 000000036 INF: ======================================
17-02-28 20:03:42.957 -08 000000065 INF: ======================================
17-02-28 20:03:42.958 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:03:42.959 -08 000000077 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:03:42.959 -08 000000025 INF: ======================================
17-02-28 20:03:42.959 -08 000000087 INF: ======================================
17-02-28 20:03:42.960 -08 000000055 INF: ======================================
17-02-28 20:03:42.960 -08 000000077 INF: ======================================
17-02-28 20:03:42.960 -08 000000029 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:03:42.960 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:03:42.961 -08 000000029 INF: ======================================
17-02-28 20:03:42.962 -08 000000078 INF: ======================================
17-02-28 20:03:42.962 -08 000000098 INF: ======================================
17-02-28 20:03:42.963 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:43.023 -08 000000085 INF: FPGA: Recv ZTRG 
17-02-28 20:03:43.023 -08 000000031 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:03:43.025 -08 000000054 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:03:43.025 -08 000000054 INF: X Motor: Xmit PR VI\n
17-02-28 20:03:43.025 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:03:43.025 -08 000000095 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:03:43.025 -08 000000095 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:43.088 -08 000000070 INF: FPGA: Recv ZYT 
17-02-28 20:03:43.088 -08 000000031 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:03:43.088 -08 000000031 INF: FPGA: Xmit ZMV 39420\n
17-02-28 20:03:43.090 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:03:43.090 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:43.090 -08 000000054 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:03:43.090 -08 000000054 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:03:43.090 -08 000000054 INF: X Motor: Moving to 71.3794 mm @15.000 mm/sec, started at 71.9517 mm
17-02-28 20:03:43.090 -08 000000054 INF: X Motor: Xmit MA 5071\n
17-02-28 20:03:43.149 -08 000000036 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:03:43.149 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:03:43.151 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:03:43.151 -08 000000095 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:43.151 -08 000000095 INF: Y Motor: Set target position to 5955585 encoder counts
17-02-28 20:03:43.151 -08 000000095 INF: Y Motor: Xmit s r0xca 5955585\r
17-02-28 20:03:43.151 -08 000000054 INF: X Motor: Recv MA 5071\r\n>
17-02-28 20:03:43.152 -08 000000054 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:03:43.213 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:03:43.213 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:43.213 -08 000000095 INF: Y Motor: Start the move command
17-02-28 20:03:43.213 -08 000000095 INF: Y Motor: Xmit t 1\r
17-02-28 20:03:43.275 -08 000000030 INF: FPGA: Recv ZMV 
17-02-28 20:03:43.275 -08 000000031 INF: Z Motor: MoveAndTrigger 'ZMV' command took 186.9068 ms
17-02-28 20:03:43.275 -08 000000031 INF: FPGA: Xmit ZDACR\n
17-02-28 20:03:43.276 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:43.277 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:03:43.277 -08 000000095 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:03:43.277 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:43.338 -08 000000040 INF: FPGA: Recv ZDACR 39420
17-02-28 20:03:43.338 -08 000000031 INF: Z Motor: MoveAndTrigger took 383.2059 ms w/comms
17-02-28 20:03:43.338 -08 000000031 INF: Z Motor: After move to -0.1504, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:03:43.338 -08 000000031 INF: Z Motor: MoveAbsStepped took 383.3975 ms
17-02-28 20:03:43.338 -08 000000031 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:03:43.339 -08 000000031 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:03:43.340 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:03:43.340 -08 000000084 INF: ===================Camera Arm TDI===================
17-02-28 20:03:43.341 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:43.341 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:03:43.342 -08 000000085 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:03:43.342 -08 000000084 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:03:43.342 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:03:43.342 -08 000000085 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:03:43.398 -08 000000065 INF: FPGA: Recv ZSEL 
17-02-28 20:03:43.398 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:03:43.398 -08 000000085 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:03:43.399 -08 000000095 INF: Y Motor: Unshifted Position: 5880597
17-02-28 20:03:43.449 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:43.462 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:03:43.462 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:03:43.463 -08 000000085 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:03:43.464 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:43.465 -08 000000085 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:03:43.465 -08 000000085 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:03:43.465 -08 000000085 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:03:43.524 -08 000000068 INF: FPGA: Recv ZSTEP 
17-02-28 20:03:43.524 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:43.526 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:43.526 -08 000000085 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:03:43.526 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:43.528 -08 000000085 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:03:43.528 -08 000000085 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:03:43.528 -08 000000085 INF: Z Motor: Arming to move to -0.1104 mm
17-02-28 20:03:43.528 -08 000000085 INF: FPGA: Xmit ZYT 6435585 4\n
17-02-28 20:03:43.576 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:43.586 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:03:43.586 -08 000000085 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6380597 enc / 63.806 mm / ) = 6435585 enc / 64.356 mm
17-02-28 20:03:43.586 -08 000000085 INF: FPGA: Xmit ZARM 28934\n
17-02-28 20:03:43.587 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:43.588 -08 000000054 INF: X Motor: Xmit PR ER\n
17-02-28 20:03:43.648 -08 000000081 INF: FPGA: Recv ZARM
17-02-28 20:03:43.648 -08 000000085 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8686 ms
17-02-28 20:03:43.648 -08 000000085 INF: Z Motor: ArmAbsStepped took 119.842 ms
17-02-28 20:03:43.648 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:43.649 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:03:43.650 -08 000000054 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:03:43.650 -08 000000054 INF: X Motor: Moved to 71.3804 after 498 ms
17-02-28 20:03:43.650 -08 000000054 INF: ======================================
17-02-28 20:03:43.651 -08 000000085 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:03:43.651 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:03:43.653 -08 000000085 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:03:43.653 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:03:43.654 -08 000000085 INF: ======================================
17-02-28 20:03:43.711 -08 000000095 INF: Y Motor: Unshifted Position: 5955587
17-02-28 20:03:43.711 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:03:43.711 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:43.776 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:03:43.776 -08 000000095 INF: Y Motor: Moved to 64.5559 after 499 ms
17-02-28 20:03:43.776 -08 000000095 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:03:43.837 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:43.838 -08 000000095 INF: Y Motor: Recv v 4096\r
17-02-28 20:03:43.838 -08 000000095 INF: Y Motor: Status After move finished OK:
17-02-28 20:03:43.838 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:43.900 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:43.901 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:03:43.901 -08 000000095 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:43.901 -08 000000095 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:03:43.963 -08 000000095 INF: Y Motor: Recv v 402653184\r
17-02-28 20:03:43.963 -08 000000095 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:03:43.963 -08 000000095 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:03:43.963 -08 000000095 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:03:44.025 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:03:44.025 -08 000000095 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:03:44.025 -08 000000095 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:03:44.025 -08 000000095 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:44.087 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:03:44.087 -08 000000095 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:03:44.087 -08 000000095 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:44.149 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:03:44.149 -08 000000095 INF: ======================================
17-02-28 20:03:44.150 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:44.150 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:03:44.151 -08 000000069 INF: ======================================
17-02-28 20:03:44.210 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:44.313 -08 000000084 INF: Camera #0 AttachBuffer (imageDataPtr = 56909434928 imgPtr = 56909434928 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:03:44.314 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:03:44.314 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:03:44.329 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:03:44.331 -08 000000084 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:03:44.460 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:44.524 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:44.774 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:44.835 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:45.087 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:45.147 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:45.336 -08 000000084 INF: Camera #2 AttachBuffer (imageDataPtr = 58721374256 imgPtr = 59627343920 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:03:45.336 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:03:45.336 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:03:45.351 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:03:45.353 -08 000000084 INF: ===================Camera Arm TDI===================
17-02-28 20:03:45.354 -08 000000084 INF: ======================================
17-02-28 20:03:45.355 -08 000000031 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:03:45.356 -08 000000031 INF: ======================================
17-02-28 20:03:45.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:03:45.358 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:45.358 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:03:45.358 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:03:45.397 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:45.459 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:45.460 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:03:45.460 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:03:45.520 -08 000000036 INF: FPGA: Recv ZFREQCL
17-02-28 20:03:45.520 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:03:45.520 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:45.521 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:03:45.582 -08 000000092 INF: FPGA: Recv TDIYERD 6455585
17-02-28 20:03:45.582 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455585 counts (64.556 mm)
17-02-28 20:03:45.582 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:03:45.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:03:45.583 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:03:45.583 -08 000000101 INF: ===================Set YMotor gains for scans===================
17-02-28 20:03:45.584 -08 000000101 INF: ======================================
17-02-28 20:03:45.584 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:03:45.585 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:03:45.585 -08 000000073 INF: FPGA: Xmit TDIYPOS 6344660\n
17-02-28 20:03:45.644 -08 000000077 INF: FPGA: Recv TDIYPOS
17-02-28 20:03:45.644 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:03:45.645 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:03:45.646 -08 000000073 INF: FPGA: Xmit TDIYARM3 139264 6435585 1 1\n
17-02-28 20:03:45.706 -08 000000080 INF: FPGA: Recv TDIYARM3
17-02-28 20:03:45.706 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:03:45.707 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:03:45.708 -08 000000073 INF: ======================================
17-02-28 20:03:45.709 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:45.709 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:03:45.710 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:45.710 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:45.710 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:45.711 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:45.712 -08 000000039 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:03:45.712 -08 000000085 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:03:45.712 -08 000000039 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:03:45.712 -08 000000039 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:03:45.712 -08 000000039 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:03:45.712 -08 000000039 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:03:45.712 -08 000000085 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:03:45.712 -08 000000085 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:03:45.712 -08 000000085 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:03:45.713 -08 000000085 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:03:45.772 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:46.022 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:46.083 -08 000000094 INF: FPGA: Recv EX2MV
17-02-28 20:03:46.083 -08 000000094 INF: FPGA: Recv EX1MV
17-02-28 20:03:46.083 -08 000000085 INF: Excitation Filter 1: Moved -107 steps in 370.8323 ms
17-02-28 20:03:46.083 -08 000000039 INF: Excitation Filter 2: Moved -107 steps in 371.0334 ms
17-02-28 20:03:46.083 -08 000000085 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 370.9281 ms
17-02-28 20:03:46.083 -08 000000085 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 371.0756 ms
17-02-28 20:03:46.083 -08 000000039 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 371.117 ms
17-02-28 20:03:46.083 -08 000000039 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 371.2866 ms
17-02-28 20:03:46.083 -08 000000085 INF: ======================================
17-02-28 20:03:46.083 -08 000000039 INF: ======================================
17-02-28 20:03:46.084 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:46.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:46.086 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:46.086 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:03:46.086 -08 000000030 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:03:46.086 -08 000000084 INF: ===================FPGA Z Wait===================
17-02-28 20:03:46.087 -08 000000068 INF: ===================Move Y Motor without settling===================
17-02-28 20:03:46.087 -08 000000068 INF: Y Motor: Moving to 14.9075 mm @6.500 mm/sec, started at 64.5559 mm
17-02-28 20:03:46.087 -08 000000068 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:03:46.087 -08 000000068 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:46.087 -08 000000084 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:03:46.087 -08 000000090 INF: ===================Camera TDI, Parallel===================
17-02-28 20:03:46.087 -08 000000030 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:03:46.088 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:03:46.088 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:03:46.090 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:46.090 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:46.090 -08 000000030 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:03:46.090 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:46.090 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:46.147 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:03:46.147 -08 000000068 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:03:46.147 -08 000000068 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:46.210 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:03:46.210 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:46.241 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:46.241 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:46.241 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:46.241 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:46.272 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:03:46.272 -08 000000068 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:46.272 -08 000000068 INF: Y Motor: Set target position to 990751 encoder counts
17-02-28 20:03:46.272 -08 000000068 INF: Y Motor: Xmit s r0xca 990751\r
17-02-28 20:03:46.334 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:03:46.334 -08 000000068 INF: Y Motor: Start the move command
17-02-28 20:03:46.334 -08 000000068 INF: Y Motor: Xmit t 1\r
17-02-28 20:03:46.335 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:46.391 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:46.391 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:46.391 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:46.391 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:46.397 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:46.398 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:03:46.398 -08 000000068 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:03:46.398 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:46.458 -08 000000083 INF: FPGA: Recv ZWAIT 
17-02-28 20:03:46.458 -08 000000084 INF: ======================================
17-02-28 20:03:46.520 -08 000000068 INF: Y Motor: Unshifted Position: 5892429
17-02-28 20:03:46.541 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:03:46.541 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:03:46.541 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:03:46.541 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:03:46.541 -08 000000077 INF: ===================Camera #0 Frame #5===================
17-02-28 20:03:46.541 -08 000000062 INF: ===================Camera #2 Frame #5===================
17-02-28 20:03:46.570 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:46.647 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:46.695 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:46.706 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:03:46.706 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:03:46.706 -08 000000077 INF: ===================Camera #0 Frame #11===================
17-02-28 20:03:46.707 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:03:46.707 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:03:46.707 -08 000000062 INF: ===================Camera #2 Frame #11===================
17-02-28 20:03:46.709 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:46.835 -08 000000068 INF: Y Motor: Unshifted Position: 5690066
17-02-28 20:03:46.874 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:03:46.874 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:03:46.874 -08 000000077 INF: ===================Camera #0 Frame #17===================
17-02-28 20:03:46.876 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:03:46.876 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:03:46.876 -08 000000062 INF: ===================Camera #2 Frame #17===================
17-02-28 20:03:46.885 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:46.959 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:47.009 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.020 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:47.042 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:03:47.042 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:03:47.042 -08 000000077 INF: ===================Camera #0 Frame #23===================
17-02-28 20:03:47.045 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:03:47.045 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:03:47.045 -08 000000062 INF: ===================Camera #2 Frame #23===================
17-02-28 20:03:47.146 -08 000000068 INF: Y Motor: Unshifted Position: 5486408
17-02-28 20:03:47.196 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.210 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:03:47.210 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:03:47.210 -08 000000077 INF: ===================Camera #0 Frame #29===================
17-02-28 20:03:47.214 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:03:47.214 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:03:47.214 -08 000000062 INF: ===================Camera #2 Frame #29===================
17-02-28 20:03:47.270 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:47.321 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.332 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:47.378 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:03:47.378 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:03:47.378 -08 000000077 INF: ===================Camera #0 Frame #35===================
17-02-28 20:03:47.383 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:03:47.383 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:03:47.383 -08 000000062 INF: ===================Camera #2 Frame #36===================
17-02-28 20:03:47.456 -08 000000068 INF: Y Motor: Unshifted Position: 5284900
17-02-28 20:03:47.506 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.546 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:03:47.546 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:03:47.546 -08 000000077 INF: ===================Camera #0 Frame #42===================
17-02-28 20:03:47.556 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:03:47.556 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:03:47.556 -08 000000062 INF: ===================Camera #2 Frame #42===================
17-02-28 20:03:47.582 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:47.632 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.642 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:47.718 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:03:47.718 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:03:47.718 -08 000000077 INF: ===================Camera #0 Frame #48===================
17-02-28 20:03:47.725 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:03:47.725 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:03:47.725 -08 000000062 INF: ===================Camera #2 Frame #48===================
17-02-28 20:03:47.768 -08 000000068 INF: Y Motor: Unshifted Position: 5080147
17-02-28 20:03:47.818 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.887 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:03:47.887 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:03:47.887 -08 000000077 INF: ===================Camera #0 Frame #54===================
17-02-28 20:03:47.892 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:47.894 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:03:47.894 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:03:47.894 -08 000000062 INF: ===================Camera #2 Frame #54===================
17-02-28 20:03:47.945 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:47.956 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:48.056 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:03:48.056 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:03:48.056 -08 000000077 INF: ===================Camera #0 Frame #60===================
17-02-28 20:03:48.063 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:03:48.063 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:03:48.063 -08 000000062 INF: ===================Camera #2 Frame #61===================
17-02-28 20:03:48.082 -08 000000068 INF: Y Motor: Unshifted Position: 4878429
17-02-28 20:03:48.132 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:48.206 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:48.225 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:03:48.225 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:03:48.225 -08 000000077 INF: ===================Camera #0 Frame #67===================
17-02-28 20:03:48.235 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:03:48.235 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:03:48.235 -08 000000062 INF: ===================Camera #2 Frame #67===================
17-02-28 20:03:48.257 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:48.266 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:48.392 -08 000000068 INF: Y Motor: Unshifted Position: 4674337
17-02-28 20:03:48.397 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:03:48.397 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:03:48.397 -08 000000077 INF: ===================Camera #0 Frame #73===================
17-02-28 20:03:48.404 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:03:48.404 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:03:48.404 -08 000000062 INF: ===================Camera #2 Frame #73===================
17-02-28 20:03:48.442 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:48.516 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:48.565 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:03:48.565 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:03:48.565 -08 000000077 INF: ===================Camera #0 Frame #79===================
17-02-28 20:03:48.569 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:48.573 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:03:48.573 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:03:48.573 -08 000000062 INF: ===================Camera #2 Frame #79===================
17-02-28 20:03:48.580 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:48.704 -08 000000068 INF: Y Motor: Unshifted Position: 4472608
17-02-28 20:03:48.734 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:03:48.734 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:03:48.734 -08 000000077 INF: ===================Camera #0 Frame #85===================
17-02-28 20:03:48.742 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:03:48.742 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:03:48.742 -08 000000062 INF: ===================Camera #2 Frame #86===================
17-02-28 20:03:48.754 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:48.830 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:48.879 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:48.890 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:48.902 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:03:48.902 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:03:48.902 -08 000000077 INF: ===================Camera #0 Frame #92===================
17-02-28 20:03:48.915 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:03:48.915 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:03:48.915 -08 000000062 INF: ===================Camera #2 Frame #92===================
17-02-28 20:03:49.018 -08 000000068 INF: Y Motor: Unshifted Position: 4269159
17-02-28 20:03:49.068 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:49.074 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:03:49.074 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:03:49.074 -08 000000077 INF: ===================Camera #0 Frame #98===================
17-02-28 20:03:49.085 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:03:49.085 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:03:49.085 -08 000000062 INF: ===================Camera #2 Frame #98===================
17-02-28 20:03:49.140 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:49.191 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:49.202 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:49.244 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:03:49.244 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:03:49.244 -08 000000077 INF: ===================Camera #0 Frame #104===================
17-02-28 20:03:49.256 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:03:49.256 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:03:49.256 -08 000000062 INF: ===================Camera #2 Frame #105===================
17-02-28 20:03:49.328 -08 000000068 INF: Y Motor: Unshifted Position: 4067432
17-02-28 20:03:49.378 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:49.413 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:03:49.413 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:03:49.413 -08 000000077 INF: ===================Camera #0 Frame #110===================
17-02-28 20:03:49.429 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:03:49.429 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:03:49.429 -08 000000062 INF: ===================Camera #2 Frame #111===================
17-02-28 20:03:49.452 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:49.503 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:49.514 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:49.583 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:03:49.583 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:03:49.583 -08 000000077 INF: ===================Camera #0 Frame #117===================
17-02-28 20:03:49.599 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:03:49.599 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:03:49.599 -08 000000062 INF: ===================Camera #2 Frame #117===================
17-02-28 20:03:49.642 -08 000000068 INF: Y Motor: Unshifted Position: 3863119
17-02-28 20:03:49.692 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:49.756 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:03:49.756 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:03:49.756 -08 000000077 INF: ===================Camera #0 Frame #123===================
17-02-28 20:03:49.764 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:49.769 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:03:49.769 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:03:49.769 -08 000000062 INF: ===================Camera #2 Frame #123===================
17-02-28 20:03:49.815 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:49.829 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:49.925 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:03:49.925 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:03:49.925 -08 000000077 INF: ===================Camera #0 Frame #129===================
17-02-28 20:03:49.939 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:03:49.939 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:03:49.939 -08 000000062 INF: ===================Camera #2 Frame #130===================
17-02-28 20:03:49.954 -08 000000068 INF: Y Motor: Unshifted Position: 3660964
17-02-28 20:03:50.004 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.079 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:50.094 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:03:50.094 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:03:50.094 -08 000000077 INF: ===================Camera #0 Frame #135===================
17-02-28 20:03:50.111 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:03:50.111 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:03:50.111 -08 000000062 INF: ===================Camera #2 Frame #136===================
17-02-28 20:03:50.130 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.138 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:50.264 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:03:50.264 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:03:50.264 -08 000000077 INF: ===================Camera #0 Frame #142===================
17-02-28 20:03:50.266 -08 000000068 INF: Y Motor: Unshifted Position: 3456653
17-02-28 20:03:50.282 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:03:50.282 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:03:50.282 -08 000000062 INF: ===================Camera #2 Frame #142===================
17-02-28 20:03:50.316 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.388 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:50.437 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:03:50.437 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:03:50.437 -08 000000077 INF: ===================Camera #0 Frame #148===================
17-02-28 20:03:50.440 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.452 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:50.452 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:03:50.452 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:03:50.452 -08 000000062 INF: ===================Camera #2 Frame #149===================
17-02-28 20:03:50.577 -08 000000068 INF: Y Motor: Unshifted Position: 3255157
17-02-28 20:03:50.606 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:03:50.606 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:03:50.606 -08 000000077 INF: ===================Camera #0 Frame #154===================
17-02-28 20:03:50.625 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:03:50.625 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:03:50.625 -08 000000062 INF: ===================Camera #2 Frame #155===================
17-02-28 20:03:50.627 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.702 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:50.751 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.762 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:50.776 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:03:50.776 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:03:50.776 -08 000000077 INF: ===================Camera #0 Frame #161===================
17-02-28 20:03:50.795 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:03:50.795 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:03:50.795 -08 000000062 INF: ===================Camera #2 Frame #161===================
17-02-28 20:03:50.889 -08 000000068 INF: Y Motor: Unshifted Position: 3050840
17-02-28 20:03:50.939 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:50.949 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:03:50.949 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:03:50.949 -08 000000077 INF: ===================Camera #0 Frame #167===================
17-02-28 20:03:50.965 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:03:50.965 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:03:50.965 -08 000000062 INF: ===================Camera #2 Frame #167===================
17-02-28 20:03:51.012 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:51.065 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:51.076 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:51.119 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:03:51.119 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:03:51.119 -08 000000077 INF: ===================Camera #0 Frame #173===================
17-02-28 20:03:51.135 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:03:51.135 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:03:51.135 -08 000000062 INF: ===================Camera #2 Frame #174===================
17-02-28 20:03:51.200 -08 000000068 INF: Y Motor: Unshifted Position: 2849996
17-02-28 20:03:51.250 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:51.289 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:03:51.289 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:03:51.289 -08 000000077 INF: ===================Camera #0 Frame #179===================
17-02-28 20:03:51.308 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:03:51.308 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:03:51.308 -08 000000062 INF: ===================Camera #2 Frame #180===================
17-02-28 20:03:51.326 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:51.376 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:51.387 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:51.459 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:03:51.459 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:03:51.459 -08 000000077 INF: ===================Camera #0 Frame #186===================
17-02-28 20:03:51.478 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:03:51.478 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:03:51.478 -08 000000062 INF: ===================Camera #2 Frame #186===================
17-02-28 20:03:51.512 -08 000000068 INF: Y Motor: Unshifted Position: 2646333
17-02-28 20:03:51.562 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:51.632 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:03:51.632 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:03:51.632 -08 000000077 INF: ===================Camera #0 Frame #192===================
17-02-28 20:03:51.637 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:51.648 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:03:51.648 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:03:51.648 -08 000000062 INF: ===================Camera #2 Frame #193===================
17-02-28 20:03:51.720 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:51.722 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:51.802 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:03:51.802 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:03:51.802 -08 000000077 INF: ===================Camera #0 Frame #198===================
17-02-28 20:03:51.842 -08 000000068 INF: Y Motor: Unshifted Position: 2433785
17-02-28 20:03:51.889 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:03:51.889 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:03:51.889 -08 000000062 INF: ===================Camera #2 Frame #202===================
17-02-28 20:03:51.892 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:51.972 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:51.973 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:03:51.973 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:03:51.973 -08 000000077 INF: ===================Camera #0 Frame #205===================
17-02-28 20:03:52.016 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.027 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:52.070 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:03:52.070 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:03:52.070 -08 000000062 INF: ===================Camera #2 Frame #208===================
17-02-28 20:03:52.146 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:03:52.146 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:03:52.146 -08 000000077 INF: ===================Camera #0 Frame #211===================
17-02-28 20:03:52.155 -08 000000068 INF: Y Motor: Unshifted Position: 2231417
17-02-28 20:03:52.205 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.241 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:03:52.241 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:03:52.241 -08 000000062 INF: ===================Camera #2 Frame #214===================
17-02-28 20:03:52.277 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:52.316 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:03:52.316 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:03:52.316 -08 000000077 INF: ===================Camera #0 Frame #217===================
17-02-28 20:03:52.326 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.340 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:52.413 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:03:52.413 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:03:52.413 -08 000000062 INF: ===================Camera #2 Frame #221===================
17-02-28 20:03:52.464 -08 000000068 INF: Y Motor: Unshifted Position: 2027317
17-02-28 20:03:52.486 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:03:52.486 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:03:52.486 -08 000000077 INF: ===================Camera #0 Frame #223===================
17-02-28 20:03:52.514 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.585 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:03:52.585 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:03:52.585 -08 000000062 INF: ===================Camera #2 Frame #227===================
17-02-28 20:03:52.590 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:52.640 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.650 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:52.656 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:03:52.656 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:03:52.656 -08 000000077 INF: ===================Camera #0 Frame #230===================
17-02-28 20:03:52.756 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:03:52.756 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:03:52.756 -08 000000062 INF: ===================Camera #2 Frame #233===================
17-02-28 20:03:52.778 -08 000000068 INF: Y Motor: Unshifted Position: 1824946
17-02-28 20:03:52.828 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.829 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:03:52.829 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:03:52.829 -08 000000077 INF: ===================Camera #0 Frame #236===================
17-02-28 20:03:52.900 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:52.927 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:03:52.927 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:03:52.927 -08 000000062 INF: ===================Camera #2 Frame #240===================
17-02-28 20:03:52.952 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:52.964 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:52.999 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:03:52.999 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:03:52.999 -08 000000077 INF: ===================Camera #0 Frame #242===================
17-02-28 20:03:53.088 -08 000000068 INF: Y Motor: Unshifted Position: 1622802
17-02-28 20:03:53.101 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:03:53.101 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:03:53.101 -08 000000062 INF: ===================Camera #2 Frame #246===================
17-02-28 20:03:53.138 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:53.169 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:03:53.169 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:03:53.169 -08 000000077 INF: ===================Camera #0 Frame #249===================
17-02-28 20:03:53.214 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:53.264 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:53.272 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:03:53.272 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:03:53.272 -08 000000062 INF: ===================Camera #2 Frame #252===================
17-02-28 20:03:53.275 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:03:53.275 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:53.275 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:53.276 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:03:53.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:03:53.342 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:03:53.342 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:03:53.342 -08 000000077 INF: ===================Camera #0 Frame #255===================
17-02-28 20:03:53.400 -08 000000068 INF: Y Motor: Unshifted Position: 1419127
17-02-28 20:03:53.442 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:03:53.442 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:03:53.442 -08 000000062 INF: ===================Camera #2 Frame #259===================
17-02-28 20:03:53.450 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:53.512 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:03:53.512 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:03:53.512 -08 000000077 INF: ===================Camera #0 Frame #261===================
17-02-28 20:03:53.574 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:53.616 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:03:53.616 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:03:53.616 -08 000000062 INF: ===================Camera #2 Frame #265===================
17-02-28 20:03:53.682 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:03:53.682 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:03:53.682 -08 000000077 INF: ===================Camera #0 Frame #268===================
17-02-28 20:03:53.713 -08 000000068 INF: Y Motor: Unshifted Position: 1215459
17-02-28 20:03:53.763 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:53.787 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:03:53.787 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:03:53.787 -08 000000062 INF: ===================Camera #2 Frame #271===================
17-02-28 20:03:53.835 -08 000000055 INF: FPGA: Recv TDIYWAIT
17-02-28 20:03:53.835 -08 000000030 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:03:53.837 -08 000000030 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:03:53.838 -08 000000025 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:03:53.838 -08 000000100 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:03:53.838 -08 000000025 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:03:53.838 -08 000000025 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:03:53.838 -08 000000025 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:03:53.838 -08 000000100 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:03:53.838 -08 000000025 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:03:53.838 -08 000000100 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:03:53.838 -08 000000100 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:03:53.839 -08 000000100 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:03:53.855 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:03:53.855 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:03:53.855 -08 000000077 INF: ===================Camera #0 Frame #272===================
17-02-28 20:03:53.868 -08 000000077 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:03:53.869 -08 000000077 INF: ===================CameraTDI Cleanup===================
17-02-28 20:03:53.887 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:54.027 -08 000000068 INF: Y Motor: Unshifted Position: 1013963
17-02-28 20:03:54.031 -08 000000077 INF: Camera #0 ReleaseBuffer
17-02-28 20:03:54.031 -08 000000062 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:03:54.031 -08 000000062 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:03:54.031 -08 000000062 INF: ===================Camera #2 Frame #272===================
17-02-28 20:03:54.031 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:03:54.034 -08 000000062 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:03:54.035 -08 000000062 INF: ===================CameraTDI Cleanup===================
17-02-28 20:03:54.064 -08 000000077 INF: ======================================
17-02-28 20:03:54.077 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:54.211 -08 000000081 INF: FPGA: Recv EX1MV
17-02-28 20:03:54.211 -08 000000081 INF: FPGA: Recv EX2MV
17-02-28 20:03:54.211 -08 000000100 INF: Excitation Filter 2: Moved 107 steps in 372.6487 ms
17-02-28 20:03:54.211 -08 000000100 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.7898 ms
17-02-28 20:03:54.211 -08 000000100 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.8632 ms
17-02-28 20:03:54.211 -08 000000025 INF: Excitation Filter 1: Moved 107 steps in 372.9012 ms
17-02-28 20:03:54.211 -08 000000025 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.1433 ms
17-02-28 20:03:54.211 -08 000000025 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.2205 ms
17-02-28 20:03:54.211 -08 000000100 INF: ======================================
17-02-28 20:03:54.212 -08 000000025 INF: ======================================
17-02-28 20:03:54.213 -08 000000068 INF: Y Motor: Unshifted Position: 990752
17-02-28 20:03:54.213 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:03:54.213 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:54.213 -08 000000030 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:03:54.214 -08 000000030 INF: ======================================
17-02-28 20:03:54.235 -08 000000062 INF: Camera #2 ReleaseBuffer
17-02-28 20:03:54.235 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:03:54.271 -08 000000062 INF: ======================================
17-02-28 20:03:54.272 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:03:54.273 -08 000000090 INF: ======================================
17-02-28 20:03:54.275 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:03:54.275 -08 000000068 INF: Y Motor: Moved to 14.9075 after 7878 ms
17-02-28 20:03:54.275 -08 000000068 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:03:54.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:54.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:03:54.337 -08 000000068 INF: Y Motor: Recv v 4097\r
17-02-28 20:03:54.337 -08 000000068 INF: Y Motor: Status After move finished OK:
17-02-28 20:03:54.337 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:54.399 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:03:54.399 -08 000000068 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:54.399 -08 000000068 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:03:54.461 -08 000000068 INF: Y Motor: Recv v 134217728\r
17-02-28 20:03:54.461 -08 000000068 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:03:54.461 -08 000000068 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:03:54.461 -08 000000068 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:03:54.523 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:03:54.523 -08 000000068 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:03:54.523 -08 000000068 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:03:54.523 -08 000000068 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:54.587 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:03:54.587 -08 000000068 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:03:54.587 -08 000000068 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:54.651 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:03:54.651 -08 000000068 INF: ======================================
17-02-28 20:03:54.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:54.653 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:54.654 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:54.654 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:03:54.710 -08 000000092 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:03:54.711 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:03:54.770 -08 000000094 INF: FPGA: Recv TDIYERD 1490753
17-02-28 20:03:54.770 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:03:54.835 -08 000000102 INF: FPGA: Recv ZADCR 33551
17-02-28 20:03:54.835 -08 000000042 INF: At scan end Y pos = 14.908 and Z pos = -0.128. Y moved -48.539 mm
17-02-28 20:03:54.835 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:03:54.897 -08 000000025 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:03:54.897 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:03:54.897 -08 000000042 INF: TDIScan finished after 11966.8377 ms
17-02-28 20:03:54.897 -08 000000042 INF: Image[0]: Y should trigger at 63.447 mm, 2nd row was at 64.356 mm (error = 0.909 mm)
17-02-28 20:03:54.897 -08 000000042 INF: Image[2]: Y should trigger at 63.447 mm, 2nd row was at 64.356 mm (error = 0.909 mm)
17-02-28 20:03:54.899 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:54.931 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.608 um
17-02-28 20:03:54.932 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:54.933 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:03:54.961 -08 000000051 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:03:54.962 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:54.963 -08 000000034 INF: ===================Dither Clean Up Command===================
17-02-28 20:03:54.963 -08 000000040 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:03:54.963 -08 000000099 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:03:54.963 -08 000000080 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:03:54.963 -08 000000080 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:03:54.963 -08 000000040 INF: ======================================
17-02-28 20:03:54.963 -08 000000080 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:03:54.964 -08 000000099 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:03:54.964 -08 000000099 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:03:54.964 -08 000000092 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:03:54.964 -08 000000098 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:03:54.964 -08 000000098 INF: ======================================
17-02-28 20:03:54.965 -08 000000092 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:03:55.021 -08 000000087 INF: FPGA: Recv ZSTEP 
17-02-28 20:03:55.021 -08 000000087 INF: FPGA: Recv ZSEL 
17-02-28 20:03:55.021 -08 000000092 INF: FPGA: Xmit ZDACW 39420\n
17-02-28 20:03:55.021 -08 000000080 INF: ======================================
17-02-28 20:03:55.023 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:03:55.023 -08 000000099 INF: ======================================
17-02-28 20:03:55.085 -08 000000078 INF: FPGA: Recv ZDACW 
17-02-28 20:03:55.086 -08 000000092 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:03:55.086 -08 000000092 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:03:55.145 -08 000000033 INF: FPGA: Recv TDIBB
17-02-28 20:03:55.145 -08 000000092 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:03:55.146 -08 000000092 INF: ======================================
17-02-28 20:03:55.147 -08 000000034 INF: ======================================
17-02-28 20:03:55.148 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.149 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:03:55.149 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:03:55.151 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:03:55.151 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:03:55.152 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:03:55.152 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:03:55.152 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:03:55.174 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:03:55.175 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:03:55.175 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:03:55.175 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.175 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:03:55.175 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:03:55.176 -08 000000042 INF: Transformed XStagePosition from 72.50464 mm to 72.4818686712533 mm.
17-02-28 20:03:55.220 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5555043554641 mm.
17-02-28 20:03:55.220 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3555043554641 mm.
17-02-28 20:03:55.220 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4462543554641 mm.
17-02-28 20:03:55.222 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.223 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:03:55.223 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:55.223 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -150.4 um, section = B_1
17-02-28 20:03:55.224 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:03:55.225 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:03:55.228 -08 000000055 INF: ===================MoveEmissionFilters===================
17-02-28 20:03:55.242 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:03:55.243 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:03:55.246 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:03:55.247 -08 000000085 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:03:55.247 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1102 Request: {"Cycle":2,"Lane":2,"Tile":1102,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF234","HCSMMF257","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.247 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:03:55.248 -08 000000078 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:03:55.248 -08 000000085 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:03:55.248 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:03:55.249 -08 000000068 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:03:55.249 -08 000000065 INF: ===================Move X,Y===================
17-02-28 20:03:55.250 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:03:55.250 -08 000000068 INF: ======================================
17-02-28 20:03:55.250 -08 000000065 INF: ===================Move X,Y, Parallel===================
17-02-28 20:03:55.251 -08 000000067 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:03:55.251 -08 000000070 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:03:55.252 -08 000000068 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:03:55.252 -08 000000067 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:03:55.252 -08 000000070 INF: ======================================
17-02-28 20:03:55.252 -08 000000068 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:03:55.252 -08 000000068 INF: ======================================
17-02-28 20:03:55.254 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:03:55.254 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:03:55.254 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:03:55.254 -08 000000068 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:03:55.255 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:03:55.255 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:55.255 -08 000000068 INF: ======================================
17-02-28 20:03:55.255 -08 000000087 INF: ======================================
17-02-28 20:03:55.255 -08 000000102 INF: ===================Move X Motor without settling===================
17-02-28 20:03:55.255 -08 000000093 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:03:55.256 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:03:55.256 -08 000000102 INF: X Motor: Xmit PR VM\n
17-02-28 20:03:55.256 -08 000000070 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:03:55.256 -08 000000070 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:03:55.256 -08 000000044 INF: ===================Move Y Motor without settling===================
17-02-28 20:03:55.257 -08 000000084 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:03:55.257 -08 000000093 INF: ======================================
17-02-28 20:03:55.257 -08 000000085 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:03:55.257 -08 000000070 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:03:55.257 -08 000000087 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:03:55.257 -08 000000044 INF: Y Motor: Moving to 64.5555 mm @25.000 mm/sec, started at 14.9075 mm
17-02-28 20:03:55.257 -08 000000087 INF: ======================================
17-02-28 20:03:55.257 -08 000000044 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:03:55.257 -08 000000068 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:03:55.257 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:55.258 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:03:55.258 -08 000000068 INF: ======================================
17-02-28 20:03:55.258 -08 000000085 INF: ======================================
17-02-28 20:03:55.258 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:03:55.260 -08 000000084 INF: ======================================
17-02-28 20:03:55.261 -08 000000067 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:03:55.262 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:03:55.262 -08 000000067 INF: ======================================
17-02-28 20:03:55.263 -08 000000073 INF: ======================================
17-02-28 20:03:55.264 -08 000000055 INF: ======================================
17-02-28 20:03:55.273 -08 000000029 INF: FPGA: Recv ZSEL 
17-02-28 20:03:55.274 -08 000000070 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:03:55.275 -08 000000070 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:03:55.283 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:55.283 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:03:55.335 -08 000000029 INF: FPGA: Recv TDIBB
17-02-28 20:03:55.335 -08 000000070 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:03:55.337 -08 000000102 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:03:55.337 -08 000000102 INF: X Motor: Xmit PR VI\n
17-02-28 20:03:55.337 -08 000000070 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:03:55.337 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:55.339 -08 000000070 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:03:55.339 -08 000000070 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:03:55.339 -08 000000070 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:03:55.340 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:03:55.340 -08 000000044 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:03:55.340 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:55.357 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1108 Request: {"Cycle":2,"Lane":2,"Tile":1108,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF264","HCSMMF282","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.372 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1107 Request: {"Cycle":2,"Lane":2,"Tile":1107,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF275","HCSMMF212","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.374 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1103 Request: {"Cycle":2,"Lane":2,"Tile":1103,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF254","HCSMMF199","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.374 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1106 Request: {"Cycle":2,"Lane":2,"Tile":1106,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF202","HCSMMF183","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.375 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1113 Request: {"Cycle":2,"Lane":2,"Tile":1113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF238","HCSMMF250","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.376 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1109 Request: {"Cycle":2,"Lane":2,"Tile":1109,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF208","HCSMMF197","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.378 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1112 Request: {"Cycle":2,"Lane":2,"Tile":1112,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF278","HCSMMF283","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.379 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1101 Request: {"Cycle":2,"Lane":2,"Tile":1101,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF243","HCSMMF178","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.379 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1114 Request: {"Cycle":2,"Lane":2,"Tile":1114,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF220","HCSMMF248","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.380 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1110 Request: {"Cycle":2,"Lane":2,"Tile":1110,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF276","HCSMMF285","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.381 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1105 Request: {"Cycle":2,"Lane":2,"Tile":1105,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF265","HCSMMF211","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.382 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1104 Request: {"Cycle":2,"Lane":2,"Tile":1104,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF190","HCSMMF196","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.383 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1115 Request: {"Cycle":2,"Lane":2,"Tile":1115,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF259","HCSMMF206","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.383 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1111 Request: {"Cycle":2,"Lane":2,"Tile":1111,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF218","HCSMMF252","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.384 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1117 Request: {"Cycle":2,"Lane":2,"Tile":1117,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF267","HCSMMF233","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.385 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1118 Request: {"Cycle":2,"Lane":2,"Tile":1118,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF270","HCSMMF232","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.385 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1119 Request: {"Cycle":2,"Lane":2,"Tile":1119,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF239","HCSMMF200","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.386 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1121 Request: {"Cycle":2,"Lane":2,"Tile":1121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF205","HCSMMF235","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.387 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1116 Request: {"Cycle":2,"Lane":2,"Tile":1116,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF207","HCSMMF244","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.388 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1120 Request: {"Cycle":2,"Lane":2,"Tile":1120,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF279","HCSMMF213","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.390 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1124 Request: {"Cycle":2,"Lane":2,"Tile":1124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF186","HCSMMF249","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.391 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1125 Request: {"Cycle":2,"Lane":2,"Tile":1125,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF222","HCSMMF193","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.392 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1128 Request: {"Cycle":2,"Lane":2,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF180","HCSMMF228","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.393 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1126 Request: {"Cycle":2,"Lane":2,"Tile":1126,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF281","HCSMMF195","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.394 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1127 Request: {"Cycle":2,"Lane":2,"Tile":1127,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF203","HCSMMF188","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.394 -08 000000092 INF: FPGA: Recv ZSTEP 
17-02-28 20:03:55.394 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:55.395 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1122 Request: {"Cycle":2,"Lane":2,"Tile":1122,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF221","HCSMMF277","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.396 -08 000000102 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:03:55.396 -08 000000102 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:03:55.396 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:03:55.396 -08 000000102 INF: X Motor: Moving to 72.4819 mm @15.000 mm/sec, started at 71.3804 mm
17-02-28 20:03:55.396 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1123 Request: {"Cycle":2,"Lane":2,"Tile":1123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF245","HCSMMF261","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:03:55.396 -08 000000102 INF: X Motor: Xmit MA 5522\n
17-02-28 20:03:55.396 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:55.396 -08 000000070 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:03:55.396 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:55.398 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.398 -08 000000070 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:03:55.398 -08 000000070 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:03:55.398 -08 000000070 INF: Z Motor: Arming to move to -0.1104 mm
17-02-28 20:03:55.398 -08 000000070 INF: FPGA: Xmit ZYT 6435550 4\n
17-02-28 20:03:55.404 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:03:55.459 -08 000000085 INF: FPGA: Recv ZYT 
17-02-28 20:03:55.459 -08 000000070 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490752 enc / 14.908 mm / ) = 6435550 enc / 64.356 mm
17-02-28 20:03:55.459 -08 000000070 INF: FPGA: Xmit ZARM 28934\n
17-02-28 20:03:55.461 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:03:55.461 -08 000000044 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:55.461 -08 000000102 INF: X Motor: Recv MA 5522\r\n>
17-02-28 20:03:55.461 -08 000000102 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:03:55.461 -08 000000044 INF: Y Motor: Set target position to 5955550 encoder counts
17-02-28 20:03:55.461 -08 000000044 INF: Y Motor: Xmit s r0xca 5955550\r
17-02-28 20:03:55.500 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.500 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:03:55.520 -08 000000092 INF: FPGA: Recv ZARM
17-02-28 20:03:55.520 -08 000000070 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.7627 ms
17-02-28 20:03:55.520 -08 000000070 INF: Z Motor: ArmAbsStepped took 121.4482 ms
17-02-28 20:03:55.520 -08 000000070 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:03:55.521 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:03:55.521 -08 000000044 INF: Y Motor: Start the move command
17-02-28 20:03:55.521 -08 000000044 INF: Y Motor: Xmit t 1\r
17-02-28 20:03:55.521 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:03:55.523 -08 000000070 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:03:55.523 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:03:55.525 -08 000000070 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:03:55.525 -08 000000070 INF: ===================TDI Scan Setup===================
17-02-28 20:03:55.526 -08 000000070 INF: ======================================
17-02-28 20:03:55.537 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.543 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:03:55.583 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:03:55.583 -08 000000044 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:03:55.583 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:55.644 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.651 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:03:55.710 -08 000000044 INF: Y Motor: Unshifted Position: 1076102
17-02-28 20:03:55.743 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.749 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:03:55.760 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:55.846 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:03:55.851 -08 000000045 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:03:55.851 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:03:55.851 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:03:55.866 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:03:55.868 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:03:55.884 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.020 -08 000000044 INF: Y Motor: Unshifted Position: 1779914
17-02-28 20:03:56.098 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.098 -08 000000083 INF: RunCopyService queue size at 2/28/2017 8:03:56 PM is 2
17-02-28 20:03:56.103 -08 000000102 INF: X Motor: Xmit PR ER\n
17-02-28 20:03:56.163 -08 000000102 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:03:56.163 -08 000000102 INF: X Motor: Moved to 72.4814 after 701 ms
17-02-28 20:03:56.164 -08 000000102 INF: ======================================
17-02-28 20:03:56.167 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:03:56.213 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:56.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:03:56.349 -08 000000044 INF: Y Motor: Unshifted Position: 2600783
17-02-28 20:03:56.399 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.466 -08 000000045 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:03:56.466 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:03:56.466 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:03:56.481 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:03:56.483 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:03:56.484 -08 000000045 INF: ======================================
17-02-28 20:03:56.485 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:03:56.486 -08 000000078 INF: ======================================
17-02-28 20:03:56.528 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.663 -08 000000044 INF: Y Motor: Unshifted Position: 3379044
17-02-28 20:03:56.713 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.837 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:56.973 -08 000000044 INF: Y Motor: Unshifted Position: 4161587
17-02-28 20:03:57.023 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:57.150 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:57.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:57.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:03:57.288 -08 000000044 INF: Y Motor: Unshifted Position: 4944936
17-02-28 20:03:57.338 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:57.460 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:57.597 -08 000000044 INF: Y Motor: Unshifted Position: 5716971
17-02-28 20:03:57.647 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:57.774 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:57.910 -08 000000044 INF: Y Motor: Unshifted Position: 5955552
17-02-28 20:03:57.910 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:03:57.910 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:57.972 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:03:57.972 -08 000000044 INF: Y Motor: Moved to 64.5555 after 2388 ms
17-02-28 20:03:57.972 -08 000000044 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:03:58.036 -08 000000044 INF: Y Motor: Recv v 4096\r
17-02-28 20:03:58.036 -08 000000044 INF: Y Motor: Status After move finished OK:
17-02-28 20:03:58.036 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:58.098 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:03:58.098 -08 000000044 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:58.098 -08 000000044 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:03:58.158 -08 000000044 INF: Y Motor: Recv v 402653184\r
17-02-28 20:03:58.158 -08 000000044 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:03:58.158 -08 000000044 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:03:58.158 -08 000000044 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:03:58.223 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:03:58.223 -08 000000044 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:03:58.223 -08 000000044 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:03:58.223 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:58.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:58.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:58.277 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:03:58.278 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:03:58.285 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:03:58.285 -08 000000044 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:03:58.285 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:58.349 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:03:58.349 -08 000000044 INF: ======================================
17-02-28 20:03:58.350 -08 000000065 INF: ===================Move X,Y===================
17-02-28 20:03:58.351 -08 000000065 INF: ======================================
17-02-28 20:03:58.352 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:03:58.353 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:58.353 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:03:58.353 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:03:58.377 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:03:58.409 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:03:58.409 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:03:58.469 -08 000000067 INF: FPGA: Recv ZFREQCL
17-02-28 20:03:58.469 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:03:58.470 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF)
17-02-28 20:03:58.470 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:58.470 -08 000000018 INF: Current Position of Pump is: 18240
17-02-28 20:03:58.470 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:03:58.531 -08 000000100 INF: FPGA: Recv TDIYERD 6455551
17-02-28 20:03:58.531 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455551 counts (64.556 mm)
17-02-28 20:03:58.532 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:03:58.532 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:03:58.533 -08 000000080 INF: ===================TDI FPGA Arm===================
17-02-28 20:03:58.533 -08 000000058 INF: ===================Set YMotor gains for scans===================
17-02-28 20:03:58.533 -08 000000058 INF: ======================================
17-02-28 20:03:58.534 -08 000000080 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:03:58.534 -08 000000080 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:03:58.534 -08 000000080 INF: FPGA: Xmit TDIYPOS 6344625\n
17-02-28 20:03:58.570 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:03:58.593 -08 000000055 INF: FPGA: Recv TDIYPOS
17-02-28 20:03:58.593 -08 000000080 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:03:58.595 -08 000000080 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:03:58.595 -08 000000080 INF: FPGA: Xmit TDIYARM3 139264 6435550 1 1\n
17-02-28 20:03:58.658 -08 000000097 INF: FPGA: Recv TDIYARM3
17-02-28 20:03:58.658 -08 000000080 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:03:58.659 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF)
17-02-28 20:03:58.659 -08 000000018 INF: Current Position of Pump is: 18240
17-02-28 20:03:58.659 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:03:58.659 -08 000000080 INF: ===================TDI FPGA Arm===================
17-02-28 20:03:58.660 -08 000000080 INF: ======================================
17-02-28 20:03:58.661 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:03:58.662 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:03:58.662 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:58.663 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:58.663 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:58.664 -08 000000031 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:03:58.664 -08 000000065 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:03:58.664 -08 000000031 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:03:58.664 -08 000000031 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:03:58.664 -08 000000031 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:03:58.664 -08 000000065 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:03:58.664 -08 000000031 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:03:58.664 -08 000000065 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:03:58.664 -08 000000065 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:03:58.667 -08 000000065 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:03:58.759 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD18240R\r
17-02-28 20:03:58.845 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:58.945 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:58.969 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:59.031 -08 000000098 INF: FPGA: Recv EX2MV
17-02-28 20:03:59.031 -08 000000098 INF: FPGA: Recv EX1MV
17-02-28 20:03:59.031 -08 000000065 INF: Excitation Filter 1: Moved -107 steps in 366.4242 ms
17-02-28 20:03:59.031 -08 000000031 INF: Excitation Filter 2: Moved -107 steps in 366.6136 ms
17-02-28 20:03:59.031 -08 000000065 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.6208 ms
17-02-28 20:03:59.031 -08 000000065 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.7265 ms
17-02-28 20:03:59.031 -08 000000031 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.7515 ms
17-02-28 20:03:59.031 -08 000000031 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.9295 ms
17-02-28 20:03:59.031 -08 000000065 INF: ======================================
17-02-28 20:03:59.031 -08 000000031 INF: ======================================
17-02-28 20:03:59.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:59.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:03:59.035 -08 000000070 INF: ===================Camera TDI===================
17-02-28 20:03:59.035 -08 000000068 INF: ===================FPGA Z Wait===================
17-02-28 20:03:59.035 -08 000000030 INF: ===================Move Y Motor without settling===================
17-02-28 20:03:59.035 -08 000000030 INF: Y Motor: Moving to 14.9072 mm @6.500 mm/sec, started at 64.5555 mm
17-02-28 20:03:59.035 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:03:59.035 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:03:59.035 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:03:59.035 -08 000000070 INF: ===================Camera TDI, Parallel===================
17-02-28 20:03:59.036 -08 000000032 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:03:59.036 -08 000000068 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:03:59.036 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:03:59.036 -08 000000067 INF: ===================Camera TDI===================
17-02-28 20:03:59.037 -08 000000032 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:03:59.038 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:59.038 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:59.038 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:59.038 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:59.094 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:03:59.094 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:03:59.094 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:03:59.159 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:03:59.159 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:03:59.188 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:59.188 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:59.189 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:59.189 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:59.219 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:59.221 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:03:59.221 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:03:59.221 -08 000000030 INF: Y Motor: Set target position to 990717 encoder counts
17-02-28 20:03:59.221 -08 000000030 INF: Y Motor: Xmit s r0xca 990717\r
17-02-28 20:03:59.283 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:03:59.283 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:59.283 -08 000000030 INF: Y Motor: Start the move command
17-02-28 20:03:59.283 -08 000000030 INF: Y Motor: Xmit t 1\r
17-02-28 20:03:59.338 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:59.338 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:59.339 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:03:59.339 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:03:59.345 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:03:59.345 -08 000000030 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:03:59.345 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:59.406 -08 000000100 INF: FPGA: Recv ZWAIT 
17-02-28 20:03:59.406 -08 000000068 INF: ======================================
17-02-28 20:03:59.469 -08 000000030 INF: Y Motor: Unshifted Position: 5893692
17-02-28 20:03:59.488 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:03:59.488 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:03:59.488 -08 000000073 INF: ===================Camera #0 Frame #5===================
17-02-28 20:03:59.489 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:03:59.489 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:03:59.489 -08 000000067 INF: ===================Camera #2 Frame #5===================
17-02-28 20:03:59.519 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:59.533 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:59.593 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:59.644 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:59.653 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:03:59.653 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:03:59.653 -08 000000073 INF: ===================Camera #0 Frame #11===================
17-02-28 20:03:59.656 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:03:59.656 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:03:59.656 -08 000000067 INF: ===================Camera #2 Frame #11===================
17-02-28 20:03:59.783 -08 000000030 INF: Y Motor: Unshifted Position: 5691544
17-02-28 20:03:59.821 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:03:59.821 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:03:59.821 -08 000000073 INF: ===================Camera #0 Frame #17===================
17-02-28 20:03:59.829 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:03:59.829 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:03:59.829 -08 000000067 INF: ===================Camera #2 Frame #17===================
17-02-28 20:03:59.833 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:59.843 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:03:59.906 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:03:59.959 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:03:59.989 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:03:59.989 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:03:59.989 -08 000000073 INF: ===================Camera #0 Frame #23===================
17-02-28 20:04:00.001 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:00.001 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:00.001 -08 000000067 INF: ===================Camera #2 Frame #23===================
17-02-28 20:04:00.093 -08 000000030 INF: Y Motor: Unshifted Position: 5487240
17-02-28 20:04:00.143 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:00.156 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:00.157 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:04:00.157 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:04:00.157 -08 000000073 INF: ===================Camera #0 Frame #29===================
17-02-28 20:04:00.172 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:04:00.172 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:04:00.172 -08 000000067 INF: ===================Camera #2 Frame #30===================
17-02-28 20:04:00.216 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:00.267 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:00.325 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:04:00.325 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:04:00.325 -08 000000073 INF: ===================Camera #0 Frame #35===================
17-02-28 20:04:00.346 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:04:00.346 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:04:00.346 -08 000000067 INF: ===================Camera #2 Frame #36===================
17-02-28 20:04:00.406 -08 000000030 INF: Y Motor: Unshifted Position: 5284434
17-02-28 20:04:00.456 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:00.466 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:00.494 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:04:00.494 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:04:00.494 -08 000000073 INF: ===================Camera #0 Frame #42===================
17-02-28 20:04:00.518 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:04:00.518 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:04:00.518 -08 000000067 INF: ===================Camera #2 Frame #42===================
17-02-28 20:04:00.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:00.582 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:00.667 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:04:00.667 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:04:00.667 -08 000000073 INF: ===================Camera #0 Frame #48===================
17-02-28 20:04:00.688 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:04:00.688 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:04:00.688 -08 000000067 INF: ===================Camera #2 Frame #49===================
17-02-28 20:04:00.719 -08 000000030 INF: Y Motor: Unshifted Position: 5082710
17-02-28 20:04:00.769 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:00.781 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:00.837 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:04:00.837 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:04:00.837 -08 000000073 INF: ===================Camera #0 Frame #54===================
17-02-28 20:04:00.842 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:00.865 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:04:00.865 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:04:00.865 -08 000000067 INF: ===================Camera #2 Frame #55===================
17-02-28 20:04:00.893 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.007 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:04:01.007 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:04:01.007 -08 000000073 INF: ===================Camera #0 Frame #60===================
17-02-28 20:04:01.030 -08 000000030 INF: Y Motor: Unshifted Position: 4879264
17-02-28 20:04:01.037 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:04:01.037 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:04:01.037 -08 000000067 INF: ===================Camera #2 Frame #62===================
17-02-28 20:04:01.080 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.092 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:01.153 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:01.177 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:04:01.177 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:04:01.177 -08 000000073 INF: ===================Camera #0 Frame #67===================
17-02-28 20:04:01.204 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.213 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:04:01.213 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:04:01.213 -08 000000067 INF: ===================Camera #2 Frame #68===================
17-02-28 20:04:01.343 -08 000000030 INF: Y Motor: Unshifted Position: 4676896
17-02-28 20:04:01.350 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:04:01.350 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:04:01.350 -08 000000073 INF: ===================Camera #0 Frame #73===================
17-02-28 20:04:01.384 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:04:01.384 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:04:01.384 -08 000000067 INF: ===================Camera #2 Frame #74===================
17-02-28 20:04:01.393 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.403 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:01.468 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:01.468 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:04:01.468 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:04:01.518 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:04:01.518 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:04:01.518 -08 000000073 INF: ===================Camera #0 Frame #79===================
17-02-28 20:04:01.519 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.558 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:04:01.558 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:04:01.558 -08 000000067 INF: ===================Camera #2 Frame #81===================
17-02-28 20:04:01.653 -08 000000030 INF: Y Motor: Unshifted Position: 4471915
17-02-28 20:04:01.688 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:04:01.688 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:04:01.688 -08 000000073 INF: ===================Camera #0 Frame #86===================
17-02-28 20:04:01.703 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.735 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:04:01.735 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:04:01.735 -08 000000067 INF: ===================Camera #2 Frame #87===================
17-02-28 20:04:01.827 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:01.861 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:04:01.861 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:04:01.861 -08 000000073 INF: ===================Camera #0 Frame #92===================
17-02-28 20:04:01.905 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:04:01.905 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:04:01.905 -08 000000067 INF: ===================Camera #2 Frame #94===================
17-02-28 20:04:01.966 -08 000000030 INF: Y Motor: Unshifted Position: 4269771
17-02-28 20:04:02.016 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.031 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:04:02.031 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:04:02.031 -08 000000073 INF: ===================Camera #0 Frame #98===================
17-02-28 20:04:02.082 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:04:02.082 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:04:02.082 -08 000000067 INF: ===================Camera #2 Frame #100===================
17-02-28 20:04:02.140 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.201 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:04:02.201 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:04:02.201 -08 000000073 INF: ===================Camera #0 Frame #104===================
17-02-28 20:04:02.255 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:04:02.255 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:04:02.255 -08 000000067 INF: ===================Camera #2 Frame #106===================
17-02-28 20:04:02.279 -08 000000030 INF: Y Motor: Unshifted Position: 4068266
17-02-28 20:04:02.329 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.371 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:04:02.371 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:04:02.371 -08 000000073 INF: ===================Camera #0 Frame #111===================
17-02-28 20:04:02.429 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:04:02.429 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:04:02.429 -08 000000067 INF: ===================Camera #2 Frame #113===================
17-02-28 20:04:02.454 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.544 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:04:02.544 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:04:02.544 -08 000000073 INF: ===================Camera #0 Frame #117===================
17-02-28 20:04:02.568 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:04:02.589 -08 000000030 INF: Y Motor: Unshifted Position: 3864599
17-02-28 20:04:02.606 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:04:02.606 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:04:02.606 -08 000000067 INF: ===================Camera #2 Frame #119===================
17-02-28 20:04:02.639 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.650 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:02.714 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:04:02.714 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:04:02.714 -08 000000073 INF: ===================Camera #0 Frame #123===================
17-02-28 20:04:02.750 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:02.763 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.777 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:02.779 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:04:02.779 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:04:02.779 -08 000000067 INF: ===================Camera #2 Frame #126===================
17-02-28 20:04:02.883 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:04:02.883 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:04:02.883 -08 000000073 INF: ===================Camera #0 Frame #130===================
17-02-28 20:04:02.903 -08 000000030 INF: Y Motor: Unshifted Position: 3660930
17-02-28 20:04:02.953 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:02.956 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:04:02.956 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:04:02.956 -08 000000067 INF: ===================Camera #2 Frame #132===================
17-02-28 20:04:03.027 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:03.054 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:04:03.054 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:04:03.054 -08 000000073 INF: ===================Camera #0 Frame #136===================
17-02-28 20:04:03.076 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:03.087 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:03.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:03.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-02-28 20:04:03.127 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:04:03.127 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:04:03.127 -08 000000067 INF: ===================Camera #2 Frame #139===================
17-02-28 20:04:03.212 -08 000000030 INF: Y Motor: Unshifted Position: 3459438
17-02-28 20:04:03.222 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:04:03.222 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:04:03.222 -08 000000073 INF: ===================Camera #0 Frame #142===================
17-02-28 20:04:03.262 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:03.305 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:04:03.305 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:04:03.305 -08 000000067 INF: ===================Camera #2 Frame #145===================
17-02-28 20:04:03.389 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:03.392 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:04:03.392 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:04:03.392 -08 000000073 INF: ===================Camera #0 Frame #148===================
17-02-28 20:04:03.478 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:04:03.478 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:04:03.478 -08 000000067 INF: ===================Camera #2 Frame #151===================
17-02-28 20:04:03.527 -08 000000030 INF: Y Motor: Unshifted Position: 3255988
17-02-28 20:04:03.562 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:04:03.562 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:04:03.562 -08 000000073 INF: ===================Camera #0 Frame #155===================
17-02-28 20:04:03.577 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:03.651 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:04:03.651 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:04:03.651 -08 000000067 INF: ===================Camera #2 Frame #158===================
17-02-28 20:04:03.699 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:03.735 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:04:03.735 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:04:03.735 -08 000000073 INF: ===================Camera #0 Frame #161===================
17-02-28 20:04:03.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:03.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:03.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:03.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:04:03.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:04:03.777 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°, FC temperature to 55°===================
17-02-28 20:04:03.828 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:04:03.828 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:04:03.828 -08 000000067 INF: ===================Camera #2 Frame #164===================
17-02-28 20:04:03.838 -08 000000030 INF: Y Motor: Unshifted Position: 3051021
17-02-28 20:04:03.888 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:03.905 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:04:03.905 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:04:03.905 -08 000000073 INF: ===================Camera #0 Frame #167===================
17-02-28 20:04:04.002 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:04:04.002 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:04:04.002 -08 000000067 INF: ===================Camera #2 Frame #171===================
17-02-28 20:04:04.012 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.075 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:04:04.075 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:04:04.075 -08 000000073 INF: ===================Camera #0 Frame #173===================
17-02-28 20:04:04.145 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:04:04.145 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:04:04.146 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:04:04.147 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:04:04.147 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:04.147 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:04.148 -08 000000030 INF: Y Motor: Unshifted Position: 2850835
17-02-28 20:04:04.148 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:04.180 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:04:04.180 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:04:04.180 -08 000000067 INF: ===================Camera #2 Frame #177===================
17-02-28 20:04:04.187 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:04.198 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.245 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:04:04.245 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:04:04.245 -08 000000073 INF: ===================Camera #0 Frame #180===================
17-02-28 20:04:04.274 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:04.274 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Selecting Reagent HCM (7)===================
17-02-28 20:04:04.274 -08 000000018 INF: Valve A1: Go to position 7
17-02-28 20:04:04.274 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:04:04.325 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.336 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 8\r
17-02-28 20:04:04.336 -08 000000018 INF: Valve A1: 68.482 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:04:04.336 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 8 to 7
17-02-28 20:04:04.336 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC7\r
17-02-28 20:04:04.336 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:04:04.336 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:04:04.354 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184.
17-02-28 20:04:04.354 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184
17-02-28 20:04:04.354 -08 000000067 INF: ===================Camera #2 Frame #184===================
17-02-28 20:04:04.418 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:04:04.418 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:04:04.418 -08 000000073 INF: ===================Camera #0 Frame #186===================
17-02-28 20:04:04.461 -08 000000030 INF: Y Motor: Unshifted Position: 2647163
17-02-28 20:04:04.511 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.531 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:04:04.531 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:04:04.531 -08 000000067 INF: ===================Camera #2 Frame #190===================
17-02-28 20:04:04.585 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 7\r
17-02-28 20:04:04.585 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:04.585 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-02-28 20:04:04.588 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:04:04.588 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:04:04.588 -08 000000073 INF: ===================Camera #0 Frame #192===================
17-02-28 20:04:04.635 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.705 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 196, frameCount = 197.
17-02-28 20:04:04.705 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 197
17-02-28 20:04:04.705 -08 000000067 INF: ===================Camera #2 Frame #197===================
17-02-28 20:04:04.757 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:04:04.757 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:04:04.757 -08 000000073 INF: ===================Camera #0 Frame #199===================
17-02-28 20:04:04.774 -08 000000030 INF: Y Motor: Unshifted Position: 2443714
17-02-28 20:04:04.824 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.883 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 202, frameCount = 203.
17-02-28 20:04:04.883 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 203
17-02-28 20:04:04.883 -08 000000067 INF: ===================Camera #2 Frame #203===================
17-02-28 20:04:04.930 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:04:04.930 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:04:04.930 -08 000000073 INF: ===================Camera #0 Frame #205===================
17-02-28 20:04:04.948 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:04.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:04.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:04.957 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:05.021 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:05.029 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 7, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 62, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:04:05.058 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210.
17-02-28 20:04:05.058 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210
17-02-28 20:04:05.058 -08 000000067 INF: ===================Camera #2 Frame #210===================
17-02-28 20:04:05.084 -08 000000030 INF: Y Motor: Unshifted Position: 2242001
17-02-28 20:04:05.100 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:04:05.100 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:04:05.100 -08 000000073 INF: ===================Camera #0 Frame #211===================
17-02-28 20:04:05.121 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:04:05.134 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:05.210 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:04:05.210 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:04:05.235 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 215, frameCount = 216.
17-02-28 20:04:05.235 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 216
17-02-28 20:04:05.235 -08 000000067 INF: ===================Camera #2 Frame #216===================
17-02-28 20:04:05.261 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:05.269 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:04:05.269 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:04:05.269 -08 000000073 INF: ===================Camera #0 Frame #217===================
17-02-28 20:04:05.310 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:04:05.396 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:05.397 -08 000000030 INF: Y Motor: Unshifted Position: 2038334
17-02-28 20:04:05.408 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 221, frameCount = 222.
17-02-28 20:04:05.408 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 222
17-02-28 20:04:05.408 -08 000000067 INF: ===================Camera #2 Frame #222===================
17-02-28 20:04:05.439 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:04:05.439 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:04:05.439 -08 000000073 INF: ===================Camera #0 Frame #224===================
17-02-28 20:04:05.447 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:05.496 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:05.571 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:05.580 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 228, frameCount = 229.
17-02-28 20:04:05.580 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 229
17-02-28 20:04:05.580 -08 000000067 INF: ===================Camera #2 Frame #229===================
17-02-28 20:04:05.585 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:05.612 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:04:05.612 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:04:05.612 -08 000000073 INF: ===================Camera #0 Frame #230===================
17-02-28 20:04:05.710 -08 000000030 INF: Y Motor: Unshifted Position: 1836186
17-02-28 20:04:05.756 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 234, frameCount = 235.
17-02-28 20:04:05.756 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 235
17-02-28 20:04:05.756 -08 000000067 INF: ===================Camera #2 Frame #235===================
17-02-28 20:04:05.760 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:05.782 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:04:05.782 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:04:05.782 -08 000000073 INF: ===================Camera #0 Frame #236===================
17-02-28 20:04:05.835 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:05.885 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:05.896 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:05.930 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:04:05.930 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:04:05.930 -08 000000067 INF: ===================Camera #2 Frame #242===================
17-02-28 20:04:05.952 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:04:05.952 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:04:05.952 -08 000000073 INF: ===================Camera #0 Frame #243===================
17-02-28 20:04:05.996 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:04:06.021 -08 000000030 INF: Y Motor: Unshifted Position: 1632511
17-02-28 20:04:06.071 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:06.082 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:06.106 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:04:06.106 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:04:06.106 -08 000000067 INF: ===================Camera #2 Frame #248===================
17-02-28 20:04:06.125 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:04:06.125 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:04:06.125 -08 000000073 INF: ===================Camera #0 Frame #249===================
17-02-28 20:04:06.183 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:06.196 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:06.272 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:06.272 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-02-28 20:04:06.278 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 253, frameCount = 254.
17-02-28 20:04:06.278 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 254
17-02-28 20:04:06.278 -08 000000067 INF: ===================Camera #2 Frame #254===================
17-02-28 20:04:06.296 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:04:06.296 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:04:06.296 -08 000000073 INF: ===================Camera #0 Frame #255===================
17-02-28 20:04:06.333 -08 000000030 INF: Y Motor: Unshifted Position: 1429062
17-02-28 20:04:06.372 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP11904R\r
17-02-28 20:04:06.383 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:06.451 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:04:06.451 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:04:06.451 -08 000000067 INF: ===================Camera #2 Frame #261===================
17-02-28 20:04:06.459 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:06.466 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:04:06.466 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:04:06.466 -08 000000073 INF: ===================Camera #0 Frame #261===================
17-02-28 20:04:06.510 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:06.559 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:06.627 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:04:06.627 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:04:06.627 -08 000000067 INF: ===================Camera #2 Frame #267===================
17-02-28 20:04:06.635 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:04:06.635 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:04:06.635 -08 000000073 INF: ===================Camera #0 Frame #268===================
17-02-28 20:04:06.644 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:06.645 -08 000000030 INF: Y Motor: Unshifted Position: 1226679
17-02-28 20:04:06.695 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:06.770 -08 000000025 INF: FPGA: Recv TDIYWAIT
17-02-28 20:04:06.770 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:06.772 -08 000000032 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:04:06.773 -08 000000077 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:04:06.773 -08 000000097 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:04:06.773 -08 000000077 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:04:06.773 -08 000000077 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:04:06.773 -08 000000097 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:04:06.773 -08 000000097 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:04:06.773 -08 000000097 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:04:06.773 -08 000000077 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:04:06.773 -08 000000097 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:04:06.774 -08 000000077 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:04:06.800 -08 000000067 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:04:06.800 -08 000000067 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:04:06.800 -08 000000067 INF: ===================Camera #2 Frame #272===================
17-02-28 20:04:06.808 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:04:06.808 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:04:06.808 -08 000000073 INF: ===================Camera #0 Frame #272===================
17-02-28 20:04:06.818 -08 000000067 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:04:06.820 -08 000000067 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:06.821 -08 000000073 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:04:06.821 -08 000000073 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:06.822 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:06.894 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:06.958 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:06.959 -08 000000030 INF: Y Motor: Unshifted Position: 1023242
17-02-28 20:04:07.004 -08 000000067 INF: Camera #2 ReleaseBuffer
17-02-28 20:04:07.004 -08 000000067 INF: ===================Camera TDI===================
17-02-28 20:04:07.009 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:07.040 -08 000000067 INF: ======================================
17-02-28 20:04:07.136 -08 000000073 INF: Camera #0 ReleaseBuffer
17-02-28 20:04:07.136 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:04:07.143 -08 000000069 INF: FPGA: Recv EX2MV
17-02-28 20:04:07.143 -08 000000069 INF: FPGA: Recv EX1MV
17-02-28 20:04:07.143 -08 000000097 INF: Excitation Filter 2: Moved 107 steps in 369.9743 ms
17-02-28 20:04:07.143 -08 000000077 INF: Excitation Filter 1: Moved 107 steps in 370.0625 ms
17-02-28 20:04:07.143 -08 000000077 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.1909 ms
17-02-28 20:04:07.143 -08 000000077 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.2864 ms
17-02-28 20:04:07.143 -08 000000097 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.0704 ms
17-02-28 20:04:07.143 -08 000000097 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.4483 ms
17-02-28 20:04:07.143 -08 000000077 INF: ======================================
17-02-28 20:04:07.143 -08 000000097 INF: ======================================
17-02-28 20:04:07.145 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:07.145 -08 000000030 INF: Y Motor: Unshifted Position: 990717
17-02-28 20:04:07.145 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:07.145 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:07.146 -08 000000032 INF: ======================================
17-02-28 20:04:07.165 -08 000000073 INF: ======================================
17-02-28 20:04:07.166 -08 000000070 INF: ===================Camera TDI===================
17-02-28 20:04:07.168 -08 000000070 INF: ======================================
17-02-28 20:04:07.207 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:04:07.207 -08 000000030 INF: Y Motor: Moved to 14.9072 after 7861 ms
17-02-28 20:04:07.207 -08 000000030 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:07.208 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:07.270 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:07.271 -08 000000030 INF: Y Motor: Recv v 4097\r
17-02-28 20:04:07.271 -08 000000030 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:07.271 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:07.333 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:04:07.333 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:07.333 -08 000000030 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:07.394 -08 000000030 INF: Y Motor: Recv v 134217728\r
17-02-28 20:04:07.394 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:04:07.394 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:07.394 -08 000000030 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:07.456 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:04:07.456 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:07.456 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:07.456 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:07.520 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:07.521 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:04:07.521 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:07.521 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:07.582 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:07.583 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:04:07.583 -08 000000030 INF: ======================================
17-02-28 20:04:07.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:07.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:07.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:07.586 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:04:07.643 -08 000000034 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:04:07.643 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:07.706 -08 000000062 INF: FPGA: Recv TDIYERD 1490718
17-02-28 20:04:07.706 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:04:07.768 -08 000000080 INF: FPGA: Recv ZADCR 33886
17-02-28 20:04:07.768 -08 000000042 INF: At scan end Y pos = 14.907 and Z pos = -0.130. Y moved -48.539 mm
17-02-28 20:04:07.768 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:04:07.831 -08 000000078 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:04:07.831 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:04:07.831 -08 000000042 INF: TDIScan finished after 12653.9545 ms
17-02-28 20:04:07.831 -08 000000042 INF: Image[0]: Y should trigger at 63.446 mm, 2nd row was at 64.355 mm (error = 0.909 mm)
17-02-28 20:04:07.831 -08 000000042 INF: Image[2]: Y should trigger at 63.446 mm, 2nd row was at 64.355 mm (error = 0.909 mm)
17-02-28 20:04:07.832 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:07.833 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:07.868 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.529 um
17-02-28 20:04:07.868 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:07.869 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:04:07.893 -08 000000025 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:04:07.893 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:07.894 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:07.894 -08 000000065 INF: ===================Dither Clean Up Command===================
17-02-28 20:04:07.894 -08 000000085 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:04:07.894 -08 000000031 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:04:07.894 -08 000000094 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:04:07.894 -08 000000094 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:04:07.894 -08 000000085 INF: ======================================
17-02-28 20:04:07.895 -08 000000094 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:04:07.895 -08 000000031 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:07.895 -08 000000031 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:07.895 -08 000000095 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:04:07.895 -08 000000099 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:04:07.895 -08 000000099 INF: ======================================
17-02-28 20:04:07.896 -08 000000095 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:04:07.956 -08 000000062 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:07.956 -08 000000062 INF: FPGA: Recv ZSEL 
17-02-28 20:04:07.956 -08 000000095 INF: FPGA: Xmit ZDACW 39420\n
17-02-28 20:04:07.956 -08 000000094 INF: ======================================
17-02-28 20:04:07.958 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:07.958 -08 000000031 INF: ======================================
17-02-28 20:04:08.018 -08 000000090 INF: FPGA: Recv ZDACW 
17-02-28 20:04:08.019 -08 000000095 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:04:08.019 -08 000000095 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:04:08.080 -08 000000034 INF: FPGA: Recv TDIBB
17-02-28 20:04:08.080 -08 000000095 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:04:08.081 -08 000000095 INF: ======================================
17-02-28 20:04:08.082 -08 000000065 INF: ======================================
17-02-28 20:04:08.083 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:08.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:04:08.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:08.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:04:08.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:08.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:04:08.085 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:08.085 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:04:08.085 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:08.085 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:04:08.085 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:04:08.086 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:04:08.086 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-02-28 20:04:08.086 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:04:08.086 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:04:08.110 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:04:08.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:04:08.110 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:04:08.110 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:04:08.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 2===================
17-02-28 20:04:08.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface===================
17-02-28 20:04:08.127 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.129 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.129 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:08.129 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:08.156 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:08.157 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.157 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:04:08.157 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:04:08.228 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:08.230 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1201 Request: {"Cycle":2,"Lane":2,"Tile":1201,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF277","HCSMMF194","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.240 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1208 Request: {"Cycle":2,"Lane":2,"Tile":1208,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF222","HCSMMF287","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.258 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1203 Request: {"Cycle":2,"Lane":2,"Tile":1203,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF281","HCSMMF193","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.281 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1202 Request: {"Cycle":2,"Lane":2,"Tile":1202,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF177","HCSMMF263","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.294 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:08.340 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1209 Request: {"Cycle":2,"Lane":2,"Tile":1209,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF267","HCSMMF236","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.343 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1204 Request: {"Cycle":2,"Lane":2,"Tile":1204,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF203","HCSMMF227","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.345 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1206 Request: {"Cycle":2,"Lane":2,"Tile":1206,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF272","HCSMMF204","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.348 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1207 Request: {"Cycle":2,"Lane":2,"Tile":1207,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF276","HCSMMF285","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.350 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1205 Request: {"Cycle":2,"Lane":2,"Tile":1205,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF271","HCSMMF261","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.352 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1212 Request: {"Cycle":2,"Lane":2,"Tile":1212,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF264","HCSMMF205","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.354 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1211 Request: {"Cycle":2,"Lane":2,"Tile":1211,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF282","HCSMMF176","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.355 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1214 Request: {"Cycle":2,"Lane":2,"Tile":1214,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF240","HCSMMF238","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.357 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1210 Request: {"Cycle":2,"Lane":2,"Tile":1210,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF247","HCSMMF185","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.358 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1213 Request: {"Cycle":2,"Lane":2,"Tile":1213,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF235","HCSMMF220","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.359 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1218 Request: {"Cycle":2,"Lane":2,"Tile":1218,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF215","HCSMMF213","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.361 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1220 Request: {"Cycle":2,"Lane":2,"Tile":1220,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF199","HCSMMF190","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.362 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1221 Request: {"Cycle":2,"Lane":2,"Tile":1221,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF207","HCSMMF279","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.364 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1219 Request: {"Cycle":2,"Lane":2,"Tile":1219,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF286","HCSMMF254","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.366 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1215 Request: {"Cycle":2,"Lane":2,"Tile":1215,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF269","HCSMMF248","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.367 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1217 Request: {"Cycle":2,"Lane":2,"Tile":1217,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF209","HCSMMF197","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.368 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1216 Request: {"Cycle":2,"Lane":2,"Tile":1216,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF253","HCSMMF208","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.372 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1222 Request: {"Cycle":2,"Lane":2,"Tile":1222,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF206","HCSMMF273","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.375 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1223 Request: {"Cycle":2,"Lane":2,"Tile":1223,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF180","HCSMMF225","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.381 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1226 Request: {"Cycle":2,"Lane":2,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF212","HCSMMF242","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.387 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1224 Request: {"Cycle":2,"Lane":2,"Tile":1224,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF246","HCSMMF252","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.389 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1225 Request: {"Cycle":2,"Lane":2,"Tile":1225,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF181","HCSMMF211","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.390 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1228 Request: {"Cycle":2,"Lane":2,"Tile":1228,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF216","HCSMMF275","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.393 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 2 Tile: 1227 Request: {"Cycle":2,"Lane":2,"Tile":1227,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF186","HCSMMF249","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:08.395 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.401 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:04:08.490 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.490 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:04:08.528 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.534 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:04:08.534 -08 000000090 INF: FPGA: Recv MIOCOMPR
17-02-28 20:04:08.534 -08 000000042 INF: Compensator: Moved OutOfPath in 377 ms
17-02-28 20:04:08.534 -08 000000042 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:04:08.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.536 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.537 -08 000000097 INF: ===================Move Tilt Motor 1===================
17-02-28 20:04:08.537 -08 000000054 INF: ===================Move Tilt Motor 2===================
17-02-28 20:04:08.537 -08 000000077 INF: ===================Move Tilt Motor 3===================
17-02-28 20:04:08.537 -08 000000097 INF: ======================================
17-02-28 20:04:08.537 -08 000000077 INF: ======================================
17-02-28 20:04:08.537 -08 000000054 INF: ======================================
17-02-28 20:04:08.538 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:08.544 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:08.545 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:04:08.554 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:04:08.554 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:04:08.554 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:04:08.554 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:08.555 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:08.558 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:04:08.558 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:04:08.558 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:04:08.593 -08 000000070 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:08.593 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:08.593 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:04:08.593 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1504 mm
17-02-28 20:04:08.594 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:08.594 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:04:08.626 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.632 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:04:08.660 -08 000000100 INF: FPGA: Recv ZTRG 
17-02-28 20:04:08.661 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:04:08.712 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.718 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:04:08.720 -08 000000062 INF: FPGA: Recv ZYT 
17-02-28 20:04:08.721 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:04:08.721 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:04:08.780 -08 000000045 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:04:08.780 -08 000000045 INF: FPGA: Recv ZMV 
17-02-28 20:04:08.780 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:04:08.780 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 59.588 ms
17-02-28 20:04:08.780 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:04:08.810 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:08.844 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:08.846 -08 000000080 INF: FPGA: Recv ZDACR 60292
17-02-28 20:04:08.846 -08 000000042 INF: Z Motor: MoveAndTrigger took 252.5314 ms w/comms
17-02-28 20:04:08.846 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:04:08.846 -08 000000042 INF: Z Motor: MoveAbsStepped took 252.7017 ms
17-02-28 20:04:08.846 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:08.847 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:04:08.856 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:04:08.856 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:08.856 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:08.856 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:04:08.856 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:04:08.906 -08 000000033 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:08.907 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:08.916 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:08.917 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:04:08.925 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:04:08.925 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:08.925 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:08.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:08.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:04:08.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:08.928 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = C_1
17-02-28 20:04:08.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:08.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:08.930 -08 000000083 INF: ===================Move X,Y===================
17-02-28 20:04:08.930 -08 000000078 INF: ===================MoveEmissionFilters===================
17-02-28 20:04:08.930 -08 000000083 INF: ===================Move X,Y, Parallel===================
17-02-28 20:04:08.931 -08 000000031 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:08.931 -08 000000044 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:08.931 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:08.931 -08 000000080 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:08.931 -08 000000068 INF: ===================Move X Motor without settling===================
17-02-28 20:04:08.931 -08 000000040 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:08.931 -08 000000068 INF: X Motor: Xmit PR VM\n
17-02-28 20:04:08.931 -08 000000031 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:08.931 -08 000000040 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9072 mm
17-02-28 20:04:08.932 -08 000000044 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:08.932 -08 000000080 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:08.932 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:08.932 -08 000000040 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:08.932 -08 000000040 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:08.932 -08 000000034 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:04:08.932 -08 000000100 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:04:08.933 -08 000000095 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:04:08.933 -08 000000030 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:04:08.933 -08 000000054 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:04:08.933 -08 000000097 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:04:08.933 -08 000000095 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:04:08.933 -08 000000030 INF: ======================================
17-02-28 20:04:08.933 -08 000000095 INF: ======================================
17-02-28 20:04:08.933 -08 000000097 INF: ======================================
17-02-28 20:04:08.934 -08 000000034 INF: ======================================
17-02-28 20:04:08.934 -08 000000100 INF: ======================================
17-02-28 20:04:08.934 -08 000000054 INF: ======================================
17-02-28 20:04:08.935 -08 000000095 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:04:08.935 -08 000000031 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:08.935 -08 000000067 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:04:08.935 -08 000000080 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:08.936 -08 000000067 INF: ======================================
17-02-28 20:04:08.936 -08 000000062 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:08.936 -08 000000095 INF: ======================================
17-02-28 20:04:08.936 -08 000000031 INF: ======================================
17-02-28 20:04:08.937 -08 000000080 INF: ======================================
17-02-28 20:04:08.937 -08 000000062 INF: ======================================
17-02-28 20:04:08.937 -08 000000044 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:08.938 -08 000000044 INF: ======================================
17-02-28 20:04:08.940 -08 000000078 INF: ======================================
17-02-28 20:04:08.970 -08 000000068 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:04:08.970 -08 000000068 INF: X Motor: Xmit PR VI\n
17-02-28 20:04:08.970 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:04:08.970 -08 000000040 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:08.970 -08 000000040 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:09.034 -08 000000068 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:04:09.034 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:04:09.034 -08 000000040 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:09.034 -08 000000068 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:04:09.034 -08 000000068 INF: X Motor: Moving to 74.7156 mm @15.000 mm/sec, started at 72.4814 mm
17-02-28 20:04:09.034 -08 000000068 INF: X Motor: Xmit MA 6437\n
17-02-28 20:04:09.096 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:04:09.097 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:04:09.097 -08 000000040 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:09.097 -08 000000040 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:04:09.097 -08 000000040 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:04:09.098 -08 000000068 INF: X Motor: Recv MA 6437\r\n>
17-02-28 20:04:09.098 -08 000000068 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:04:09.157 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:04:09.157 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:09.157 -08 000000040 INF: Y Motor: Start the move command
17-02-28 20:04:09.157 -08 000000040 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:09.218 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:09.219 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:04:09.219 -08 000000040 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:04:09.219 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:09.345 -08 000000040 INF: Y Motor: Unshifted Position: 1074394
17-02-28 20:04:09.395 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:09.468 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:09.520 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:09.532 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:09.659 -08 000000040 INF: Y Motor: Unshifted Position: 1781549
17-02-28 20:04:09.709 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:09.718 -08 000000068 INF: X Motor: Xmit PR ER\n
17-02-28 20:04:09.783 -08 000000068 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:04:09.783 -08 000000068 INF: X Motor: Moved to 74.7153 after 685 ms
17-02-28 20:04:09.783 -08 000000068 INF: ======================================
17-02-28 20:04:09.784 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:09.833 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:09.844 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:09.970 -08 000000040 INF: Y Motor: Unshifted Position: 2557404
17-02-28 20:04:10.020 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:10.094 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:10.144 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:10.155 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:10.280 -08 000000040 INF: Y Motor: Unshifted Position: 3338177
17-02-28 20:04:10.330 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:10.405 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:10.457 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:10.470 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:10.593 -08 000000040 INF: Y Motor: Unshifted Position: 4123248
17-02-28 20:04:10.643 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:10.720 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:10.769 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:10.780 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:10.904 -08 000000040 INF: Y Motor: Unshifted Position: 4903190
17-02-28 20:04:10.954 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:11.030 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:11.081 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:11.090 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:11.218 -08 000000040 INF: Y Motor: Unshifted Position: 5675338
17-02-28 20:04:11.268 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:11.340 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:11.392 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:11.403 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:11.530 -08 000000040 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:04:11.530 -08 000000040 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:11.530 -08 000000040 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:11.592 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:04:11.592 -08 000000040 INF: Y Motor: Moved to 64.5335 after 2373 ms
17-02-28 20:04:11.592 -08 000000040 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:11.653 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:11.655 -08 000000040 INF: Y Motor: Recv v 4096\r
17-02-28 20:04:11.655 -08 000000040 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:11.655 -08 000000040 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:11.716 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:04:11.716 -08 000000040 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:11.716 -08 000000040 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:11.717 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:11.778 -08 000000040 INF: Y Motor: Recv v 402653184\r
17-02-28 20:04:11.778 -08 000000040 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:04:11.778 -08 000000040 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:11.778 -08 000000040 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:11.843 -08 000000040 INF: Y Motor: Recv v 0\r
17-02-28 20:04:11.843 -08 000000040 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:11.843 -08 000000040 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:11.843 -08 000000040 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:11.905 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:04:11.905 -08 000000040 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:11.905 -08 000000040 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:11.965 -08 000000040 INF: Y Motor: Recv ok\r
17-02-28 20:04:11.965 -08 000000040 INF: ======================================
17-02-28 20:04:11.966 -08 000000083 INF: ===================Move X,Y===================
17-02-28 20:04:11.967 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:11.967 -08 000000083 INF: ======================================
17-02-28 20:04:11.968 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:11.969 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:11.969 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:04:11.969 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:04:12.026 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:12.027 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:12.027 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:04:12.088 -08 000000051 INF: FPGA: Recv ZFREQCL
17-02-28 20:04:12.088 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:04:12.088 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:12.089 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:12.150 -08 000000062 INF: FPGA: Recv TDIYERD 6453353
17-02-28 20:04:12.150 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453353 counts (64.534 mm)
17-02-28 20:04:12.151 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:12.151 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:12.152 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:04:12.152 -08 000000044 INF: ===================Set YMotor gains for scans===================
17-02-28 20:04:12.152 -08 000000044 INF: ======================================
17-02-28 20:04:12.153 -08 000000084 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:04:12.153 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:04:12.154 -08 000000084 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:04:12.155 -08 000000084 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:04:12.155 -08 000000084 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:04:12.215 -08 000000029 INF: FPGA: Recv TDIYPOS
17-02-28 20:04:12.215 -08 000000084 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:04:12.217 -08 000000084 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:04:12.217 -08 000000084 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:04:12.276 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:12.278 -08 000000069 INF: FPGA: Recv TDIYARM2
17-02-28 20:04:12.279 -08 000000084 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:04:12.280 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:04:12.282 -08 000000084 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:04:12.282 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:04:12.283 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:04:12.284 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:04:12.285 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:12.340 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:12.590 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:12.651 -08 000000084 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:04:12.651 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:04:12.651 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:12.652 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:12.666 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:04:12.668 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:12.902 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:12.963 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:13.046 -08 000000084 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:04:13.046 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:04:13.046 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:13.061 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:04:13.063 -08 000000084 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:04:13.064 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:04:13.065 -08 000000084 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:13.066 -08 000000084 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:04:13.066 -08 000000084 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:13.068 -08 000000084 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:04:13.068 -08 000000084 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:04:13.068 -08 000000084 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:04:13.068 -08 000000084 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:04:13.088 -08 000000062 INF: FPGA: Recv ZYT 
17-02-28 20:04:13.088 -08 000000084 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:04:13.088 -08 000000084 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:04:13.150 -08 000000095 INF: FPGA: Recv ZARM
17-02-28 20:04:13.150 -08 000000084 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.1485 ms
17-02-28 20:04:13.150 -08 000000084 INF: Z Motor: ArmAbsStepped took 82.328 ms
17-02-28 20:04:13.151 -08 000000084 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:13.152 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:04:13.153 -08 000000084 INF: ======================================
17-02-28 20:04:13.154 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:13.155 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:13.155 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:13.155 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:13.156 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:13.157 -08 000000098 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:04:13.157 -08 000000069 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:04:13.157 -08 000000098 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:04:13.157 -08 000000098 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:04:13.157 -08 000000098 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:04:13.157 -08 000000098 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:04:13.157 -08 000000069 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:04:13.157 -08 000000069 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:04:13.157 -08 000000069 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:04:13.160 -08 000000069 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:04:13.215 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:13.276 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:13.523 -08 000000045 INF: FPGA: Recv EX1MV
17-02-28 20:04:13.523 -08 000000045 INF: FPGA: Recv EX2MV
17-02-28 20:04:13.523 -08 000000069 INF: Excitation Filter 2: Moved -107 steps in 365.5503 ms
17-02-28 20:04:13.523 -08 000000098 INF: Excitation Filter 1: Moved -107 steps in 365.7677 ms
17-02-28 20:04:13.523 -08 000000069 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.6818 ms
17-02-28 20:04:13.523 -08 000000098 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.8795 ms
17-02-28 20:04:13.523 -08 000000098 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.0121 ms
17-02-28 20:04:13.523 -08 000000069 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.7878 ms
17-02-28 20:04:13.524 -08 000000069 INF: ======================================
17-02-28 20:04:13.524 -08 000000098 INF: ======================================
17-02-28 20:04:13.525 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:13.526 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:13.526 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:13.527 -08 000000093 INF: ===================Serial===================
17-02-28 20:04:13.527 -08 000000054 INF: ===================Camera TDI===================
17-02-28 20:04:13.527 -08 000000034 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:13.527 -08 000000080 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:13.527 -08 000000080 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:04:13.528 -08 000000080 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:13.528 -08 000000080 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:13.528 -08 000000093 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:04:13.528 -08 000000093 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:04:13.528 -08 000000054 INF: ===================Camera TDI, Parallel===================
17-02-28 20:04:13.528 -08 000000034 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:04:13.529 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:04:13.529 -08 000000092 INF: ===================Camera TDI===================
17-02-28 20:04:13.530 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.530 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.531 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.531 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.535 -08 000000034 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:04:13.586 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:13.587 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:04:13.587 -08 000000080 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:13.587 -08 000000080 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:13.649 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:04:13.649 -08 000000080 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:13.680 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.680 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.681 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.681 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.713 -08 000000080 INF: Y Motor: Recv v 0\r
17-02-28 20:04:13.713 -08 000000080 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:13.713 -08 000000080 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:04:13.713 -08 000000080 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:04:13.776 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:04:13.776 -08 000000080 INF: Y Motor: Start the move command
17-02-28 20:04:13.776 -08 000000080 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:13.830 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.830 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.831 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.831 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.836 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:13.839 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:04:13.839 -08 000000080 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:04:13.839 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:13.900 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:13.964 -08 000000080 INF: Y Motor: Unshifted Position: 5935178
17-02-28 20:04:13.980 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.980 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:13.981 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:13.981 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:14.014 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:14.130 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:04:14.130 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:04:14.130 -08 000000077 INF: ===================Camera #0 Frame #1===================
17-02-28 20:04:14.131 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:04:14.131 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:04:14.131 -08 000000092 INF: ===================Camera #2 Frame #1===================
17-02-28 20:04:14.136 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:14.150 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:14.211 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:14.275 -08 000000080 INF: Y Motor: Unshifted Position: 5888529
17-02-28 20:04:14.283 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:04:14.283 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:04:14.283 -08 000000077 INF: ===================Camera #0 Frame #3===================
17-02-28 20:04:14.284 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:04:14.284 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:04:14.284 -08 000000092 INF: ===================Camera #2 Frame #3===================
17-02-28 20:04:14.325 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:14.439 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:04:14.439 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:04:14.439 -08 000000077 INF: ===================Camera #0 Frame #4===================
17-02-28 20:04:14.440 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:04:14.440 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:04:14.440 -08 000000092 INF: ===================Camera #2 Frame #4===================
17-02-28 20:04:14.450 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:14.461 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:14.523 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:14.585 -08 000000080 INF: Y Motor: Unshifted Position: 5841667
17-02-28 20:04:14.592 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:14.592 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:14.592 -08 000000077 INF: ===================Camera #0 Frame #5===================
17-02-28 20:04:14.593 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:14.593 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:14.593 -08 000000092 INF: ===================Camera #2 Frame #5===================
17-02-28 20:04:14.635 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:14.648 -08 000000047 INF: FPGA: Recv ZWAIT 
17-02-28 20:04:14.648 -08 000000047 INF: FPGA: Recv TDIYWAIT
17-02-28 20:04:14.648 -08 000000034 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:14.649 -08 000000093 INF: ===================Serial===================
17-02-28 20:04:14.650 -08 000000034 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:04:14.650 -08 000000093 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:04:14.651 -08 000000093 INF: ===================Serial===================
17-02-28 20:04:14.651 -08 000000036 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:04:14.651 -08 000000031 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:04:14.651 -08 000000036 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:04:14.651 -08 000000036 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:04:14.651 -08 000000036 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:04:14.651 -08 000000036 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:04:14.651 -08 000000031 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:04:14.651 -08 000000031 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:04:14.651 -08 000000031 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:04:14.652 -08 000000031 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:04:14.652 -08 000000093 INF: ======================================
17-02-28 20:04:14.745 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:04:14.745 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:04:14.745 -08 000000077 INF: ===================Camera #0 Frame #6===================
17-02-28 20:04:14.746 -08 000000092 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:04:14.746 -08 000000092 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:04:14.746 -08 000000092 INF: ===================Camera #2 Frame #6===================
17-02-28 20:04:14.748 -08 000000077 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:04:14.749 -08 000000077 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:14.749 -08 000000092 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:04:14.750 -08 000000092 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:14.761 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:14.772 -08 000000077 INF: Camera #0 ReleaseBuffer
17-02-28 20:04:14.772 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:04:14.773 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:14.773 -08 000000077 INF: ======================================
17-02-28 20:04:14.796 -08 000000092 INF: Camera #2 ReleaseBuffer
17-02-28 20:04:14.796 -08 000000092 INF: ===================Camera TDI===================
17-02-28 20:04:14.797 -08 000000092 INF: ======================================
17-02-28 20:04:14.799 -08 000000054 INF: ===================Camera TDI===================
17-02-28 20:04:14.800 -08 000000054 INF: ======================================
17-02-28 20:04:14.836 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:14.899 -08 000000080 INF: Y Motor: Unshifted Position: 5797060
17-02-28 20:04:14.949 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:15.021 -08 000000085 INF: FPGA: Recv EX1MV
17-02-28 20:04:15.021 -08 000000085 INF: FPGA: Recv EX2MV
17-02-28 20:04:15.021 -08 000000031 INF: Excitation Filter 2: Moved 107 steps in 369.6127 ms
17-02-28 20:04:15.021 -08 000000031 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.739 ms
17-02-28 20:04:15.021 -08 000000031 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.8435 ms
17-02-28 20:04:15.021 -08 000000036 INF: Excitation Filter 1: Moved 107 steps in 369.8841 ms
17-02-28 20:04:15.021 -08 000000036 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.0902 ms
17-02-28 20:04:15.021 -08 000000036 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.1647 ms
17-02-28 20:04:15.021 -08 000000031 INF: ======================================
17-02-28 20:04:15.021 -08 000000036 INF: ======================================
17-02-28 20:04:15.023 -08 000000034 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:15.024 -08 000000034 INF: ======================================
17-02-28 20:04:15.085 -08 000000080 INF: Y Motor: Unshifted Position: 5797041
17-02-28 20:04:15.085 -08 000000080 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:15.085 -08 000000080 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:15.086 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:15.146 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:15.147 -08 000000080 INF: Y Motor: Recv v 0\r
17-02-28 20:04:15.147 -08 000000080 INF: Y Motor: Moved to 62.9704 after 1308 ms
17-02-28 20:04:15.147 -08 000000080 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:15.209 -08 000000080 INF: Y Motor: Recv v 4097\r
17-02-28 20:04:15.209 -08 000000080 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:15.209 -08 000000080 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:15.273 -08 000000080 INF: Y Motor: Recv v 0\r
17-02-28 20:04:15.273 -08 000000080 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:15.273 -08 000000080 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:15.335 -08 000000080 INF: Y Motor: Recv v 134217728\r
17-02-28 20:04:15.335 -08 000000080 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:04:15.335 -08 000000080 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:15.335 -08 000000080 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:15.396 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:15.397 -08 000000080 INF: Y Motor: Recv v 0\r
17-02-28 20:04:15.397 -08 000000080 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:15.397 -08 000000080 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:15.397 -08 000000080 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:15.460 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:15.461 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:04:15.461 -08 000000080 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:15.461 -08 000000080 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:15.523 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:04:15.523 -08 000000080 INF: ======================================
17-02-28 20:04:15.524 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:15.525 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:15.526 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.526 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:04:15.583 -08 000000047 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:04:15.583 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:15.645 -08 000000031 INF: FPGA: Recv TDIYERD 6297044
17-02-28 20:04:15.645 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:04:15.708 -08 000000051 INF: FPGA: Recv ZADCR 2425
17-02-28 20:04:15.708 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:04:15.708 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:04:15.710 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:15.770 -08 000000031 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:04:15.770 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:04:15.770 -08 000000042 INF: TDIScan finished after 6853.4935 ms
17-02-28 20:04:15.770 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:04:15.770 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:04:15.770 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:04:15.771 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:15.832 -08 000000068 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:04:15.832 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.833 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.834 -08 000000039 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:04:15.834 -08 000000095 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:04:15.834 -08 000000102 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:04:15.834 -08 000000095 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:15.834 -08 000000095 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:15.834 -08 000000039 INF: ======================================
17-02-28 20:04:15.835 -08 000000102 INF: ======================================
17-02-28 20:04:15.898 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:04:15.898 -08 000000095 INF: ======================================
17-02-28 20:04:15.899 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.900 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.901 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:04:15.940 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.940 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:04:15.971 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:15.971 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:04:16.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:16.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:04:16.021 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:16.080 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:16.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:16.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:16.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:04:16.084 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:16.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:16.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:04:16.090 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:04:16.335 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:16.396 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:16.646 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:16.807 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:16.807 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:04:16.830 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0844698217952293Best Z position at top surface = -0.156161119420011Best Z position at top surface + compensator offset = -0.133461119420011 C:2,L:3,T
17-02-28 20:04:16.832 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.156161119420011
17-02-28 20:04:16.832 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.95831
17-02-28 20:04:16.832 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0844698217952293
17-02-28 20:04:16.832 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.61331
17-02-28 20:04:16.832 -08 000000042 INF: Z-height at LaneTopSurface is -0.156161119420011.
17-02-28 20:04:16.832 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:16.968 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:04:16.968 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:04:16.990 -08 000000067 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:16.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:04:16.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.992 -08 000000042 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:04:16.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.993 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.994 -08 000000036 INF: ===================Move Tilt Motor 1===================
17-02-28 20:04:16.994 -08 000000068 INF: ===================Move Tilt Motor 2===================
17-02-28 20:04:16.994 -08 000000065 INF: ===================Move Tilt Motor 3===================
17-02-28 20:04:16.994 -08 000000068 INF: ======================================
17-02-28 20:04:16.994 -08 000000036 INF: ======================================
17-02-28 20:04:16.995 -08 000000065 INF: ======================================
17-02-28 20:04:16.996 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.997 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.997 -08 000000042 INF: ETF Best Z: -0.1334611 mm (34985 DAC)
17-02-28 20:04:16.997 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.998 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:16.998 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:04:16.998 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:04:17.424 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:17.427 -08 000000099 INF: FPGA: Recv MIOCOMPF
17-02-28 20:04:17.427 -08 000000042 INF: Compensator: Moved IntoPath in 428 ms
17-02-28 20:04:17.427 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:17.429 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:17.435 -08 000000042 INF: Swath 1 position calculated to be: {X=74.16164, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:04:17.435 -08 000000042 INF: Swath 2 position calculated to be: {X=75.26964, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:04:17.440 -08 000000042 INF: Swath 0: Converted transform from (-46.66878, 5.060077) pixels to (-0.016215, 0.001725) mm.
17-02-28 20:04:17.446 -08 000000042 INF: Swath 1: Converted transform from (-67.79903, 6.334889) pixels to (-0.02346, 0.00207) mm.
17-02-28 20:04:17.446 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:04:17.447 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:04:17.447 -08 000000042 INF: Transformed XStagePosition from 74.16164 mm to 74.1454213522375 mm.
17-02-28 20:04:17.458 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5548143554488 mm.
17-02-28 20:04:17.458 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3548143554488 mm.
17-02-28 20:04:17.458 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4455643554488 mm.
17-02-28 20:04:17.460 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:17.461 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:04:17.461 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:17.461 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = C_1
17-02-28 20:04:17.466 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:17.467 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:17.467 -08 000000029 INF: ===================MoveEmissionFilters===================
17-02-28 20:04:17.468 -08 000000062 INF: ===================Move X,Y===================
17-02-28 20:04:17.468 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:17.468 -08 000000062 INF: ===================Move X,Y, Parallel===================
17-02-28 20:04:17.468 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:17.468 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:17.468 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:04:17.468 -08 000000039 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:17.468 -08 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:17.469 -08 000000069 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:04:17.469 -08 000000069 INF: Z Motor: Moving to -0.1535 mm, started at -0.0100 mm
17-02-28 20:04:17.469 -08 000000069 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:04:17.469 -08 000000065 INF: ===================Move X Motor without settling===================
17-02-28 20:04:17.469 -08 000000051 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:17.469 -08 000000039 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:17.469 -08 000000065 INF: X Motor: Xmit PR VM\n
17-02-28 20:04:17.469 -08 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:17.469 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:17.470 -08 000000051 INF: Y Motor: Moving to 64.5548 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:04:17.470 -08 000000051 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:17.470 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:17.470 -08 000000031 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:04:17.470 -08 000000044 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:04:17.470 -08 000000073 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:04:17.470 -08 000000033 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:04:17.470 -08 000000025 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:04:17.470 -08 000000083 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:04:17.471 -08 000000031 INF: ======================================
17-02-28 20:04:17.471 -08 000000083 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:04:17.471 -08 000000033 INF: ======================================
17-02-28 20:04:17.471 -08 000000025 INF: ======================================
17-02-28 20:04:17.471 -08 000000083 INF: ======================================
17-02-28 20:04:17.471 -08 000000073 INF: ======================================
17-02-28 20:04:17.472 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:17.472 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:17.473 -08 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:17.473 -08 000000083 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:04:17.473 -08 000000093 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:04:17.473 -08 000000083 INF: ======================================
17-02-28 20:04:17.474 -08 000000093 INF: ======================================
17-02-28 20:04:17.474 -08 000000070 INF: ======================================
17-02-28 20:04:17.474 -08 000000068 INF: ======================================
17-02-28 20:04:17.474 -08 000000044 INF: ======================================
17-02-28 20:04:17.475 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:17.475 -08 000000039 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:17.476 -08 000000067 INF: ======================================
17-02-28 20:04:17.477 -08 000000039 INF: ======================================
17-02-28 20:04:17.478 -08 000000029 INF: ======================================
17-02-28 20:04:17.486 -08 000000054 INF: FPGA: Recv ZTRG 
17-02-28 20:04:17.486 -08 000000069 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:04:17.487 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:17.551 -08 000000095 INF: FPGA: Recv ZYT 
17-02-28 20:04:17.551 -08 000000069 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:04:17.551 -08 000000069 INF: FPGA: Xmit ZMV 40228\n
17-02-28 20:04:17.553 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:04:17.553 -08 000000051 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:17.553 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:17.555 -08 000000065 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:04:17.555 -08 000000065 INF: X Motor: Xmit PR VI\n
17-02-28 20:04:17.613 -08 000000090 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:04:17.613 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:04:17.615 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:04:17.615 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:17.615 -08 000000065 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:04:17.615 -08 000000065 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:04:17.615 -08 000000065 INF: X Motor: Moving to 74.1454 mm @15.000 mm/sec, started at 74.7153 mm
17-02-28 20:04:17.615 -08 000000065 INF: X Motor: Xmit MA 6204\n
17-02-28 20:04:17.677 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:04:17.677 -08 000000051 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:17.677 -08 000000065 INF: X Motor: Recv MA 6204\r\n>
17-02-28 20:04:17.677 -08 000000051 INF: Y Motor: Set target position to 5955481 encoder counts
17-02-28 20:04:17.677 -08 000000051 INF: Y Motor: Xmit s r0xca 5955481\r
17-02-28 20:04:17.677 -08 000000065 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:04:17.736 -08 000000094 INF: FPGA: Recv ZMV 
17-02-28 20:04:17.736 -08 000000069 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.2515 ms
17-02-28 20:04:17.736 -08 000000069 INF: FPGA: Xmit ZDACR\n
17-02-28 20:04:17.737 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:17.738 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:04:17.738 -08 000000051 INF: Y Motor: Start the move command
17-02-28 20:04:17.738 -08 000000051 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:17.800 -08 000000098 INF: FPGA: Recv ZDACR 40228
17-02-28 20:04:17.800 -08 000000069 INF: Z Motor: MoveAndTrigger took 330.9947 ms w/comms
17-02-28 20:04:17.800 -08 000000069 INF: Z Motor: After move to -0.1535, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:04:17.800 -08 000000069 INF: Z Motor: MoveAbsStepped took 331.1695 ms
17-02-28 20:04:17.800 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:17.801 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:17.802 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:04:17.802 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:04:17.802 -08 000000051 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:04:17.802 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:17.803 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:04:17.803 -08 000000029 INF: ===================Camera Arm TDI===================
17-02-28 20:04:17.803 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:17.803 -08 000000029 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:17.804 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:04:17.804 -08 000000029 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:17.804 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:17.805 -08 000000090 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:04:17.860 -08 000000067 INF: FPGA: Recv ZSEL 
17-02-28 20:04:17.861 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:17.861 -08 000000090 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:04:17.925 -08 000000040 INF: FPGA: Recv TDIBB
17-02-28 20:04:17.925 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:17.926 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:04:17.927 -08 000000051 INF: Y Motor: Unshifted Position: 5881018
17-02-28 20:04:17.927 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:17.928 -08 000000090 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:04:17.928 -08 000000090 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:04:17.928 -08 000000090 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:04:17.977 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:17.987 -08 000000031 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:17.987 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:17.989 -08 000000090 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:04:17.989 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:17.991 -08 000000090 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:04:17.991 -08 000000090 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:04:17.991 -08 000000090 INF: Z Motor: Arming to move to -0.1135 mm
17-02-28 20:04:17.991 -08 000000090 INF: FPGA: Xmit ZYT 6435481 4\n
17-02-28 20:04:18.049 -08 000000063 INF: FPGA: Recv ZYT 
17-02-28 20:04:18.049 -08 000000090 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6381018 enc / 63.810 mm / ) = 6435481 enc / 64.355 mm
17-02-28 20:04:18.049 -08 000000090 INF: FPGA: Xmit ZARM 29743\n
17-02-28 20:04:18.051 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:18.101 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:18.111 -08 000000073 INF: FPGA: Recv ZARM
17-02-28 20:04:18.111 -08 000000090 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9078 ms
17-02-28 20:04:18.111 -08 000000090 INF: Z Motor: ArmAbsStepped took 120.0762 ms
17-02-28 20:04:18.111 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:18.112 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:18.112 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:04:18.113 -08 000000065 INF: X Motor: Xmit PR ER\n
17-02-28 20:04:18.114 -08 000000090 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:04:18.114 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:04:18.116 -08 000000090 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:04:18.116 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:04:18.117 -08 000000090 INF: ======================================
17-02-28 20:04:18.175 -08 000000065 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:04:18.175 -08 000000065 INF: X Motor: Moved to 74.1465 after 497 ms
17-02-28 20:04:18.175 -08 000000065 INF: ======================================
17-02-28 20:04:18.239 -08 000000051 INF: Y Motor: Unshifted Position: 5955482
17-02-28 20:04:18.239 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:18.239 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:18.301 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:04:18.301 -08 000000051 INF: Y Motor: Moved to 64.5548 after 498 ms
17-02-28 20:04:18.301 -08 000000051 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:18.362 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:18.363 -08 000000051 INF: Y Motor: Recv v 4096\r
17-02-28 20:04:18.363 -08 000000051 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:18.363 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:18.425 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:18.426 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:04:18.426 -08 000000051 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:18.426 -08 000000051 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:18.488 -08 000000051 INF: Y Motor: Recv v 402653184\r
17-02-28 20:04:18.488 -08 000000051 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:04:18.488 -08 000000051 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:18.488 -08 000000051 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:18.550 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:04:18.550 -08 000000051 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:18.550 -08 000000051 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:18.550 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:18.612 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:04:18.612 -08 000000051 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:18.612 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:18.674 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:04:18.674 -08 000000051 INF: ======================================
17-02-28 20:04:18.675 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:18.675 -08 000000062 INF: ===================Move X,Y===================
17-02-28 20:04:18.676 -08 000000062 INF: ======================================
17-02-28 20:04:18.735 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:18.759 -08 000000029 INF: Camera #0 AttachBuffer (imageDataPtr = 56909434928 imgPtr = 56909434928 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:04:18.759 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:04:18.760 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:18.775 -08 000000029 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:18.777 -08 000000029 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:18.985 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:19.049 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:19.299 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:19.360 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:19.610 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:19.672 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:19.756 -08 000000029 INF: Camera #2 AttachBuffer (imageDataPtr = 58721374256 imgPtr = 59627343920 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:04:19.757 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:04:19.757 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:19.772 -08 000000029 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:19.774 -08 000000029 INF: ===================Camera Arm TDI===================
17-02-28 20:04:19.775 -08 000000029 INF: ======================================
17-02-28 20:04:19.776 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:19.777 -08 000000069 INF: ======================================
17-02-28 20:04:19.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:19.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:19.779 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:04:19.779 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:04:19.861 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:19.861 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:04:19.921 -08 000000092 INF: FPGA: Recv ZFREQCL
17-02-28 20:04:19.921 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:04:19.921 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:19.921 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:19.922 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:19.984 -08 000000098 INF: FPGA: Recv TDIYERD 6455482
17-02-28 20:04:19.984 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455482 counts (64.555 mm)
17-02-28 20:04:19.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:19.985 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:19.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:19.985 -08 000000033 INF: ===================TDI FPGA Arm===================
17-02-28 20:04:19.985 -08 000000070 INF: ===================Set YMotor gains for scans===================
17-02-28 20:04:19.986 -08 000000070 INF: ======================================
17-02-28 20:04:19.986 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:19.987 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:04:19.987 -08 000000033 INF: FPGA: Xmit TDIYPOS 6344556\n
17-02-28 20:04:20.046 -08 000000068 INF: FPGA: Recv TDIYPOS
17-02-28 20:04:20.046 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:20.047 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:04:20.048 -08 000000033 INF: FPGA: Xmit TDIYARM3 139264 6435481 1 1\n
17-02-28 20:04:20.108 -08 000000044 INF: FPGA: Recv TDIYARM3
17-02-28 20:04:20.108 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:20.109 -08 000000033 INF: ===================TDI FPGA Arm===================
17-02-28 20:04:20.110 -08 000000033 INF: ======================================
17-02-28 20:04:20.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:20.112 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:20.112 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:20.112 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:20.113 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:20.114 -08 000000025 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:04:20.114 -08 000000094 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:04:20.114 -08 000000025 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:04:20.114 -08 000000025 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:04:20.114 -08 000000025 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:04:20.114 -08 000000094 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:04:20.114 -08 000000025 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:04:20.114 -08 000000094 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:04:20.114 -08 000000094 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:04:20.115 -08 000000094 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:04:20.235 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:20.295 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:20.482 -08 000000054 INF: FPGA: Recv EX2MV
17-02-28 20:04:20.482 -08 000000054 INF: FPGA: Recv EX1MV
17-02-28 20:04:20.482 -08 000000094 INF: Excitation Filter 1: Moved -107 steps in 367.6819 ms
17-02-28 20:04:20.482 -08 000000025 INF: Excitation Filter 2: Moved -107 steps in 367.8788 ms
17-02-28 20:04:20.482 -08 000000094 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.8336 ms
17-02-28 20:04:20.482 -08 000000094 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.9404 ms
17-02-28 20:04:20.482 -08 000000025 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.9768 ms
17-02-28 20:04:20.482 -08 000000025 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.1491 ms
17-02-28 20:04:20.482 -08 000000094 INF: ======================================
17-02-28 20:04:20.482 -08 000000025 INF: ======================================
17-02-28 20:04:20.483 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:20.484 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:20.485 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:04:20.485 -08 000000095 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:20.485 -08 000000039 INF: ===================FPGA Z Wait===================
17-02-28 20:04:20.485 -08 000000090 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:20.486 -08 000000039 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:04:20.486 -08 000000090 INF: Y Motor: Moving to 14.9065 mm @6.500 mm/sec, started at 64.5548 mm
17-02-28 20:04:20.486 -08 000000090 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:20.486 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:20.486 -08 000000032 INF: ===================Camera TDI, Parallel===================
17-02-28 20:04:20.486 -08 000000095 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:04:20.487 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:04:20.487 -08 000000031 INF: ===================Camera TDI===================
17-02-28 20:04:20.489 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:20.489 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:20.490 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:20.490 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:20.492 -08 000000095 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:04:20.545 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:20.546 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:04:20.546 -08 000000090 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:20.546 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:20.609 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:20.610 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:04:20.610 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:20.639 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:20.639 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:20.640 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:20.640 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:20.672 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:04:20.672 -08 000000090 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:20.672 -08 000000090 INF: Y Motor: Set target position to 990648 encoder counts
17-02-28 20:04:20.672 -08 000000090 INF: Y Motor: Xmit s r0xca 990648\r
17-02-28 20:04:20.734 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:04:20.734 -08 000000090 INF: Y Motor: Start the move command
17-02-28 20:04:20.734 -08 000000090 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:20.789 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:20.789 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:20.790 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:20.790 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:20.796 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:04:20.796 -08 000000090 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:04:20.796 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:20.855 -08 000000083 INF: FPGA: Recv ZWAIT 
17-02-28 20:04:20.855 -08 000000039 INF: ======================================
17-02-28 20:04:20.859 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:20.921 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:20.922 -08 000000090 INF: Y Motor: Unshifted Position: 5894280
17-02-28 20:04:20.939 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:20.939 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:20.939 -08 000000034 INF: ===================Camera #0 Frame #5===================
17-02-28 20:04:20.940 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:20.940 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:20.940 -08 000000031 INF: ===================Camera #2 Frame #5===================
17-02-28 20:04:20.972 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.096 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.106 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:04:21.106 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:04:21.106 -08 000000034 INF: ===================Camera #0 Frame #11===================
17-02-28 20:04:21.107 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:04:21.107 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:04:21.107 -08 000000031 INF: ===================Camera #2 Frame #11===================
17-02-28 20:04:21.171 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:21.233 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:21.234 -08 000000090 INF: Y Motor: Unshifted Position: 5690613
17-02-28 20:04:21.274 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:04:21.274 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:04:21.274 -08 000000034 INF: ===================Camera #0 Frame #17===================
17-02-28 20:04:21.279 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:04:21.279 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:04:21.279 -08 000000031 INF: ===================Camera #2 Frame #17===================
17-02-28 20:04:21.284 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.407 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.442 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:21.442 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:21.442 -08 000000034 INF: ===================Camera #0 Frame #23===================
17-02-28 20:04:21.451 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:21.451 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:21.451 -08 000000031 INF: ===================Camera #2 Frame #23===================
17-02-28 20:04:21.483 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:21.544 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:21.545 -08 000000090 INF: Y Motor: Unshifted Position: 5487170
17-02-28 20:04:21.595 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.611 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:04:21.611 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:04:21.611 -08 000000034 INF: ===================Camera #0 Frame #29===================
17-02-28 20:04:21.623 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:04:21.623 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:04:21.623 -08 000000031 INF: ===================Camera #2 Frame #30===================
17-02-28 20:04:21.722 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.780 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:04:21.780 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:04:21.780 -08 000000034 INF: ===================Camera #0 Frame #35===================
17-02-28 20:04:21.794 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:21.799 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:04:21.799 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:04:21.799 -08 000000031 INF: ===================Camera #2 Frame #36===================
17-02-28 20:04:21.856 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:21.857 -08 000000090 INF: Y Motor: Unshifted Position: 5284148
17-02-28 20:04:21.907 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:21.949 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:04:21.949 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:04:21.949 -08 000000034 INF: ===================Camera #0 Frame #42===================
17-02-28 20:04:21.972 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:04:21.972 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:04:21.972 -08 000000031 INF: ===================Camera #2 Frame #43===================
17-02-28 20:04:22.030 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.106 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:22.122 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:04:22.122 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:04:22.122 -08 000000034 INF: ===================Camera #0 Frame #48===================
17-02-28 20:04:22.149 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:04:22.149 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:04:22.149 -08 000000031 INF: ===================Camera #2 Frame #49===================
17-02-28 20:04:22.169 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:22.170 -08 000000090 INF: Y Motor: Unshifted Position: 5081774
17-02-28 20:04:22.220 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.292 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:04:22.292 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:04:22.292 -08 000000034 INF: ===================Camera #0 Frame #54===================
17-02-28 20:04:22.322 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:04:22.322 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:04:22.322 -08 000000031 INF: ===================Camera #2 Frame #55===================
17-02-28 20:04:22.344 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.419 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:22.462 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:04:22.462 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:04:22.462 -08 000000034 INF: ===================Camera #0 Frame #61===================
17-02-28 20:04:22.479 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:22.480 -08 000000090 INF: Y Motor: Unshifted Position: 4877675
17-02-28 20:04:22.495 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:04:22.495 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:04:22.495 -08 000000031 INF: ===================Camera #2 Frame #62===================
17-02-28 20:04:22.530 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.633 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:04:22.633 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:04:22.633 -08 000000034 INF: ===================Camera #0 Frame #67===================
17-02-28 20:04:22.656 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.672 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:04:22.672 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:04:22.672 -08 000000031 INF: ===================Camera #2 Frame #68===================
17-02-28 20:04:22.729 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:22.792 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:22.792 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:22.792 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:22.793 -08 000000090 INF: Y Motor: Unshifted Position: 4676177
17-02-28 20:04:22.793 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:04:22.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 5 of 5 seconds left===================
17-02-28 20:04:22.803 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:04:22.803 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:04:22.803 -08 000000034 INF: ===================Camera #0 Frame #73===================
17-02-28 20:04:22.843 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.844 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:04:22.844 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:04:22.844 -08 000000031 INF: ===================Camera #2 Frame #75===================
17-02-28 20:04:22.968 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:22.973 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:04:22.973 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:04:22.973 -08 000000034 INF: ===================Camera #0 Frame #79===================
17-02-28 20:04:23.023 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:04:23.023 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:04:23.023 -08 000000031 INF: ===================Camera #2 Frame #81===================
17-02-28 20:04:23.105 -08 000000090 INF: Y Motor: Unshifted Position: 4472503
17-02-28 20:04:23.143 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:04:23.143 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:04:23.143 -08 000000034 INF: ===================Camera #0 Frame #86===================
17-02-28 20:04:23.155 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:23.197 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:04:23.197 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:04:23.197 -08 000000031 INF: ===================Camera #2 Frame #88===================
17-02-28 20:04:23.279 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:23.316 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:04:23.316 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:04:23.316 -08 000000034 INF: ===================Camera #0 Frame #92===================
17-02-28 20:04:23.374 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:04:23.374 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:04:23.374 -08 000000031 INF: ===================Camera #2 Frame #94===================
17-02-28 20:04:23.415 -08 000000090 INF: Y Motor: Unshifted Position: 4271005
17-02-28 20:04:23.465 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:23.486 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:04:23.486 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:04:23.486 -08 000000034 INF: ===================Camera #0 Frame #98===================
17-02-28 20:04:23.547 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:04:23.547 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:04:23.547 -08 000000031 INF: ===================Camera #2 Frame #101===================
17-02-28 20:04:23.590 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:23.656 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:04:23.656 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:04:23.656 -08 000000034 INF: ===================Camera #0 Frame #105===================
17-02-28 20:04:23.724 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:04:23.724 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:04:23.724 -08 000000031 INF: ===================Camera #2 Frame #107===================
17-02-28 20:04:23.729 -08 000000090 INF: Y Motor: Unshifted Position: 4066680
17-02-28 20:04:23.779 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:23.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:23.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 4 of 5 seconds left===================
17-02-28 20:04:23.829 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:04:23.829 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:04:23.829 -08 000000034 INF: ===================Camera #0 Frame #111===================
17-02-28 20:04:23.897 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:04:23.897 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:04:23.897 -08 000000031 INF: ===================Camera #2 Frame #113===================
17-02-28 20:04:23.903 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:23.999 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:04:23.999 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:04:23.999 -08 000000034 INF: ===================Camera #0 Frame #117===================
17-02-28 20:04:24.043 -08 000000090 INF: Y Motor: Unshifted Position: 3863881
17-02-28 20:04:24.070 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:04:24.070 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:04:24.070 -08 000000031 INF: ===================Camera #2 Frame #120===================
17-02-28 20:04:24.093 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:24.169 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:04:24.169 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:04:24.169 -08 000000034 INF: ===================Camera #0 Frame #123===================
17-02-28 20:04:24.215 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:24.245 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:04:24.245 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:04:24.245 -08 000000031 INF: ===================Camera #2 Frame #126===================
17-02-28 20:04:24.339 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:04:24.339 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:04:24.339 -08 000000034 INF: ===================Camera #0 Frame #130===================
17-02-28 20:04:24.351 -08 000000090 INF: Y Motor: Unshifted Position: 3662165
17-02-28 20:04:24.401 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:24.416 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:04:24.416 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:04:24.416 -08 000000031 INF: ===================Camera #2 Frame #133===================
17-02-28 20:04:24.511 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:04:24.511 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:04:24.511 -08 000000034 INF: ===================Camera #0 Frame #136===================
17-02-28 20:04:24.526 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:24.590 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:04:24.590 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:04:24.590 -08 000000031 INF: ===================Camera #2 Frame #139===================
17-02-28 20:04:24.665 -08 000000090 INF: Y Motor: Unshifted Position: 3457847
17-02-28 20:04:24.681 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:04:24.681 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:04:24.681 -08 000000034 INF: ===================Camera #0 Frame #142===================
17-02-28 20:04:24.715 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:24.761 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:04:24.761 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:04:24.761 -08 000000031 INF: ===================Camera #2 Frame #145===================
17-02-28 20:04:24.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:24.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 3 of 5 seconds left===================
17-02-28 20:04:24.839 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:24.851 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:04:24.851 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:04:24.851 -08 000000034 INF: ===================Camera #0 Frame #149===================
17-02-28 20:04:24.932 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:04:24.932 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:04:24.932 -08 000000031 INF: ===================Camera #2 Frame #152===================
17-02-28 20:04:24.975 -08 000000090 INF: Y Motor: Unshifted Position: 3256352
17-02-28 20:04:25.024 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:04:25.024 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:04:25.024 -08 000000034 INF: ===================Camera #0 Frame #155===================
17-02-28 20:04:25.025 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:25.106 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:04:25.106 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:04:25.106 -08 000000031 INF: ===================Camera #2 Frame #158===================
17-02-28 20:04:25.150 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:25.194 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:04:25.194 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:04:25.194 -08 000000034 INF: ===================Camera #0 Frame #161===================
17-02-28 20:04:25.277 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:04:25.277 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:04:25.277 -08 000000031 INF: ===================Camera #2 Frame #164===================
17-02-28 20:04:25.289 -08 000000090 INF: Y Motor: Unshifted Position: 3052036
17-02-28 20:04:25.339 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:25.364 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:04:25.364 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:04:25.364 -08 000000034 INF: ===================Camera #0 Frame #167===================
17-02-28 20:04:25.447 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:04:25.447 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:04:25.447 -08 000000031 INF: ===================Camera #2 Frame #171===================
17-02-28 20:04:25.463 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:25.534 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:04:25.534 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:04:25.534 -08 000000034 INF: ===================Camera #0 Frame #174===================
17-02-28 20:04:25.599 -08 000000090 INF: Y Motor: Unshifted Position: 2850547
17-02-28 20:04:25.621 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:04:25.621 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:04:25.621 -08 000000031 INF: ===================Camera #2 Frame #177===================
17-02-28 20:04:25.649 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:25.708 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:04:25.708 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:04:25.708 -08 000000034 INF: ===================Camera #0 Frame #180===================
17-02-28 20:04:25.774 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:25.792 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:04:25.792 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:04:25.792 -08 000000031 INF: ===================Camera #2 Frame #183===================
17-02-28 20:04:25.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:25.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 2 of 5 seconds left===================
17-02-28 20:04:25.878 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:04:25.878 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:04:25.878 -08 000000034 INF: ===================Camera #0 Frame #186===================
17-02-28 20:04:25.913 -08 000000090 INF: Y Motor: Unshifted Position: 2646225
17-02-28 20:04:25.962 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:04:25.962 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:04:25.962 -08 000000031 INF: ===================Camera #2 Frame #189===================
17-02-28 20:04:25.963 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.037 -08 000000098 INF: RunCopyService queue size at 2/28/2017 8:04:26 PM is 2
17-02-28 20:04:26.048 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:04:26.048 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:04:26.048 -08 000000034 INF: ===================Camera #0 Frame #193===================
17-02-28 20:04:26.086 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.133 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:04:26.133 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:04:26.133 -08 000000031 INF: ===================Camera #2 Frame #196===================
17-02-28 20:04:26.221 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:04:26.221 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:04:26.221 -08 000000034 INF: ===================Camera #0 Frame #199===================
17-02-28 20:04:26.226 -08 000000090 INF: Y Motor: Unshifted Position: 2442783
17-02-28 20:04:26.276 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.308 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:04:26.308 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:04:26.308 -08 000000031 INF: ===================Camera #2 Frame #202===================
17-02-28 20:04:26.390 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:04:26.390 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:04:26.390 -08 000000034 INF: ===================Camera #0 Frame #205===================
17-02-28 20:04:26.400 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.478 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:04:26.478 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:04:26.478 -08 000000031 INF: ===================Camera #2 Frame #208===================
17-02-28 20:04:26.536 -08 000000090 INF: Y Motor: Unshifted Position: 2241930
17-02-28 20:04:26.560 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:04:26.560 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:04:26.560 -08 000000034 INF: ===================Camera #0 Frame #211===================
17-02-28 20:04:26.586 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.652 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:04:26.652 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:04:26.652 -08 000000031 INF: ===================Camera #2 Frame #215===================
17-02-28 20:04:26.711 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.730 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:04:26.730 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:04:26.730 -08 000000034 INF: ===================Camera #0 Frame #218===================
17-02-28 20:04:26.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:26.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 1 of 5 seconds left===================
17-02-28 20:04:26.829 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:04:26.829 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:04:26.829 -08 000000031 INF: ===================Camera #2 Frame #221===================
17-02-28 20:04:26.850 -08 000000090 INF: Y Motor: Unshifted Position: 2037613
17-02-28 20:04:26.900 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:26.903 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:04:26.903 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:04:26.903 -08 000000034 INF: ===================Camera #0 Frame #224===================
17-02-28 20:04:27.002 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-02-28 20:04:27.002 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-02-28 20:04:27.002 -08 000000031 INF: ===================Camera #2 Frame #228===================
17-02-28 20:04:27.023 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.073 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:04:27.073 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:04:27.073 -08 000000034 INF: ===================Camera #0 Frame #230===================
17-02-28 20:04:27.162 -08 000000090 INF: Y Motor: Unshifted Position: 1834596
17-02-28 20:04:27.179 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-02-28 20:04:27.179 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-02-28 20:04:27.179 -08 000000031 INF: ===================Camera #2 Frame #234===================
17-02-28 20:04:27.212 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.243 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:04:27.243 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:04:27.243 -08 000000034 INF: ===================Camera #0 Frame #237===================
17-02-28 20:04:27.336 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.352 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 240, frameCount = 241.
17-02-28 20:04:27.352 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 241
17-02-28 20:04:27.352 -08 000000031 INF: ===================Camera #2 Frame #241===================
17-02-28 20:04:27.416 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:04:27.416 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:04:27.416 -08 000000034 INF: ===================Camera #0 Frame #243===================
17-02-28 20:04:27.472 -08 000000090 INF: Y Motor: Unshifted Position: 1633091
17-02-28 20:04:27.522 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.529 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247.
17-02-28 20:04:27.529 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247
17-02-28 20:04:27.529 -08 000000031 INF: ===================Camera #2 Frame #247===================
17-02-28 20:04:27.586 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:04:27.586 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:04:27.586 -08 000000034 INF: ===================Camera #0 Frame #249===================
17-02-28 20:04:27.647 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.702 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-02-28 20:04:27.702 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-02-28 20:04:27.702 -08 000000031 INF: ===================Camera #2 Frame #253===================
17-02-28 20:04:27.756 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:04:27.756 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:04:27.756 -08 000000034 INF: ===================Camera #0 Frame #255===================
17-02-28 20:04:27.786 -08 000000090 INF: Y Motor: Unshifted Position: 1428991
17-02-28 20:04:27.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:27.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:27.794 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:04:27.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:27.836 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.875 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 259, frameCount = 260.
17-02-28 20:04:27.875 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 260
17-02-28 20:04:27.875 -08 000000031 INF: ===================Camera #2 Frame #260===================
17-02-28 20:04:27.893 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:04:27.926 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:04:27.926 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:04:27.926 -08 000000034 INF: ===================Camera #0 Frame #262===================
17-02-28 20:04:27.960 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:27.970 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF)
17-02-28 20:04:27.970 -08 000000018 INF: Current Position of Pump is: 11904
17-02-28 20:04:28.052 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266.
17-02-28 20:04:28.052 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266
17-02-28 20:04:28.052 -08 000000031 INF: ===================Camera #2 Frame #266===================
17-02-28 20:04:28.070 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:04:28.098 -08 000000090 INF: Y Motor: Unshifted Position: 1225960
17-02-28 20:04:28.100 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:04:28.100 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:04:28.100 -08 000000034 INF: ===================Camera #0 Frame #268===================
17-02-28 20:04:28.148 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:28.159 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF)
17-02-28 20:04:28.159 -08 000000018 INF: Current Position of Pump is: 11904
17-02-28 20:04:28.159 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Dispensing port PortC===================
17-02-28 20:04:28.220 -08 000000039 INF: FPGA: Recv TDIYWAIT
17-02-28 20:04:28.220 -08 000000095 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:28.221 -08 000000095 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:04:28.222 -08 000000069 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:04:28.222 -08 000000078 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:04:28.223 -08 000000069 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:04:28.223 -08 000000069 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:04:28.223 -08 000000069 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:04:28.223 -08 000000078 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:04:28.223 -08 000000078 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:04:28.223 -08 000000078 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:04:28.223 -08 000000069 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:04:28.224 -08 000000078 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:04:28.225 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:04:28.225 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:04:28.225 -08 000000031 INF: ===================Camera #2 Frame #272===================
17-02-28 20:04:28.248 -08 000000031 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:04:28.249 -08 000000031 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:28.259 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD11904R\r
17-02-28 20:04:28.272 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:28.345 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:28.408 -08 000000090 INF: Y Motor: Unshifted Position: 1024255
17-02-28 20:04:28.445 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:28.458 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:28.465 -08 000000031 INF: Camera #2 ReleaseBuffer
17-02-28 20:04:28.465 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:04:28.465 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:04:28.465 -08 000000034 INF: ===================Camera #0 Frame #272===================
17-02-28 20:04:28.466 -08 000000031 INF: ===================Camera TDI===================
17-02-28 20:04:28.477 -08 000000034 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:04:28.478 -08 000000034 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:28.501 -08 000000031 INF: ======================================
17-02-28 20:04:28.532 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:28.593 -08 000000044 INF: FPGA: Recv EX1MV
17-02-28 20:04:28.593 -08 000000044 INF: FPGA: Recv EX2MV
17-02-28 20:04:28.593 -08 000000069 INF: Excitation Filter 1: Moved 107 steps in 370.4445 ms
17-02-28 20:04:28.593 -08 000000069 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.5494 ms
17-02-28 20:04:28.593 -08 000000069 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.6232 ms
17-02-28 20:04:28.593 -08 000000069 INF: ======================================
17-02-28 20:04:28.594 -08 000000078 INF: Excitation Filter 2: Moved 107 steps in 370.3411 ms
17-02-28 20:04:28.594 -08 000000078 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.4471 ms
17-02-28 20:04:28.594 -08 000000078 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.5272 ms
17-02-28 20:04:28.594 -08 000000078 INF: ======================================
17-02-28 20:04:28.595 -08 000000090 INF: Y Motor: Unshifted Position: 990650
17-02-28 20:04:28.595 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:28.595 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:28.596 -08 000000095 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:28.597 -08 000000095 INF: ======================================
17-02-28 20:04:28.645 -08 000000034 INF: Camera #0 ReleaseBuffer
17-02-28 20:04:28.645 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:04:28.660 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:04:28.660 -08 000000090 INF: Y Motor: Moved to 14.9065 after 7863 ms
17-02-28 20:04:28.660 -08 000000090 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:28.680 -08 000000034 INF: ======================================
17-02-28 20:04:28.681 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:04:28.683 -08 000000032 INF: ======================================
17-02-28 20:04:28.722 -08 000000090 INF: Y Motor: Recv v 4097\r
17-02-28 20:04:28.722 -08 000000090 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:28.722 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:28.782 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:28.784 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:04:28.784 -08 000000090 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:28.784 -08 000000090 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:28.845 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:28.846 -08 000000090 INF: Y Motor: Recv v 134217728\r
17-02-28 20:04:28.846 -08 000000090 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:04:28.846 -08 000000090 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:28.846 -08 000000090 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:28.908 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:04:28.908 -08 000000090 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:28.908 -08 000000090 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:28.908 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:28.970 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:04:28.970 -08 000000090 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:28.970 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:29.032 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:04:29.032 -08 000000090 INF: ======================================
17-02-28 20:04:29.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:29.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:29.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.035 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:04:29.095 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:29.096 -08 000000051 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:04:29.096 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:29.155 -08 000000100 INF: FPGA: Recv TDIYERD 1490649
17-02-28 20:04:29.155 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:04:29.156 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:29.217 -08 000000065 INF: FPGA: Recv ZADCR 34937
17-02-28 20:04:29.217 -08 000000042 INF: At scan end Y pos = 14.906 and Z pos = -0.134. Y moved -48.539 mm
17-02-28 20:04:29.217 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:04:29.282 -08 000000032 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:04:29.282 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:04:29.282 -08 000000042 INF: TDIScan finished after 11834.7399 ms
17-02-28 20:04:29.282 -08 000000042 INF: Image[0]: Y should trigger at 63.446 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:04:29.282 -08 000000042 INF: Image[2]: Y should trigger at 63.446 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:04:29.283 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.313 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.624 um
17-02-28 20:04:29.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.314 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:04:29.344 -08 000000069 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:04:29.344 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.345 -08 000000034 INF: ===================Dither Clean Up Command===================
17-02-28 20:04:29.345 -08 000000099 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:04:29.345 -08 000000045 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:04:29.345 -08 000000067 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:04:29.345 -08 000000067 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:04:29.345 -08 000000099 INF: ======================================
17-02-28 20:04:29.345 -08 000000067 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:04:29.346 -08 000000045 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:29.346 -08 000000045 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:29.346 -08 000000068 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:04:29.346 -08 000000094 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:04:29.346 -08 000000094 INF: ======================================
17-02-28 20:04:29.347 -08 000000068 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:04:29.406 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:29.407 -08 000000100 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:29.407 -08 000000100 INF: FPGA: Recv ZSEL 
17-02-28 20:04:29.407 -08 000000068 INF: FPGA: Xmit ZDACW 40228\n
17-02-28 20:04:29.407 -08 000000067 INF: ======================================
17-02-28 20:04:29.408 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:04:29.408 -08 000000045 INF: ======================================
17-02-28 20:04:29.468 -08 000000031 INF: FPGA: Recv ZDACW 
17-02-28 20:04:29.469 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:29.469 -08 000000068 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:04:29.469 -08 000000068 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:04:29.530 -08 000000039 INF: FPGA: Recv TDIBB
17-02-28 20:04:29.530 -08 000000068 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:04:29.531 -08 000000068 INF: ======================================
17-02-28 20:04:29.532 -08 000000034 INF: ======================================
17-02-28 20:04:29.533 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.534 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:04:29.534 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.534 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:04:29.534 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.534 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:04:29.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:04:29.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:04:29.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:04:29.536 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Dispensing port PortC, Waiting for image analysis===================
17-02-28 20:04:29.536 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Dispensing port PortC===================
17-02-28 20:04:29.536 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:04:29.536 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:04:29.559 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:04:29.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:29.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:04:29.560 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:29.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:04:29.560 -08 000000042 INF: Transformed XStagePosition from 75.26964 mm to 75.24617806077 mm.
17-02-28 20:04:29.560 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:04:29.641 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5551593553983 mm.
17-02-28 20:04:29.641 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3551593553983 mm.
17-02-28 20:04:29.641 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4459093553983 mm.
17-02-28 20:04:29.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:04:29.645 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:29.645 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -153.5 um, section = C_1
17-02-28 20:04:29.648 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:29.649 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:29.652 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:04:29.652 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:29.653 -08 000000029 INF: ===================MoveEmissionFilters===================
17-02-28 20:04:29.653 -08 000000038 INF: ===================Move X,Y, Parallel===================
17-02-28 20:04:29.654 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:04:29.654 -08 000000059 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:04:29.684 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:29.689 -08 000000063 INF: ===================Move X Motor without settling===================
17-02-28 20:04:29.690 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:04:29.690 -08 000000063 INF: X Motor: Xmit PR VM\n
17-02-28 20:04:29.703 -08 000000057 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:29.705 -08 000000057 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:29.707 -08 000000004 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:29.707 -08 000000004 INF: Y Motor: Moving to 64.5552 mm @25.000 mm/sec, started at 14.9065 mm
17-02-28 20:04:29.707 -08 000000004 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:29.707 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:29.708 -08 000000004 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:29.708 -08 000000064 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:04:29.708 -08 000000073 INF: ===================TDI Scan Setup===================
17-02-28 20:04:29.708 -08 000000037 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:04:29.709 -08 000000064 INF: ======================================
17-02-28 20:04:29.709 -08 000000037 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:04:29.709 -08 000000037 INF: ======================================
17-02-28 20:04:29.709 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:29.710 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:29.710 -08 000000073 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:29.710 -08 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:29.711 -08 000000037 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:04:29.711 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:29.712 -08 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:29.712 -08 000000067 INF: ===================Camera Arm TDI===================
17-02-28 20:04:29.712 -08 000000037 INF: ======================================
17-02-28 20:04:29.712 -08 000000073 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:04:29.713 -08 000000064 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:04:29.713 -08 000000073 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:29.714 -08 000000064 INF: ======================================
17-02-28 20:04:29.714 -08 000000037 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:04:29.714 -08 000000073 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:04:29.714 -08 000000037 INF: ======================================
17-02-28 20:04:29.715 -08 000000057 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:29.715 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:29.716 -08 000000069 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:04:29.716 -08 000000051 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:04:29.717 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:29.717 -08 000000051 INF: ======================================
17-02-28 20:04:29.717 -08 000000037 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:04:29.718 -08 000000069 INF: ======================================
17-02-28 20:04:29.718 -08 000000067 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:29.718 -08 000000025 INF: ======================================
17-02-28 20:04:29.718 -08 000000037 INF: ======================================
17-02-28 20:04:29.719 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:29.719 -08 000000057 INF: ======================================
17-02-28 20:04:29.719 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:29.720 -08 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:29.720 -08 000000098 INF: ======================================
17-02-28 20:04:29.722 -08 000000033 INF: ======================================
17-02-28 20:04:29.722 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1102 Request: {"Cycle":2,"Lane":3,"Tile":1102,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF184","HCSMMF257","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.724 -08 000000029 INF: ======================================
17-02-28 20:04:29.759 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1101 Request: {"Cycle":2,"Lane":3,"Tile":1101,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF252","HCSMMF275","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.765 -08 000000090 INF: FPGA: Recv ZSEL 
17-02-28 20:04:29.766 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:29.767 -08 000000004 INF: Y Motor: Recv ok\r
17-02-28 20:04:29.767 -08 000000004 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:29.767 -08 000000004 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:29.767 -08 000000073 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:29.767 -08 000000063 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:04:29.767 -08 000000063 INF: X Motor: Xmit PR VI\n
17-02-28 20:04:29.767 -08 000000073 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:04:29.769 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1110 Request: {"Cycle":2,"Lane":3,"Tile":1110,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF189","HCSMMF231","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.833 -08 000000045 INF: FPGA: Recv TDIBB
17-02-28 20:04:29.833 -08 000000073 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:29.834 -08 000000063 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:04:29.834 -08 000000004 INF: Y Motor: Recv ok\r
17-02-28 20:04:29.834 -08 000000004 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:29.834 -08 000000063 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:04:29.834 -08 000000063 INF: X Motor: Moving to 75.2462 mm @15.000 mm/sec, started at 74.1465 mm
17-02-28 20:04:29.834 -08 000000063 INF: X Motor: Xmit MA 6654\n
17-02-28 20:04:29.835 -08 000000073 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:04:29.835 -08 000000073 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:29.837 -08 000000073 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:04:29.837 -08 000000073 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:04:29.837 -08 000000073 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:04:29.871 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1109 Request: {"Cycle":2,"Lane":3,"Tile":1109,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF200","HCSMMF223","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.872 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1103 Request: {"Cycle":2,"Lane":3,"Tile":1103,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF192","HCSMMF246","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.873 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1105 Request: {"Cycle":2,"Lane":3,"Tile":1105,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF224","HCSMMF280","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.873 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1108 Request: {"Cycle":2,"Lane":3,"Tile":1108,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF251","HCSMMF176","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.874 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1104 Request: {"Cycle":2,"Lane":3,"Tile":1104,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF218","HCSMMF216","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.875 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1107 Request: {"Cycle":2,"Lane":3,"Tile":1107,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF235","HCSMMF268","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.875 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1106 Request: {"Cycle":2,"Lane":3,"Tile":1106,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF253","HCSMMF190","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.876 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1111 Request: {"Cycle":2,"Lane":3,"Tile":1111,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF220","HCSMMF256","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.877 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1112 Request: {"Cycle":2,"Lane":3,"Tile":1112,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF267","HCSMMF178","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.877 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1113 Request: {"Cycle":2,"Lane":3,"Tile":1113,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF217","HCSMMF261","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.878 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1116 Request: {"Cycle":2,"Lane":3,"Tile":1116,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF188","HCSMMF240","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.879 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1114 Request: {"Cycle":2,"Lane":3,"Tile":1114,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF258","HCSMMF265","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.879 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1115 Request: {"Cycle":2,"Lane":3,"Tile":1115,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF182","HCSMMF281","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.880 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1121 Request: {"Cycle":2,"Lane":3,"Tile":1121,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF222","HCSMMF278","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.882 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1122 Request: {"Cycle":2,"Lane":3,"Tile":1122,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF198","HCSMMF206","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.882 -08 000000097 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1117 Request: {"Cycle":2,"Lane":3,"Tile":1117,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF210","HCSMMF245","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.883 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1124 Request: {"Cycle":2,"Lane":3,"Tile":1124,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF202","HCSMMF273","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.884 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1125 Request: {"Cycle":2,"Lane":3,"Tile":1125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF215","HCSMMF264","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.885 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1119 Request: {"Cycle":2,"Lane":3,"Tile":1119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF187","HCSMMF254","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.885 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1127 Request: {"Cycle":2,"Lane":3,"Tile":1127,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF284","HCSMMF233","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.886 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1126 Request: {"Cycle":2,"Lane":3,"Tile":1126,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF277","HCSMMF285","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.888 -08 000000077 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:29.888 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1123 Request: {"Cycle":2,"Lane":3,"Tile":1123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF185","HCSMMF213","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.888 -08 000000073 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:29.889 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1118 Request: {"Cycle":2,"Lane":3,"Tile":1118,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF266","HCSMMF209","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.890 -08 000000004 INF: Y Motor: Recv v 0\r
17-02-28 20:04:29.890 -08 000000063 INF: X Motor: Recv MA 6654\r\n>
17-02-28 20:04:29.890 -08 000000004 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:29.890 -08 000000073 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:04:29.890 -08 000000004 INF: Y Motor: Set target position to 5955516 encoder counts
17-02-28 20:04:29.890 -08 000000004 INF: Y Motor: Xmit s r0xca 5955516\r
17-02-28 20:04:29.890 -08 000000073 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:29.891 -08 000000063 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:04:29.892 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1128 Request: {"Cycle":2,"Lane":3,"Tile":1128,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF194","HCSMMF239","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.892 -08 000000073 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:04:29.892 -08 000000073 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:04:29.892 -08 000000073 INF: Z Motor: Arming to move to -0.1135 mm
17-02-28 20:04:29.893 -08 000000073 INF: FPGA: Xmit ZYT 6435516 4\n
17-02-28 20:04:29.893 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1120 Request: {"Cycle":2,"Lane":3,"Tile":1120,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF230","HCSMMF248","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:29.895 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:29.901 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:04:29.954 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:04:29.954 -08 000000073 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490650 enc / 14.907 mm / ) = 6435516 enc / 64.355 mm
17-02-28 20:04:29.954 -08 000000073 INF: FPGA: Xmit ZARM 29743\n
17-02-28 20:04:29.956 -08 000000004 INF: Y Motor: Recv ok\r
17-02-28 20:04:29.956 -08 000000004 INF: Y Motor: Start the move command
17-02-28 20:04:29.956 -08 000000004 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:29.975 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:29.975 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:04:30.016 -08 000000039 INF: FPGA: Recv ZARM
17-02-28 20:04:30.016 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:30.016 -08 000000073 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.4227 ms
17-02-28 20:04:30.016 -08 000000073 INF: Z Motor: ArmAbsStepped took 123.2198 ms
17-02-28 20:04:30.016 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:30.016 -08 000000073 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:30.017 -08 000000004 INF: Y Motor: Recv ok\r
17-02-28 20:04:30.017 -08 000000004 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:04:30.017 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.017 -08 000000073 INF: ===================TDI Scan Setup===================
17-02-28 20:04:30.019 -08 000000073 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:04:30.022 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:04:30.022 -08 000000073 INF: ===================TDI Scan Setup===================
17-02-28 20:04:30.024 -08 000000073 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:04:30.024 -08 000000073 INF: ===================TDI Scan Setup===================
17-02-28 20:04:30.025 -08 000000073 INF: ======================================
17-02-28 20:04:30.077 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:30.107 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:30.113 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:04:30.142 -08 000000004 INF: Y Motor: Unshifted Position: 1067817
17-02-28 20:04:30.192 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.207 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:30.213 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:04:30.304 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:30.317 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.326 -08 000000067 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:04:30.326 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:04:30.326 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:30.327 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:30.341 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:30.343 -08 000000067 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:30.389 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:30.389 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:04:30.389 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:04:30.452 -08 000000004 INF: Y Motor: Unshifted Position: 1772321
17-02-28 20:04:30.502 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.515 -08 000000063 INF: X Motor: Xmit PR ER\n
17-02-28 20:04:30.576 -08 000000063 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:04:30.576 -08 000000063 INF: X Motor: Moved to 75.2451 after 685 ms
17-02-28 20:04:30.576 -08 000000063 INF: ======================================
17-02-28 20:04:30.589 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:04:30.627 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.765 -08 000000004 INF: Y Motor: Unshifted Position: 2554834
17-02-28 20:04:30.815 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.941 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:30.943 -08 000000067 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:04:30.943 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:04:30.943 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:30.958 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:30.960 -08 000000067 INF: ===================Camera Arm TDI===================
17-02-28 20:04:30.961 -08 000000067 INF: ======================================
17-02-28 20:04:30.962 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:30.963 -08 000000059 INF: ======================================
17-02-28 20:04:31.078 -08 000000004 INF: Y Motor: Unshifted Position: 3330616
17-02-28 20:04:31.128 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:31.253 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:31.389 -08 000000004 INF: Y Motor: Unshifted Position: 4113184
17-02-28 20:04:31.439 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:31.489 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:04:31.562 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:31.576 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:31.676 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:31.701 -08 000000004 INF: Y Motor: Unshifted Position: 4896452
17-02-28 20:04:31.751 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:31.764 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:31.875 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:32.012 -08 000000004 INF: Y Motor: Unshifted Position: 5670674
17-02-28 20:04:32.014 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:32.062 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:32.073 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:32.073 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:32.073 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-02-28 20:04:32.186 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:32.325 -08 000000004 INF: Y Motor: Unshifted Position: 5955519
17-02-28 20:04:32.375 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:32.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:32.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:32.446 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:32.446 -08 000000018 INF: WaitCommand(10000) start
17-02-28 20:04:32.446 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 10 of 10 seconds left===================
17-02-28 20:04:32.511 -08 000000004 INF: Y Motor: Unshifted Position: 5955517
17-02-28 20:04:32.511 -08 000000004 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:32.511 -08 000000004 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:32.573 -08 000000004 INF: Y Motor: Recv v 0\r
17-02-28 20:04:32.573 -08 000000004 INF: Y Motor: Moved to 64.5552 after 2556 ms
17-02-28 20:04:32.573 -08 000000004 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:32.640 -08 000000004 INF: Y Motor: Recv v 4096\r
17-02-28 20:04:32.640 -08 000000004 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:32.640 -08 000000004 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:32.700 -08 000000004 INF: Y Motor: Recv v 0\r
17-02-28 20:04:32.700 -08 000000004 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:32.700 -08 000000004 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:32.762 -08 000000004 INF: Y Motor: Recv v 402653184\r
17-02-28 20:04:32.762 -08 000000004 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:04:32.762 -08 000000004 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:32.762 -08 000000004 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:32.824 -08 000000004 INF: Y Motor: Recv v 0\r
17-02-28 20:04:32.824 -08 000000004 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:32.824 -08 000000004 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:32.824 -08 000000004 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:32.886 -08 000000004 INF: Y Motor: Recv ok\r
17-02-28 20:04:32.886 -08 000000004 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:32.886 -08 000000004 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:32.948 -08 000000004 INF: Y Motor: Recv ok\r
17-02-28 20:04:32.948 -08 000000004 INF: ======================================
17-02-28 20:04:32.949 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:04:32.950 -08 000000038 INF: ======================================
17-02-28 20:04:32.951 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:32.952 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:32.952 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:04:32.952 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:04:33.011 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:33.011 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:04:33.071 -08 000000073 INF: FPGA: Recv ZFREQCL
17-02-28 20:04:33.071 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:04:33.071 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:33.072 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:33.133 -08 000000094 INF: FPGA: Recv TDIYERD 6455518
17-02-28 20:04:33.133 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455518 counts (64.555 mm)
17-02-28 20:04:33.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:33.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:33.135 -08 000000038 INF: ===================TDI FPGA Arm===================
17-02-28 20:04:33.135 -08 000000031 INF: ===================Set YMotor gains for scans===================
17-02-28 20:04:33.136 -08 000000031 INF: ======================================
17-02-28 20:04:33.136 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:33.137 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:04:33.137 -08 000000038 INF: FPGA: Xmit TDIYPOS 6344591\n
17-02-28 20:04:33.195 -08 000000045 INF: FPGA: Recv TDIYPOS
17-02-28 20:04:33.195 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:33.197 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:04:33.197 -08 000000038 INF: FPGA: Xmit TDIYARM3 139264 6435516 1 1\n
17-02-28 20:04:33.260 -08 000000069 INF: FPGA: Recv TDIYARM3
17-02-28 20:04:33.260 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:33.261 -08 000000038 INF: ===================TDI FPGA Arm===================
17-02-28 20:04:33.262 -08 000000038 INF: ======================================
17-02-28 20:04:33.263 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:33.264 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:33.264 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:33.265 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:33.265 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:33.266 -08 000000077 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:04:33.266 -08 000000034 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:04:33.266 -08 000000077 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:04:33.266 -08 000000077 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:04:33.266 -08 000000077 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:04:33.266 -08 000000034 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:04:33.266 -08 000000077 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:04:33.267 -08 000000034 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:04:33.267 -08 000000034 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:04:33.269 -08 000000034 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:04:33.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:33.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 9 of 10 seconds left===================
17-02-28 20:04:33.632 -08 000000063 INF: FPGA: Recv EX2MV
17-02-28 20:04:33.632 -08 000000063 INF: FPGA: Recv EX1MV
17-02-28 20:04:33.632 -08 000000034 INF: Excitation Filter 1: Moved -107 steps in 365.4651 ms
17-02-28 20:04:33.632 -08 000000077 INF: Excitation Filter 2: Moved -107 steps in 365.6544 ms
17-02-28 20:04:33.632 -08 000000034 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.6795 ms
17-02-28 20:04:33.632 -08 000000034 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.7696 ms
17-02-28 20:04:33.632 -08 000000077 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.8069 ms
17-02-28 20:04:33.632 -08 000000077 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.9821 ms
17-02-28 20:04:33.633 -08 000000034 INF: ======================================
17-02-28 20:04:33.633 -08 000000077 INF: ======================================
17-02-28 20:04:33.634 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:33.635 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:33.636 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:04:33.636 -08 000000090 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:33.636 -08 000000073 INF: ===================FPGA Z Wait===================
17-02-28 20:04:33.636 -08 000000031 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:33.636 -08 000000073 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:04:33.636 -08 000000031 INF: Y Motor: Moving to 14.9068 mm @6.500 mm/sec, started at 64.5552 mm
17-02-28 20:04:33.636 -08 000000095 INF: ===================Camera TDI, Parallel===================
17-02-28 20:04:33.637 -08 000000090 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:04:33.637 -08 000000031 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:33.637 -08 000000031 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:33.637 -08 000000090 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:04:33.638 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:04:33.638 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:04:33.639 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:33.639 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:33.640 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:33.640 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:33.697 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:33.697 -08 000000031 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:33.697 -08 000000031 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:33.761 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:33.761 -08 000000031 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:33.790 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:33.790 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:33.790 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:33.790 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:33.823 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:04:33.823 -08 000000031 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:33.823 -08 000000031 INF: Y Motor: Set target position to 990682 encoder counts
17-02-28 20:04:33.823 -08 000000031 INF: Y Motor: Xmit s r0xca 990682\r
17-02-28 20:04:33.885 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:33.885 -08 000000031 INF: Y Motor: Start the move command
17-02-28 20:04:33.885 -08 000000031 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:33.940 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:33.940 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:33.940 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:33.940 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:33.947 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:33.947 -08 000000031 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:04:33.947 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.007 -08 000000077 INF: FPGA: Recv ZWAIT 
17-02-28 20:04:34.007 -08 000000073 INF: ======================================
17-02-28 20:04:34.071 -08 000000031 INF: Y Motor: Unshifted Position: 5892364
17-02-28 20:04:34.090 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:34.090 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:34.090 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:34.090 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:34.090 -08 000000032 INF: ===================Camera #2 Frame #5===================
17-02-28 20:04:34.090 -08 000000100 INF: ===================Camera #0 Frame #5===================
17-02-28 20:04:34.121 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.248 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.255 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:04:34.255 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:04:34.255 -08 000000100 INF: ===================Camera #0 Frame #11===================
17-02-28 20:04:34.256 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:04:34.256 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:04:34.256 -08 000000032 INF: ===================Camera #2 Frame #11===================
17-02-28 20:04:34.384 -08 000000031 INF: Y Motor: Unshifted Position: 5689998
17-02-28 20:04:34.423 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:04:34.423 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:04:34.423 -08 000000100 INF: ===================Camera #0 Frame #17===================
17-02-28 20:04:34.425 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:04:34.425 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:04:34.425 -08 000000032 INF: ===================Camera #2 Frame #17===================
17-02-28 20:04:34.434 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:34.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 8 of 10 seconds left===================
17-02-28 20:04:34.558 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.591 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:34.591 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:34.591 -08 000000100 INF: ===================Camera #0 Frame #23===================
17-02-28 20:04:34.594 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:34.594 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:34.594 -08 000000032 INF: ===================Camera #2 Frame #23===================
17-02-28 20:04:34.697 -08 000000031 INF: Y Motor: Unshifted Position: 5487854
17-02-28 20:04:34.747 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.760 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:04:34.760 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:04:34.760 -08 000000100 INF: ===================Camera #0 Frame #29===================
17-02-28 20:04:34.763 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:04:34.763 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:04:34.763 -08 000000032 INF: ===================Camera #2 Frame #29===================
17-02-28 20:04:34.871 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:34.928 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:04:34.928 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:04:34.928 -08 000000100 INF: ===================Camera #0 Frame #35===================
17-02-28 20:04:34.932 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:04:34.932 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:04:34.932 -08 000000032 INF: ===================Camera #2 Frame #36===================
17-02-28 20:04:35.007 -08 000000031 INF: Y Motor: Unshifted Position: 5285050
17-02-28 20:04:35.057 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:35.096 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:04:35.096 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:04:35.096 -08 000000100 INF: ===================Camera #0 Frame #42===================
17-02-28 20:04:35.104 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:04:35.104 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:04:35.104 -08 000000032 INF: ===================Camera #2 Frame #42===================
17-02-28 20:04:35.185 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:35.270 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:04:35.270 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:04:35.270 -08 000000100 INF: ===================Camera #0 Frame #48===================
17-02-28 20:04:35.275 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:04:35.275 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:04:35.275 -08 000000032 INF: ===================Camera #2 Frame #48===================
17-02-28 20:04:35.319 -08 000000031 INF: Y Motor: Unshifted Position: 5080725
17-02-28 20:04:35.369 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:35.440 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:04:35.440 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:04:35.440 -08 000000100 INF: ===================Camera #0 Frame #54===================
17-02-28 20:04:35.446 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:04:35.446 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:04:35.446 -08 000000032 INF: ===================Camera #2 Frame #54===================
17-02-28 20:04:35.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:35.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 7 of 10 seconds left===================
17-02-28 20:04:35.493 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:35.610 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:04:35.610 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:04:35.610 -08 000000100 INF: ===================Camera #0 Frame #60===================
17-02-28 20:04:35.616 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:04:35.616 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:04:35.616 -08 000000032 INF: ===================Camera #2 Frame #61===================
17-02-28 20:04:35.632 -08 000000031 INF: Y Motor: Unshifted Position: 4878363
17-02-28 20:04:35.682 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:35.778 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:04:35.778 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:04:35.778 -08 000000100 INF: ===================Camera #0 Frame #67===================
17-02-28 20:04:35.789 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:04:35.789 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:04:35.789 -08 000000032 INF: ===================Camera #2 Frame #67===================
17-02-28 20:04:35.806 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:35.945 -08 000000031 INF: Y Motor: Unshifted Position: 4676864
17-02-28 20:04:35.951 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:04:35.951 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:04:35.951 -08 000000100 INF: ===================Camera #0 Frame #73===================
17-02-28 20:04:35.960 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:04:35.961 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:04:35.961 -08 000000032 INF: ===================Camera #2 Frame #73===================
17-02-28 20:04:35.995 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.117 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.121 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:04:36.121 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:04:36.121 -08 000000100 INF: ===================Camera #0 Frame #79===================
17-02-28 20:04:36.132 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:04:36.132 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:04:36.132 -08 000000032 INF: ===================Camera #2 Frame #80===================
17-02-28 20:04:36.257 -08 000000031 INF: Y Motor: Unshifted Position: 4472535
17-02-28 20:04:36.292 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:04:36.292 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:04:36.292 -08 000000100 INF: ===================Camera #0 Frame #86===================
17-02-28 20:04:36.307 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.307 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:04:36.307 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:04:36.307 -08 000000032 INF: ===================Camera #2 Frame #86===================
17-02-28 20:04:36.431 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:36.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left===================
17-02-28 20:04:36.465 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:04:36.465 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:04:36.465 -08 000000100 INF: ===================Camera #0 Frame #92===================
17-02-28 20:04:36.478 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:04:36.478 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:04:36.478 -08 000000032 INF: ===================Camera #2 Frame #92===================
17-02-28 20:04:36.570 -08 000000031 INF: Y Motor: Unshifted Position: 4271040
17-02-28 20:04:36.620 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.635 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:04:36.635 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:04:36.635 -08 000000100 INF: ===================Camera #0 Frame #98===================
17-02-28 20:04:36.649 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:04:36.649 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:04:36.649 -08 000000032 INF: ===================Camera #2 Frame #99===================
17-02-28 20:04:36.744 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.804 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:04:36.804 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:04:36.804 -08 000000100 INF: ===================Camera #0 Frame #104===================
17-02-28 20:04:36.823 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:04:36.823 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:04:36.823 -08 000000032 INF: ===================Camera #2 Frame #105===================
17-02-28 20:04:36.880 -08 000000031 INF: Y Motor: Unshifted Position: 4067365
17-02-28 20:04:36.930 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:36.974 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:04:36.974 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:04:36.974 -08 000000100 INF: ===================Camera #0 Frame #111===================
17-02-28 20:04:36.994 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:04:36.994 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:04:36.994 -08 000000032 INF: ===================Camera #2 Frame #111===================
17-02-28 20:04:37.055 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:37.147 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:04:37.147 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:04:37.147 -08 000000100 INF: ===================Camera #0 Frame #117===================
17-02-28 20:04:37.165 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:04:37.165 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:04:37.165 -08 000000032 INF: ===================Camera #2 Frame #118===================
17-02-28 20:04:37.194 -08 000000031 INF: Y Motor: Unshifted Position: 3863917
17-02-28 20:04:37.244 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:37.317 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:04:37.317 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:04:37.317 -08 000000100 INF: ===================Camera #0 Frame #123===================
17-02-28 20:04:37.339 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:04:37.339 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:04:37.339 -08 000000032 INF: ===================Camera #2 Frame #124===================
17-02-28 20:04:37.368 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:37.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:37.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 5 of 10 seconds left===================
17-02-28 20:04:37.487 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:04:37.487 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:04:37.487 -08 000000100 INF: ===================Camera #0 Frame #130===================
17-02-28 20:04:37.504 -08 000000031 INF: Y Motor: Unshifted Position: 3661547
17-02-28 20:04:37.510 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:04:37.510 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:04:37.510 -08 000000032 INF: ===================Camera #2 Frame #130===================
17-02-28 20:04:37.554 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:37.660 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:04:37.660 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:04:37.660 -08 000000100 INF: ===================Camera #0 Frame #136===================
17-02-28 20:04:37.678 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:37.681 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:04:37.681 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:04:37.681 -08 000000032 INF: ===================Camera #2 Frame #137===================
17-02-28 20:04:37.817 -08 000000031 INF: Y Motor: Unshifted Position: 3458101
17-02-28 20:04:37.830 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:04:37.830 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:04:37.830 -08 000000100 INF: ===================Camera #0 Frame #142===================
17-02-28 20:04:37.855 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:04:37.855 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:04:37.855 -08 000000032 INF: ===================Camera #2 Frame #143===================
17-02-28 20:04:37.867 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:37.991 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:38.000 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:04:38.000 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:04:38.000 -08 000000100 INF: ===================Camera #0 Frame #148===================
17-02-28 20:04:38.026 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:04:38.026 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:04:38.026 -08 000000032 INF: ===================Camera #2 Frame #149===================
17-02-28 20:04:38.131 -08 000000031 INF: Y Motor: Unshifted Position: 3256388
17-02-28 20:04:38.170 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:04:38.170 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:04:38.170 -08 000000100 INF: ===================Camera #0 Frame #155===================
17-02-28 20:04:38.181 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:38.197 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:04:38.197 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:04:38.197 -08 000000032 INF: ===================Camera #2 Frame #156===================
17-02-28 20:04:38.304 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:38.344 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:04:38.344 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:04:38.344 -08 000000100 INF: ===================Camera #0 Frame #161===================
17-02-28 20:04:38.372 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:04:38.372 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:04:38.372 -08 000000032 INF: ===================Camera #2 Frame #162===================
17-02-28 20:04:38.440 -08 000000031 INF: Y Motor: Unshifted Position: 3052939
17-02-28 20:04:38.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:38.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 4 of 10 seconds left===================
17-02-28 20:04:38.490 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:38.514 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:04:38.514 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:04:38.514 -08 000000100 INF: ===================Camera #0 Frame #167===================
17-02-28 20:04:38.542 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:04:38.542 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:04:38.542 -08 000000032 INF: ===================Camera #2 Frame #168===================
17-02-28 20:04:38.614 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:38.684 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:04:38.684 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:04:38.684 -08 000000100 INF: ===================Camera #0 Frame #174===================
17-02-28 20:04:38.713 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:04:38.713 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:04:38.713 -08 000000032 INF: ===================Camera #2 Frame #175===================
17-02-28 20:04:38.753 -08 000000031 INF: Y Motor: Unshifted Position: 2849278
17-02-28 20:04:38.803 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:38.857 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:04:38.857 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:04:38.857 -08 000000100 INF: ===================Camera #0 Frame #180===================
17-02-28 20:04:38.887 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:04:38.887 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:04:38.887 -08 000000032 INF: ===================Camera #2 Frame #181===================
17-02-28 20:04:38.928 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.027 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:04:39.027 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:04:39.027 -08 000000100 INF: ===================Camera #0 Frame #186===================
17-02-28 20:04:39.058 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:04:39.058 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:04:39.058 -08 000000032 INF: ===================Camera #2 Frame #187===================
17-02-28 20:04:39.063 -08 000000031 INF: Y Motor: Unshifted Position: 2647776
17-02-28 20:04:39.113 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.197 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:04:39.197 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:04:39.197 -08 000000100 INF: ===================Camera #0 Frame #193===================
17-02-28 20:04:39.229 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:04:39.229 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:04:39.229 -08 000000032 INF: ===================Camera #2 Frame #194===================
17-02-28 20:04:39.240 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.370 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:04:39.370 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:04:39.370 -08 000000100 INF: ===================Camera #0 Frame #199===================
17-02-28 20:04:39.376 -08 000000031 INF: Y Motor: Unshifted Position: 2444118
17-02-28 20:04:39.403 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:04:39.403 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:04:39.403 -08 000000032 INF: ===================Camera #2 Frame #200===================
17-02-28 20:04:39.426 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:39.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 3 of 10 seconds left===================
17-02-28 20:04:39.540 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:04:39.540 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:04:39.540 -08 000000100 INF: ===================Camera #0 Frame #205===================
17-02-28 20:04:39.550 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.574 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:04:39.574 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:04:39.574 -08 000000032 INF: ===================Camera #2 Frame #206===================
17-02-28 20:04:39.689 -08 000000031 INF: Y Motor: Unshifted Position: 2240663
17-02-28 20:04:39.710 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:04:39.710 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:04:39.710 -08 000000100 INF: ===================Camera #0 Frame #211===================
17-02-28 20:04:39.739 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.745 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:04:39.745 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:04:39.745 -08 000000032 INF: ===================Camera #2 Frame #213===================
17-02-28 20:04:39.863 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:39.880 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:04:39.880 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:04:39.880 -08 000000100 INF: ===================Camera #0 Frame #218===================
17-02-28 20:04:39.919 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:04:39.919 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:04:39.919 -08 000000032 INF: ===================Camera #2 Frame #219===================
17-02-28 20:04:40.001 -08 000000031 INF: Y Motor: Unshifted Position: 2038952
17-02-28 20:04:40.051 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:40.053 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:04:40.053 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:04:40.053 -08 000000100 INF: ===================Camera #0 Frame #224===================
17-02-28 20:04:40.090 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:04:40.090 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:04:40.090 -08 000000032 INF: ===================Camera #2 Frame #225===================
17-02-28 20:04:40.175 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:40.223 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:04:40.223 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:04:40.223 -08 000000100 INF: ===================Camera #0 Frame #230===================
17-02-28 20:04:40.261 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:04:40.261 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:04:40.261 -08 000000032 INF: ===================Camera #2 Frame #232===================
17-02-28 20:04:40.313 -08 000000031 INF: Y Motor: Unshifted Position: 1834848
17-02-28 20:04:40.363 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:40.393 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:04:40.393 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:04:40.393 -08 000000100 INF: ===================Camera #0 Frame #237===================
17-02-28 20:04:40.436 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:04:40.436 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:04:40.436 -08 000000032 INF: ===================Camera #2 Frame #238===================
17-02-28 20:04:40.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:40.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 2 of 10 seconds left===================
17-02-28 20:04:40.487 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:40.566 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:04:40.566 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:04:40.566 -08 000000100 INF: ===================Camera #0 Frame #243===================
17-02-28 20:04:40.607 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:04:40.607 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:04:40.607 -08 000000032 INF: ===================Camera #2 Frame #244===================
17-02-28 20:04:40.623 -08 000000031 INF: Y Motor: Unshifted Position: 1633131
17-02-28 20:04:40.673 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:40.743 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:04:40.743 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:04:40.744 -08 000000100 INF: ===================Camera #0 Frame #249===================
17-02-28 20:04:40.779 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:04:40.779 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:04:40.779 -08 000000032 INF: ===================Camera #2 Frame #251===================
17-02-28 20:04:40.800 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:40.914 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:04:40.914 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:04:40.914 -08 000000100 INF: ===================Camera #0 Frame #256===================
17-02-28 20:04:40.937 -08 000000031 INF: Y Motor: Unshifted Position: 1429028
17-02-28 20:04:40.953 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:04:40.953 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:04:40.953 -08 000000032 INF: ===================Camera #2 Frame #257===================
17-02-28 20:04:40.987 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:41.087 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:04:41.087 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:04:41.087 -08 000000100 INF: ===================Camera #0 Frame #262===================
17-02-28 20:04:41.111 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:41.124 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:04:41.124 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:04:41.124 -08 000000032 INF: ===================Camera #2 Frame #263===================
17-02-28 20:04:41.247 -08 000000031 INF: Y Motor: Unshifted Position: 1227298
17-02-28 20:04:41.257 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:04:41.257 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:04:41.257 -08 000000100 INF: ===================Camera #0 Frame #268===================
17-02-28 20:04:41.295 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:04:41.295 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:04:41.295 -08 000000032 INF: ===================Camera #2 Frame #270===================
17-02-28 20:04:41.297 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:41.372 -08 000000062 INF: FPGA: Recv TDIYWAIT
17-02-28 20:04:41.372 -08 000000090 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:41.374 -08 000000090 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:04:41.375 -08 000000045 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:04:41.375 -08 000000078 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:04:41.375 -08 000000045 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:04:41.375 -08 000000045 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:04:41.375 -08 000000045 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:04:41.375 -08 000000045 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:04:41.375 -08 000000078 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:04:41.375 -08 000000078 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:04:41.375 -08 000000078 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:04:41.376 -08 000000078 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:04:41.424 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:41.427 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:04:41.427 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:04:41.427 -08 000000100 INF: ===================Camera #0 Frame #272===================
17-02-28 20:04:41.440 -08 000000100 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:04:41.441 -08 000000100 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:41.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:41.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 1 of 10 seconds left===================
17-02-28 20:04:41.560 -08 000000031 INF: Y Motor: Unshifted Position: 1023851
17-02-28 20:04:41.572 -08 000000100 INF: Camera #0 ReleaseBuffer
17-02-28 20:04:41.572 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:04:41.572 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:04:41.572 -08 000000032 INF: ===================Camera #2 Frame #272===================
17-02-28 20:04:41.572 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:04:41.579 -08 000000032 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:04:41.580 -08 000000032 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:41.603 -08 000000100 INF: ======================================
17-02-28 20:04:41.610 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:41.747 -08 000000054 INF: FPGA: Recv EX1MV
17-02-28 20:04:41.747 -08 000000054 INF: FPGA: Recv EX2MV
17-02-28 20:04:41.747 -08 000000045 INF: Excitation Filter 1: Moved 107 steps in 371.9941 ms
17-02-28 20:04:41.747 -08 000000078 INF: Excitation Filter 2: Moved 107 steps in 371.7918 ms
17-02-28 20:04:41.747 -08 000000045 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.0917 ms
17-02-28 20:04:41.747 -08 000000045 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.2359 ms
17-02-28 20:04:41.747 -08 000000078 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.9234 ms
17-02-28 20:04:41.747 -08 000000078 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.1948 ms
17-02-28 20:04:41.747 -08 000000045 INF: ======================================
17-02-28 20:04:41.747 -08 000000078 INF: ======================================
17-02-28 20:04:41.748 -08 000000032 INF: Camera #2 ReleaseBuffer
17-02-28 20:04:41.748 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:04:41.749 -08 000000090 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:41.749 -08 000000031 INF: Y Motor: Unshifted Position: 990683
17-02-28 20:04:41.749 -08 000000031 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:41.749 -08 000000031 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:41.750 -08 000000090 INF: ======================================
17-02-28 20:04:41.783 -08 000000032 INF: ======================================
17-02-28 20:04:41.784 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:04:41.785 -08 000000095 INF: ======================================
17-02-28 20:04:41.811 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:04:41.811 -08 000000031 INF: Y Motor: Moved to 14.9068 after 7863 ms
17-02-28 20:04:41.811 -08 000000031 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:41.873 -08 000000031 INF: Y Motor: Recv v 4097\r
17-02-28 20:04:41.873 -08 000000031 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:41.873 -08 000000031 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:41.935 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:04:41.935 -08 000000031 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:41.935 -08 000000031 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:41.997 -08 000000031 INF: Y Motor: Recv v 134217728\r
17-02-28 20:04:41.997 -08 000000031 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:04:41.997 -08 000000031 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:41.997 -08 000000031 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:42.059 -08 000000031 INF: Y Motor: Recv v 0\r
17-02-28 20:04:42.059 -08 000000031 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:42.059 -08 000000031 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:42.059 -08 000000031 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:42.123 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:42.123 -08 000000031 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:42.123 -08 000000031 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:42.183 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:04:42.183 -08 000000031 INF: ======================================
17-02-28 20:04:42.184 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:42.185 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:42.186 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.187 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:04:42.247 -08 000000034 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:04:42.247 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:42.306 -08 000000038 INF: FPGA: Recv TDIYERD 1490682
17-02-28 20:04:42.306 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:04:42.368 -08 000000097 INF: FPGA: Recv ZADCR 35183
17-02-28 20:04:42.368 -08 000000042 INF: At scan end Y pos = 14.907 and Z pos = -0.135. Y moved -48.539 mm
17-02-28 20:04:42.368 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:04:42.433 -08 000000040 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:04:42.433 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:04:42.433 -08 000000042 INF: TDIScan finished after 12872.2498 ms
17-02-28 20:04:42.433 -08 000000042 INF: Image[0]: Y should trigger at 63.446 mm, 2nd row was at 64.355 mm (error = 0.909 mm)
17-02-28 20:04:42.433 -08 000000042 INF: Image[2]: Y should trigger at 63.446 mm, 2nd row was at 64.355 mm (error = 0.909 mm)
17-02-28 20:04:42.435 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:42.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:42.448 -08 000000018 INF: WaitCommand(10000) end
17-02-28 20:04:42.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:42.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:04:42.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:04:42.450 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:04:42.450 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:04:42.451 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:04:42.451 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:42.469 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.715 um
17-02-28 20:04:42.469 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.470 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:04:42.495 -08 000000101 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:04:42.495 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.496 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:42.496 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB1 (4)===================
17-02-28 20:04:42.496 -08 000000018 INF: Valve A1: Go to position 4
17-02-28 20:04:42.496 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:04:42.496 -08 000000098 INF: ===================Dither Clean Up Command===================
17-02-28 20:04:42.496 -08 000000062 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:04:42.496 -08 000000039 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:04:42.496 -08 000000094 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:04:42.497 -08 000000062 INF: ======================================
17-02-28 20:04:42.497 -08 000000094 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:04:42.497 -08 000000094 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:04:42.497 -08 000000039 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:42.497 -08 000000039 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:42.497 -08 000000031 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:04:42.497 -08 000000045 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:04:42.497 -08 000000045 INF: ======================================
17-02-28 20:04:42.498 -08 000000031 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:04:42.557 -08 000000067 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:42.557 -08 000000067 INF: FPGA: Recv ZSEL 
17-02-28 20:04:42.557 -08 000000031 INF: FPGA: Xmit ZDACW 40228\n
17-02-28 20:04:42.557 -08 000000094 INF: ======================================
17-02-28 20:04:42.558 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 7\r
17-02-28 20:04:42.558 -08 000000018 INF: Valve A1: 38.219 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:04:42.558 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 7 to 4
17-02-28 20:04:42.558 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC4\r
17-02-28 20:04:42.558 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:04:42.558 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:04:42.559 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:04:42.559 -08 000000039 INF: ======================================
17-02-28 20:04:42.619 -08 000000032 INF: FPGA: Recv ZDACW 
17-02-28 20:04:42.619 -08 000000031 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:04:42.619 -08 000000031 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:04:42.681 -08 000000040 INF: FPGA: Recv TDIBB
17-02-28 20:04:42.681 -08 000000031 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:04:42.682 -08 000000031 INF: ======================================
17-02-28 20:04:42.683 -08 000000098 INF: ======================================
17-02-28 20:04:42.684 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.685 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:04:42.685 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.685 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:04:42.685 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:04:42.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:04:42.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:42.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:04:42.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:04:42.687 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB1 (4), Waiting for image analysis===================
17-02-28 20:04:42.687 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB1 (4)===================
17-02-28 20:04:42.687 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:04:42.688 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:04:42.710 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:04:42.711 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:42.711 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:42.711 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:42.711 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:04:42.712 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 3===================
17-02-28 20:04:42.712 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface===================
17-02-28 20:04:42.728 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:42.729 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:42.729 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:42.730 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:42.760 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1201 Request: {"Cycle":2,"Lane":3,"Tile":1201,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF194","HCSMMF237","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.831 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:42.832 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:42.832 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:04:42.832 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:04:42.914 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1209 Request: {"Cycle":2,"Lane":3,"Tile":1209,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF269","HCSMMF278","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.925 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1208 Request: {"Cycle":2,"Lane":3,"Tile":1208,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF206","HCSMMF224","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.931 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1203 Request: {"Cycle":2,"Lane":3,"Tile":1203,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF213","HCSMMF230","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.940 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1212 Request: {"Cycle":2,"Lane":3,"Tile":1212,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF198","HCSMMF218","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.949 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1206 Request: {"Cycle":2,"Lane":3,"Tile":1206,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF229","HCSMMF217","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.952 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1205 Request: {"Cycle":2,"Lane":3,"Tile":1205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF193","HCSMMF273","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.980 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 4\r
17-02-28 20:04:42.981 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:04:42.981 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-02-28 20:04:42.985 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1213 Request: {"Cycle":2,"Lane":3,"Tile":1213,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF195","HCSMMF254","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.989 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1211 Request: {"Cycle":2,"Lane":3,"Tile":1211,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF286","HCSMMF204","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.989 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1204 Request: {"Cycle":2,"Lane":3,"Tile":1204,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF248","HCSMMF228","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.990 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1202 Request: {"Cycle":2,"Lane":3,"Tile":1202,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF239","HCSMMF191","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.991 -08 000000004 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1207 Request: {"Cycle":2,"Lane":3,"Tile":1207,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF202","HCSMMF222","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.992 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1216 Request: {"Cycle":2,"Lane":3,"Tile":1216,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF232","HCSMMF227","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.992 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1210 Request: {"Cycle":2,"Lane":3,"Tile":1210,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF281","HCSMMF182","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.993 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1214 Request: {"Cycle":2,"Lane":3,"Tile":1214,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF235","HCSMMF251","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.994 -08 000000040 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1217 Request: {"Cycle":2,"Lane":3,"Tile":1217,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF284","HCSMMF268","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.994 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1221 Request: {"Cycle":2,"Lane":3,"Tile":1221,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF190","HCSMMF243","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.995 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1220 Request: {"Cycle":2,"Lane":3,"Tile":1220,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF271","HCSMMF178","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.997 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1226 Request: {"Cycle":2,"Lane":3,"Tile":1226,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF274","HCSMMF211","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.997 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1222 Request: {"Cycle":2,"Lane":3,"Tile":1222,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF247","HCSMMF219","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.998 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1225 Request: {"Cycle":2,"Lane":3,"Tile":1225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF253","HCSMMF200","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:42.999 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1223 Request: {"Cycle":2,"Lane":3,"Tile":1223,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF245","HCSMMF214","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.000 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1219 Request: {"Cycle":2,"Lane":3,"Tile":1219,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF180","HCSMMF246","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.001 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1224 Request: {"Cycle":2,"Lane":3,"Tile":1224,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF184","HCSMMF250","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.001 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1227 Request: {"Cycle":2,"Lane":3,"Tile":1227,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF277","HCSMMF283","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.003 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1228 Request: {"Cycle":2,"Lane":3,"Tile":1228,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF201","HCSMMF252","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.004 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1215 Request: {"Cycle":2,"Lane":3,"Tile":1215,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF176","HCSMMF264","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.006 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 2 Tile: 1218 Request: {"Cycle":2,"Lane":3,"Tile":1218,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF231","HCSMMF258","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:04:43.009 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:43.015 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:04:43.102 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:43.102 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:04:43.140 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:43.146 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:04:43.226 -08 000000080 INF: FPGA: Recv MIOCOMPR
17-02-28 20:04:43.226 -08 000000042 INF: Compensator: Moved OutOfPath in 394 ms
17-02-28 20:04:43.226 -08 000000042 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:04:43.227 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:43.228 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:43.228 -08 000000034 INF: ===================Move Tilt Motor 1===================
17-02-28 20:04:43.228 -08 000000100 INF: ===================Move Tilt Motor 3===================
17-02-28 20:04:43.228 -08 000000097 INF: ===================Move Tilt Motor 2===================
17-02-28 20:04:43.229 -08 000000034 INF: ======================================
17-02-28 20:04:43.229 -08 000000100 INF: ======================================
17-02-28 20:04:43.229 -08 000000097 INF: ======================================
17-02-28 20:04:43.230 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:43.231 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:43.235 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:43.240 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:04:43.241 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:04:43.251 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:04:43.251 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:04:43.251 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:04:43.251 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:43.252 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:43.255 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:04:43.255 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:04:43.255 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:04:43.291 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:43.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:43.292 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:04:43.292 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1535 mm
17-02-28 20:04:43.292 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:04:43.343 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:43.348 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:04:43.352 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:04:43.352 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:43.353 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:43.355 -08 000000047 INF: FPGA: Recv ZTRG 
17-02-28 20:04:43.356 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:04:43.415 -08 000000063 INF: FPGA: Recv ZYT 
17-02-28 20:04:43.415 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:04:43.415 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:04:43.416 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:43.424 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 4, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 80, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:04:43.434 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:04:43.477 -08 000000097 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:04:43.477 -08 000000097 INF: FPGA: Recv ZMV 
17-02-28 20:04:43.477 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:04:43.477 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.796 ms
17-02-28 20:04:43.477 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:04:43.516 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:04:43.541 -08 000000065 INF: FPGA: Recv ZDACR 60292
17-02-28 20:04:43.542 -08 000000042 INF: Z Motor: MoveAndTrigger took 249.8406 ms w/comms
17-02-28 20:04:43.542 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:04:43.542 -08 000000042 INF: Z Motor: MoveAbsStepped took 250.0227 ms
17-02-28 20:04:43.542 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:43.543 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:04:43.552 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:04:43.552 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:43.552 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:43.552 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:04:43.552 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:04:43.604 -08 000000039 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:43.604 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:04:43.604 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:04:43.614 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:43.614 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:04:43.623 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:04:43.623 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:43.623 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:04:43.625 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:43.625 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:04:43.626 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:43.626 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = D_1
17-02-28 20:04:43.626 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:43.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:43.627 -08 000000036 INF: ===================MoveEmissionFilters===================
17-02-28 20:04:43.627 -08 000000084 INF: ===================Move X,Y===================
17-02-28 20:04:43.628 -08 000000084 INF: ===================Move X,Y, Parallel===================
17-02-28 20:04:43.628 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:43.628 -08 000000064 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:43.628 -08 000000102 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:43.629 -08 000000093 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:43.629 -08 000000047 INF: ===================Move X Motor without settling===================
17-02-28 20:04:43.629 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:43.629 -08 000000102 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:43.629 -08 000000047 INF: X Motor: Xmit PR VM\n
17-02-28 20:04:43.629 -08 000000093 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:43.630 -08 000000033 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:43.630 -08 000000078 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:04:43.630 -08 000000070 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:04:43.630 -08 000000032 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:04:43.630 -08 000000054 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:04:43.630 -08 000000030 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:04:43.630 -08 000000063 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:04:43.630 -08 000000033 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9068 mm
17-02-28 20:04:43.630 -08 000000063 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:04:43.631 -08 000000054 INF: ======================================
17-02-28 20:04:43.631 -08 000000070 INF: ======================================
17-02-28 20:04:43.631 -08 000000033 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:43.631 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:43.632 -08 000000030 INF: ======================================
17-02-28 20:04:43.632 -08 000000064 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:43.632 -08 000000102 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:43.633 -08 000000070 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:04:43.633 -08 000000092 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:04:43.633 -08 000000092 INF: ======================================
17-02-28 20:04:43.633 -08 000000078 INF: ======================================
17-02-28 20:04:43.633 -08 000000070 INF: ======================================
17-02-28 20:04:43.634 -08 000000063 INF: ======================================
17-02-28 20:04:43.634 -08 000000102 INF: ======================================
17-02-28 20:04:43.634 -08 000000032 INF: ======================================
17-02-28 20:04:43.635 -08 000000064 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:43.635 -08 000000093 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:43.635 -08 000000067 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:43.636 -08 000000064 INF: ======================================
17-02-28 20:04:43.636 -08 000000093 INF: ======================================
17-02-28 20:04:43.637 -08 000000067 INF: ======================================
17-02-28 20:04:43.637 -08 000000036 INF: ======================================
17-02-28 20:04:43.665 -08 000000047 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:04:43.665 -08 000000047 INF: X Motor: Xmit PR VI\n
17-02-28 20:04:43.665 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:04:43.665 -08 000000033 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:43.665 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:43.704 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:04:43.722 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:04:43.731 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:04:43.731 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:43.731 -08 000000047 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:04:43.731 -08 000000047 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:04:43.731 -08 000000047 INF: X Motor: Moving to 77.4806 mm @15.000 mm/sec, started at 75.2451 mm
17-02-28 20:04:43.731 -08 000000047 INF: X Motor: Xmit MA 7570\n
17-02-28 20:04:43.789 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:43.790 -08 000000047 INF: X Motor: Recv MA 7570\r\n>
17-02-28 20:04:43.790 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:04:43.790 -08 000000033 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:43.790 -08 000000047 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:04:43.790 -08 000000033 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:04:43.790 -08 000000033 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:04:43.852 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:04:43.852 -08 000000033 INF: Y Motor: Start the move command
17-02-28 20:04:43.852 -08 000000033 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:43.889 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:43.916 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:43.917 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:04:43.917 -08 000000033 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:04:43.917 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.042 -08 000000033 INF: Y Motor: Unshifted Position: 1075662
17-02-28 20:04:44.092 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.166 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:44.215 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.226 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:44.326 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:04:44.355 -08 000000033 INF: Y Motor: Unshifted Position: 1779847
17-02-28 20:04:44.405 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.414 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:44.414 -08 000000047 INF: X Motor: Xmit PR ER\n
17-02-28 20:04:44.476 -08 000000047 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:04:44.476 -08 000000047 INF: X Motor: Moved to 77.4814 after 686 ms
17-02-28 20:04:44.476 -08 000000047 INF: ======================================
17-02-28 20:04:44.514 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:44.526 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.540 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:44.540 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB===================
17-02-28 20:04:44.640 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP15360R\r
17-02-28 20:04:44.667 -08 000000033 INF: Y Motor: Unshifted Position: 2559868
17-02-28 20:04:44.717 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.727 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:44.827 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:44.841 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:44.914 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:44.977 -08 000000033 INF: Y Motor: Unshifted Position: 3345635
17-02-28 20:04:45.027 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:45.154 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:45.164 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:45.224 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:45.291 -08 000000033 INF: Y Motor: Unshifted Position: 4120713
17-02-28 20:04:45.341 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:45.464 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:45.474 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:45.538 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:45.603 -08 000000033 INF: Y Motor: Unshifted Position: 4920677
17-02-28 20:04:45.653 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:45.775 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:45.788 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:45.850 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:45.913 -08 000000033 INF: Y Motor: Unshifted Position: 5684613
17-02-28 20:04:45.963 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:46.086 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:46.100 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:46.161 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:46.226 -08 000000033 INF: Y Motor: Unshifted Position: 5953354
17-02-28 20:04:46.226 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:46.226 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:46.289 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:04:46.289 -08 000000033 INF: Y Motor: Moved to 64.5335 after 2371 ms
17-02-28 20:04:46.289 -08 000000033 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:46.349 -08 000000033 INF: Y Motor: Recv v 4096\r
17-02-28 20:04:46.349 -08 000000033 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:46.349 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:46.412 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:46.413 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:04:46.413 -08 000000033 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:46.413 -08 000000033 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:46.475 -08 000000033 INF: Y Motor: Recv v 402653184\r
17-02-28 20:04:46.475 -08 000000033 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:04:46.475 -08 000000033 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:46.475 -08 000000033 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:46.476 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:46.540 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:04:46.540 -08 000000033 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:46.540 -08 000000033 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:46.540 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:46.600 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:04:46.600 -08 000000033 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:46.600 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:46.663 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:04:46.663 -08 000000033 INF: ======================================
17-02-28 20:04:46.664 -08 000000084 INF: ===================Move X,Y===================
17-02-28 20:04:46.665 -08 000000084 INF: ======================================
17-02-28 20:04:46.667 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:46.667 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:46.667 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:04:46.668 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:04:46.725 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:46.725 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:04:46.726 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:46.785 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:04:46.785 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:04:46.786 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:46.786 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:46.786 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:46.846 -08 000000069 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:04:46.846 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:04:46.847 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:46.847 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:46.848 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:04:46.848 -08 000000044 INF: ===================Set YMotor gains for scans===================
17-02-28 20:04:46.849 -08 000000044 INF: ======================================
17-02-28 20:04:46.849 -08 000000095 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:04:46.849 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:04:46.850 -08 000000095 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:04:46.851 -08 000000095 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:04:46.851 -08 000000095 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:04:46.911 -08 000000059 INF: FPGA: Recv TDIYPOS
17-02-28 20:04:46.911 -08 000000095 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:04:46.913 -08 000000095 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:04:46.913 -08 000000095 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:04:46.974 -08 000000045 INF: FPGA: Recv TDIYARM2
17-02-28 20:04:46.975 -08 000000095 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:04:46.976 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:04:46.978 -08 000000095 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:04:46.978 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:04:46.979 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:04:46.980 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:04:46.981 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:47.036 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:47.099 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:47.347 -08 000000095 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:04:47.347 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:04:47.347 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:47.349 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:47.362 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:04:47.364 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:47.411 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:47.661 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:47.721 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:47.742 -08 000000095 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:04:47.742 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:04:47.742 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:47.757 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:04:47.758 -08 000000095 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:04:47.760 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:04:47.761 -08 000000095 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:47.762 -08 000000095 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:04:47.762 -08 000000095 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:47.764 -08 000000095 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:04:47.764 -08 000000095 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:04:47.764 -08 000000095 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:04:47.764 -08 000000095 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:04:47.782 -08 000000033 INF: FPGA: Recv ZYT 
17-02-28 20:04:47.782 -08 000000095 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:04:47.782 -08 000000095 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:04:47.849 -08 000000069 INF: FPGA: Recv ZARM
17-02-28 20:04:47.850 -08 000000095 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 67.7479 ms
17-02-28 20:04:47.850 -08 000000095 INF: Z Motor: ArmAbsStepped took 85.8187 ms
17-02-28 20:04:47.850 -08 000000095 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:47.851 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:04:47.852 -08 000000095 INF: ======================================
17-02-28 20:04:47.854 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:47.854 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:47.855 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:47.855 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:47.856 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:47.857 -08 000000032 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:04:47.857 -08 000000100 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:04:47.857 -08 000000032 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:04:47.857 -08 000000032 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:04:47.857 -08 000000032 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:04:47.857 -08 000000032 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:04:47.857 -08 000000100 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:04:47.857 -08 000000100 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:04:47.857 -08 000000100 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:04:47.858 -08 000000100 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:04:47.971 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:48.034 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:48.221 -08 000000059 INF: FPGA: Recv EX2MV
17-02-28 20:04:48.221 -08 000000059 INF: FPGA: Recv EX1MV
17-02-28 20:04:48.221 -08 000000032 INF: Excitation Filter 2: Moved -107 steps in 364.1224 ms
17-02-28 20:04:48.221 -08 000000100 INF: Excitation Filter 1: Moved -107 steps in 363.9919 ms
17-02-28 20:04:48.221 -08 000000100 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 364.1717 ms
17-02-28 20:04:48.221 -08 000000100 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 364.2433 ms
17-02-28 20:04:48.221 -08 000000032 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 364.2329 ms
17-02-28 20:04:48.221 -08 000000032 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 364.6128 ms
17-02-28 20:04:48.222 -08 000000100 INF: ======================================
17-02-28 20:04:48.222 -08 000000032 INF: ======================================
17-02-28 20:04:48.223 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:48.224 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:48.225 -08 000000038 INF: ===================Serial===================
17-02-28 20:04:48.225 -08 000000065 INF: ===================Camera TDI===================
17-02-28 20:04:48.225 -08 000000031 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:48.225 -08 000000098 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:48.225 -08 000000098 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:04:48.226 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:48.226 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:48.226 -08 000000038 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:04:48.226 -08 000000065 INF: ===================Camera TDI, Parallel===================
17-02-28 20:04:48.226 -08 000000031 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:04:48.226 -08 000000038 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:04:48.227 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:04:48.227 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:04:48.227 -08 000000031 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:04:48.228 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.228 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.228 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.228 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.284 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:48.288 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:04:48.288 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:48.288 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:48.347 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:48.348 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:04:48.348 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:48.378 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.378 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.378 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.378 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.409 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:04:48.409 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:48.409 -08 000000098 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:04:48.409 -08 000000098 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:04:48.471 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:04:48.471 -08 000000098 INF: Y Motor: Start the move command
17-02-28 20:04:48.471 -08 000000098 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:48.528 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.528 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.528 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.528 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.533 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:04:48.533 -08 000000098 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:04:48.533 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:48.597 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:48.658 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:48.659 -08 000000098 INF: Y Motor: Unshifted Position: 5935033
17-02-28 20:04:48.678 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.678 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.678 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:48.678 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:48.709 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:48.828 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:04:48.828 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:04:48.828 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:04:48.828 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:04:48.828 -08 000000064 INF: ===================Camera #2 Frame #1===================
17-02-28 20:04:48.828 -08 000000036 INF: ===================Camera #0 Frame #1===================
17-02-28 20:04:48.834 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:48.908 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:48.970 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:48.971 -08 000000098 INF: Y Motor: Unshifted Position: 5888227
17-02-28 20:04:48.981 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:04:48.981 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:04:48.981 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:04:48.981 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:04:48.981 -08 000000036 INF: ===================Camera #0 Frame #3===================
17-02-28 20:04:48.981 -08 000000064 INF: ===================Camera #2 Frame #3===================
17-02-28 20:04:49.021 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:49.137 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:04:49.137 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:04:49.137 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:04:49.137 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:04:49.137 -08 000000064 INF: ===================Camera #2 Frame #4===================
17-02-28 20:04:49.137 -08 000000036 INF: ===================Camera #0 Frame #4===================
17-02-28 20:04:49.147 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:49.220 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:49.281 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:49.282 -08 000000098 INF: Y Motor: Unshifted Position: 5841472
17-02-28 20:04:49.290 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:49.290 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:04:49.290 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:49.290 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:04:49.290 -08 000000036 INF: ===================Camera #0 Frame #5===================
17-02-28 20:04:49.290 -08 000000064 INF: ===================Camera #2 Frame #5===================
17-02-28 20:04:49.332 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:49.342 -08 000000085 INF: FPGA: Recv ZWAIT 
17-02-28 20:04:49.342 -08 000000085 INF: FPGA: Recv TDIYWAIT
17-02-28 20:04:49.342 -08 000000031 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:49.343 -08 000000038 INF: ===================Serial===================
17-02-28 20:04:49.344 -08 000000031 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:04:49.344 -08 000000038 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:04:49.345 -08 000000038 INF: ===================Serial===================
17-02-28 20:04:49.345 -08 000000100 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:04:49.345 -08 000000044 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:04:49.345 -08 000000100 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:04:49.345 -08 000000100 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:04:49.345 -08 000000100 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:04:49.345 -08 000000100 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:04:49.345 -08 000000044 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:04:49.345 -08 000000044 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:04:49.345 -08 000000044 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:04:49.346 -08 000000044 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:04:49.346 -08 000000038 INF: ======================================
17-02-28 20:04:49.443 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:04:49.443 -08 000000036 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:04:49.443 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:04:49.443 -08 000000036 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:04:49.443 -08 000000064 INF: ===================Camera #2 Frame #6===================
17-02-28 20:04:49.443 -08 000000036 INF: ===================Camera #0 Frame #6===================
17-02-28 20:04:49.446 -08 000000064 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:04:49.446 -08 000000036 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:04:49.447 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:49.448 -08 000000036 INF: ===================CameraTDI Cleanup===================
17-02-28 20:04:49.459 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:49.471 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:04:49.471 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:04:49.472 -08 000000064 INF: ======================================
17-02-28 20:04:49.495 -08 000000036 INF: Camera #0 ReleaseBuffer
17-02-28 20:04:49.495 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:04:49.496 -08 000000036 INF: ======================================
17-02-28 20:04:49.497 -08 000000065 INF: ===================Camera TDI===================
17-02-28 20:04:49.499 -08 000000065 INF: ======================================
17-02-28 20:04:49.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:49.594 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:49.595 -08 000000098 INF: Y Motor: Unshifted Position: 5797050
17-02-28 20:04:49.645 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:49.719 -08 000000095 INF: FPGA: Recv EX1MV
17-02-28 20:04:49.719 -08 000000095 INF: FPGA: Recv EX2MV
17-02-28 20:04:49.719 -08 000000044 INF: Excitation Filter 2: Moved 107 steps in 373.5014 ms
17-02-28 20:04:49.719 -08 000000044 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.6041 ms
17-02-28 20:04:49.719 -08 000000044 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.685 ms
17-02-28 20:04:49.719 -08 000000100 INF: Excitation Filter 1: Moved 107 steps in 373.714 ms
17-02-28 20:04:49.719 -08 000000100 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.9166 ms
17-02-28 20:04:49.719 -08 000000100 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.9831 ms
17-02-28 20:04:49.719 -08 000000044 INF: ======================================
17-02-28 20:04:49.719 -08 000000100 INF: ======================================
17-02-28 20:04:49.721 -08 000000031 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:49.722 -08 000000031 INF: ======================================
17-02-28 20:04:49.783 -08 000000098 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:04:49.783 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:49.783 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:49.844 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:49.845 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:04:49.845 -08 000000098 INF: Y Motor: Moved to 62.9704 after 1312 ms
17-02-28 20:04:49.845 -08 000000098 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:49.907 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:49.908 -08 000000098 INF: Y Motor: Recv v 4097\r
17-02-28 20:04:49.908 -08 000000098 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:49.908 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:49.970 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:04:49.970 -08 000000098 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:49.970 -08 000000098 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:50.032 -08 000000098 INF: Y Motor: Recv v 134217728\r
17-02-28 20:04:50.032 -08 000000098 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:04:50.032 -08 000000098 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:50.032 -08 000000098 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:50.094 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:04:50.094 -08 000000098 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:50.094 -08 000000098 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:50.094 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:50.156 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:04:50.156 -08 000000098 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:50.156 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:50.157 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:50.217 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:50.218 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:04:50.218 -08 000000098 INF: ======================================
17-02-28 20:04:50.219 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:50.220 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:04:50.221 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.221 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:04:50.279 -08 000000073 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:04:50.279 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:50.343 -08 000000067 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:04:50.343 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:04:50.405 -08 000000054 INF: FPGA: Recv ZADCR 2425
17-02-28 20:04:50.405 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:04:50.405 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:04:50.465 -08 000000040 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:04:50.465 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:04:50.465 -08 000000042 INF: TDIScan finished after 6849.9294 ms
17-02-28 20:04:50.465 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:04:50.465 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:04:50.465 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:04:50.467 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:50.530 -08 000000101 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:04:50.530 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:50.531 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.532 -08 000000031 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:04:50.532 -08 000000030 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:04:50.532 -08 000000044 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:04:50.532 -08 000000031 INF: ======================================
17-02-28 20:04:50.532 -08 000000044 INF: ======================================
17-02-28 20:04:50.532 -08 000000030 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:04:50.532 -08 000000030 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:04:50.593 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:04:50.593 -08 000000030 INF: ======================================
17-02-28 20:04:50.594 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.595 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.596 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:04:50.637 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.637 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:04:50.666 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.666 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:04:50.695 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.695 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:04:50.723 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:04:50.723 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:50.723 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:50.724 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:04:50.732 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:50.732 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:04:50.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:04:50.781 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:50.842 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:51.092 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:51.154 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:51.404 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:51.418 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:04:51.441 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0879249157139598Best Z position at top surface = -0.159227103348627Best Z position at top surface + compensator offset = -0.136527103348627 C:2,L:4,T
17-02-28 20:04:51.442 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.159227103348627
17-02-28 20:04:51.442 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97314
17-02-28 20:04:51.442 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0879249157139598
17-02-28 20:04:51.442 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.62987
17-02-28 20:04:51.442 -08 000000042 INF: Z-height at LaneTopSurface is -0.159227103348627.
17-02-28 20:04:51.442 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:51.467 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:51.577 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:04:51.577 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:04:51.590 -08 000000032 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:51.590 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:04:51.592 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.592 -08 000000042 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:04:51.592 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.593 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.593 -08 000000069 INF: ===================Move Tilt Motor 1===================
17-02-28 20:04:51.593 -08 000000100 INF: ===================Move Tilt Motor 2===================
17-02-28 20:04:51.594 -08 000000070 INF: ===================Move Tilt Motor 3===================
17-02-28 20:04:51.594 -08 000000070 INF: ======================================
17-02-28 20:04:51.594 -08 000000069 INF: ======================================
17-02-28 20:04:51.594 -08 000000100 INF: ======================================
17-02-28 20:04:51.595 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.596 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.596 -08 000000042 INF: ETF Best Z: -0.1365271 mm (35789 DAC)
17-02-28 20:04:51.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:51.598 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:04:51.598 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:04:52.034 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:52.034 -08 000000084 INF: FPGA: Recv MIOCOMPF
17-02-28 20:04:52.034 -08 000000042 INF: Compensator: Moved IntoPath in 437 ms
17-02-28 20:04:52.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:52.036 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:04:52.042 -08 000000042 INF: Swath 1 position calculated to be: {X=76.92664, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:04:52.042 -08 000000042 INF: Swath 2 position calculated to be: {X=78.03464, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:04:52.048 -08 000000042 INF: Swath 0: Converted transform from (-42.15379, 3.876512) pixels to (-0.01449, 0.00138) mm.
17-02-28 20:04:52.054 -08 000000042 INF: Swath 1: Converted transform from (-71.32906, 2.367295) pixels to (-0.024495, 0.00069) mm.
17-02-28 20:04:52.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:04:52.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:04:52.055 -08 000000042 INF: Transformed XStagePosition from 76.92664 mm to 76.9121457422152 mm.
17-02-28 20:04:52.066 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5544693554994 mm.
17-02-28 20:04:52.066 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3544693554994 mm.
17-02-28 20:04:52.066 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4452193554994 mm.
17-02-28 20:04:52.068 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:52.069 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:04:52.069 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:52.069 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = D_1
17-02-28 20:04:52.077 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:52.078 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:52.078 -08 000000063 INF: ===================MoveEmissionFilters===================
17-02-28 20:04:52.078 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:52.079 -08 000000092 INF: ===================Move X,Y===================
17-02-28 20:04:52.079 -08 000000031 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:52.079 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:04:52.079 -08 000000070 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:52.079 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:52.079 -08 000000092 INF: ===================Move X,Y, Parallel===================
17-02-28 20:04:52.079 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:52.080 -08 000000031 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:52.080 -08 000000070 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:52.080 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:04:52.080 -08 000000095 INF: ===================Move X Motor without settling===================
17-02-28 20:04:52.080 -08 000000059 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:52.080 -08 000000095 INF: X Motor: Xmit PR VM\n
17-02-28 20:04:52.080 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:04:52.081 -08 000000059 INF: Y Motor: Moving to 64.5545 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:04:52.081 -08 000000059 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:52.081 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:52.081 -08 000000090 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:04:52.081 -08 000000102 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:04:52.081 -08 000000044 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:04:52.081 -08 000000064 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:04:52.081 -08 000000034 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:04:52.081 -08 000000102 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:04:52.081 -08 000000047 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:04:52.081 -08 000000085 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:04:52.081 -08 000000064 INF: ======================================
17-02-28 20:04:52.081 -08 000000068 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:04:52.082 -08 000000102 INF: ======================================
17-02-28 20:04:52.082 -08 000000047 INF: ======================================
17-02-28 20:04:52.082 -08 000000085 INF: ======================================
17-02-28 20:04:52.082 -08 000000034 INF: ======================================
17-02-28 20:04:52.082 -08 000000032 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:04:52.082 -08 000000032 INF: Z Motor: Moving to -0.1565 mm, started at -0.0100 mm
17-02-28 20:04:52.082 -08 000000032 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:04:52.083 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:04:52.084 -08 000000069 INF: ======================================
17-02-28 20:04:52.084 -08 000000090 INF: ======================================
17-02-28 20:04:52.084 -08 000000044 INF: ======================================
17-02-28 20:04:52.085 -08 000000068 INF: ======================================
17-02-28 20:04:52.085 -08 000000031 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:04:52.086 -08 000000070 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:04:52.086 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:04:52.086 -08 000000031 INF: ======================================
17-02-28 20:04:52.087 -08 000000070 INF: ======================================
17-02-28 20:04:52.087 -08 000000100 INF: ======================================
17-02-28 20:04:52.087 -08 000000063 INF: ======================================
17-02-28 20:04:52.090 -08 000000036 INF: FPGA: Recv ZTRG 
17-02-28 20:04:52.090 -08 000000032 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:04:52.091 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:52.152 -08 000000044 INF: FPGA: Recv ZYT 
17-02-28 20:04:52.152 -08 000000032 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:04:52.152 -08 000000032 INF: FPGA: Xmit ZMV 41032\n
17-02-28 20:04:52.153 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:04:52.153 -08 000000059 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:52.153 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:52.155 -08 000000095 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:04:52.155 -08 000000095 INF: X Motor: Xmit PR VI\n
17-02-28 20:04:52.213 -08 000000093 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:04:52.213 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:04:52.215 -08 000000095 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:04:52.215 -08 000000095 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:04:52.215 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:04:52.215 -08 000000095 INF: X Motor: Moving to 76.9121 mm @15.000 mm/sec, started at 77.4814 mm
17-02-28 20:04:52.215 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:52.215 -08 000000095 INF: X Motor: Xmit MA 7337\n
17-02-28 20:04:52.279 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:04:52.279 -08 000000059 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:52.279 -08 000000095 INF: X Motor: Recv MA 7337\r\n>
17-02-28 20:04:52.279 -08 000000059 INF: Y Motor: Set target position to 5955447 encoder counts
17-02-28 20:04:52.279 -08 000000059 INF: Y Motor: Xmit s r0xca 5955447\r
17-02-28 20:04:52.279 -08 000000095 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:04:52.338 -08 000000093 INF: FPGA: Recv ZMV 
17-02-28 20:04:52.338 -08 000000032 INF: Z Motor: MoveAndTrigger 'ZMV' command took 186.1256 ms
17-02-28 20:04:52.338 -08 000000032 INF: FPGA: Xmit ZDACR\n
17-02-28 20:04:52.340 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:04:52.340 -08 000000059 INF: Y Motor: Start the move command
17-02-28 20:04:52.340 -08 000000059 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:52.341 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:52.402 -08 000000067 INF: FPGA: Recv ZDACR 41032
17-02-28 20:04:52.402 -08 000000032 INF: Z Motor: MoveAndTrigger took 319.4833 ms w/comms
17-02-28 20:04:52.402 -08 000000032 INF: Z Motor: After move to -0.1565, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:04:52.402 -08 000000032 INF: Z Motor: MoveAbsStepped took 319.6479 ms
17-02-28 20:04:52.402 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:52.403 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:52.404 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:04:52.404 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:04:52.404 -08 000000059 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:04:52.404 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:52.404 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:04:52.405 -08 000000068 INF: ===================Camera Arm TDI===================
17-02-28 20:04:52.405 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:52.406 -08 000000068 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:52.406 -08 000000101 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:04:52.406 -08 000000068 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:52.406 -08 000000101 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:52.407 -08 000000101 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:04:52.464 -08 000000054 INF: FPGA: Recv ZSEL 
17-02-28 20:04:52.465 -08 000000101 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:52.465 -08 000000101 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:04:52.527 -08 000000067 INF: FPGA: Recv TDIBB
17-02-28 20:04:52.527 -08 000000101 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:04:52.528 -08 000000101 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:04:52.529 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:52.530 -08 000000059 INF: Y Motor: Unshifted Position: 5881420
17-02-28 20:04:52.530 -08 000000101 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:04:52.531 -08 000000101 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:04:52.531 -08 000000101 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:04:52.580 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:52.588 -08 000000098 INF: FPGA: Recv ZSTEP 
17-02-28 20:04:52.588 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:52.590 -08 000000101 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:04:52.590 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:52.592 -08 000000101 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:04:52.592 -08 000000101 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:04:52.592 -08 000000101 INF: Z Motor: Arming to move to -0.1165 mm
17-02-28 20:04:52.592 -08 000000101 INF: FPGA: Xmit ZYT 6435447 4\n
17-02-28 20:04:52.650 -08 000000044 INF: FPGA: Recv ZYT 
17-02-28 20:04:52.650 -08 000000101 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6381420 enc / 63.814 mm / ) = 6435447 enc / 64.354 mm
17-02-28 20:04:52.650 -08 000000101 INF: FPGA: Xmit ZARM 30546\n
17-02-28 20:04:52.653 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:52.702 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:52.712 -08 000000083 INF: FPGA: Recv ZARM
17-02-28 20:04:52.712 -08 000000101 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9792 ms
17-02-28 20:04:52.712 -08 000000101 INF: Z Motor: ArmAbsStepped took 120.0398 ms
17-02-28 20:04:52.712 -08 000000101 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:04:52.713 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:52.713 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:04:52.714 -08 000000095 INF: X Motor: Xmit PR ER\n
17-02-28 20:04:52.715 -08 000000101 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:04:52.715 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:04:52.717 -08 000000101 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:04:52.717 -08 000000101 INF: ===================TDI Scan Setup===================
17-02-28 20:04:52.718 -08 000000101 INF: ======================================
17-02-28 20:04:52.776 -08 000000095 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:04:52.776 -08 000000095 INF: X Motor: Moved to 76.9126 after 497 ms
17-02-28 20:04:52.776 -08 000000095 INF: ======================================
17-02-28 20:04:52.840 -08 000000059 INF: Y Motor: Unshifted Position: 5955448
17-02-28 20:04:52.840 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:04:52.840 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:52.902 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:04:52.902 -08 000000059 INF: Y Motor: Moved to 64.5545 after 498 ms
17-02-28 20:04:52.902 -08 000000059 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:04:52.963 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:52.964 -08 000000059 INF: Y Motor: Recv v 4096\r
17-02-28 20:04:52.964 -08 000000059 INF: Y Motor: Status After move finished OK:
17-02-28 20:04:52.964 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:53.027 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:53.028 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:04:53.028 -08 000000059 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:53.028 -08 000000059 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:04:53.090 -08 000000059 INF: Y Motor: Recv v 402653184\r
17-02-28 20:04:53.090 -08 000000059 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:04:53.090 -08 000000059 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:04:53.090 -08 000000059 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:04:53.152 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:04:53.152 -08 000000059 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:04:53.152 -08 000000059 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:04:53.152 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:53.214 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:04:53.214 -08 000000059 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:04:53.214 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:53.276 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:04:53.276 -08 000000059 INF: ======================================
17-02-28 20:04:53.277 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:53.277 -08 000000092 INF: ===================Move X,Y===================
17-02-28 20:04:53.278 -08 000000092 INF: ======================================
17-02-28 20:04:53.337 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:53.373 -08 000000068 INF: Camera #0 AttachBuffer (imageDataPtr = 56909434928 imgPtr = 56909434928 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:04:53.373 -08 000000068 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:04:53.373 -08 000000068 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:53.388 -08 000000068 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:53.390 -08 000000068 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:04:53.587 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:53.651 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:53.901 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:53.963 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:54.213 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:54.274 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:54.399 -08 000000068 INF: Camera #2 AttachBuffer (imageDataPtr = 58721374256 imgPtr = 59627343920 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:04:54.399 -08 000000068 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:04:54.400 -08 000000068 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:04:54.416 -08 000000068 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:04:54.418 -08 000000068 INF: ===================Camera Arm TDI===================
17-02-28 20:04:54.419 -08 000000068 INF: ======================================
17-02-28 20:04:54.420 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:04:54.421 -08 000000032 INF: ======================================
17-02-28 20:04:54.422 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:04:54.423 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:54.423 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:04:54.423 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:04:54.462 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:04:54.462 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:04:54.522 -08 000000092 INF: FPGA: Recv ZFREQCL
17-02-28 20:04:54.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:04:54.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:54.523 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:04:54.524 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:54.586 -08 000000038 INF: FPGA: Recv TDIYERD 6455448
17-02-28 20:04:54.586 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455448 counts (64.554 mm)
17-02-28 20:04:54.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:54.587 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:54.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:54.587 -08 000000004 INF: ===================TDI FPGA Arm===================
17-02-28 20:04:54.587 -08 000000044 INF: ===================Set YMotor gains for scans===================
17-02-28 20:04:54.588 -08 000000044 INF: ======================================
17-02-28 20:04:54.588 -08 000000004 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:54.589 -08 000000004 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:04:54.589 -08 000000004 INF: FPGA: Xmit TDIYPOS 6344522\n
17-02-28 20:04:54.648 -08 000000102 INF: FPGA: Recv TDIYPOS
17-02-28 20:04:54.648 -08 000000004 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:54.649 -08 000000004 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:04:54.650 -08 000000004 INF: FPGA: Xmit TDIYARM3 139264 6435447 1 1\n
17-02-28 20:04:54.710 -08 000000101 INF: FPGA: Recv TDIYARM3
17-02-28 20:04:54.710 -08 000000004 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:04:54.711 -08 000000004 INF: ===================TDI FPGA Arm===================
17-02-28 20:04:54.712 -08 000000004 INF: ======================================
17-02-28 20:04:54.713 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:04:54.714 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:04:54.714 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:54.714 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:54.715 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:54.716 -08 000000032 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:04:54.716 -08 000000067 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:04:54.716 -08 000000032 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:04:54.716 -08 000000032 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:04:54.716 -08 000000032 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:04:54.716 -08 000000067 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:04:54.716 -08 000000032 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:04:54.716 -08 000000067 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:04:54.716 -08 000000067 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:04:54.717 -08 000000067 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:04:54.837 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:54.897 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:04:55.146 -08 000000085 INF: FPGA: Recv EX2MV
17-02-28 20:04:55.146 -08 000000085 INF: FPGA: Recv EX1MV
17-02-28 20:04:55.146 -08 000000067 INF: Excitation Filter 1: Moved -107 steps in 429.7348 ms
17-02-28 20:04:55.146 -08 000000067 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 429.8565 ms
17-02-28 20:04:55.146 -08 000000067 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 429.9341 ms
17-02-28 20:04:55.146 -08 000000032 INF: Excitation Filter 2: Moved -107 steps in 429.9504 ms
17-02-28 20:04:55.146 -08 000000032 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 430.1451 ms
17-02-28 20:04:55.146 -08 000000032 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 430.2108 ms
17-02-28 20:04:55.146 -08 000000067 INF: ======================================
17-02-28 20:04:55.146 -08 000000032 INF: ======================================
17-02-28 20:04:55.147 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:04:55.147 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:55.148 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:04:55.149 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:04:55.149 -08 000000083 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:04:55.149 -08 000000030 INF: ===================FPGA Z Wait===================
17-02-28 20:04:55.149 -08 000000064 INF: ===================Move Y Motor without settling===================
17-02-28 20:04:55.150 -08 000000064 INF: Y Motor: Moving to 14.9061 mm @6.500 mm/sec, started at 64.5545 mm
17-02-28 20:04:55.150 -08 000000064 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:04:55.150 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:04:55.150 -08 000000030 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:04:55.150 -08 000000077 INF: ===================Camera TDI, Parallel===================
17-02-28 20:04:55.150 -08 000000083 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:04:55.151 -08 000000083 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:04:55.151 -08 000000004 INF: ===================Camera TDI===================
17-02-28 20:04:55.151 -08 000000031 INF: ===================Camera TDI===================
17-02-28 20:04:55.152 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:55.152 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:55.153 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:55.153 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:55.211 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:04:55.211 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:55.211 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:55.211 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:04:55.212 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:04:55.212 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 5 of 5 seconds left===================
17-02-28 20:04:55.212 -08 000000064 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:04:55.212 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:04:55.274 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:04:55.274 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:04:55.302 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:55.302 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:55.303 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:55.303 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:55.334 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:04:55.334 -08 000000064 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:04:55.334 -08 000000064 INF: Y Motor: Set target position to 990613 encoder counts
17-02-28 20:04:55.334 -08 000000064 INF: Y Motor: Xmit s r0xca 990613\r
17-02-28 20:04:55.399 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:04:55.399 -08 000000064 INF: Y Motor: Start the move command
17-02-28 20:04:55.399 -08 000000064 INF: Y Motor: Xmit t 1\r
17-02-28 20:04:55.452 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:55.452 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:55.453 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:04:55.453 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:04:55.461 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:04:55.461 -08 000000064 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:04:55.461 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:55.521 -08 000000090 INF: FPGA: Recv ZWAIT 
17-02-28 20:04:55.521 -08 000000030 INF: ======================================
17-02-28 20:04:55.585 -08 000000064 INF: Y Motor: Unshifted Position: 5893809
17-02-28 20:04:55.602 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:04:55.602 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:04:55.602 -08 000000004 INF: ===================Camera #0 Frame #4===================
17-02-28 20:04:55.603 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:04:55.603 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:04:55.603 -08 000000031 INF: ===================Camera #2 Frame #4===================
17-02-28 20:04:55.635 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:55.759 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:55.764 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:04:55.764 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:04:55.764 -08 000000004 INF: ===================Camera #0 Frame #10===================
17-02-28 20:04:55.766 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:04:55.766 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:04:55.766 -08 000000031 INF: ===================Camera #2 Frame #10===================
17-02-28 20:04:55.898 -08 000000064 INF: Y Motor: Unshifted Position: 5690147
17-02-28 20:04:55.932 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:04:55.932 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:04:55.932 -08 000000004 INF: ===================Camera #0 Frame #17===================
17-02-28 20:04:55.935 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:04:55.935 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:04:55.935 -08 000000031 INF: ===================Camera #2 Frame #17===================
17-02-28 20:04:55.948 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.053 -08 000000037 INF: RunCopyService queue size at 2/28/2017 8:04:56 PM is 2
17-02-28 20:04:56.072 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.103 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:56.103 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:56.103 -08 000000004 INF: ===================Camera #0 Frame #23===================
17-02-28 20:04:56.107 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:04:56.107 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:04:56.107 -08 000000031 INF: ===================Camera #2 Frame #23===================
17-02-28 20:04:56.211 -08 000000064 INF: Y Motor: Unshifted Position: 5487137
17-02-28 20:04:56.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:56.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 4 of 5 seconds left===================
17-02-28 20:04:56.261 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.272 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:04:56.272 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:04:56.272 -08 000000004 INF: ===================Camera #0 Frame #29===================
17-02-28 20:04:56.277 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:04:56.277 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:04:56.277 -08 000000031 INF: ===================Camera #2 Frame #29===================
17-02-28 20:04:56.385 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.440 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:04:56.440 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:04:56.440 -08 000000004 INF: ===================Camera #0 Frame #35===================
17-02-28 20:04:56.446 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:04:56.446 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:04:56.446 -08 000000031 INF: ===================Camera #2 Frame #35===================
17-02-28 20:04:56.523 -08 000000064 INF: Y Motor: Unshifted Position: 5284330
17-02-28 20:04:56.573 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.608 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41.
17-02-28 20:04:56.608 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41
17-02-28 20:04:56.608 -08 000000004 INF: ===================Camera #0 Frame #41===================
17-02-28 20:04:56.615 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:04:56.615 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:04:56.615 -08 000000031 INF: ===================Camera #2 Frame #42===================
17-02-28 20:04:56.697 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.776 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:04:56.776 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:04:56.776 -08 000000004 INF: ===================Camera #0 Frame #48===================
17-02-28 20:04:56.788 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:04:56.788 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:04:56.788 -08 000000031 INF: ===================Camera #2 Frame #48===================
17-02-28 20:04:56.835 -08 000000064 INF: Y Motor: Unshifted Position: 5082606
17-02-28 20:04:56.885 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:56.948 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:04:56.948 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:04:56.948 -08 000000004 INF: ===================Camera #0 Frame #54===================
17-02-28 20:04:56.958 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:04:56.958 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:04:56.958 -08 000000031 INF: ===================Camera #2 Frame #54===================
17-02-28 20:04:57.010 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.117 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:04:57.117 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:04:57.117 -08 000000004 INF: ===================Camera #0 Frame #60===================
17-02-28 20:04:57.128 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:04:57.128 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:04:57.128 -08 000000031 INF: ===================Camera #2 Frame #61===================
17-02-28 20:04:57.146 -08 000000064 INF: Y Motor: Unshifted Position: 4879157
17-02-28 20:04:57.196 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:57.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 3 of 5 seconds left===================
17-02-28 20:04:57.286 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-02-28 20:04:57.286 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-02-28 20:04:57.286 -08 000000004 INF: ===================Camera #0 Frame #66===================
17-02-28 20:04:57.301 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:04:57.301 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:04:57.301 -08 000000031 INF: ===================Camera #2 Frame #67===================
17-02-28 20:04:57.320 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.455 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:04:57.455 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:04:57.455 -08 000000004 INF: ===================Camera #0 Frame #73===================
17-02-28 20:04:57.459 -08 000000064 INF: Y Motor: Unshifted Position: 4675706
17-02-28 20:04:57.471 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:04:57.471 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:04:57.471 -08 000000031 INF: ===================Camera #2 Frame #73===================
17-02-28 20:04:57.509 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.627 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:04:57.627 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:04:57.627 -08 000000004 INF: ===================Camera #0 Frame #79===================
17-02-28 20:04:57.634 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.641 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:04:57.641 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:04:57.641 -08 000000031 INF: ===================Camera #2 Frame #79===================
17-02-28 20:04:57.770 -08 000000064 INF: Y Motor: Unshifted Position: 4473983
17-02-28 20:04:57.796 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:04:57.796 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:04:57.796 -08 000000004 INF: ===================Camera #0 Frame #85===================
17-02-28 20:04:57.810 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:04:57.810 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:04:57.810 -08 000000031 INF: ===================Camera #2 Frame #86===================
17-02-28 20:04:57.820 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.946 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:57.965 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-02-28 20:04:57.965 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-02-28 20:04:57.965 -08 000000004 INF: ===================Camera #0 Frame #91===================
17-02-28 20:04:57.983 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:04:57.983 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:04:57.983 -08 000000031 INF: ===================Camera #2 Frame #92===================
17-02-28 20:04:58.082 -08 000000064 INF: Y Motor: Unshifted Position: 4269021
17-02-28 20:04:58.132 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:58.135 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:04:58.135 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:04:58.135 -08 000000004 INF: ===================Camera #0 Frame #98===================
17-02-28 20:04:58.153 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:04:58.153 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:04:58.153 -08 000000031 INF: ===================Camera #2 Frame #98===================
17-02-28 20:04:58.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:58.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 2 of 5 seconds left===================
17-02-28 20:04:58.256 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:58.308 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:04:58.308 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:04:58.308 -08 000000004 INF: ===================Camera #0 Frame #104===================
17-02-28 20:04:58.323 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:04:58.323 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:04:58.323 -08 000000031 INF: ===================Camera #2 Frame #105===================
17-02-28 20:04:58.393 -08 000000064 INF: Y Motor: Unshifted Position: 4068810
17-02-28 20:04:58.443 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:58.477 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:04:58.477 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:04:58.477 -08 000000004 INF: ===================Camera #0 Frame #110===================
17-02-28 20:04:58.496 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:04:58.496 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:04:58.496 -08 000000031 INF: ===================Camera #2 Frame #111===================
17-02-28 20:04:58.570 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:58.647 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:04:58.647 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:04:58.647 -08 000000004 INF: ===================Camera #0 Frame #117===================
17-02-28 20:04:58.667 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:04:58.667 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:04:58.667 -08 000000031 INF: ===================Camera #2 Frame #117===================
17-02-28 20:04:58.706 -08 000000064 INF: Y Motor: Unshifted Position: 3864499
17-02-28 20:04:58.756 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:58.820 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:04:58.820 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:04:58.820 -08 000000004 INF: ===================Camera #0 Frame #123===================
17-02-28 20:04:58.837 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:04:58.837 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:04:58.837 -08 000000031 INF: ===================Camera #2 Frame #124===================
17-02-28 20:04:58.880 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:58.990 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:04:58.990 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:04:58.990 -08 000000004 INF: ===================Camera #0 Frame #129===================
17-02-28 20:04:59.011 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:04:59.011 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:04:59.011 -08 000000031 INF: ===================Camera #2 Frame #130===================
17-02-28 20:04:59.022 -08 000000064 INF: Y Motor: Unshifted Position: 3662996
17-02-28 20:04:59.072 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:59.160 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:04:59.160 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:04:59.160 -08 000000004 INF: ===================Camera #0 Frame #135===================
17-02-28 20:04:59.180 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:04:59.180 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:04:59.180 -08 000000031 INF: ===================Camera #2 Frame #136===================
17-02-28 20:04:59.194 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:59.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:04:59.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 1 of 5 seconds left===================
17-02-28 20:04:59.330 -08 000000064 INF: Y Motor: Unshifted Position: 3458687
17-02-28 20:04:59.330 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:04:59.330 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:04:59.330 -08 000000004 INF: ===================Camera #0 Frame #142===================
17-02-28 20:04:59.351 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:04:59.351 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:04:59.351 -08 000000031 INF: ===================Camera #2 Frame #142===================
17-02-28 20:04:59.380 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:59.502 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:04:59.502 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:04:59.502 -08 000000004 INF: ===================Camera #0 Frame #148===================
17-02-28 20:04:59.506 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:59.522 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:04:59.522 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:04:59.522 -08 000000031 INF: ===================Camera #2 Frame #149===================
17-02-28 20:04:59.642 -08 000000064 INF: Y Motor: Unshifted Position: 3255881
17-02-28 20:04:59.672 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:04:59.672 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:04:59.672 -08 000000004 INF: ===================Camera #0 Frame #154===================
17-02-28 20:04:59.692 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:59.696 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:04:59.696 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:04:59.696 -08 000000031 INF: ===================Camera #2 Frame #155===================
17-02-28 20:04:59.816 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:04:59.842 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:04:59.842 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:04:59.842 -08 000000004 INF: ===================Camera #0 Frame #161===================
17-02-28 20:04:59.866 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:04:59.866 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:04:59.866 -08 000000031 INF: ===================Camera #2 Frame #161===================
17-02-28 20:04:59.956 -08 000000064 INF: Y Motor: Unshifted Position: 3054384
17-02-28 20:05:00.006 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.015 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:05:00.015 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:05:00.015 -08 000000004 INF: ===================Camera #0 Frame #167===================
17-02-28 20:05:00.037 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:05:00.037 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:05:00.037 -08 000000031 INF: ===================Camera #2 Frame #168===================
17-02-28 20:05:00.130 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.185 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:05:00.185 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:05:00.185 -08 000000004 INF: ===================Camera #0 Frame #173===================
17-02-28 20:05:00.211 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:05:00.211 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:05:00.211 -08 000000031 INF: ===================Camera #2 Frame #174===================
17-02-28 20:05:00.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:05:00.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:05:00.213 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:05:00.213 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:05:00.266 -08 000000064 INF: Y Motor: Unshifted Position: 2850075
17-02-28 20:05:00.312 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:00.316 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.355 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:05:00.355 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:05:00.355 -08 000000004 INF: ===================Camera #0 Frame #179===================
17-02-28 20:05:00.381 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:05:00.381 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:05:00.381 -08 000000031 INF: ===================Camera #2 Frame #180===================
17-02-28 20:05:00.389 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF)
17-02-28 20:05:00.389 -08 000000018 INF: Current Position of Pump is: 15360
17-02-28 20:05:00.440 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.489 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:00.525 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:05:00.525 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:05:00.525 -08 000000004 INF: ===================Camera #0 Frame #186===================
17-02-28 20:05:00.551 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:05:00.551 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:05:00.551 -08 000000031 INF: ===================Camera #2 Frame #187===================
17-02-28 20:05:00.579 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF)
17-02-28 20:05:00.579 -08 000000018 INF: Current Position of Pump is: 15360
17-02-28 20:05:00.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Dispensing port PortC===================
17-02-28 20:05:00.580 -08 000000064 INF: Y Motor: Unshifted Position: 2648358
17-02-28 20:05:00.630 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.679 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD15360R\r
17-02-28 20:05:00.698 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:05:00.698 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:05:00.698 -08 000000004 INF: ===================Camera #0 Frame #192===================
17-02-28 20:05:00.725 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:05:00.725 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:05:00.725 -08 000000031 INF: ===================Camera #2 Frame #193===================
17-02-28 20:05:00.754 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.765 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:00.865 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:00.868 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:05:00.868 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:05:00.868 -08 000000004 INF: ===================Camera #0 Frame #198===================
17-02-28 20:05:00.890 -08 000000064 INF: Y Motor: Unshifted Position: 2444267
17-02-28 20:05:00.896 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:05:00.896 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:05:00.896 -08 000000031 INF: ===================Camera #2 Frame #199===================
17-02-28 20:05:00.940 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:00.951 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:01.038 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:05:01.038 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:05:01.038 -08 000000004 INF: ===================Camera #0 Frame #205===================
17-02-28 20:05:01.064 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:01.067 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:05:01.067 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:05:01.067 -08 000000031 INF: ===================Camera #2 Frame #206===================
17-02-28 20:05:01.201 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:01.201 -08 000000064 INF: Y Motor: Unshifted Position: 2241896
17-02-28 20:05:01.211 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:05:01.211 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:05:01.211 -08 000000004 INF: ===================Camera #0 Frame #211===================
17-02-28 20:05:01.241 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:05:01.241 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:05:01.241 -08 000000031 INF: ===================Camera #2 Frame #212===================
17-02-28 20:05:01.251 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:01.262 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:01.378 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:01.379 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:05:01.379 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:05:01.379 -08 000000004 INF: ===================Camera #0 Frame #217===================
17-02-28 20:05:01.412 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:05:01.412 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:05:01.412 -08 000000031 INF: ===================Camera #2 Frame #218===================
17-02-28 20:05:01.512 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:01.516 -08 000000064 INF: Y Motor: Unshifted Position: 2039531
17-02-28 20:05:01.549 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:05:01.549 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:05:01.549 -08 000000004 INF: ===================Camera #0 Frame #223===================
17-02-28 20:05:01.566 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:01.574 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:01.583 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:05:01.583 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:05:01.583 -08 000000031 INF: ===================Camera #2 Frame #225===================
17-02-28 20:05:01.691 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:01.719 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:05:01.719 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:05:01.719 -08 000000004 INF: ===================Camera #0 Frame #230===================
17-02-28 20:05:01.757 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:05:01.757 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:05:01.757 -08 000000031 INF: ===================Camera #2 Frame #231===================
17-02-28 20:05:01.824 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:01.828 -08 000000064 INF: Y Motor: Unshifted Position: 1835427
17-02-28 20:05:01.878 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:01.887 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:01.892 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:05:01.892 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:05:01.892 -08 000000004 INF: ===================Camera #0 Frame #236===================
17-02-28 20:05:01.928 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:05:01.928 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:05:01.928 -08 000000031 INF: ===================Camera #2 Frame #237===================
17-02-28 20:05:02.001 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:02.062 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:05:02.062 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:05:02.062 -08 000000004 INF: ===================Camera #0 Frame #242===================
17-02-28 20:05:02.099 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:05:02.099 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:05:02.099 -08 000000031 INF: ===================Camera #2 Frame #244===================
17-02-28 20:05:02.137 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:02.140 -08 000000064 INF: Y Motor: Unshifted Position: 1633924
17-02-28 20:05:02.190 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:02.198 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:02.232 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:05:02.232 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:05:02.232 -08 000000004 INF: ===================Camera #0 Frame #249===================
17-02-28 20:05:02.273 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:05:02.273 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:05:02.273 -08 000000031 INF: ===================Camera #2 Frame #250===================
17-02-28 20:05:02.311 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:02.405 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:05:02.405 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:05:02.405 -08 000000004 INF: ===================Camera #0 Frame #255===================
17-02-28 20:05:02.444 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:05:02.444 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:05:02.444 -08 000000031 INF: ===================Camera #2 Frame #256===================
17-02-28 20:05:02.448 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:02.449 -08 000000064 INF: Y Motor: Unshifted Position: 1429603
17-02-28 20:05:02.499 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:02.510 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:02.575 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:05:02.575 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:05:02.575 -08 000000004 INF: ===================Camera #0 Frame #261===================
17-02-28 20:05:02.614 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:05:02.614 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:05:02.614 -08 000000031 INF: ===================Camera #2 Frame #263===================
17-02-28 20:05:02.623 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:02.745 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:05:02.745 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:05:02.745 -08 000000004 INF: ===================Camera #0 Frame #267===================
17-02-28 20:05:02.760 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:02.762 -08 000000064 INF: Y Motor: Unshifted Position: 1226791
17-02-28 20:05:02.788 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:05:02.788 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:05:02.788 -08 000000031 INF: ===================Camera #2 Frame #269===================
17-02-28 20:05:02.812 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:02.823 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:02.884 -08 000000100 INF: FPGA: Recv TDIYWAIT
17-02-28 20:05:02.884 -08 000000083 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:02.886 -08 000000083 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:05:02.886 -08 000000073 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:05:02.887 -08 000000101 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:05:02.887 -08 000000073 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:05:02.887 -08 000000073 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:05:02.887 -08 000000073 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:05:02.887 -08 000000073 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:05:02.887 -08 000000101 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:05:02.887 -08 000000101 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:05:02.887 -08 000000101 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:05:02.888 -08 000000101 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:05:02.915 -08 000000004 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:02.915 -08 000000004 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:02.915 -08 000000004 INF: ===================Camera #0 Frame #272===================
17-02-28 20:05:02.932 -08 000000004 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:02.933 -08 000000004 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:02.936 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:03.073 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:03.076 -08 000000064 INF: Y Motor: Unshifted Position: 1023781
17-02-28 20:05:03.096 -08 000000004 INF: Camera #0 ReleaseBuffer
17-02-28 20:05:03.096 -08 000000031 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:03.096 -08 000000031 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:03.096 -08 000000031 INF: ===================Camera #2 Frame #272===================
17-02-28 20:05:03.096 -08 000000004 INF: ===================Camera TDI===================
17-02-28 20:05:03.105 -08 000000031 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:03.106 -08 000000031 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:03.126 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:03.126 -08 000000004 INF: ======================================
17-02-28 20:05:03.136 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:03.136 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:05:03.136 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:05:03.261 -08 000000033 INF: FPGA: Recv EX1MV
17-02-28 20:05:03.261 -08 000000033 INF: FPGA: Recv EX2MV
17-02-28 20:05:03.261 -08 000000073 INF: Excitation Filter 1: Moved 107 steps in 374.0059 ms
17-02-28 20:05:03.261 -08 000000101 INF: Excitation Filter 2: Moved 107 steps in 373.7485 ms
17-02-28 20:05:03.261 -08 000000073 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 374.1169 ms
17-02-28 20:05:03.261 -08 000000101 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.8899 ms
17-02-28 20:05:03.261 -08 000000101 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 374.0538 ms
17-02-28 20:05:03.261 -08 000000073 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 374.245 ms
17-02-28 20:05:03.261 -08 000000101 INF: ======================================
17-02-28 20:05:03.262 -08 000000073 INF: ======================================
17-02-28 20:05:03.262 -08 000000064 INF: Y Motor: Unshifted Position: 990613
17-02-28 20:05:03.262 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:03.262 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:03.263 -08 000000083 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:03.264 -08 000000083 INF: ======================================
17-02-28 20:05:03.306 -08 000000031 INF: Camera #2 ReleaseBuffer
17-02-28 20:05:03.306 -08 000000031 INF: ===================Camera TDI===================
17-02-28 20:05:03.324 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:05:03.324 -08 000000064 INF: Y Motor: Moved to 14.9061 after 7862 ms
17-02-28 20:05:03.324 -08 000000064 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:03.340 -08 000000031 INF: ======================================
17-02-28 20:05:03.341 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:05:03.343 -08 000000077 INF: ======================================
17-02-28 20:05:03.386 -08 000000064 INF: Y Motor: Recv v 4097\r
17-02-28 20:05:03.386 -08 000000064 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:03.386 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:03.447 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:05:03.447 -08 000000064 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:03.447 -08 000000064 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:03.509 -08 000000064 INF: Y Motor: Recv v 134217728\r
17-02-28 20:05:03.509 -08 000000064 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:05:03.509 -08 000000064 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:03.509 -08 000000064 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:03.575 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:05:03.575 -08 000000064 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:03.575 -08 000000064 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:03.575 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:03.636 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:05:03.636 -08 000000064 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:03.636 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:03.698 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:05:03.698 -08 000000064 INF: ======================================
17-02-28 20:05:03.699 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:03.700 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:03.701 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:03.701 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:05:03.758 -08 000000034 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:05:03.758 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:03.820 -08 000000033 INF: FPGA: Recv TDIYERD 1490614
17-02-28 20:05:03.820 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:05:03.882 -08 000000044 INF: FPGA: Recv ZADCR 35409
17-02-28 20:05:03.882 -08 000000042 INF: At scan end Y pos = 14.906 and Z pos = -0.135. Y moved -48.539 mm
17-02-28 20:05:03.882 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:05:03.944 -08 000000102 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:05:03.944 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:05:03.944 -08 000000042 INF: TDIScan finished after 11888.793 ms
17-02-28 20:05:03.944 -08 000000042 INF: Image[0]: Y should trigger at 63.445 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:05:03.944 -08 000000042 INF: Image[2]: Y should trigger at 63.445 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:05:03.946 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:03.981 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.555 um
17-02-28 20:05:03.981 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:03.982 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:05:04.010 -08 000000059 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:05:04.010 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.011 -08 000000064 INF: ===================Dither Clean Up Command===================
17-02-28 20:05:04.011 -08 000000067 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:05:04.011 -08 000000065 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:05:04.011 -08 000000100 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:05:04.012 -08 000000067 INF: ======================================
17-02-28 20:05:04.012 -08 000000100 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:05:04.012 -08 000000100 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:05:04.012 -08 000000065 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:04.012 -08 000000065 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:04.012 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:04.012 -08 000000078 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:05:04.012 -08 000000078 INF: ======================================
17-02-28 20:05:04.013 -08 000000090 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:05:04.069 -08 000000036 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:04.069 -08 000000036 INF: FPGA: Recv ZSEL 
17-02-28 20:05:04.069 -08 000000090 INF: FPGA: Xmit ZDACW 41032\n
17-02-28 20:05:04.069 -08 000000100 INF: ======================================
17-02-28 20:05:04.071 -08 000000065 INF: Y Motor: Recv ok\r
17-02-28 20:05:04.071 -08 000000065 INF: ======================================
17-02-28 20:05:04.131 -08 000000059 INF: FPGA: Recv ZDACW 
17-02-28 20:05:04.132 -08 000000090 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:05:04.132 -08 000000090 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:05:04.196 -08 000000077 INF: FPGA: Recv TDIBB
17-02-28 20:05:04.196 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:04.197 -08 000000090 INF: ======================================
17-02-28 20:05:04.198 -08 000000064 INF: ======================================
17-02-28 20:05:04.199 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:05:04.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:05:04.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:05:04.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:05:04.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:05:04.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:05:04.202 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Waiting for image analysis===================
17-02-28 20:05:04.202 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:05:04.202 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:05:04.203 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:05:04.225 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:05:04.226 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:05:04.226 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:05:04.226 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.226 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:05:04.226 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:05:04.227 -08 000000042 INF: Transformed XStagePosition from 78.03464 mm to 78.0101424511522 mm.
17-02-28 20:05:04.238 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5537793554841 mm.
17-02-28 20:05:04.238 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3537793554841 mm.
17-02-28 20:05:04.238 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4445293554841 mm.
17-02-28 20:05:04.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:05:04.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:04.241 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -156.5 um, section = D_1
17-02-28 20:05:04.259 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:05:04.268 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1103 Request: {"Cycle":2,"Lane":4,"Tile":1103,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF231","HCSMMF192","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.308 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:04.309 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:04.312 -08 000000054 INF: ===================MoveEmissionFilters===================
17-02-28 20:05:04.312 -08 000000065 INF: ===================Move X,Y===================
17-02-28 20:05:04.313 -08 000000065 INF: ===================Move X,Y, Parallel===================
17-02-28 20:05:04.314 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:04.315 -08 000000083 INF: ===================Move X Motor without settling===================
17-02-28 20:05:04.315 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:05:04.315 -08 000000083 INF: X Motor: Xmit PR VM\n
17-02-28 20:05:04.315 -08 000000068 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:05:04.315 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:04.317 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:05:04.318 -08 000000084 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:04.318 -08 000000084 INF: Y Motor: Moving to 64.5538 mm @25.000 mm/sec, started at 14.9061 mm
17-02-28 20:05:04.319 -08 000000084 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:04.319 -08 000000084 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:04.321 -08 000000062 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:04.321 -08 000000101 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:04.321 -08 000000097 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:04.322 -08 000000062 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:04.322 -08 000000101 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:04.322 -08 000000097 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:04.323 -08 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:04.324 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:05:04.324 -08 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:04.324 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:04.325 -08 000000039 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:05:04.325 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:04.325 -08 000000039 INF: ======================================
17-02-28 20:05:04.325 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:05:04.325 -08 000000067 INF: ===================Camera Arm TDI===================
17-02-28 20:05:04.326 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:04.326 -08 000000090 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:05:04.326 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:04.327 -08 000000039 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:05:04.327 -08 000000067 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:04.327 -08 000000039 INF: ======================================
17-02-28 20:05:04.329 -08 000000039 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:05:04.330 -08 000000039 INF: ======================================
17-02-28 20:05:04.330 -08 000000025 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:05:04.331 -08 000000099 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:05:04.331 -08 000000025 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:05:04.331 -08 000000044 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:05:04.331 -08 000000077 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:05:04.332 -08 000000099 INF: ======================================
17-02-28 20:05:04.332 -08 000000044 INF: ======================================
17-02-28 20:05:04.332 -08 000000077 INF: ======================================
17-02-28 20:05:04.333 -08 000000025 INF: ======================================
17-02-28 20:05:04.335 -08 000000062 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:04.336 -08 000000062 INF: ======================================
17-02-28 20:05:04.351 -08 000000101 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:04.353 -08 000000101 INF: ======================================
17-02-28 20:05:04.357 -08 000000097 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:04.359 -08 000000097 INF: ======================================
17-02-28 20:05:04.363 -08 000000080 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:05:04.363 -08 000000080 INF: ======================================
17-02-28 20:05:04.366 -08 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:04.369 -08 000000033 INF: ======================================
17-02-28 20:05:04.372 -08 000000054 INF: ======================================
17-02-28 20:05:04.391 -08 000000025 INF: FPGA: Recv ZSEL 
17-02-28 20:05:04.392 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:04.393 -08 000000090 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:05:04.393 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:05:04.393 -08 000000083 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:05:04.393 -08 000000084 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:04.393 -08 000000083 INF: X Motor: Xmit PR VI\n
17-02-28 20:05:04.393 -08 000000084 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:04.416 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1105 Request: {"Cycle":2,"Lane":4,"Tile":1105,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF176","HCSMMF215","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.417 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1106 Request: {"Cycle":2,"Lane":4,"Tile":1106,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF185","HCSMMF191","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.424 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1108 Request: {"Cycle":2,"Lane":4,"Tile":1108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF276","HCSMMF218","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.425 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:04.427 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1110 Request: {"Cycle":2,"Lane":4,"Tile":1110,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF202","HCSMMF242","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.428 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1107 Request: {"Cycle":2,"Lane":4,"Tile":1107,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF239","HCSMMF229","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.428 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1104 Request: {"Cycle":2,"Lane":4,"Tile":1104,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF283","HCSMMF277","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.430 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1109 Request: {"Cycle":2,"Lane":4,"Tile":1109,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF211","HCSMMF274","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.430 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1113 Request: {"Cycle":2,"Lane":4,"Tile":1113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF187","HCSMMF267","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.431 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1115 Request: {"Cycle":2,"Lane":4,"Tile":1115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF273","HCSMMF263","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.432 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1111 Request: {"Cycle":2,"Lane":4,"Tile":1111,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF183","HCSMMF195","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.432 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1112 Request: {"Cycle":2,"Lane":4,"Tile":1112,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF271","HCSMMF244","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.433 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1101 Request: {"Cycle":2,"Lane":4,"Tile":1101,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF201","HCSMMF249","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.435 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1114 Request: {"Cycle":2,"Lane":4,"Tile":1114,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF230","HCSMMF213","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.435 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1119 Request: {"Cycle":2,"Lane":4,"Tile":1119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF197","HCSMMF280","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.436 -08 000000004 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1116 Request: {"Cycle":2,"Lane":4,"Tile":1116,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF247","HCSMMF219","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.437 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1102 Request: {"Cycle":2,"Lane":4,"Tile":1102,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF265","HCSMMF264","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.437 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1118 Request: {"Cycle":2,"Lane":4,"Tile":1118,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF286","HCSMMF233","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.438 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1117 Request: {"Cycle":2,"Lane":4,"Tile":1117,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF193","HCSMMF278","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.439 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1122 Request: {"Cycle":2,"Lane":4,"Tile":1122,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF240","HCSMMF181","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.440 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1125 Request: {"Cycle":2,"Lane":4,"Tile":1125,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF214","HCSMMF226","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.441 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1124 Request: {"Cycle":2,"Lane":4,"Tile":1124,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF227","HCSMMF256","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.442 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1120 Request: {"Cycle":2,"Lane":4,"Tile":1120,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF287","HCSMMF238","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.444 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1126 Request: {"Cycle":2,"Lane":4,"Tile":1126,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF224","HCSMMF261","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.444 -08 000000064 INF: FPGA: Recv TDIBB
17-02-28 20:05:04.444 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:04.445 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1121 Request: {"Cycle":2,"Lane":4,"Tile":1121,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF237","HCSMMF184","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.446 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:05:04.446 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1123 Request: {"Cycle":2,"Lane":4,"Tile":1123,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF180","HCSMMF262","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.446 -08 000000083 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:05:04.446 -08 000000084 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:04.446 -08 000000083 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:05:04.446 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:05:04.446 -08 000000083 INF: X Motor: Moving to 78.0101 mm @15.000 mm/sec, started at 76.9126 mm
17-02-28 20:05:04.446 -08 000000083 INF: X Motor: Xmit MA 7787\n
17-02-28 20:05:04.446 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:04.448 -08 000000090 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:05:04.448 -08 000000090 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:05:04.448 -08 000000090 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:05:04.448 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1128 Request: {"Cycle":2,"Lane":4,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF212","HCSMMF182","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.449 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1127 Request: {"Cycle":2,"Lane":4,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF248","HCSMMF266","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:04.451 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.457 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:05:04.507 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:04.507 -08 000000038 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:04.507 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:04.508 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:05:04.508 -08 000000083 INF: X Motor: Recv MA 7787\r\n>
17-02-28 20:05:04.508 -08 000000084 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:04.508 -08 000000083 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:05:04.508 -08 000000084 INF: Y Motor: Set target position to 5955378 encoder counts
17-02-28 20:05:04.508 -08 000000084 INF: Y Motor: Xmit s r0xca 5955378\r
17-02-28 20:05:04.509 -08 000000090 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:05:04.509 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:04.511 -08 000000090 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:05:04.511 -08 000000090 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:05:04.511 -08 000000090 INF: Z Motor: Arming to move to -0.1165 mm
17-02-28 20:05:04.511 -08 000000090 INF: FPGA: Xmit ZYT 6435378 4\n
17-02-28 20:05:04.544 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.544 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:05:04.568 -08 000000092 INF: FPGA: Recv ZYT 
17-02-28 20:05:04.568 -08 000000090 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490613 enc / 14.906 mm / ) = 6435378 enc / 64.354 mm
17-02-28 20:05:04.568 -08 000000090 INF: FPGA: Xmit ZARM 30546\n
17-02-28 20:05:04.570 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:05:04.570 -08 000000084 INF: Y Motor: Start the move command
17-02-28 20:05:04.570 -08 000000084 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:04.581 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.587 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:05:04.634 -08 000000004 INF: FPGA: Recv ZARM
17-02-28 20:05:04.634 -08 000000090 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.9489 ms
17-02-28 20:05:04.634 -08 000000090 INF: Z Motor: ArmAbsStepped took 122.9894 ms
17-02-28 20:05:04.634 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:04.636 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:05:04.636 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:05:04.636 -08 000000084 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:05:04.636 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:04.637 -08 000000090 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:05:04.638 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:05:04.639 -08 000000090 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:05:04.639 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:05:04.641 -08 000000090 INF: ======================================
17-02-28 20:05:04.692 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.697 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:05:04.757 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:04.757 -08 000000084 INF: Y Motor: Unshifted Position: 1076842
17-02-28 20:05:04.795 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.800 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:05:04.807 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:04.821 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:04.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:04.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-02-28 20:05:04.894 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:04.921 -08 000000067 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:05:04.921 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:05:04.921 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:04.934 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:04.936 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:04.938 -08 000000067 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:05.071 -08 000000084 INF: Y Motor: Unshifted Position: 1801418
17-02-28 20:05:05.121 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:05.132 -08 000000083 INF: X Motor: Xmit PR ER\n
17-02-28 20:05:05.180 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:05:05.193 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:05.193 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:05.194 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:05.195 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:05.196 -08 000000083 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:05:05.196 -08 000000083 INF: X Motor: Moved to 78.0112 after 688 ms
17-02-28 20:05:05.196 -08 000000083 INF: ======================================
17-02-28 20:05:05.246 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:05.259 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:05.259 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB2 (8)===================
17-02-28 20:05:05.259 -08 000000018 INF: Valve A1: Go to position 8
17-02-28 20:05:05.259 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:05:05.318 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 4\r
17-02-28 20:05:05.318 -08 000000018 INF: Valve A1: 22.758 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:05:05.318 -08 000000018 INF: Valve A1: Taking longest path 'CC' from 4 to 8 to avoid 7
17-02-28 20:05:05.318 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC8\r
17-02-28 20:05:05.318 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:05:05.318 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:05:05.383 -08 000000084 INF: Y Motor: Unshifted Position: 2560631
17-02-28 20:05:05.433 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:05.536 -08 000000067 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:05:05.536 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:05:05.536 -08 000000067 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:05.552 -08 000000067 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:05.554 -08 000000067 INF: ===================Camera Arm TDI===================
17-02-28 20:05:05.556 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:05.556 -08 000000067 INF: ======================================
17-02-28 20:05:05.558 -08 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:05.559 -08 000000068 INF: ======================================
17-02-28 20:05:05.693 -08 000000084 INF: Y Motor: Unshifted Position: 3340573
17-02-28 20:05:05.743 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:05.870 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.005 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 8\r
17-02-28 20:05:06.005 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:06.005 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-02-28 20:05:06.006 -08 000000084 INF: Y Motor: Unshifted Position: 4123978
17-02-28 20:05:06.056 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.182 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.320 -08 000000084 INF: Y Motor: Unshifted Position: 4906434
17-02-28 20:05:06.370 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.494 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.631 -08 000000084 INF: Y Motor: Unshifted Position: 5699137
17-02-28 20:05:06.681 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.689 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:06.689 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:06.690 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:06.755 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:06.763 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:05:06.805 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:06.855 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:06.943 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:05:06.943 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:05:06.944 -08 000000084 INF: Y Motor: Unshifted Position: 5955380
17-02-28 20:05:06.944 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:06.944 -08 000000084 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:07.006 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:05:07.006 -08 000000084 INF: Y Motor: Moved to 64.5538 after 2369 ms
17-02-28 20:05:07.006 -08 000000084 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:07.043 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:05:07.068 -08 000000084 INF: Y Motor: Recv v 4096\r
17-02-28 20:05:07.068 -08 000000084 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:07.068 -08 000000084 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:07.129 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:07.130 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:05:07.130 -08 000000084 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:07.130 -08 000000084 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:07.192 -08 000000084 INF: Y Motor: Recv v 402653184\r
17-02-28 20:05:07.192 -08 000000084 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:05:07.192 -08 000000084 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:07.192 -08 000000084 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:07.229 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:07.254 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:05:07.254 -08 000000084 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:07.254 -08 000000084 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:07.254 -08 000000084 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:07.318 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:07.319 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:05:07.319 -08 000000084 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:07.319 -08 000000084 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:07.381 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:05:07.381 -08 000000084 INF: ======================================
17-02-28 20:05:07.382 -08 000000065 INF: ===================Move X,Y===================
17-02-28 20:05:07.383 -08 000000065 INF: ======================================
17-02-28 20:05:07.384 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:07.385 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:07.385 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:05:07.385 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:05:07.443 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:07.443 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:05:07.502 -08 000000095 INF: FPGA: Recv ZFREQCL
17-02-28 20:05:07.502 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:05:07.503 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:07.503 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:07.564 -08 000000047 INF: FPGA: Recv TDIYERD 6455380
17-02-28 20:05:07.564 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455380 counts (64.554 mm)
17-02-28 20:05:07.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:07.565 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:07.566 -08 000000068 INF: ===================TDI FPGA Arm===================
17-02-28 20:05:07.566 -08 000000057 INF: ===================Set YMotor gains for scans===================
17-02-28 20:05:07.566 -08 000000057 INF: ======================================
17-02-28 20:05:07.566 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:07.567 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:05:07.567 -08 000000068 INF: FPGA: Xmit TDIYPOS 6344453\n
17-02-28 20:05:07.568 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:07.629 -08 000000065 INF: FPGA: Recv TDIYPOS
17-02-28 20:05:07.630 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:07.630 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:07.631 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:05:07.631 -08 000000068 INF: FPGA: Xmit TDIYARM3 139264 6435378 1 1\n
17-02-28 20:05:07.694 -08 000000034 INF: FPGA: Recv TDIYARM3
17-02-28 20:05:07.694 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:07.695 -08 000000068 INF: ===================TDI FPGA Arm===================
17-02-28 20:05:07.696 -08 000000068 INF: ======================================
17-02-28 20:05:07.697 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:07.698 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:07.698 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:07.699 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:07.699 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:07.700 -08 000000064 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:05:07.700 -08 000000037 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:05:07.700 -08 000000064 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:05:07.700 -08 000000064 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:05:07.700 -08 000000064 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:05:07.700 -08 000000064 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:05:07.700 -08 000000037 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:05:07.700 -08 000000037 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:05:07.700 -08 000000037 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:05:07.703 -08 000000037 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:05:07.730 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:05:07.816 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:07.916 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:08.003 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:08.003 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:05:08.103 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP7680R\r
17-02-28 20:05:08.129 -08 000000063 INF: FPGA: Recv EX2MV
17-02-28 20:05:08.129 -08 000000063 INF: FPGA: Recv EX1MV
17-02-28 20:05:08.129 -08 000000064 INF: Excitation Filter 2: Moved -107 steps in 428.6221 ms
17-02-28 20:05:08.129 -08 000000037 INF: Excitation Filter 1: Moved -107 steps in 428.4719 ms
17-02-28 20:05:08.129 -08 000000037 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 428.6392 ms
17-02-28 20:05:08.129 -08 000000037 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 428.7092 ms
17-02-28 20:05:08.129 -08 000000064 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 428.7601 ms
17-02-28 20:05:08.129 -08 000000064 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 429.1973 ms
17-02-28 20:05:08.129 -08 000000037 INF: ======================================
17-02-28 20:05:08.130 -08 000000064 INF: ======================================
17-02-28 20:05:08.131 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:08.132 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:08.133 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:05:08.133 -08 000000044 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:08.133 -08 000000092 INF: ===================FPGA Z Wait===================
17-02-28 20:05:08.133 -08 000000034 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:08.133 -08 000000092 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:05:08.133 -08 000000034 INF: Y Motor: Moving to 14.9054 mm @6.500 mm/sec, started at 64.5538 mm
17-02-28 20:05:08.133 -08 000000034 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:08.133 -08 000000034 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:08.133 -08 000000073 INF: ===================Camera TDI, Parallel===================
17-02-28 20:05:08.134 -08 000000044 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:05:08.134 -08 000000044 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:05:08.134 -08 000000067 INF: ===================Camera TDI===================
17-02-28 20:05:08.134 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:05:08.136 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:08.136 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:08.136 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:08.136 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:08.191 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:08.192 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:05:08.192 -08 000000034 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:08.192 -08 000000034 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:08.255 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:05:08.255 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:08.286 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:08.286 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:08.287 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:08.287 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:08.291 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:08.317 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:05:08.317 -08 000000034 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:08.317 -08 000000034 INF: Y Motor: Set target position to 990544 encoder counts
17-02-28 20:05:08.317 -08 000000034 INF: Y Motor: Xmit s r0xca 990544\r
17-02-28 20:05:08.377 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:08.378 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:05:08.378 -08 000000034 INF: Y Motor: Start the move command
17-02-28 20:05:08.378 -08 000000034 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:08.436 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:08.436 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:08.437 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:08.437 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:08.442 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:05:08.442 -08 000000034 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:05:08.442 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:08.500 -08 000000025 INF: FPGA: Recv ZWAIT 
17-02-28 20:05:08.500 -08 000000092 INF: ======================================
17-02-28 20:05:08.568 -08 000000034 INF: Y Motor: Unshifted Position: 5892875
17-02-28 20:05:08.586 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:08.586 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:08.586 -08 000000077 INF: ===================Camera #2 Frame #5===================
17-02-28 20:05:08.587 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:08.587 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:08.587 -08 000000067 INF: ===================Camera #0 Frame #5===================
17-02-28 20:05:08.618 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:08.627 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:08.688 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:08.739 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:08.752 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:05:08.752 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:05:08.752 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:05:08.752 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:05:08.752 -08 000000067 INF: ===================Camera #0 Frame #11===================
17-02-28 20:05:08.752 -08 000000077 INF: ===================Camera #2 Frame #11===================
17-02-28 20:05:08.879 -08 000000034 INF: Y Motor: Unshifted Position: 5690724
17-02-28 20:05:08.920 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:05:08.920 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:05:08.920 -08 000000067 INF: ===================Camera #0 Frame #17===================
17-02-28 20:05:08.921 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:05:08.921 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:05:08.921 -08 000000077 INF: ===================Camera #2 Frame #17===================
17-02-28 20:05:08.929 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:08.938 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:09.001 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:09.054 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:09.088 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:05:09.088 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:05:09.088 -08 000000067 INF: ===================Camera #0 Frame #23===================
17-02-28 20:05:09.090 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:05:09.090 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:05:09.090 -08 000000077 INF: ===================Camera #2 Frame #23===================
17-02-28 20:05:09.190 -08 000000034 INF: Y Motor: Unshifted Position: 5486418
17-02-28 20:05:09.240 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:09.251 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:09.256 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:05:09.256 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:05:09.256 -08 000000067 INF: ===================Camera #0 Frame #29===================
17-02-28 20:05:09.259 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:05:09.259 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:05:09.259 -08 000000077 INF: ===================Camera #2 Frame #29===================
17-02-28 20:05:09.314 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:09.365 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:09.425 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:05:09.425 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:05:09.425 -08 000000067 INF: ===================Camera #0 Frame #36===================
17-02-28 20:05:09.428 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:05:09.428 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:05:09.428 -08 000000077 INF: ===================Camera #2 Frame #36===================
17-02-28 20:05:09.501 -08 000000034 INF: Y Motor: Unshifted Position: 5284263
17-02-28 20:05:09.551 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:09.564 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:09.596 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:05:09.596 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:05:09.596 -08 000000067 INF: ===================Camera #0 Frame #42===================
17-02-28 20:05:09.600 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:05:09.600 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:05:09.600 -08 000000077 INF: ===================Camera #2 Frame #42===================
17-02-28 20:05:09.624 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:09.675 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:09.765 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:05:09.765 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:05:09.765 -08 000000067 INF: ===================Camera #0 Frame #48===================
17-02-28 20:05:09.769 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:05:09.769 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:05:09.769 -08 000000077 INF: ===================Camera #2 Frame #48===================
17-02-28 20:05:09.813 -08 000000034 INF: Y Motor: Unshifted Position: 5079938
17-02-28 20:05:09.863 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:09.874 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:09.935 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:05:09.935 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:05:09.935 -08 000000067 INF: ===================Camera #0 Frame #54===================
17-02-28 20:05:09.938 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:09.940 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:05:09.940 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:05:09.940 -08 000000077 INF: ===================Camera #2 Frame #54===================
17-02-28 20:05:09.989 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.103 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:05:10.103 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:05:10.103 -08 000000067 INF: ===================Camera #0 Frame #60===================
17-02-28 20:05:10.109 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:05:10.109 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:05:10.109 -08 000000077 INF: ===================Camera #2 Frame #61===================
17-02-28 20:05:10.125 -08 000000034 INF: Y Motor: Unshifted Position: 4878442
17-02-28 20:05:10.175 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.188 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:10.248 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:10.273 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:05:10.273 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:05:10.273 -08 000000067 INF: ===================Camera #0 Frame #67===================
17-02-28 20:05:10.282 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:05:10.282 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:05:10.282 -08 000000077 INF: ===================Camera #2 Frame #67===================
17-02-28 20:05:10.299 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.436 -08 000000034 INF: Y Motor: Unshifted Position: 4675210
17-02-28 20:05:10.446 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:05:10.446 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:05:10.446 -08 000000067 INF: ===================Camera #0 Frame #73===================
17-02-28 20:05:10.453 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:05:10.453 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:05:10.453 -08 000000077 INF: ===================Camera #2 Frame #73===================
17-02-28 20:05:10.486 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.498 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:10.561 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:10.612 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.614 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:05:10.614 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:05:10.614 -08 000000067 INF: ===================Camera #0 Frame #79===================
17-02-28 20:05:10.622 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:05:10.622 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:05:10.622 -08 000000077 INF: ===================Camera #2 Frame #80===================
17-02-28 20:05:10.750 -08 000000034 INF: Y Motor: Unshifted Position: 4473049
17-02-28 20:05:10.784 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:05:10.784 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:05:10.784 -08 000000067 INF: ===================Camera #0 Frame #86===================
17-02-28 20:05:10.796 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:05:10.796 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:05:10.796 -08 000000077 INF: ===================Camera #2 Frame #86===================
17-02-28 20:05:10.800 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.811 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:10.874 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:10.925 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:10.956 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:05:10.956 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:05:10.956 -08 000000067 INF: ===================Camera #0 Frame #92===================
17-02-28 20:05:10.966 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:05:10.966 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:05:10.966 -08 000000077 INF: ===================Camera #2 Frame #92===================
17-02-28 20:05:11.062 -08 000000034 INF: Y Motor: Unshifted Position: 4268954
17-02-28 20:05:11.112 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:11.124 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:11.126 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:05:11.126 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:05:11.126 -08 000000067 INF: ===================Camera #0 Frame #98===================
17-02-28 20:05:11.137 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:05:11.137 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:05:11.137 -08 000000077 INF: ===================Camera #2 Frame #99===================
17-02-28 20:05:11.184 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:11.236 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:11.295 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:05:11.295 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:05:11.295 -08 000000067 INF: ===================Camera #0 Frame #104===================
17-02-28 20:05:11.310 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:05:11.310 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:05:11.310 -08 000000077 INF: ===================Camera #2 Frame #105===================
17-02-28 20:05:11.373 -08 000000034 INF: Y Motor: Unshifted Position: 4065926
17-02-28 20:05:11.423 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:11.434 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:11.464 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:05:11.464 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:05:11.464 -08 000000067 INF: ===================Camera #0 Frame #111===================
17-02-28 20:05:11.480 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:05:11.480 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:05:11.480 -08 000000077 INF: ===================Camera #2 Frame #111===================
17-02-28 20:05:11.498 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:11.549 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:11.637 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:05:11.637 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:05:11.637 -08 000000067 INF: ===================Camera #0 Frame #117===================
17-02-28 20:05:11.651 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:05:11.651 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:05:11.651 -08 000000077 INF: ===================Camera #2 Frame #117===================
17-02-28 20:05:11.685 -08 000000034 INF: Y Motor: Unshifted Position: 3864430
17-02-28 20:05:11.735 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:11.748 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:11.807 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:05:11.807 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:05:11.807 -08 000000067 INF: ===================Camera #0 Frame #123===================
17-02-28 20:05:11.810 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:11.822 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:05:11.822 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:05:11.822 -08 000000077 INF: ===================Camera #2 Frame #124===================
17-02-28 20:05:11.861 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:11.975 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:05:11.975 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:05:11.975 -08 000000067 INF: ===================Camera #0 Frame #129===================
17-02-28 20:05:11.994 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:05:11.994 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:05:11.994 -08 000000077 INF: ===================Camera #2 Frame #130===================
17-02-28 20:05:11.996 -08 000000034 INF: Y Motor: Unshifted Position: 3661409
17-02-28 20:05:12.046 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.060 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:12.121 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:12.143 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:05:12.143 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:05:12.143 -08 000000067 INF: ===================Camera #0 Frame #136===================
17-02-28 20:05:12.165 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:05:12.165 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:05:12.165 -08 000000077 INF: ===================Camera #2 Frame #136===================
17-02-28 20:05:12.172 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.308 -08 000000034 INF: Y Motor: Unshifted Position: 3458615
17-02-28 20:05:12.316 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:05:12.316 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:05:12.316 -08 000000067 INF: ===================Camera #0 Frame #142===================
17-02-28 20:05:12.336 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:05:12.336 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:05:12.336 -08 000000077 INF: ===================Camera #2 Frame #143===================
17-02-28 20:05:12.358 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.371 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:12.434 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:12.485 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.486 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:05:12.486 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:05:12.486 -08 000000067 INF: ===================Camera #0 Frame #148===================
17-02-28 20:05:12.511 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:05:12.511 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:05:12.511 -08 000000077 INF: ===================Camera #2 Frame #149===================
17-02-28 20:05:12.620 -08 000000034 INF: Y Motor: Unshifted Position: 3254298
17-02-28 20:05:12.656 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:05:12.656 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:05:12.656 -08 000000067 INF: ===================Camera #0 Frame #154===================
17-02-28 20:05:12.670 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.682 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:05:12.682 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:05:12.682 -08 000000077 INF: ===================Camera #2 Frame #155===================
17-02-28 20:05:12.684 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:12.745 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:12.796 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.826 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:05:12.826 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:05:12.826 -08 000000067 INF: ===================Camera #0 Frame #161===================
17-02-28 20:05:12.852 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:05:12.852 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:05:12.852 -08 000000077 INF: ===================Camera #2 Frame #162===================
17-02-28 20:05:12.934 -08 000000034 INF: Y Motor: Unshifted Position: 3052799
17-02-28 20:05:12.984 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:12.995 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:12.999 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:05:12.999 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:05:12.999 -08 000000067 INF: ===================Camera #0 Frame #167===================
17-02-28 20:05:13.026 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:05:13.026 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:05:13.026 -08 000000077 INF: ===================Camera #2 Frame #168===================
17-02-28 20:05:13.057 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:13.107 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:13.169 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:05:13.169 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:05:13.169 -08 000000067 INF: ===================Camera #0 Frame #173===================
17-02-28 20:05:13.196 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:05:13.196 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:05:13.196 -08 000000077 INF: ===================Camera #2 Frame #174===================
17-02-28 20:05:13.307 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:13.309 -08 000000034 INF: Y Motor: Unshifted Position: 2847188
17-02-28 20:05:13.338 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:05:13.338 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:05:13.338 -08 000000067 INF: ===================Camera #0 Frame #180===================
17-02-28 20:05:13.359 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:13.372 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:13.475 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 184, frameCount = 185.
17-02-28 20:05:13.475 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 185
17-02-28 20:05:13.475 -08 000000077 INF: ===================Camera #2 Frame #185===================
17-02-28 20:05:13.484 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:13.511 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:05:13.511 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:05:13.511 -08 000000067 INF: ===================Camera #0 Frame #186===================
17-02-28 20:05:13.621 -08 000000034 INF: Y Motor: Unshifted Position: 2605390
17-02-28 20:05:13.622 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:13.663 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:05:13.663 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:05:13.663 -08 000000077 INF: ===================Camera #2 Frame #192===================
17-02-28 20:05:13.671 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:13.681 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:05:13.681 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:05:13.681 -08 000000067 INF: ===================Camera #0 Frame #192===================
17-02-28 20:05:13.682 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:13.795 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:13.836 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:05:13.836 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:05:13.836 -08 000000077 INF: ===================Camera #2 Frame #198===================
17-02-28 20:05:13.851 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:05:13.851 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:05:13.851 -08 000000067 INF: ===================Camera #0 Frame #198===================
17-02-28 20:05:13.932 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:13.933 -08 000000034 INF: Y Motor: Unshifted Position: 2403669
17-02-28 20:05:13.983 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:13.992 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:13.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:13.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:13.993 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:05:13.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:05:14.006 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-02-28 20:05:14.006 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-02-28 20:05:14.006 -08 000000077 INF: ===================Camera #2 Frame #204===================
17-02-28 20:05:14.020 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:05:14.020 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:05:14.020 -08 000000067 INF: ===================Camera #0 Frame #205===================
17-02-28 20:05:14.105 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:14.176 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210.
17-02-28 20:05:14.176 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210
17-02-28 20:05:14.176 -08 000000077 INF: ===================Camera #2 Frame #210===================
17-02-28 20:05:14.193 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:05:14.193 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:05:14.193 -08 000000067 INF: ===================Camera #0 Frame #211===================
17-02-28 20:05:14.245 -08 000000034 INF: Y Motor: Unshifted Position: 2200663
17-02-28 20:05:14.295 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:14.346 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:05:14.346 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:05:14.346 -08 000000077 INF: ===================Camera #2 Frame #217===================
17-02-28 20:05:14.363 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:05:14.363 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:05:14.363 -08 000000067 INF: ===================Camera #0 Frame #217===================
17-02-28 20:05:14.419 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:14.520 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:05:14.520 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:05:14.520 -08 000000077 INF: ===================Camera #2 Frame #223===================
17-02-28 20:05:14.532 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:05:14.532 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:05:14.532 -08 000000067 INF: ===================Camera #0 Frame #224===================
17-02-28 20:05:14.556 -08 000000034 INF: Y Motor: Unshifted Position: 1997206
17-02-28 20:05:14.606 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:14.690 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 228, frameCount = 229.
17-02-28 20:05:14.690 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 229
17-02-28 20:05:14.690 -08 000000077 INF: ===================Camera #2 Frame #229===================
17-02-28 20:05:14.704 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:05:14.704 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:05:14.704 -08 000000067 INF: ===================Camera #0 Frame #230===================
17-02-28 20:05:14.729 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:14.860 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:05:14.860 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:05:14.860 -08 000000077 INF: ===================Camera #2 Frame #236===================
17-02-28 20:05:14.869 -08 000000034 INF: Y Motor: Unshifted Position: 1794847
17-02-28 20:05:14.873 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:05:14.873 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:05:14.873 -08 000000067 INF: ===================Camera #0 Frame #236===================
17-02-28 20:05:14.919 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:14.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:14.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:05:15.034 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:05:15.034 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:05:15.034 -08 000000077 INF: ===================Camera #2 Frame #242===================
17-02-28 20:05:15.043 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:05:15.043 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:05:15.043 -08 000000067 INF: ===================Camera #0 Frame #242===================
17-02-28 20:05:15.045 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.179 -08 000000034 INF: Y Motor: Unshifted Position: 1591395
17-02-28 20:05:15.204 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:05:15.204 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:05:15.204 -08 000000077 INF: ===================Camera #2 Frame #248===================
17-02-28 20:05:15.212 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:05:15.212 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:05:15.212 -08 000000067 INF: ===================Camera #0 Frame #249===================
17-02-28 20:05:15.229 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.353 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.374 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:05:15.374 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:05:15.374 -08 000000077 INF: ===================Camera #2 Frame #255===================
17-02-28 20:05:15.384 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:05:15.384 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:05:15.384 -08 000000067 INF: ===================Camera #0 Frame #255===================
17-02-28 20:05:15.493 -08 000000034 INF: Y Motor: Unshifted Position: 1389250
17-02-28 20:05:15.543 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.547 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:05:15.547 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:05:15.547 -08 000000077 INF: ===================Camera #2 Frame #261===================
17-02-28 20:05:15.552 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:05:15.552 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:05:15.552 -08 000000067 INF: ===================Camera #0 Frame #261===================
17-02-28 20:05:15.666 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.716 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:05:15.716 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:05:15.716 -08 000000077 INF: ===================Camera #2 Frame #267===================
17-02-28 20:05:15.720 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:05:15.720 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:05:15.720 -08 000000067 INF: ===================Camera #0 Frame #267===================
17-02-28 20:05:15.805 -08 000000034 INF: Y Motor: Unshifted Position: 1186229
17-02-28 20:05:15.855 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.865 -08 000000039 INF: FPGA: Recv TDIYWAIT
17-02-28 20:05:15.866 -08 000000044 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:15.867 -08 000000044 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:05:15.868 -08 000000037 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:05:15.868 -08 000000095 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:05:15.868 -08 000000037 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:05:15.868 -08 000000037 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:05:15.868 -08 000000037 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:05:15.868 -08 000000037 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:05:15.868 -08 000000095 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:05:15.868 -08 000000095 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:05:15.868 -08 000000095 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:05:15.871 -08 000000095 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:05:15.885 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:15.885 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:15.885 -08 000000077 INF: ===================Camera #2 Frame #272===================
17-02-28 20:05:15.888 -08 000000067 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:15.888 -08 000000067 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:15.888 -08 000000067 INF: ===================Camera #0 Frame #272===================
17-02-28 20:05:15.901 -08 000000077 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:15.902 -08 000000077 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:15.903 -08 000000067 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:15.904 -08 000000067 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:15.979 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:15.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:15.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:05:16.083 -08 000000077 INF: Camera #2 ReleaseBuffer
17-02-28 20:05:16.083 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:05:16.111 -08 000000077 INF: ======================================
17-02-28 20:05:16.115 -08 000000034 INF: Y Motor: Unshifted Position: 992640
17-02-28 20:05:16.165 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:16.202 -08 000000067 INF: Camera #0 ReleaseBuffer
17-02-28 20:05:16.202 -08 000000067 INF: ===================Camera TDI===================
17-02-28 20:05:16.234 -08 000000067 INF: ======================================
17-02-28 20:05:16.235 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:05:16.236 -08 000000073 INF: ======================================
17-02-28 20:05:16.304 -08 000000084 INF: FPGA: Recv EX1MV
17-02-28 20:05:16.304 -08 000000084 INF: FPGA: Recv EX2MV
17-02-28 20:05:16.304 -08 000000095 INF: Excitation Filter 2: Moved 107 steps in 434.4618 ms
17-02-28 20:05:16.304 -08 000000037 INF: Excitation Filter 1: Moved 107 steps in 434.6846 ms
17-02-28 20:05:16.304 -08 000000037 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 434.782 ms
17-02-28 20:05:16.304 -08 000000037 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 434.8504 ms
17-02-28 20:05:16.304 -08 000000095 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 434.5709 ms
17-02-28 20:05:16.304 -08 000000095 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 434.9803 ms
17-02-28 20:05:16.304 -08 000000037 INF: ======================================
17-02-28 20:05:16.305 -08 000000095 INF: ======================================
17-02-28 20:05:16.306 -08 000000034 INF: Y Motor: Unshifted Position: 990543
17-02-28 20:05:16.306 -08 000000044 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:16.306 -08 000000034 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:16.306 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:16.307 -08 000000044 INF: ======================================
17-02-28 20:05:16.365 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:05:16.365 -08 000000034 INF: Y Motor: Moved to 14.9054 after 7922 ms
17-02-28 20:05:16.365 -08 000000034 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:16.430 -08 000000034 INF: Y Motor: Recv v 4097\r
17-02-28 20:05:16.430 -08 000000034 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:16.430 -08 000000034 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:16.492 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:05:16.492 -08 000000034 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:16.492 -08 000000034 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:16.554 -08 000000034 INF: Y Motor: Recv v 134217728\r
17-02-28 20:05:16.554 -08 000000034 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:05:16.554 -08 000000034 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:16.554 -08 000000034 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:16.617 -08 000000034 INF: Y Motor: Recv v 0\r
17-02-28 20:05:16.617 -08 000000034 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:16.617 -08 000000034 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:16.617 -08 000000034 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:16.679 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:05:16.679 -08 000000034 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:16.679 -08 000000034 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:16.743 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:05:16.743 -08 000000034 INF: ======================================
17-02-28 20:05:16.744 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:16.745 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:16.746 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:16.746 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:05:16.801 -08 000000078 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:05:16.801 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:16.865 -08 000000038 INF: FPGA: Recv TDIYERD 1490545
17-02-28 20:05:16.865 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:05:16.925 -08 000000037 INF: FPGA: Recv ZADCR 35509
17-02-28 20:05:16.925 -08 000000042 INF: At scan end Y pos = 14.905 and Z pos = -0.136. Y moved -48.539 mm
17-02-28 20:05:16.925 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:05:16.988 -08 000000090 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:05:16.988 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:05:16.988 -08 000000042 INF: TDIScan finished after 12759.9775 ms
17-02-28 20:05:16.988 -08 000000042 INF: Image[0]: Y should trigger at 63.445 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:05:16.988 -08 000000042 INF: Image[2]: Y should trigger at 63.445 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:05:16.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:16.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:16.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:05:17.022 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.859 um
17-02-28 20:05:17.023 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.023 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:05:17.052 -08 000000102 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:05:17.053 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.053 -08 000000040 INF: ===================Dither Clean Up Command===================
17-02-28 20:05:17.053 -08 000000047 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:05:17.053 -08 000000083 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:05:17.053 -08 000000033 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:05:17.054 -08 000000033 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:05:17.054 -08 000000047 INF: ======================================
17-02-28 20:05:17.054 -08 000000033 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:05:17.054 -08 000000083 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:17.054 -08 000000083 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:17.054 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:17.054 -08 000000054 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:05:17.054 -08 000000054 INF: ======================================
17-02-28 20:05:17.055 -08 000000090 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:05:17.114 -08 000000070 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:17.114 -08 000000070 INF: FPGA: Recv ZSEL 
17-02-28 20:05:17.114 -08 000000090 INF: FPGA: Xmit ZDACW 41032\n
17-02-28 20:05:17.114 -08 000000033 INF: ======================================
17-02-28 20:05:17.116 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:17.116 -08 000000083 INF: ======================================
17-02-28 20:05:17.176 -08 000000102 INF: FPGA: Recv ZDACW 
17-02-28 20:05:17.176 -08 000000090 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:05:17.177 -08 000000090 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:05:17.238 -08 000000037 INF: FPGA: Recv TDIBB
17-02-28 20:05:17.238 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:17.239 -08 000000090 INF: ======================================
17-02-28 20:05:17.240 -08 000000040 INF: ======================================
17-02-28 20:05:17.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:05:17.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:05:17.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:05:17.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:05:17.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:17.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:05:17.244 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:05:17.244 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:05:17.244 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:05:17.245 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:05:17.245 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:05:17.267 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:05:17.267 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:05:17.268 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.268 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:05:17.268 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:05:17.268 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 4===================
17-02-28 20:05:17.269 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface===================
17-02-28 20:05:17.324 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.327 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:17.327 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:17.342 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1204 Request: {"Cycle":2,"Lane":4,"Tile":1204,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF268","HCSMMF212","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.416 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:17.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.417 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:05:17.417 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:05:17.425 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1205 Request: {"Cycle":2,"Lane":4,"Tile":1205,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF237","HCSMMF284","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.507 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1206 Request: {"Cycle":2,"Lane":4,"Tile":1206,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF225","HCSMMF194","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.514 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1202 Request: {"Cycle":2,"Lane":4,"Tile":1202,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF180","HCSMMF206","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.517 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1213 Request: {"Cycle":2,"Lane":4,"Tile":1213,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF283","HCSMMF238","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.519 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1210 Request: {"Cycle":2,"Lane":4,"Tile":1210,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF247","HCSMMF220","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.521 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1212 Request: {"Cycle":2,"Lane":4,"Tile":1212,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF274","HCSMMF267","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.523 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1208 Request: {"Cycle":2,"Lane":4,"Tile":1208,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF280","HCSMMF209","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.525 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1215 Request: {"Cycle":2,"Lane":4,"Tile":1215,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF241","HCSMMF240","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.527 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1209 Request: {"Cycle":2,"Lane":4,"Tile":1209,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF226","HCSMMF205","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.529 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1207 Request: {"Cycle":2,"Lane":4,"Tile":1207,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF190","HCSMMF182","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.530 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1214 Request: {"Cycle":2,"Lane":4,"Tile":1214,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF179","HCSMMF227","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.532 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1201 Request: {"Cycle":2,"Lane":4,"Tile":1201,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF266","HCSMMF262","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.534 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1216 Request: {"Cycle":2,"Lane":4,"Tile":1216,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF177","HCSMMF242","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.535 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1217 Request: {"Cycle":2,"Lane":4,"Tile":1217,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF183","HCSMMF279","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.536 -08 000000093 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1224 Request: {"Cycle":2,"Lane":4,"Tile":1224,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF239","HCSMMF229","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.537 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1220 Request: {"Cycle":2,"Lane":4,"Tile":1220,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF203","HCSMMF202","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.539 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1222 Request: {"Cycle":2,"Lane":4,"Tile":1222,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF261","HCSMMF249","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.540 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1203 Request: {"Cycle":2,"Lane":4,"Tile":1203,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF281","HCSMMF214","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.542 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1223 Request: {"Cycle":2,"Lane":4,"Tile":1223,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF217","HCSMMF204","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.543 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1211 Request: {"Cycle":2,"Lane":4,"Tile":1211,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF210","HCSMMF216","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.544 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1225 Request: {"Cycle":2,"Lane":4,"Tile":1225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF215","HCSMMF176","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.546 -08 000000004 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1218 Request: {"Cycle":2,"Lane":4,"Tile":1218,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF195","HCSMMF270","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.547 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1228 Request: {"Cycle":2,"Lane":4,"Tile":1228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF236","HCSMMF198","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.548 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1227 Request: {"Cycle":2,"Lane":4,"Tile":1227,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF207","HCSMMF231","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.549 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1219 Request: {"Cycle":2,"Lane":4,"Tile":1219,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF259","HCSMMF252","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.552 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1226 Request: {"Cycle":2,"Lane":4,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF218","HCSMMF276","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.552 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 2 Tile: 1221 Request: {"Cycle":2,"Lane":4,"Tile":1221,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF185","HCSMMF275","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:17.555 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.561 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:05:17.652 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.652 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:05:17.688 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.694 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:05:17.775 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.781 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:05:17.817 -08 000000029 INF: FPGA: Recv MIOCOMPR
17-02-28 20:05:17.817 -08 000000042 INF: Compensator: Moved OutOfPath in 399 ms
17-02-28 20:05:17.817 -08 000000042 INF: Lane 5, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:05:17.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.820 -08 000000004 INF: ===================Move Tilt Motor 1===================
17-02-28 20:05:17.820 -08 000000036 INF: ===================Move Tilt Motor 2===================
17-02-28 20:05:17.820 -08 000000063 INF: ===================Move Tilt Motor 3===================
17-02-28 20:05:17.820 -08 000000004 INF: ======================================
17-02-28 20:05:17.820 -08 000000063 INF: ======================================
17-02-28 20:05:17.821 -08 000000036 INF: ======================================
17-02-28 20:05:17.822 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.823 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:17.829 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:05:17.838 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:05:17.838 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:05:17.838 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:05:17.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:17.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:17.842 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:05:17.842 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:05:17.842 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:05:17.860 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.866 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:05:17.878 -08 000000099 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:17.878 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:17.878 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:05:17.879 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1565 mm
17-02-28 20:05:17.879 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:05:17.940 -08 000000034 INF: FPGA: Recv ZTRG 
17-02-28 20:05:17.940 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:05:17.951 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:17.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:17.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:05:18.002 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:05:18.002 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:05:18.002 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:05:18.064 -08 000000070 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:05:18.064 -08 000000070 INF: FPGA: Recv ZMV 
17-02-28 20:05:18.064 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:05:18.064 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.7142 ms
17-02-28 20:05:18.064 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:05:18.126 -08 000000037 INF: FPGA: Recv ZDACR 60292
17-02-28 20:05:18.126 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.406 ms w/comms
17-02-28 20:05:18.126 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:05:18.126 -08 000000042 INF: Z Motor: MoveAbsStepped took 247.5828 ms
17-02-28 20:05:18.126 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:18.127 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:05:18.136 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:05:18.136 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:18.136 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:18.136 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:05:18.136 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:05:18.191 -08 000000047 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:18.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:18.201 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:05:18.210 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:05:18.210 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:18.210 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:18.212 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:18.212 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:05:18.212 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:18.212 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = E_1
17-02-28 20:05:18.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:18.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:18.214 -08 000000094 INF: ===================Move X,Y===================
17-02-28 20:05:18.214 -08 000000100 INF: ===================MoveEmissionFilters===================
17-02-28 20:05:18.215 -08 000000094 INF: ===================Move X,Y, Parallel===================
17-02-28 20:05:18.215 -08 000000101 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:18.215 -08 000000037 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:18.215 -08 000000033 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:18.215 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:18.216 -08 000000092 INF: ===================Move X Motor without settling===================
17-02-28 20:05:18.216 -08 000000093 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:18.216 -08 000000092 INF: X Motor: Xmit PR VM\n
17-02-28 20:05:18.216 -08 000000101 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:18.216 -08 000000093 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9054 mm
17-02-28 20:05:18.216 -08 000000037 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:18.216 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:18.216 -08 000000093 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:18.216 -08 000000093 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:18.216 -08 000000033 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:18.217 -08 000000083 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:05:18.217 -08 000000059 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:05:18.217 -08 000000039 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:05:18.217 -08 000000062 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:05:18.217 -08 000000059 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:05:18.217 -08 000000051 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:05:18.217 -08 000000099 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:05:18.217 -08 000000085 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:05:18.217 -08 000000080 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:05:18.217 -08 000000059 INF: ======================================
17-02-28 20:05:18.218 -08 000000080 INF: ======================================
17-02-28 20:05:18.218 -08 000000062 INF: ======================================
17-02-28 20:05:18.218 -08 000000085 INF: ======================================
17-02-28 20:05:18.218 -08 000000039 INF: ======================================
17-02-28 20:05:18.218 -08 000000099 INF: ======================================
17-02-28 20:05:18.219 -08 000000033 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:18.220 -08 000000037 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:18.220 -08 000000083 INF: ======================================
17-02-28 20:05:18.220 -08 000000051 INF: ======================================
17-02-28 20:05:18.221 -08 000000033 INF: ======================================
17-02-28 20:05:18.221 -08 000000037 INF: ======================================
17-02-28 20:05:18.221 -08 000000101 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:18.221 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:18.222 -08 000000101 INF: ======================================
17-02-28 20:05:18.223 -08 000000036 INF: ======================================
17-02-28 20:05:18.224 -08 000000100 INF: ======================================
17-02-28 20:05:18.235 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:05:18.256 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:05:18.256 -08 000000093 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:18.256 -08 000000093 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:18.257 -08 000000092 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:05:18.257 -08 000000092 INF: X Motor: Xmit PR VI\n
17-02-28 20:05:18.317 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:05:18.317 -08 000000093 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:18.320 -08 000000092 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:05:18.320 -08 000000092 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:05:18.320 -08 000000092 INF: X Motor: Moving to 80.2456 mm @15.000 mm/sec, started at 78.0112 mm
17-02-28 20:05:18.321 -08 000000092 INF: X Motor: Xmit MA 8702\n
17-02-28 20:05:18.377 -08 000000093 INF: Y Motor: Recv v 0\r
17-02-28 20:05:18.377 -08 000000093 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:18.377 -08 000000092 INF: X Motor: Recv MA 8702\r\n>
17-02-28 20:05:18.377 -08 000000093 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:05:18.377 -08 000000093 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:05:18.377 -08 000000092 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:05:18.444 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:05:18.444 -08 000000093 INF: Y Motor: Start the move command
17-02-28 20:05:18.444 -08 000000093 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:18.506 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:05:18.506 -08 000000093 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:05:18.506 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:18.628 -08 000000093 INF: Y Motor: Unshifted Position: 1069538
17-02-28 20:05:18.678 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:18.803 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:18.939 -08 000000093 INF: Y Motor: Unshifted Position: 1769699
17-02-28 20:05:18.989 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:18.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:18.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 0 of 5 seconds left===================
17-02-28 20:05:18.995 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:18.995 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:18.995 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:05:18.995 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:19.001 -08 000000092 INF: X Motor: Xmit PR ER\n
17-02-28 20:05:19.066 -08 000000092 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:05:19.066 -08 000000092 INF: X Motor: Moved to 80.2451 after 689 ms
17-02-28 20:05:19.066 -08 000000092 INF: ======================================
17-02-28 20:05:19.093 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:19.116 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:19.189 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF)
17-02-28 20:05:19.189 -08 000000018 INF: Current Position of Pump is: 7680
17-02-28 20:05:19.252 -08 000000093 INF: Y Motor: Unshifted Position: 2557236
17-02-28 20:05:19.289 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:19.302 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:19.375 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF)
17-02-28 20:05:19.375 -08 000000018 INF: Current Position of Pump is: 7680
17-02-28 20:05:19.375 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:05:19.426 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:19.475 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD7680R\r
17-02-28 20:05:19.562 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:19.563 -08 000000093 INF: Y Motor: Unshifted Position: 3338004
17-02-28 20:05:19.613 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:19.662 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:19.740 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:19.751 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:19.876 -08 000000093 INF: Y Motor: Unshifted Position: 4113914
17-02-28 20:05:19.926 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.001 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:20.052 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.061 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:20.190 -08 000000093 INF: Y Motor: Unshifted Position: 4898843
17-02-28 20:05:20.240 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.311 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:20.363 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.375 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:20.500 -08 000000093 INF: Y Motor: Unshifted Position: 5673596
17-02-28 20:05:20.550 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.625 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:20.674 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.686 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:20.811 -08 000000093 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:05:20.861 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:20.936 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:20.999 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:20.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:05:20.999 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:05:21.000 -08 000000093 INF: Y Motor: Unshifted Position: 5953352
17-02-28 20:05:21.000 -08 000000093 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:21.000 -08 000000093 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:21.062 -08 000000093 INF: Y Motor: Recv v 0\r
17-02-28 20:05:21.062 -08 000000093 INF: Y Motor: Moved to 64.5335 after 2556 ms
17-02-28 20:05:21.062 -08 000000093 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:21.124 -08 000000093 INF: Y Motor: Recv v 4096\r
17-02-28 20:05:21.124 -08 000000093 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:21.124 -08 000000093 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:21.188 -08 000000093 INF: Y Motor: Recv v 0\r
17-02-28 20:05:21.188 -08 000000093 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:21.188 -08 000000093 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:21.248 -08 000000093 INF: Y Motor: Recv v 402653184\r
17-02-28 20:05:21.248 -08 000000093 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:05:21.248 -08 000000093 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:21.248 -08 000000093 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:21.310 -08 000000093 INF: Y Motor: Recv v 0\r
17-02-28 20:05:21.310 -08 000000093 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:21.310 -08 000000093 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:21.310 -08 000000093 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:21.376 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:05:21.376 -08 000000093 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:21.376 -08 000000093 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:21.435 -08 000000093 INF: Y Motor: Recv ok\r
17-02-28 20:05:21.435 -08 000000093 INF: ======================================
17-02-28 20:05:21.437 -08 000000094 INF: ===================Move X,Y===================
17-02-28 20:05:21.438 -08 000000094 INF: ======================================
17-02-28 20:05:21.439 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:21.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:21.440 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:05:21.440 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:05:21.498 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:21.498 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:05:21.560 -08 000000004 INF: FPGA: Recv ZFREQCL
17-02-28 20:05:21.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:05:21.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:21.561 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:21.622 -08 000000039 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:05:21.622 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:05:21.622 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:21.623 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:21.624 -08 000000068 INF: ===================Set YMotor gains for scans===================
17-02-28 20:05:21.624 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:05:21.624 -08 000000068 INF: ======================================
17-02-28 20:05:21.625 -08 000000099 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:05:21.625 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:05:21.627 -08 000000099 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:05:21.627 -08 000000099 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:05:21.627 -08 000000099 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:05:21.684 -08 000000004 INF: FPGA: Recv TDIYPOS
17-02-28 20:05:21.685 -08 000000099 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:05:21.686 -08 000000099 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:05:21.686 -08 000000099 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:05:21.747 -08 000000029 INF: FPGA: Recv TDIYARM2
17-02-28 20:05:21.747 -08 000000099 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:05:21.749 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:05:21.750 -08 000000099 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:05:21.750 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:05:21.752 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:05:21.752 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:05:21.753 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:22.099 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:05:22.119 -08 000000099 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:05:22.119 -08 000000099 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:05:22.119 -08 000000099 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:22.134 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:05:22.136 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:22.185 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:22.285 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:22.371 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:22.519 -08 000000099 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:05:22.519 -08 000000099 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:05:22.519 -08 000000099 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:22.534 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:05:22.536 -08 000000099 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:05:22.537 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:05:22.538 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:22.539 -08 000000099 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:05:22.539 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:22.541 -08 000000099 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:05:22.541 -08 000000099 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:05:22.541 -08 000000099 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:05:22.541 -08 000000099 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:05:22.556 -08 000000065 INF: FPGA: Recv ZYT 
17-02-28 20:05:22.556 -08 000000099 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:05:22.556 -08 000000099 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:05:22.618 -08 000000063 INF: FPGA: Recv ZARM
17-02-28 20:05:22.618 -08 000000099 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0295 ms
17-02-28 20:05:22.618 -08 000000099 INF: Z Motor: ArmAbsStepped took 77.2156 ms
17-02-28 20:05:22.618 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:22.620 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:05:22.621 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:22.621 -08 000000099 INF: ======================================
17-02-28 20:05:22.622 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:22.623 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:22.623 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:22.624 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:22.624 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:22.625 -08 000000025 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:05:22.625 -08 000000070 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:05:22.625 -08 000000025 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:05:22.625 -08 000000025 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:05:22.625 -08 000000025 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:05:22.625 -08 000000070 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:05:22.625 -08 000000025 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:05:22.625 -08 000000070 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:05:22.625 -08 000000070 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:05:22.628 -08 000000070 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:05:22.684 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:22.684 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:22.684 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-02-28 20:05:23.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:23.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:23.056 -08 000000090 INF: FPGA: Recv EX2MV
17-02-28 20:05:23.056 -08 000000090 INF: FPGA: Recv EX1MV
17-02-28 20:05:23.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:05:23.056 -08 000000070 INF: Excitation Filter 1: Moved -107 steps in 430.5727 ms
17-02-28 20:05:23.056 -08 000000025 INF: Excitation Filter 2: Moved -107 steps in 430.7624 ms
17-02-28 20:05:23.056 -08 000000070 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 430.7381 ms
17-02-28 20:05:23.056 -08 000000025 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 430.8666 ms
17-02-28 20:05:23.056 -08 000000025 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 430.9696 ms
17-02-28 20:05:23.056 -08 000000070 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 430.8472 ms
17-02-28 20:05:23.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:05:23.056 -08 000000025 INF: ======================================
17-02-28 20:05:23.056 -08 000000070 INF: ======================================
17-02-28 20:05:23.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:23.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:23.058 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:23.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:23.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:05:23.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:05:23.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°, FC temperature to 60°===================
17-02-28 20:05:23.059 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:23.060 -08 000000064 INF: ===================Serial===================
17-02-28 20:05:23.060 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:05:23.060 -08 000000063 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:23.060 -08 000000062 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:23.060 -08 000000062 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:05:23.060 -08 000000062 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:23.060 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:23.061 -08 000000064 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:05:23.061 -08 000000069 INF: ===================Camera TDI, Parallel===================
17-02-28 20:05:23.061 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:05:23.061 -08 000000063 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:05:23.061 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:05:23.062 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:05:23.062 -08 000000063 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:05:23.062 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.062 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.063 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.063 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.120 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:05:23.120 -08 000000062 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:23.120 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:23.182 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:05:23.182 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:23.213 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.213 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.213 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.213 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.244 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:05:23.244 -08 000000062 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:23.244 -08 000000062 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:05:23.244 -08 000000062 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:05:23.309 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:05:23.309 -08 000000062 INF: Y Motor: Start the move command
17-02-28 20:05:23.309 -08 000000062 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:23.363 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.363 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.363 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.363 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.371 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:05:23.371 -08 000000062 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:05:23.371 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:23.495 -08 000000062 INF: Y Motor: Unshifted Position: 5935377
17-02-28 20:05:23.513 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.513 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:23.513 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.513 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:23.545 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:23.556 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:05:23.556 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:05:23.557 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:05:23.557 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:05:23.558 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:23.558 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:23.558 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:23.559 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:23.618 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:23.618 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Selecting Reagent HIM (1)===================
17-02-28 20:05:23.618 -08 000000018 INF: Valve A1: Go to position 1
17-02-28 20:05:23.618 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:05:23.663 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:05:23.663 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:05:23.663 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:05:23.663 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:05:23.663 -08 000000085 INF: ===================Camera #0 Frame #1===================
17-02-28 20:05:23.663 -08 000000073 INF: ===================Camera #2 Frame #1===================
17-02-28 20:05:23.669 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:23.682 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 8\r
17-02-28 20:05:23.682 -08 000000018 INF: Valve A1: 18.362 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:05:23.682 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 8 to 1
17-02-28 20:05:23.682 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW1\r
17-02-28 20:05:23.682 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:05:23.682 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:05:23.808 -08 000000062 INF: Y Motor: Unshifted Position: 5888329
17-02-28 20:05:23.816 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:05:23.816 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:05:23.816 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:05:23.816 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:05:23.816 -08 000000085 INF: ===================Camera #0 Frame #3===================
17-02-28 20:05:23.816 -08 000000073 INF: ===================Camera #2 Frame #3===================
17-02-28 20:05:23.858 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:23.972 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:05:23.972 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:05:23.972 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:05:23.972 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:05:23.972 -08 000000085 INF: ===================Camera #0 Frame #4===================
17-02-28 20:05:23.972 -08 000000073 INF: ===================Camera #2 Frame #4===================
17-02-28 20:05:23.982 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:24.117 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 1\r
17-02-28 20:05:24.117 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:24.117 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:05:24.118 -08 000000062 INF: Y Motor: Unshifted Position: 5841869
17-02-28 20:05:24.125 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:24.125 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:24.125 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:24.125 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:24.125 -08 000000073 INF: ===================Camera #2 Frame #5===================
17-02-28 20:05:24.125 -08 000000085 INF: ===================Camera #0 Frame #5===================
17-02-28 20:05:24.168 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:24.178 -08 000000100 INF: FPGA: Recv ZWAIT 
17-02-28 20:05:24.178 -08 000000064 INF: ===================Serial===================
17-02-28 20:05:24.180 -08 000000064 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:05:24.180 -08 000000064 INF: ===================Serial===================
17-02-28 20:05:24.181 -08 000000064 INF: ======================================
17-02-28 20:05:24.243 -08 000000039 INF: FPGA: Recv TDIYWAIT
17-02-28 20:05:24.243 -08 000000063 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:24.245 -08 000000063 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:05:24.246 -08 000000095 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:05:24.246 -08 000000058 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:05:24.246 -08 000000095 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:05:24.246 -08 000000095 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:05:24.246 -08 000000095 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:05:24.246 -08 000000095 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:05:24.246 -08 000000058 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:05:24.246 -08 000000058 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:05:24.246 -08 000000058 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:05:24.247 -08 000000058 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:05:24.278 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:05:24.278 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:05:24.278 -08 000000073 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:05:24.278 -08 000000073 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:05:24.278 -08 000000085 INF: ===================Camera #0 Frame #6===================
17-02-28 20:05:24.278 -08 000000073 INF: ===================Camera #2 Frame #6===================
17-02-28 20:05:24.281 -08 000000085 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:05:24.281 -08 000000073 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:05:24.282 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:24.282 -08 000000073 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:24.295 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:24.307 -08 000000073 INF: Camera #2 ReleaseBuffer
17-02-28 20:05:24.307 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:05:24.308 -08 000000073 INF: ======================================
17-02-28 20:05:24.331 -08 000000085 INF: Camera #0 ReleaseBuffer
17-02-28 20:05:24.331 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:05:24.332 -08 000000085 INF: ======================================
17-02-28 20:05:24.333 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:05:24.335 -08 000000069 INF: ======================================
17-02-28 20:05:24.433 -08 000000062 INF: Y Motor: Unshifted Position: 5797059
17-02-28 20:05:24.483 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:24.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:24.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:24.553 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:24.615 -08 000000064 INF: FPGA: Recv EX1MV
17-02-28 20:05:24.615 -08 000000064 INF: FPGA: Recv EX2MV
17-02-28 20:05:24.615 -08 000000095 INF: Excitation Filter 1: Moved 107 steps in 368.8786 ms
17-02-28 20:05:24.615 -08 000000095 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.1516 ms
17-02-28 20:05:24.615 -08 000000095 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.2302 ms
17-02-28 20:05:24.615 -08 000000058 INF: Excitation Filter 2: Moved 107 steps in 368.5969 ms
17-02-28 20:05:24.615 -08 000000058 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.0398 ms
17-02-28 20:05:24.615 -08 000000058 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.4181 ms
17-02-28 20:05:24.615 -08 000000095 INF: ======================================
17-02-28 20:05:24.616 -08 000000058 INF: ======================================
17-02-28 20:05:24.616 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:24.617 -08 000000062 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:05:24.617 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:24.617 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:24.617 -08 000000063 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:24.618 -08 000000063 INF: ======================================
17-02-28 20:05:24.624 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 1, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 50, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:05:24.682 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:05:24.682 -08 000000062 INF: Y Motor: Moved to 62.9704 after 1311 ms
17-02-28 20:05:24.682 -08 000000062 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:24.716 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:24.743 -08 000000062 INF: Y Motor: Recv v 4097\r
17-02-28 20:05:24.743 -08 000000062 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:24.743 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:24.804 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:05:24.804 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:05:24.805 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:05:24.805 -08 000000062 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:24.805 -08 000000062 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:24.867 -08 000000062 INF: Y Motor: Recv v 134217728\r
17-02-28 20:05:24.867 -08 000000062 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:05:24.867 -08 000000062 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:24.867 -08 000000062 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:24.904 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:05:24.929 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:05:24.929 -08 000000062 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:24.929 -08 000000062 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:24.929 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:24.993 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:24.994 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:05:24.994 -08 000000062 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:24.994 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:25.056 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:05:25.056 -08 000000062 INF: ======================================
17-02-28 20:05:25.057 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:25.058 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:25.059 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.059 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:05:25.093 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:25.116 -08 000000044 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:05:25.116 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:25.178 -08 000000068 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:05:25.178 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:05:25.179 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:25.240 -08 000000038 INF: FPGA: Recv ZADCR 2427
17-02-28 20:05:25.240 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:05:25.240 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:05:25.304 -08 000000099 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:05:25.305 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:05:25.305 -08 000000042 INF: TDIScan finished after 7103.8926 ms
17-02-28 20:05:25.305 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:05:25.305 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:05:25.305 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:05:25.364 -08 000000063 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:05:25.365 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.365 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.366 -08 000000033 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:05:25.366 -08 000000069 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:05:25.366 -08 000000094 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:05:25.366 -08 000000033 INF: ======================================
17-02-28 20:05:25.366 -08 000000069 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:25.366 -08 000000069 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:25.366 -08 000000094 INF: ======================================
17-02-28 20:05:25.429 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:05:25.429 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:25.429 -08 000000069 INF: ======================================
17-02-28 20:05:25.430 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.431 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.432 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:05:25.469 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.469 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:05:25.492 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:25.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:05:25.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.535 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:05:25.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:25.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:25.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:25.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:05:25.572 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:25.572 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:05:25.572 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:05:25.592 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:05:26.101 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:26.103 -08 000000095 INF: RunCopyService queue size at 2/28/2017 8:05:26 PM is 2
17-02-28 20:05:26.202 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:26.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:05:26.288 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:26.288 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-02-28 20:05:26.310 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.088618215924358Best Z position at top surface = -0.160030672513879Best Z position at top surface + compensator offset = -0.137330672513879 C:2,L:5,T
17-02-28 20:05:26.312 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.160030672513879
17-02-28 20:05:26.312 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97693
17-02-28 20:05:26.312 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.088618215924358
17-02-28 20:05:26.312 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.63332
17-02-28 20:05:26.312 -08 000000042 INF: Z-height at LaneTopSurface is -0.160030672513879.
17-02-28 20:05:26.312 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:26.388 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP9600R\r
17-02-28 20:05:26.448 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:05:26.448 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:05:26.473 -08 000000033 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:26.473 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:05:26.474 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:26.475 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.475 -08 000000042 INF: Lane 5, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:05:26.475 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.476 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.477 -08 000000083 INF: ===================Move Tilt Motor 1===================
17-02-28 20:05:26.477 -08 000000036 INF: ===================Move Tilt Motor 2===================
17-02-28 20:05:26.477 -08 000000078 INF: ===================Move Tilt Motor 3===================
17-02-28 20:05:26.477 -08 000000078 INF: ======================================
17-02-28 20:05:26.477 -08 000000036 INF: ======================================
17-02-28 20:05:26.478 -08 000000083 INF: ======================================
17-02-28 20:05:26.479 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.480 -08 000000042 INF: ETF Best Z: -0.1373307 mm (36000 DAC)
17-02-28 20:05:26.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.481 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:05:26.482 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:05:26.886 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:26.887 -08 000000068 INF: FPGA: Recv MIOCOMPF
17-02-28 20:05:26.888 -08 000000042 INF: Compensator: Moved IntoPath in 406 ms
17-02-28 20:05:26.888 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.889 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:26.895 -08 000000042 INF: Swath 1 position calculated to be: {X=79.69164, Y=39.76308} from estimated center X= 80.20699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:05:26.895 -08 000000042 INF: Swath 2 position calculated to be: {X=80.79964, Y=39.76308} from estimated center X= 80.20699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:05:26.901 -08 000000042 INF: Swath 0: Converted transform from (-38.53743, 1.692614) pixels to (-0.013455, 0.00069) mm.
17-02-28 20:05:26.907 -08 000000042 INF: Swath 1: Converted transform from (-59.89513, 0.3256253) pixels to (-0.0207, 0) mm.
17-02-28 20:05:26.907 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:05:26.907 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:05:26.908 -08 000000042 INF: Transformed XStagePosition from 79.69164 mm to 79.6781801320612 mm.
17-02-28 20:05:26.919 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5537793554841 mm.
17-02-28 20:05:26.919 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3537793554841 mm.
17-02-28 20:05:26.919 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4445293554841 mm.
17-02-28 20:05:26.921 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:26.922 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:05:26.922 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:26.922 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = E_1
17-02-28 20:05:26.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:26.931 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:26.931 -08 000000065 INF: ===================MoveEmissionFilters===================
17-02-28 20:05:26.931 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:05:26.931 -08 000000093 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:26.932 -08 000000029 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:26.932 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:26.932 -08 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:26.932 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:26.932 -08 000000044 INF: ===================Move X,Y, Parallel===================
17-02-28 20:05:26.933 -08 000000029 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:26.933 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:26.933 -08 000000093 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:05:26.933 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:26.933 -08 000000093 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:05:26.933 -08 000000036 INF: ===================Move X Motor without settling===================
17-02-28 20:05:26.933 -08 000000083 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:26.933 -08 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:26.933 -08 000000036 INF: X Motor: Xmit PR VM\n
17-02-28 20:05:26.934 -08 000000093 INF: Z Motor: Moving to -0.1573 mm, started at -0.0100 mm
17-02-28 20:05:26.934 -08 000000051 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:05:26.934 -08 000000083 INF: Y Motor: Moving to 64.5538 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:05:26.934 -08 000000090 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:05:26.934 -08 000000101 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:05:26.934 -08 000000004 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:05:26.934 -08 000000083 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:26.934 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:26.934 -08 000000059 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:05:26.934 -08 000000069 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:05:26.934 -08 000000095 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:05:26.934 -08 000000092 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:05:26.934 -08 000000101 INF: ======================================
17-02-28 20:05:26.934 -08 000000059 INF: ======================================
17-02-28 20:05:26.935 -08 000000093 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:05:26.935 -08 000000069 INF: ======================================
17-02-28 20:05:26.935 -08 000000095 INF: ======================================
17-02-28 20:05:26.935 -08 000000004 INF: ======================================
17-02-28 20:05:26.936 -08 000000092 INF: ======================================
17-02-28 20:05:26.936 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:26.936 -08 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:26.936 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:26.937 -08 000000090 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:05:26.937 -08 000000051 INF: ======================================
17-02-28 20:05:26.937 -08 000000100 INF: ======================================
17-02-28 20:05:26.937 -08 000000090 INF: ======================================
17-02-28 20:05:26.937 -08 000000037 INF: ======================================
17-02-28 20:05:26.938 -08 000000033 INF: ======================================
17-02-28 20:05:26.938 -08 000000029 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:26.939 -08 000000029 INF: ======================================
17-02-28 20:05:26.940 -08 000000065 INF: ======================================
17-02-28 20:05:26.943 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:27.005 -08 000000078 INF: FPGA: Recv ZTRG 
17-02-28 20:05:27.005 -08 000000093 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:05:27.007 -08 000000036 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:05:27.007 -08 000000036 INF: X Motor: Xmit PR VI\n
17-02-28 20:05:27.009 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:27.009 -08 000000083 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:27.009 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:27.067 -08 000000054 INF: FPGA: Recv ZYT 
17-02-28 20:05:27.067 -08 000000093 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:05:27.067 -08 000000093 INF: FPGA: Xmit ZMV 41243\n
17-02-28 20:05:27.069 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:27.069 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:27.069 -08 000000036 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:05:27.069 -08 000000036 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:05:27.069 -08 000000036 INF: X Motor: Moving to 79.6782 mm @15.000 mm/sec, started at 80.2451 mm
17-02-28 20:05:27.069 -08 000000036 INF: X Motor: Xmit MA 8470\n
17-02-28 20:05:27.128 -08 000000033 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:05:27.128 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:05:27.130 -08 000000036 INF: X Motor: Recv MA 8470\r\n>
17-02-28 20:05:27.130 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:27.130 -08 000000083 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:27.130 -08 000000036 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:05:27.130 -08 000000083 INF: Y Motor: Set target position to 5955378 encoder counts
17-02-28 20:05:27.130 -08 000000083 INF: Y Motor: Xmit s r0xca 5955378\r
17-02-28 20:05:27.192 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:27.192 -08 000000083 INF: Y Motor: Start the move command
17-02-28 20:05:27.192 -08 000000083 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:27.193 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:27.252 -08 000000070 INF: FPGA: Recv ZMV 
17-02-28 20:05:27.252 -08 000000093 INF: Z Motor: MoveAndTrigger 'ZMV' command took 184.7193 ms
17-02-28 20:05:27.252 -08 000000093 INF: FPGA: Xmit ZDACR\n
17-02-28 20:05:27.253 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:27.254 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:27.254 -08 000000083 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:05:27.254 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:27.317 -08 000000099 INF: FPGA: Recv ZDACR 41243
17-02-28 20:05:27.317 -08 000000093 INF: Z Motor: MoveAndTrigger took 383.9321 ms w/comms
17-02-28 20:05:27.317 -08 000000093 INF: Z Motor: After move to -0.1573, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:05:27.317 -08 000000093 INF: Z Motor: MoveAbsStepped took 384.1229 ms
17-02-28 20:05:27.318 -08 000000093 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:27.319 -08 000000093 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:05:27.320 -08 000000092 INF: ===================TDI Scan Setup===================
17-02-28 20:05:27.320 -08 000000077 INF: ===================Camera Arm TDI===================
17-02-28 20:05:27.320 -08 000000092 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:27.321 -08 000000077 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:27.321 -08 000000092 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:05:27.322 -08 000000077 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:27.322 -08 000000092 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:27.322 -08 000000092 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:05:27.379 -08 000000004 INF: FPGA: Recv ZSEL 
17-02-28 20:05:27.379 -08 000000092 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:27.380 -08 000000092 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:05:27.381 -08 000000083 INF: Y Motor: Unshifted Position: 5882247
17-02-28 20:05:27.431 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:27.442 -08 000000058 INF: FPGA: Recv TDIBB
17-02-28 20:05:27.442 -08 000000092 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:27.443 -08 000000092 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:05:27.444 -08 000000092 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:27.445 -08 000000092 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:05:27.445 -08 000000092 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:05:27.445 -08 000000092 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:05:27.503 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:27.504 -08 000000004 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:27.504 -08 000000092 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:27.506 -08 000000092 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:05:27.506 -08 000000092 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:27.508 -08 000000092 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:05:27.508 -08 000000092 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:05:27.508 -08 000000092 INF: Z Motor: Arming to move to -0.1173 mm
17-02-28 20:05:27.508 -08 000000092 INF: FPGA: Xmit ZYT 6435378 4\n
17-02-28 20:05:27.557 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:27.566 -08 000000064 INF: FPGA: Recv ZYT 
17-02-28 20:05:27.567 -08 000000092 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6382247 enc / 63.822 mm / ) = 6435378 enc / 64.354 mm
17-02-28 20:05:27.567 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:27.567 -08 000000092 INF: FPGA: Xmit ZARM 30757\n
17-02-28 20:05:27.568 -08 000000036 INF: X Motor: Xmit PR ER\n
17-02-28 20:05:27.629 -08 000000099 INF: FPGA: Recv ZARM
17-02-28 20:05:27.629 -08 000000092 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.2176 ms
17-02-28 20:05:27.629 -08 000000092 INF: Z Motor: ArmAbsStepped took 120.8806 ms
17-02-28 20:05:27.629 -08 000000092 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:27.630 -08 000000092 INF: ===================TDI Scan Setup===================
17-02-28 20:05:27.631 -08 000000036 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:05:27.631 -08 000000036 INF: X Motor: Moved to 79.6787 after 501 ms
17-02-28 20:05:27.631 -08 000000036 INF: ======================================
17-02-28 20:05:27.632 -08 000000092 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:05:27.632 -08 000000092 INF: ===================TDI Scan Setup===================
17-02-28 20:05:27.634 -08 000000092 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:05:27.634 -08 000000092 INF: ===================TDI Scan Setup===================
17-02-28 20:05:27.635 -08 000000092 INF: ======================================
17-02-28 20:05:27.694 -08 000000083 INF: Y Motor: Unshifted Position: 5955380
17-02-28 20:05:27.694 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:27.694 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:27.754 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:27.754 -08 000000083 INF: Y Motor: Moved to 64.5538 after 500 ms
17-02-28 20:05:27.754 -08 000000083 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:27.816 -08 000000083 INF: Y Motor: Recv v 4096\r
17-02-28 20:05:27.816 -08 000000083 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:27.816 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:27.817 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:27.879 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:27.880 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:27.880 -08 000000083 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:27.880 -08 000000083 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:27.942 -08 000000083 INF: Y Motor: Recv v 402653184\r
17-02-28 20:05:27.942 -08 000000083 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:05:27.942 -08 000000083 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:27.942 -08 000000083 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:28.005 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:28.005 -08 000000083 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:28.005 -08 000000083 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:28.005 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:28.067 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:28.067 -08 000000083 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:28.067 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:28.128 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:28.128 -08 000000083 INF: ======================================
17-02-28 20:05:28.129 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:28.129 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:05:28.130 -08 000000044 INF: ======================================
17-02-28 20:05:28.189 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:28.263 -08 000000077 INF: Camera #0 AttachBuffer (imageDataPtr = 56909434928 imgPtr = 56909434928 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:05:28.264 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:05:28.264 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:28.279 -08 000000077 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:28.281 -08 000000077 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:28.439 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:28.503 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:28.753 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:28.814 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:29.064 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:29.126 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:29.290 -08 000000077 INF: Camera #2 AttachBuffer (imageDataPtr = 58721374256 imgPtr = 59627343920 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:05:29.290 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:05:29.290 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:29.305 -08 000000077 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:29.307 -08 000000077 INF: ===================Camera Arm TDI===================
17-02-28 20:05:29.308 -08 000000077 INF: ======================================
17-02-28 20:05:29.309 -08 000000093 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:29.310 -08 000000093 INF: ======================================
17-02-28 20:05:29.311 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:29.312 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:29.312 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:05:29.312 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:05:29.376 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:29.377 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:29.377 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:05:29.440 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:29.440 -08 000000090 INF: FPGA: Recv ZFREQCL
17-02-28 20:05:29.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:05:29.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:29.440 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:29.499 -08 000000084 INF: FPGA: Recv TDIYERD 6455379
17-02-28 20:05:29.499 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455379 counts (64.554 mm)
17-02-28 20:05:29.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:29.500 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:29.500 -08 000000085 INF: ===================TDI FPGA Arm===================
17-02-28 20:05:29.500 -08 000000064 INF: ===================Set YMotor gains for scans===================
17-02-28 20:05:29.501 -08 000000064 INF: ======================================
17-02-28 20:05:29.501 -08 000000085 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:29.502 -08 000000085 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:05:29.502 -08 000000085 INF: FPGA: Xmit TDIYPOS 6344453\n
17-02-28 20:05:29.561 -08 000000080 INF: FPGA: Recv TDIYPOS
17-02-28 20:05:29.561 -08 000000085 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:29.562 -08 000000085 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:05:29.563 -08 000000085 INF: FPGA: Xmit TDIYARM3 139264 6435378 1 1\n
17-02-28 20:05:29.625 -08 000000038 INF: FPGA: Recv TDIYARM3
17-02-28 20:05:29.625 -08 000000085 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:29.626 -08 000000085 INF: ===================TDI FPGA Arm===================
17-02-28 20:05:29.627 -08 000000085 INF: ======================================
17-02-28 20:05:29.628 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:29.629 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:29.629 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:29.629 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:29.630 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:29.633 -08 000000033 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:05:29.633 -08 000000073 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:05:29.633 -08 000000033 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:05:29.633 -08 000000033 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:05:29.633 -08 000000033 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:05:29.633 -08 000000073 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:05:29.633 -08 000000073 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:05:29.633 -08 000000073 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:05:29.633 -08 000000033 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:05:29.634 -08 000000073 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:05:29.690 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:29.749 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:29.998 -08 000000070 INF: FPGA: Recv EX2MV
17-02-28 20:05:29.998 -08 000000070 INF: FPGA: Recv EX1MV
17-02-28 20:05:29.998 -08 000000073 INF: Excitation Filter 1: Moved -107 steps in 364.6774 ms
17-02-28 20:05:29.998 -08 000000073 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 364.7716 ms
17-02-28 20:05:29.998 -08 000000073 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 364.8428 ms
17-02-28 20:05:29.998 -08 000000033 INF: Excitation Filter 2: Moved -107 steps in 364.8424 ms
17-02-28 20:05:29.998 -08 000000033 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.0324 ms
17-02-28 20:05:29.998 -08 000000033 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.0994 ms
17-02-28 20:05:29.998 -08 000000073 INF: ======================================
17-02-28 20:05:29.998 -08 000000033 INF: ======================================
17-02-28 20:05:29.999 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:29.999 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:30.000 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:30.001 -08 000000065 INF: ===================Camera TDI===================
17-02-28 20:05:30.001 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:30.001 -08 000000100 INF: ===================FPGA Z Wait===================
17-02-28 20:05:30.001 -08 000000025 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:30.001 -08 000000100 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:05:30.002 -08 000000025 INF: Y Motor: Moving to 14.9054 mm @6.500 mm/sec, started at 64.5538 mm
17-02-28 20:05:30.002 -08 000000025 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:30.002 -08 000000025 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:30.002 -08 000000065 INF: ===================Camera TDI, Parallel===================
17-02-28 20:05:30.002 -08 000000047 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:05:30.003 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:05:30.003 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:05:30.003 -08 000000047 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:05:30.004 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:30.004 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:30.005 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:30.005 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:30.063 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:30.064 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:05:30.064 -08 000000025 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:30.064 -08 000000025 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:30.126 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:05:30.126 -08 000000025 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:30.155 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:30.155 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:30.155 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:30.155 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:30.188 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:05:30.188 -08 000000025 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:30.188 -08 000000025 INF: Y Motor: Set target position to 990544 encoder counts
17-02-28 20:05:30.188 -08 000000025 INF: Y Motor: Xmit s r0xca 990544\r
17-02-28 20:05:30.250 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:05:30.250 -08 000000025 INF: Y Motor: Start the move command
17-02-28 20:05:30.250 -08 000000025 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:30.305 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:30.305 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:30.305 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:30.305 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:30.313 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:30.314 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:05:30.314 -08 000000025 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:05:30.314 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:30.374 -08 000000031 INF: FPGA: Recv ZWAIT 
17-02-28 20:05:30.374 -08 000000100 INF: ======================================
17-02-28 20:05:30.375 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:30.438 -08 000000025 INF: Y Motor: Unshifted Position: 5892222
17-02-28 20:05:30.455 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:30.455 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:30.455 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:30.455 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:30.455 -08 000000058 INF: ===================Camera #2 Frame #5===================
17-02-28 20:05:30.455 -08 000000064 INF: ===================Camera #0 Frame #5===================
17-02-28 20:05:30.488 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:30.611 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:30.620 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:05:30.620 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:05:30.620 -08 000000064 INF: ===================Camera #0 Frame #11===================
17-02-28 20:05:30.621 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:05:30.621 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:05:30.621 -08 000000058 INF: ===================Camera #2 Frame #11===================
17-02-28 20:05:30.625 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:30.687 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:30.751 -08 000000025 INF: Y Motor: Unshifted Position: 5689424
17-02-28 20:05:30.790 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:05:30.790 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:05:30.790 -08 000000064 INF: ===================Camera #0 Frame #17===================
17-02-28 20:05:30.792 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:05:30.792 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:05:30.792 -08 000000058 INF: ===================Camera #2 Frame #17===================
17-02-28 20:05:30.801 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:30.925 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:30.937 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:30.960 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:05:30.960 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:05:30.960 -08 000000064 INF: ===================Camera #0 Frame #23===================
17-02-28 20:05:30.963 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:05:30.963 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:05:30.963 -08 000000058 INF: ===================Camera #2 Frame #23===================
17-02-28 20:05:30.998 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:31.063 -08 000000025 INF: Y Motor: Unshifted Position: 5487068
17-02-28 20:05:31.113 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:31.130 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:05:31.130 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:05:31.130 -08 000000064 INF: ===================Camera #0 Frame #29===================
17-02-28 20:05:31.134 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:05:31.134 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:05:31.134 -08 000000058 INF: ===================Camera #2 Frame #30===================
17-02-28 20:05:31.237 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:31.248 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:31.300 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:05:31.300 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:05:31.300 -08 000000064 INF: ===================Camera #0 Frame #36===================
17-02-28 20:05:31.308 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:05:31.308 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:05:31.308 -08 000000058 INF: ===================Camera #2 Frame #36===================
17-02-28 20:05:31.311 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:31.375 -08 000000025 INF: Y Motor: Unshifted Position: 5283611
17-02-28 20:05:31.425 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:31.473 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:05:31.473 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:05:31.473 -08 000000064 INF: ===================Camera #0 Frame #42===================
17-02-28 20:05:31.479 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:05:31.479 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:05:31.479 -08 000000058 INF: ===================Camera #2 Frame #42===================
17-02-28 20:05:31.549 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:31.561 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:31.622 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:31.643 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:05:31.643 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:05:31.643 -08 000000064 INF: ===================Camera #0 Frame #48===================
17-02-28 20:05:31.650 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:05:31.650 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:05:31.650 -08 000000058 INF: ===================Camera #2 Frame #49===================
17-02-28 20:05:31.685 -08 000000025 INF: Y Motor: Unshifted Position: 5081242
17-02-28 20:05:31.735 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:31.813 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:05:31.813 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:05:31.813 -08 000000064 INF: ===================Camera #0 Frame #55===================
17-02-28 20:05:31.824 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:05:31.824 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:05:31.824 -08 000000058 INF: ===================Camera #2 Frame #55===================
17-02-28 20:05:31.861 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:31.872 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:31.933 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:31.986 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:05:31.986 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:05:31.986 -08 000000064 INF: ===================Camera #0 Frame #61===================
17-02-28 20:05:31.995 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:05:31.995 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:05:31.995 -08 000000058 INF: ===================Camera #2 Frame #61===================
17-02-28 20:05:31.999 -08 000000025 INF: Y Motor: Unshifted Position: 4878875
17-02-28 20:05:32.049 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:32.156 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:05:32.156 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:05:32.156 -08 000000064 INF: ===================Camera #0 Frame #67===================
17-02-28 20:05:32.166 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:05:32.166 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:05:32.166 -08 000000058 INF: ===================Camera #2 Frame #68===================
17-02-28 20:05:32.172 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:32.183 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:32.245 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:32.311 -08 000000025 INF: Y Motor: Unshifted Position: 4676078
17-02-28 20:05:32.326 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:05:32.326 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:05:32.326 -08 000000064 INF: ===================Camera #0 Frame #73===================
17-02-28 20:05:32.340 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:05:32.340 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:05:32.340 -08 000000058 INF: ===================Camera #2 Frame #74===================
17-02-28 20:05:32.361 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:32.483 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:32.495 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:32.496 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:05:32.496 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:05:32.496 -08 000000064 INF: ===================Camera #0 Frame #80===================
17-02-28 20:05:32.511 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:05:32.511 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:05:32.511 -08 000000058 INF: ===================Camera #2 Frame #80===================
17-02-28 20:05:32.558 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:32.624 -08 000000025 INF: Y Motor: Unshifted Position: 4472399
17-02-28 20:05:32.669 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:05:32.669 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:05:32.669 -08 000000064 INF: ===================Camera #0 Frame #86===================
17-02-28 20:05:32.674 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:32.682 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:05:32.682 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:05:32.682 -08 000000058 INF: ===================Camera #2 Frame #87===================
17-02-28 20:05:32.797 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:32.808 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:32.839 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:05:32.839 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:05:32.839 -08 000000064 INF: ===================Camera #0 Frame #92===================
17-02-28 20:05:32.856 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:05:32.856 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:05:32.856 -08 000000058 INF: ===================Camera #2 Frame #93===================
17-02-28 20:05:32.870 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:32.935 -08 000000025 INF: Y Motor: Unshifted Position: 4269599
17-02-28 20:05:32.985 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:33.009 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:05:33.009 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:05:33.009 -08 000000064 INF: ===================Camera #0 Frame #99===================
17-02-28 20:05:33.027 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:05:33.027 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:05:33.027 -08 000000058 INF: ===================Camera #2 Frame #99===================
17-02-28 20:05:33.109 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:33.120 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:33.180 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:05:33.180 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:05:33.180 -08 000000064 INF: ===================Camera #0 Frame #105===================
17-02-28 20:05:33.182 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:33.196 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:05:33.196 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:05:33.196 -08 000000058 INF: ===================Camera #2 Frame #105===================
17-02-28 20:05:33.245 -08 000000025 INF: Y Motor: Unshifted Position: 4066575
17-02-28 20:05:33.295 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:33.348 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:05:33.348 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:05:33.348 -08 000000064 INF: ===================Camera #0 Frame #111===================
17-02-28 20:05:33.365 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:05:33.365 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:05:33.365 -08 000000058 INF: ===================Camera #2 Frame #112===================
17-02-28 20:05:33.421 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:33.432 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:33.494 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:33.518 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:05:33.518 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:05:33.518 -08 000000064 INF: ===================Camera #0 Frame #117===================
17-02-28 20:05:33.539 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:05:33.539 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:05:33.539 -08 000000058 INF: ===================Camera #2 Frame #118===================
17-02-28 20:05:33.559 -08 000000025 INF: Y Motor: Unshifted Position: 3863561
17-02-28 20:05:33.609 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:33.688 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:05:33.688 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:05:33.688 -08 000000064 INF: ===================Camera #0 Frame #124===================
17-02-28 20:05:33.710 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:05:33.710 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:05:33.710 -08 000000058 INF: ===================Camera #2 Frame #124===================
17-02-28 20:05:33.733 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:33.744 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:33.806 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:33.861 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:05:33.861 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:05:33.861 -08 000000064 INF: ===================Camera #0 Frame #130===================
17-02-28 20:05:33.871 -08 000000025 INF: Y Motor: Unshifted Position: 3660757
17-02-28 20:05:33.881 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:05:33.881 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:05:33.881 -08 000000058 INF: ===================Camera #2 Frame #131===================
17-02-28 20:05:33.921 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.031 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:05:34.031 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:05:34.031 -08 000000064 INF: ===================Camera #0 Frame #136===================
17-02-28 20:05:34.045 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.055 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:05:34.055 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:05:34.055 -08 000000058 INF: ===================Camera #2 Frame #137===================
17-02-28 20:05:34.056 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:34.119 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:34.180 -08 000000025 INF: Y Motor: Unshifted Position: 3457963
17-02-28 20:05:34.201 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:05:34.201 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:05:34.201 -08 000000064 INF: ===================Camera #0 Frame #142===================
17-02-28 20:05:34.226 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:05:34.226 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:05:34.226 -08 000000058 INF: ===================Camera #2 Frame #143===================
17-02-28 20:05:34.230 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.355 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.369 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:34.369 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:05:34.369 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:05:34.369 -08 000000064 INF: ===================Camera #0 Frame #149===================
17-02-28 20:05:34.397 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:05:34.397 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:05:34.397 -08 000000058 INF: ===================Camera #2 Frame #150===================
17-02-28 20:05:34.430 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:34.493 -08 000000025 INF: Y Motor: Unshifted Position: 3254947
17-02-28 20:05:34.542 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:05:34.542 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:05:34.542 -08 000000064 INF: ===================Camera #0 Frame #155===================
17-02-28 20:05:34.543 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.571 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:05:34.571 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:05:34.571 -08 000000058 INF: ===================Camera #2 Frame #156===================
17-02-28 20:05:34.668 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.680 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:34.712 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:05:34.712 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:05:34.712 -08 000000064 INF: ===================Camera #0 Frame #161===================
17-02-28 20:05:34.742 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:05:34.742 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:05:34.742 -08 000000058 INF: ===================Camera #2 Frame #162===================
17-02-28 20:05:34.745 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:34.806 -08 000000025 INF: Y Motor: Unshifted Position: 3050200
17-02-28 20:05:34.856 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.882 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:05:34.882 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:05:34.882 -08 000000064 INF: ===================Camera #0 Frame #168===================
17-02-28 20:05:34.912 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:05:34.912 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:05:34.912 -08 000000058 INF: ===================Camera #2 Frame #169===================
17-02-28 20:05:34.979 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:34.995 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:35.054 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:35.055 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:05:35.055 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:05:35.055 -08 000000064 INF: ===================Camera #0 Frame #174===================
17-02-28 20:05:35.086 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:05:35.086 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:05:35.086 -08 000000058 INF: ===================Camera #2 Frame #175===================
17-02-28 20:05:35.116 -08 000000025 INF: Y Motor: Unshifted Position: 2849138
17-02-28 20:05:35.166 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:35.225 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:05:35.225 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:05:35.225 -08 000000064 INF: ===================Camera #0 Frame #180===================
17-02-28 20:05:35.257 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:05:35.257 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:05:35.257 -08 000000058 INF: ===================Camera #2 Frame #181===================
17-02-28 20:05:35.292 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:35.304 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:35.365 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:35.395 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:05:35.395 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:05:35.395 -08 000000064 INF: ===================Camera #0 Frame #186===================
17-02-28 20:05:35.428 -08 000000025 INF: Y Motor: Unshifted Position: 2646992
17-02-28 20:05:35.429 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:05:35.429 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:05:35.429 -08 000000058 INF: ===================Camera #2 Frame #188===================
17-02-28 20:05:35.478 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:35.565 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:05:35.565 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:05:35.565 -08 000000064 INF: ===================Camera #0 Frame #193===================
17-02-28 20:05:35.603 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:05:35.603 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:05:35.603 -08 000000058 INF: ===================Camera #2 Frame #194===================
17-02-28 20:05:35.605 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:35.615 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:35.678 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:35.738 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:05:35.738 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:05:35.738 -08 000000064 INF: ===================Camera #0 Frame #199===================
17-02-28 20:05:35.741 -08 000000025 INF: Y Motor: Unshifted Position: 2443329
17-02-28 20:05:35.773 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:05:35.773 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:05:35.773 -08 000000058 INF: ===================Camera #2 Frame #200===================
17-02-28 20:05:35.791 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:35.908 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:05:35.908 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:05:35.908 -08 000000064 INF: ===================Camera #0 Frame #205===================
17-02-28 20:05:35.915 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:35.928 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:35.944 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:05:35.944 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:05:35.944 -08 000000058 INF: ===================Camera #2 Frame #207===================
17-02-28 20:05:35.992 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:36.054 -08 000000025 INF: Y Motor: Unshifted Position: 2238577
17-02-28 20:05:36.078 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:05:36.078 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:05:36.078 -08 000000064 INF: ===================Camera #0 Frame #212===================
17-02-28 20:05:36.104 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:36.118 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:05:36.118 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:05:36.118 -08 000000058 INF: ===================Camera #2 Frame #213===================
17-02-28 20:05:36.228 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:36.243 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:36.252 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:05:36.252 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:05:36.252 -08 000000064 INF: ===================Camera #0 Frame #218===================
17-02-28 20:05:36.290 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:05:36.290 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:05:36.290 -08 000000058 INF: ===================Camera #2 Frame #219===================
17-02-28 20:05:36.304 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:36.367 -08 000000025 INF: Y Motor: Unshifted Position: 2036861
17-02-28 20:05:36.417 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:36.422 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:05:36.422 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:05:36.422 -08 000000064 INF: ===================Camera #0 Frame #224===================
17-02-28 20:05:36.461 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:05:36.461 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:05:36.461 -08 000000058 INF: ===================Camera #2 Frame #226===================
17-02-28 20:05:36.540 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:36.554 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:36.592 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:05:36.592 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:05:36.592 -08 000000064 INF: ===================Camera #0 Frame #230===================
17-02-28 20:05:36.615 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:36.635 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:05:36.635 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:05:36.635 -08 000000058 INF: ===================Camera #2 Frame #232===================
17-02-28 20:05:36.678 -08 000000025 INF: Y Motor: Unshifted Position: 1834493
17-02-28 20:05:36.728 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:36.762 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:05:36.762 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:05:36.762 -08 000000064 INF: ===================Camera #0 Frame #237===================
17-02-28 20:05:36.806 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:05:36.806 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:05:36.806 -08 000000058 INF: ===================Camera #2 Frame #238===================
17-02-28 20:05:36.853 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:36.865 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:36.928 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:36.935 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:05:36.935 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:05:36.935 -08 000000064 INF: ===================Camera #0 Frame #243===================
17-02-28 20:05:36.977 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:05:36.977 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:05:36.977 -08 000000058 INF: ===================Camera #2 Frame #245===================
17-02-28 20:05:36.991 -08 000000025 INF: Y Motor: Unshifted Position: 1631040
17-02-28 20:05:37.041 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.105 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:05:37.105 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:05:37.105 -08 000000064 INF: ===================Camera #0 Frame #249===================
17-02-28 20:05:37.151 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:05:37.151 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:05:37.151 -08 000000058 INF: ===================Camera #2 Frame #251===================
17-02-28 20:05:37.164 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.178 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:37.241 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:37.275 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:05:37.275 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:05:37.275 -08 000000064 INF: ===================Camera #0 Frame #256===================
17-02-28 20:05:37.302 -08 000000025 INF: Y Motor: Unshifted Position: 1427367
17-02-28 20:05:37.322 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:05:37.322 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:05:37.322 -08 000000058 INF: ===================Camera #2 Frame #257===================
17-02-28 20:05:37.352 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.448 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:05:37.448 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:05:37.448 -08 000000064 INF: ===================Camera #0 Frame #262===================
17-02-28 20:05:37.476 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.491 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:37.493 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:05:37.493 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:05:37.493 -08 000000058 INF: ===================Camera #2 Frame #264===================
17-02-28 20:05:37.552 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:37.615 -08 000000025 INF: Y Motor: Unshifted Position: 1225211
17-02-28 20:05:37.618 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:05:37.618 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:05:37.618 -08 000000064 INF: ===================Camera #0 Frame #268===================
17-02-28 20:05:37.665 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.667 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:05:37.667 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:05:37.667 -08 000000058 INF: ===================Camera #2 Frame #270===================
17-02-28 20:05:37.737 -08 000000029 INF: FPGA: Recv TDIYWAIT
17-02-28 20:05:37.737 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:37.738 -08 000000047 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:05:37.739 -08 000000037 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:05:37.740 -08 000000039 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:05:37.740 -08 000000037 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:05:37.740 -08 000000037 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:05:37.740 -08 000000037 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:05:37.740 -08 000000039 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:05:37.740 -08 000000037 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:05:37.740 -08 000000039 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:05:37.740 -08 000000039 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:05:37.741 -08 000000039 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:05:37.788 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.788 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:37.788 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:37.788 -08 000000064 INF: ===================Camera #0 Frame #272===================
17-02-28 20:05:37.801 -08 000000064 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:37.802 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:37.802 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:37.864 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:37.925 -08 000000025 INF: Y Motor: Unshifted Position: 1022415
17-02-28 20:05:37.968 -08 000000064 INF: Camera #0 ReleaseBuffer
17-02-28 20:05:37.968 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:37.968 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:37.968 -08 000000058 INF: ===================Camera #2 Frame #272===================
17-02-28 20:05:37.968 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:05:37.975 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:37.975 -08 000000058 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:37.976 -08 000000058 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:37.998 -08 000000064 INF: ======================================
17-02-28 20:05:38.110 -08 000000029 INF: FPGA: Recv EX2MV
17-02-28 20:05:38.110 -08 000000029 INF: FPGA: Recv EX1MV
17-02-28 20:05:38.110 -08 000000039 INF: Excitation Filter 1: Moved 107 steps in 370.2631 ms
17-02-28 20:05:38.110 -08 000000039 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.3905 ms
17-02-28 20:05:38.110 -08 000000039 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.4598 ms
17-02-28 20:05:38.110 -08 000000037 INF: Excitation Filter 2: Moved 107 steps in 370.4567 ms
17-02-28 20:05:38.110 -08 000000037 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.6475 ms
17-02-28 20:05:38.110 -08 000000037 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.7737 ms
17-02-28 20:05:38.110 -08 000000039 INF: ======================================
17-02-28 20:05:38.111 -08 000000037 INF: ======================================
17-02-28 20:05:38.112 -08 000000025 INF: Y Motor: Unshifted Position: 990543
17-02-28 20:05:38.112 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:38.112 -08 000000025 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:38.112 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:38.113 -08 000000047 INF: ======================================
17-02-28 20:05:38.114 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:38.228 -08 000000058 INF: Camera #2 ReleaseBuffer
17-02-28 20:05:38.229 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:38.229 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:05:38.230 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:05:38.230 -08 000000025 INF: Y Motor: Moved to 14.9054 after 7915 ms
17-02-28 20:05:38.230 -08 000000025 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:38.264 -08 000000058 INF: ======================================
17-02-28 20:05:38.265 -08 000000065 INF: ===================Camera TDI===================
17-02-28 20:05:38.266 -08 000000065 INF: ======================================
17-02-28 20:05:38.284 -08 000000025 INF: Y Motor: Recv v 4097\r
17-02-28 20:05:38.284 -08 000000025 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:38.284 -08 000000025 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:38.347 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:05:38.347 -08 000000025 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:38.347 -08 000000025 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:38.411 -08 000000025 INF: Y Motor: Recv v 134217728\r
17-02-28 20:05:38.411 -08 000000025 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:05:38.411 -08 000000025 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:38.411 -08 000000025 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:38.471 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:05:38.471 -08 000000025 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:38.471 -08 000000025 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:38.471 -08 000000025 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:38.479 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:38.536 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:38.537 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:05:38.537 -08 000000025 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:38.537 -08 000000025 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:38.596 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:05:38.596 -08 000000025 INF: ======================================
17-02-28 20:05:38.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:38.598 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:38.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:38.599 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:05:38.656 -08 000000033 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:05:38.656 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:38.721 -08 000000039 INF: FPGA: Recv TDIYERD 1490545
17-02-28 20:05:38.721 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:05:38.783 -08 000000093 INF: FPGA: Recv ZADCR 35840
17-02-28 20:05:38.783 -08 000000042 INF: At scan end Y pos = 14.905 and Z pos = -0.137. Y moved -48.539 mm
17-02-28 20:05:38.783 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:05:38.786 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:38.845 -08 000000025 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:05:38.845 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:05:38.845 -08 000000042 INF: TDIScan finished after 11936.7377 ms
17-02-28 20:05:38.845 -08 000000042 INF: Image[0]: Y should trigger at 63.445 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:05:38.845 -08 000000042 INF: Image[2]: Y should trigger at 63.445 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:05:38.846 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:38.847 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:38.879 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.491 um
17-02-28 20:05:38.879 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:38.880 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:05:38.908 -08 000000037 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:05:38.908 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:38.909 -08 000000068 INF: ===================Dither Clean Up Command===================
17-02-28 20:05:38.909 -08 000000047 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:05:38.909 -08 000000078 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:05:38.909 -08 000000100 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:05:38.910 -08 000000100 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:05:38.910 -08 000000047 INF: ======================================
17-02-28 20:05:38.910 -08 000000100 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:05:38.910 -08 000000078 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:38.910 -08 000000078 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:38.910 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:38.910 -08 000000063 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:05:38.910 -08 000000063 INF: ======================================
17-02-28 20:05:38.911 -08 000000073 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:05:38.970 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:38.970 -08 000000051 INF: FPGA: Recv ZSEL 
17-02-28 20:05:38.970 -08 000000073 INF: FPGA: Xmit ZDACW 41243\n
17-02-28 20:05:38.970 -08 000000100 INF: ======================================
17-02-28 20:05:38.972 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:05:38.972 -08 000000078 INF: ======================================
17-02-28 20:05:39.031 -08 000000037 INF: FPGA: Recv ZDACW 
17-02-28 20:05:39.031 -08 000000073 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:05:39.032 -08 000000073 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:05:39.093 -08 000000065 INF: FPGA: Recv TDIBB
17-02-28 20:05:39.093 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:39.094 -08 000000073 INF: ======================================
17-02-28 20:05:39.095 -08 000000068 INF: ======================================
17-02-28 20:05:39.096 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:39.096 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.097 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:05:39.097 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.097 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:05:39.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:05:39.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:05:39.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.098 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:05:39.099 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:05:39.099 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:05:39.099 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-02-28 20:05:39.100 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:05:39.100 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:05:39.122 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:05:39.122 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:39.122 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:05:39.122 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.123 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:05:39.123 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:05:39.123 -08 000000042 INF: Transformed XStagePosition from 80.79964 mm to 80.7789368405938 mm.
17-02-28 20:05:39.135 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5530893554688 mm.
17-02-28 20:05:39.135 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3530893554688 mm.
17-02-28 20:05:39.135 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4438393554687 mm.
17-02-28 20:05:39.138 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.138 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:05:39.138 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:39.138 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -157.3 um, section = E_1
17-02-28 20:05:39.140 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:39.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:39.145 -08 000000068 INF: ===================MoveEmissionFilters===================
17-02-28 20:05:39.147 -08 000000065 INF: ===================Move X,Y===================
17-02-28 20:05:39.148 -08 000000065 INF: ===================Move X,Y, Parallel===================
17-02-28 20:05:39.150 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:39.150 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:39.151 -08 000000092 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:39.152 -08 000000092 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:39.152 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:05:39.152 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:39.153 -08 000000084 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:05:39.153 -08 000000081 INF: ===================Move X Motor without settling===================
17-02-28 20:05:39.153 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:39.153 -08 000000081 INF: X Motor: Xmit PR VM\n
17-02-28 20:05:39.157 -08 000000078 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:05:39.157 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:05:39.157 -08 000000078 INF: ======================================
17-02-28 20:05:39.157 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:39.157 -08 000000027 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:05:39.158 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:39.158 -08 000000027 INF: ======================================
17-02-28 20:05:39.160 -08 000000078 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:05:39.160 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:05:39.160 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:39.160 -08 000000078 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:05:39.160 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:39.160 -08 000000078 INF: ======================================
17-02-28 20:05:39.161 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:39.161 -08 000000027 INF: ===================Camera Arm TDI===================
17-02-28 20:05:39.161 -08 000000031 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:05:39.161 -08 000000031 INF: ======================================
17-02-28 20:05:39.162 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:05:39.162 -08 000000083 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:39.162 -08 000000027 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:39.162 -08 000000083 INF: Y Motor: Moving to 64.5531 mm @25.000 mm/sec, started at 14.9054 mm
17-02-28 20:05:39.162 -08 000000036 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:05:39.162 -08 000000083 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:39.162 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:39.162 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:39.162 -08 000000078 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:05:39.163 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:39.163 -08 000000087 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:05:39.163 -08 000000078 INF: ======================================
17-02-28 20:05:39.163 -08 000000092 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:39.163 -08 000000027 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:39.163 -08 000000031 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:05:39.163 -08 000000059 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:05:39.164 -08 000000031 INF: ======================================
17-02-28 20:05:39.164 -08 000000059 INF: ======================================
17-02-28 20:05:39.164 -08 000000092 INF: ======================================
17-02-28 20:05:39.166 -08 000000051 INF: ======================================
17-02-28 20:05:39.166 -08 000000036 INF: ======================================
17-02-28 20:05:39.167 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:39.168 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:39.168 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1102 Request: {"Cycle":2,"Lane":5,"Tile":1102,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF213","HCSMMF223","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.168 -08 000000055 INF: ======================================
17-02-28 20:05:39.170 -08 000000034 INF: ======================================
17-02-28 20:05:39.171 -08 000000068 INF: ======================================
17-02-28 20:05:39.216 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:39.224 -08 000000069 INF: FPGA: Recv ZSEL 
17-02-28 20:05:39.225 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:39.226 -08 000000081 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:05:39.226 -08 000000081 INF: X Motor: Xmit PR VI\n
17-02-28 20:05:39.226 -08 000000087 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:05:39.228 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:39.228 -08 000000083 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:39.228 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:39.280 -08 000000092 INF: FPGA: Recv TDIBB
17-02-28 20:05:39.281 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:05:39.282 -08 000000081 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:05:39.282 -08 000000081 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:05:39.282 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:39.282 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:39.282 -08 000000081 INF: X Motor: Moving to 80.7789 mm @15.000 mm/sec, started at 79.6787 mm
17-02-28 20:05:39.282 -08 000000081 INF: X Motor: Xmit MA 8921\n
17-02-28 20:05:39.282 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:05:39.283 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:39.285 -08 000000087 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:05:39.285 -08 000000087 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:05:39.285 -08 000000087 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:05:39.324 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1101 Request: {"Cycle":2,"Lane":5,"Tile":1101,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF218","HCSMMF276","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.325 -08 000000063 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1105 Request: {"Cycle":2,"Lane":5,"Tile":1105,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF183","HCSMMF244","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.326 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1112 Request: {"Cycle":2,"Lane":5,"Tile":1112,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF217","HCSMMF263","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.327 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1104 Request: {"Cycle":2,"Lane":5,"Tile":1104,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF259","HCSMMF254","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.329 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1107 Request: {"Cycle":2,"Lane":5,"Tile":1107,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF197","HCSMMF178","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.330 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1103 Request: {"Cycle":2,"Lane":5,"Tile":1103,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF231","HCSMMF185","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.331 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1115 Request: {"Cycle":2,"Lane":5,"Tile":1115,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF190","HCSMMF176","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.331 -08 000000094 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1106 Request: {"Cycle":2,"Lane":5,"Tile":1106,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF265","HCSMMF278","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.332 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1113 Request: {"Cycle":2,"Lane":5,"Tile":1113,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF201","HCSMMF211","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.333 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1111 Request: {"Cycle":2,"Lane":5,"Tile":1111,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF233","HCSMMF226","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.334 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1109 Request: {"Cycle":2,"Lane":5,"Tile":1109,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF266","HCSMMF247","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.335 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1108 Request: {"Cycle":2,"Lane":5,"Tile":1108,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF285","HCSMMF230","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.335 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1114 Request: {"Cycle":2,"Lane":5,"Tile":1114,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF256","HCSMMF232","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.336 -08 000000004 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1117 Request: {"Cycle":2,"Lane":5,"Tile":1117,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF280","HCSMMF258","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.337 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1116 Request: {"Cycle":2,"Lane":5,"Tile":1116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF214","HCSMMF250","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.337 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1110 Request: {"Cycle":2,"Lane":5,"Tile":1110,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF202","HCSMMF188","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.338 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1118 Request: {"Cycle":2,"Lane":5,"Tile":1118,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF221","HCSMMF281","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.338 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1120 Request: {"Cycle":2,"Lane":5,"Tile":1120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF264","HCSMMF200","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.339 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1121 Request: {"Cycle":2,"Lane":5,"Tile":1121,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF261","HCSMMF189","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.340 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1123 Request: {"Cycle":2,"Lane":5,"Tile":1123,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF177","HCSMMF180","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.341 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1119 Request: {"Cycle":2,"Lane":5,"Tile":1119,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF274","HCSMMF282","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.341 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1122 Request: {"Cycle":2,"Lane":5,"Tile":1122,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF229","HCSMMF219","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.343 -08 000000031 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1127 Request: {"Cycle":2,"Lane":5,"Tile":1127,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF195","HCSMMF284","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.344 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1128 Request: {"Cycle":2,"Lane":5,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF187","HCSMMF228","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.344 -08 000000039 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:39.344 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:39.345 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1124 Request: {"Cycle":2,"Lane":5,"Tile":1124,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF234","HCSMMF181","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.346 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:39.346 -08 000000083 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:39.346 -08 000000081 INF: X Motor: Recv MA 8921\r\n>
17-02-28 20:05:39.346 -08 000000083 INF: Y Motor: Set target position to 5955309 encoder counts
17-02-28 20:05:39.346 -08 000000083 INF: Y Motor: Xmit s r0xca 5955309\r
17-02-28 20:05:39.346 -08 000000087 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:05:39.346 -08 000000081 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:05:39.346 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:39.347 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1126 Request: {"Cycle":2,"Lane":5,"Tile":1126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF270","HCSMMF237","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.348 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1125 Request: {"Cycle":2,"Lane":5,"Tile":1125,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF240","HCSMMF184","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:39.348 -08 000000087 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:05:39.348 -08 000000087 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:05:39.348 -08 000000087 INF: Z Motor: Arming to move to -0.1173 mm
17-02-28 20:05:39.348 -08 000000087 INF: FPGA: Xmit ZYT 6435309 4\n
17-02-28 20:05:39.350 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.356 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:05:39.406 -08 000000080 INF: FPGA: Recv ZYT 
17-02-28 20:05:39.406 -08 000000087 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490543 enc / 14.905 mm / ) = 6435309 enc / 64.353 mm
17-02-28 20:05:39.406 -08 000000087 INF: FPGA: Xmit ZARM 30757\n
17-02-28 20:05:39.408 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:39.408 -08 000000083 INF: Y Motor: Start the move command
17-02-28 20:05:39.408 -08 000000083 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:39.437 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.437 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:05:39.466 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:39.471 -08 000000100 INF: FPGA: Recv ZARM
17-02-28 20:05:39.472 -08 000000087 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.6615 ms
17-02-28 20:05:39.472 -08 000000087 INF: Z Motor: ArmAbsStepped took 123.3951 ms
17-02-28 20:05:39.472 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:39.472 -08 000000083 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:05:39.472 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:39.472 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:39.473 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:05:39.474 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.475 -08 000000087 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:05:39.475 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:05:39.477 -08 000000087 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:05:39.477 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:05:39.478 -08 000000087 INF: ======================================
17-02-28 20:05:39.479 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:05:39.532 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:39.574 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.580 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:05:39.597 -08 000000083 INF: Y Motor: Unshifted Position: 1073334
17-02-28 20:05:39.647 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:39.705 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.711 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:05:39.759 -08 000000027 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:05:39.759 -08 000000027 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:05:39.759 -08 000000027 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:39.771 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:39.774 -08 000000027 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:39.776 -08 000000027 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:39.782 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:39.797 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:39.843 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:39.843 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:39.843 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:39.844 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:05:39.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left===================
17-02-28 20:05:39.908 -08 000000083 INF: Y Motor: Unshifted Position: 1778041
17-02-28 20:05:39.958 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:39.970 -08 000000081 INF: X Motor: Xmit PR ER\n
17-02-28 20:05:40.032 -08 000000081 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:05:40.032 -08 000000081 INF: X Motor: Moved to 80.7798 after 686 ms
17-02-28 20:05:40.032 -08 000000081 INF: ======================================
17-02-28 20:05:40.081 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:05:40.082 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:40.218 -08 000000083 INF: Y Motor: Unshifted Position: 2558066
17-02-28 20:05:40.268 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:40.378 -08 000000027 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:05:40.378 -08 000000027 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:05:40.379 -08 000000027 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:40.393 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:40.394 -08 000000027 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:05:40.396 -08 000000027 INF: ===================Camera Arm TDI===================
17-02-28 20:05:40.397 -08 000000027 INF: ======================================
17-02-28 20:05:40.398 -08 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:05:40.400 -08 000000084 INF: ======================================
17-02-28 20:05:40.530 -08 000000083 INF: Y Motor: Unshifted Position: 3338837
17-02-28 20:05:40.580 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:40.708 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:40.843 -08 000000083 INF: Y Motor: Unshifted Position: 4121409
17-02-28 20:05:40.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:40.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 4 of 5 seconds left===================
17-02-28 20:05:40.893 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:41.018 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:41.154 -08 000000083 INF: Y Motor: Unshifted Position: 4904688
17-02-28 20:05:41.204 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:41.332 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:41.466 -08 000000083 INF: Y Motor: Unshifted Position: 5678418
17-02-28 20:05:41.516 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:41.643 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:41.781 -08 000000083 INF: Y Motor: Unshifted Position: 5955311
17-02-28 20:05:41.781 -08 000000083 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:41.781 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:41.841 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:41.841 -08 000000083 INF: Y Motor: Moved to 64.5531 after 2369 ms
17-02-28 20:05:41.841 -08 000000083 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:41.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:41.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left===================
17-02-28 20:05:41.903 -08 000000083 INF: Y Motor: Recv v 4096\r
17-02-28 20:05:41.903 -08 000000083 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:41.903 -08 000000083 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:41.965 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:41.965 -08 000000083 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:41.965 -08 000000083 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:42.030 -08 000000083 INF: Y Motor: Recv v 402653184\r
17-02-28 20:05:42.030 -08 000000083 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:05:42.030 -08 000000083 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:42.030 -08 000000083 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:42.092 -08 000000083 INF: Y Motor: Recv v 0\r
17-02-28 20:05:42.092 -08 000000083 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:42.092 -08 000000083 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:42.092 -08 000000083 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:42.156 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:42.156 -08 000000083 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:42.156 -08 000000083 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:42.216 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:05:42.216 -08 000000083 INF: ======================================
17-02-28 20:05:42.218 -08 000000065 INF: ===================Move X,Y===================
17-02-28 20:05:42.219 -08 000000065 INF: ======================================
17-02-28 20:05:42.219 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:42.220 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:42.220 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:05:42.220 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:05:42.278 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:42.278 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:05:42.338 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:05:42.338 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:05:42.339 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:42.339 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:42.400 -08 000000034 INF: FPGA: Recv TDIYERD 6455310
17-02-28 20:05:42.400 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455310 counts (64.553 mm)
17-02-28 20:05:42.401 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:42.401 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:42.402 -08 000000062 INF: ===================TDI FPGA Arm===================
17-02-28 20:05:42.402 -08 000000004 INF: ===================Set YMotor gains for scans===================
17-02-28 20:05:42.402 -08 000000004 INF: ======================================
17-02-28 20:05:42.402 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:42.403 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:05:42.403 -08 000000062 INF: FPGA: Xmit TDIYPOS 6344384\n
17-02-28 20:05:42.465 -08 000000073 INF: FPGA: Recv TDIYPOS
17-02-28 20:05:42.465 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:42.467 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:05:42.467 -08 000000062 INF: FPGA: Xmit TDIYARM3 139264 6435309 1 1\n
17-02-28 20:05:42.528 -08 000000095 INF: FPGA: Recv TDIYARM3
17-02-28 20:05:42.528 -08 000000062 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:05:42.529 -08 000000062 INF: ===================TDI FPGA Arm===================
17-02-28 20:05:42.530 -08 000000062 INF: ======================================
17-02-28 20:05:42.531 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:42.532 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:42.532 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:42.533 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:42.533 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:42.534 -08 000000033 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:05:42.534 -08 000000027 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:05:42.534 -08 000000033 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:05:42.534 -08 000000033 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:05:42.534 -08 000000033 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:05:42.534 -08 000000027 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:05:42.534 -08 000000033 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:05:42.534 -08 000000027 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:05:42.534 -08 000000027 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:05:42.537 -08 000000027 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:05:42.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:42.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 2 of 5 seconds left===================
17-02-28 20:05:42.899 -08 000000034 INF: FPGA: Recv EX1MV
17-02-28 20:05:42.899 -08 000000034 INF: FPGA: Recv EX2MV
17-02-28 20:05:42.899 -08 000000027 INF: Excitation Filter 2: Moved -107 steps in 364.674 ms
17-02-28 20:05:42.899 -08 000000027 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 364.8842 ms
17-02-28 20:05:42.899 -08 000000027 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 364.9576 ms
17-02-28 20:05:42.899 -08 000000033 INF: Excitation Filter 1: Moved -107 steps in 364.8545 ms
17-02-28 20:05:42.899 -08 000000033 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.2602 ms
17-02-28 20:05:42.899 -08 000000033 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.3321 ms
17-02-28 20:05:42.900 -08 000000027 INF: ======================================
17-02-28 20:05:42.900 -08 000000033 INF: ======================================
17-02-28 20:05:42.901 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:42.902 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:42.903 -08 000000092 INF: ===================Camera TDI===================
17-02-28 20:05:42.903 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:42.903 -08 000000083 INF: ===================FPGA Z Wait===================
17-02-28 20:05:42.903 -08 000000094 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:42.903 -08 000000094 INF: Y Motor: Moving to 14.9048 mm @6.500 mm/sec, started at 64.5531 mm
17-02-28 20:05:42.903 -08 000000094 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:42.903 -08 000000094 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:42.903 -08 000000092 INF: ===================Camera TDI, Parallel===================
17-02-28 20:05:42.904 -08 000000047 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:05:42.904 -08 000000047 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:05:42.904 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:05:42.904 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:05:42.906 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:42.906 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:42.907 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:42.907 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:42.909 -08 000000083 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:05:42.967 -08 000000094 INF: Y Motor: Recv ok\r
17-02-28 20:05:42.967 -08 000000094 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:42.967 -08 000000094 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:43.028 -08 000000094 INF: Y Motor: Recv ok\r
17-02-28 20:05:43.028 -08 000000094 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:43.056 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:43.056 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:43.057 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:43.057 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:43.090 -08 000000094 INF: Y Motor: Recv v 0\r
17-02-28 20:05:43.090 -08 000000094 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:43.090 -08 000000094 INF: Y Motor: Set target position to 990475 encoder counts
17-02-28 20:05:43.090 -08 000000094 INF: Y Motor: Xmit s r0xca 990475\r
17-02-28 20:05:43.152 -08 000000094 INF: Y Motor: Recv ok\r
17-02-28 20:05:43.152 -08 000000094 INF: Y Motor: Start the move command
17-02-28 20:05:43.152 -08 000000094 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:43.206 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:43.206 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:43.207 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:43.207 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:43.214 -08 000000094 INF: Y Motor: Recv ok\r
17-02-28 20:05:43.214 -08 000000094 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:05:43.214 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:43.274 -08 000000058 INF: FPGA: Recv ZWAIT 
17-02-28 20:05:43.274 -08 000000083 INF: ======================================
17-02-28 20:05:43.339 -08 000000094 INF: Y Motor: Unshifted Position: 5893455
17-02-28 20:05:43.356 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:05:43.356 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:05:43.356 -08 000000039 INF: ===================Camera #0 Frame #4===================
17-02-28 20:05:43.357 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:43.357 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:43.357 -08 000000084 INF: ===================Camera #2 Frame #5===================
17-02-28 20:05:43.389 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:43.514 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:43.519 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:05:43.519 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:05:43.519 -08 000000039 INF: ===================Camera #0 Frame #10===================
17-02-28 20:05:43.523 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:05:43.523 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:05:43.523 -08 000000084 INF: ===================Camera #2 Frame #11===================
17-02-28 20:05:43.652 -08 000000094 INF: Y Motor: Unshifted Position: 5689359
17-02-28 20:05:43.687 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:05:43.687 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:05:43.687 -08 000000039 INF: ===================Camera #0 Frame #17===================
17-02-28 20:05:43.692 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:05:43.692 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:05:43.692 -08 000000084 INF: ===================Camera #2 Frame #17===================
17-02-28 20:05:43.702 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:43.826 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:43.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:43.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 1 of 5 seconds left===================
17-02-28 20:05:43.858 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:05:43.858 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:05:43.858 -08 000000039 INF: ===================Camera #0 Frame #23===================
17-02-28 20:05:43.861 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:05:43.861 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:05:43.861 -08 000000084 INF: ===================Camera #2 Frame #23===================
17-02-28 20:05:43.962 -08 000000094 INF: Y Motor: Unshifted Position: 5487863
17-02-28 20:05:44.012 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:44.026 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:05:44.026 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:05:44.026 -08 000000039 INF: ===================Camera #0 Frame #29===================
17-02-28 20:05:44.030 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:05:44.030 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:05:44.030 -08 000000084 INF: ===================Camera #2 Frame #29===================
17-02-28 20:05:44.139 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:44.194 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:05:44.194 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:05:44.194 -08 000000039 INF: ===================Camera #0 Frame #35===================
17-02-28 20:05:44.199 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:05:44.199 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:05:44.199 -08 000000084 INF: ===================Camera #2 Frame #36===================
17-02-28 20:05:44.275 -08 000000094 INF: Y Motor: Unshifted Position: 5284195
17-02-28 20:05:44.325 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:44.363 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:05:44.363 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:05:44.363 -08 000000039 INF: ===================Camera #0 Frame #42===================
17-02-28 20:05:44.372 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:05:44.372 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:05:44.372 -08 000000084 INF: ===================Camera #2 Frame #42===================
17-02-28 20:05:44.449 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:44.534 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:05:44.534 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:05:44.534 -08 000000039 INF: ===================Camera #0 Frame #48===================
17-02-28 20:05:44.541 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:05:44.541 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:05:44.541 -08 000000084 INF: ===================Camera #2 Frame #48===================
17-02-28 20:05:44.588 -08 000000094 INF: Y Motor: Unshifted Position: 5080521
17-02-28 20:05:44.638 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:44.704 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:05:44.704 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:05:44.704 -08 000000039 INF: ===================Camera #0 Frame #54===================
17-02-28 20:05:44.712 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:05:44.712 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:05:44.712 -08 000000084 INF: ===================Camera #2 Frame #54===================
17-02-28 20:05:44.763 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:44.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:44.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:44.844 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:05:44.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:44.874 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:05:44.874 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:05:44.874 -08 000000039 INF: ===================Camera #0 Frame #60===================
17-02-28 20:05:44.883 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:05:44.883 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:05:44.883 -08 000000084 INF: ===================Camera #2 Frame #61===================
17-02-28 20:05:44.898 -08 000000094 INF: Y Motor: Unshifted Position: 4879023
17-02-28 20:05:44.943 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:44.948 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.024 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF)
17-02-28 20:05:45.024 -08 000000018 INF: Current Position of Pump is: 9600
17-02-28 20:05:45.044 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:05:45.044 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:05:45.044 -08 000000039 INF: ===================Camera #0 Frame #67===================
17-02-28 20:05:45.056 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:05:45.056 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:05:45.056 -08 000000084 INF: ===================Camera #2 Frame #67===================
17-02-28 20:05:45.075 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.124 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:05:45.210 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF)
17-02-28 20:05:45.210 -08 000000018 INF: Current Position of Pump is: 9600
17-02-28 20:05:45.210 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC===================
17-02-28 20:05:45.211 -08 000000094 INF: Y Motor: Unshifted Position: 4674278
17-02-28 20:05:45.217 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:05:45.217 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:05:45.217 -08 000000039 INF: ===================Camera #0 Frame #73===================
17-02-28 20:05:45.226 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:05:45.226 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:05:45.226 -08 000000084 INF: ===================Camera #2 Frame #73===================
17-02-28 20:05:45.261 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.310 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD9600R\r
17-02-28 20:05:45.385 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.387 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:05:45.387 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:05:45.387 -08 000000039 INF: ===================Camera #0 Frame #79===================
17-02-28 20:05:45.396 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:45.397 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:05:45.397 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:05:45.397 -08 000000084 INF: ===================Camera #2 Frame #80===================
17-02-28 20:05:45.496 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:45.524 -08 000000094 INF: Y Motor: Unshifted Position: 4471897
17-02-28 20:05:45.557 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:05:45.557 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:05:45.557 -08 000000039 INF: ===================Camera #0 Frame #86===================
17-02-28 20:05:45.571 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:05:45.571 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:05:45.571 -08 000000084 INF: ===================Camera #2 Frame #86===================
17-02-28 20:05:45.574 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.585 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:45.698 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.730 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:05:45.730 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:05:45.730 -08 000000039 INF: ===================Camera #0 Frame #92===================
17-02-28 20:05:45.741 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:05:45.741 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:05:45.741 -08 000000084 INF: ===================Camera #2 Frame #92===================
17-02-28 20:05:45.834 -08 000000094 INF: Y Motor: Unshifted Position: 4270400
17-02-28 20:05:45.835 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:45.884 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:45.895 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:45.900 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:05:45.900 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:05:45.900 -08 000000039 INF: ===================Camera #0 Frame #98===================
17-02-28 20:05:45.912 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:05:45.912 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:05:45.912 -08 000000084 INF: ===================Camera #2 Frame #99===================
17-02-28 20:05:46.011 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:46.070 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:05:46.070 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:05:46.070 -08 000000039 INF: ===================Camera #0 Frame #104===================
17-02-28 20:05:46.086 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:05:46.086 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:05:46.086 -08 000000084 INF: ===================Camera #2 Frame #105===================
17-02-28 20:05:46.145 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:46.148 -08 000000094 INF: Y Motor: Unshifted Position: 4066077
17-02-28 20:05:46.199 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:46.210 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:46.241 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:05:46.241 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:05:46.241 -08 000000039 INF: ===================Camera #0 Frame #111===================
17-02-28 20:05:46.258 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:05:46.258 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:05:46.258 -08 000000084 INF: ===================Camera #2 Frame #111===================
17-02-28 20:05:46.323 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:46.414 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:05:46.414 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:05:46.414 -08 000000039 INF: ===================Camera #0 Frame #117===================
17-02-28 20:05:46.428 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:05:46.428 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:05:46.428 -08 000000084 INF: ===================Camera #2 Frame #118===================
17-02-28 20:05:46.459 -08 000000094 INF: Y Motor: Unshifted Position: 3864578
17-02-28 20:05:46.460 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:46.509 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:46.520 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:46.584 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:05:46.584 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:05:46.584 -08 000000039 INF: ===================Camera #0 Frame #123===================
17-02-28 20:05:46.602 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:05:46.602 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:05:46.602 -08 000000084 INF: ===================Camera #2 Frame #124===================
17-02-28 20:05:46.636 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:46.754 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:05:46.754 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:05:46.754 -08 000000039 INF: ===================Camera #0 Frame #130===================
17-02-28 20:05:46.770 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:46.772 -08 000000094 INF: Y Motor: Unshifted Position: 3660908
17-02-28 20:05:46.773 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:05:46.773 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:05:46.773 -08 000000084 INF: ===================Camera #2 Frame #130===================
17-02-28 20:05:46.822 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:46.833 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:46.927 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:05:46.927 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:05:46.927 -08 000000039 INF: ===================Camera #0 Frame #136===================
17-02-28 20:05:46.943 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:05:46.943 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:05:46.943 -08 000000084 INF: ===================Camera #2 Frame #137===================
17-02-28 20:05:46.946 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.083 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:47.085 -08 000000094 INF: Y Motor: Unshifted Position: 3457461
17-02-28 20:05:47.097 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:05:47.097 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:05:47.097 -08 000000039 INF: ===================Camera #0 Frame #142===================
17-02-28 20:05:47.117 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:05:47.117 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:05:47.117 -08 000000084 INF: ===================Camera #2 Frame #143===================
17-02-28 20:05:47.135 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.146 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:47.146 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:05:47.146 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:05:47.259 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.267 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:05:47.267 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:05:47.267 -08 000000039 INF: ===================Camera #0 Frame #148===================
17-02-28 20:05:47.287 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:05:47.287 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:05:47.287 -08 000000084 INF: ===================Camera #2 Frame #149===================
17-02-28 20:05:47.395 -08 000000094 INF: Y Motor: Unshifted Position: 3255742
17-02-28 20:05:47.437 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:05:47.437 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:05:47.437 -08 000000039 INF: ===================Camera #0 Frame #155===================
17-02-28 20:05:47.445 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.458 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:05:47.458 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:05:47.458 -08 000000084 INF: ===================Camera #2 Frame #155===================
17-02-28 20:05:47.572 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.610 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:05:47.610 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:05:47.610 -08 000000039 INF: ===================Camera #0 Frame #161===================
17-02-28 20:05:47.629 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:05:47.629 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:05:47.629 -08 000000084 INF: ===================Camera #2 Frame #162===================
17-02-28 20:05:47.708 -08 000000094 INF: Y Motor: Unshifted Position: 3052298
17-02-28 20:05:47.758 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.780 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:05:47.780 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:05:47.780 -08 000000039 INF: ===================Camera #0 Frame #167===================
17-02-28 20:05:47.803 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:05:47.803 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:05:47.803 -08 000000084 INF: ===================Camera #2 Frame #168===================
17-02-28 20:05:47.882 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:47.950 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:05:47.950 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:05:47.950 -08 000000039 INF: ===================Camera #0 Frame #174===================
17-02-28 20:05:47.974 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:05:47.974 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:05:47.974 -08 000000084 INF: ===================Camera #2 Frame #174===================
17-02-28 20:05:48.021 -08 000000094 INF: Y Motor: Unshifted Position: 2848640
17-02-28 20:05:48.071 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:48.123 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:05:48.123 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:05:48.123 -08 000000039 INF: ===================Camera #0 Frame #180===================
17-02-28 20:05:48.145 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:05:48.145 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:05:48.145 -08 000000084 INF: ===================Camera #2 Frame #181===================
17-02-28 20:05:48.195 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:48.246 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:05:48.293 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:05:48.293 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:05:48.293 -08 000000039 INF: ===================Camera #0 Frame #186===================
17-02-28 20:05:48.319 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:05:48.319 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:05:48.319 -08 000000084 INF: ===================Camera #2 Frame #187===================
17-02-28 20:05:48.330 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:48.331 -08 000000094 INF: Y Motor: Unshifted Position: 2646925
17-02-28 20:05:48.381 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:48.430 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:48.463 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:05:48.463 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:05:48.463 -08 000000039 INF: ===================Camera #0 Frame #192===================
17-02-28 20:05:48.490 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:05:48.490 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:05:48.490 -08 000000084 INF: ===================Camera #2 Frame #193===================
17-02-28 20:05:48.508 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:48.519 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:05:48.633 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:05:48.633 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:05:48.633 -08 000000039 INF: ===================Camera #0 Frame #199===================
17-02-28 20:05:48.644 -08 000000094 INF: Y Motor: Unshifted Position: 2443473
17-02-28 20:05:48.661 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:05:48.661 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:05:48.661 -08 000000084 INF: ===================Camera #2 Frame #200===================
17-02-28 20:05:48.694 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:48.769 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:05:48.806 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:05:48.806 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:05:48.806 -08 000000039 INF: ===================Camera #0 Frame #205===================
17-02-28 20:05:48.818 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:48.829 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:05:48.829 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:48.829 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:05:48.835 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:05:48.835 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:05:48.835 -08 000000084 INF: ===================Camera #2 Frame #206===================
17-02-28 20:05:48.957 -08 000000094 INF: Y Motor: Unshifted Position: 2240031
17-02-28 20:05:48.976 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:05:48.976 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:05:48.976 -08 000000039 INF: ===================Camera #0 Frame #211===================
17-02-28 20:05:49.004 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:05:49.004 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:05:49.004 -08 000000084 INF: ===================Camera #2 Frame #212===================
17-02-28 20:05:49.007 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.131 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.145 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:05:49.145 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:05:49.145 -08 000000039 INF: ===================Camera #0 Frame #218===================
17-02-28 20:05:49.175 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:05:49.175 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:05:49.175 -08 000000084 INF: ===================Camera #2 Frame #219===================
17-02-28 20:05:49.267 -08 000000094 INF: Y Motor: Unshifted Position: 2038313
17-02-28 20:05:49.317 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.318 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:05:49.318 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:05:49.318 -08 000000039 INF: ===================Camera #0 Frame #224===================
17-02-28 20:05:49.349 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:05:49.349 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:05:49.349 -08 000000084 INF: ===================Camera #2 Frame #225===================
17-02-28 20:05:49.444 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.487 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:05:49.487 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:05:49.487 -08 000000039 INF: ===================Camera #0 Frame #230===================
17-02-28 20:05:49.519 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:05:49.519 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:05:49.519 -08 000000084 INF: ===================Camera #2 Frame #231===================
17-02-28 20:05:49.574 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:49.575 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:49.575 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:49.576 -08 000000018 INF: WaitCommand(40000) start
17-02-28 20:05:49.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 40 of 40 seconds left===================
17-02-28 20:05:49.582 -08 000000094 INF: Y Motor: Unshifted Position: 1835942
17-02-28 20:05:49.632 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.657 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:05:49.657 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:05:49.657 -08 000000039 INF: ===================Camera #0 Frame #236===================
17-02-28 20:05:49.690 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:05:49.690 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:05:49.690 -08 000000084 INF: ===================Camera #2 Frame #238===================
17-02-28 20:05:49.756 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.827 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:05:49.827 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:05:49.827 -08 000000039 INF: ===================Camera #0 Frame #243===================
17-02-28 20:05:49.863 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:05:49.863 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:05:49.863 -08 000000084 INF: ===================Camera #2 Frame #244===================
17-02-28 20:05:49.892 -08 000000094 INF: Y Motor: Unshifted Position: 1631832
17-02-28 20:05:49.942 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:49.998 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:05:49.998 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:05:49.998 -08 000000039 INF: ===================Camera #0 Frame #249===================
17-02-28 20:05:50.034 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:05:50.034 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:05:50.034 -08 000000084 INF: ===================Camera #2 Frame #250===================
17-02-28 20:05:50.066 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:50.168 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:05:50.168 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:05:50.168 -08 000000039 INF: ===================Camera #0 Frame #255===================
17-02-28 20:05:50.205 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:05:50.205 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:05:50.205 -08 000000084 INF: ===================Camera #2 Frame #257===================
17-02-28 20:05:50.206 -08 000000094 INF: Y Motor: Unshifted Position: 1430122
17-02-28 20:05:50.256 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:50.337 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:05:50.337 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:05:50.337 -08 000000039 INF: ===================Camera #0 Frame #261===================
17-02-28 20:05:50.379 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:05:50.379 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:05:50.379 -08 000000084 INF: ===================Camera #2 Frame #263===================
17-02-28 20:05:50.380 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:50.507 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:05:50.507 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:05:50.507 -08 000000039 INF: ===================Camera #0 Frame #268===================
17-02-28 20:05:50.518 -08 000000094 INF: Y Motor: Unshifted Position: 1227305
17-02-28 20:05:50.550 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:05:50.550 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:05:50.550 -08 000000084 INF: ===================Camera #2 Frame #269===================
17-02-28 20:05:50.568 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:50.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:50.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 39 of 40 seconds left===================
17-02-28 20:05:50.640 -08 000000036 INF: FPGA: Recv TDIYWAIT
17-02-28 20:05:50.640 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:50.642 -08 000000047 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:05:50.643 -08 000000058 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:05:50.643 -08 000000063 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:05:50.643 -08 000000058 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:05:50.643 -08 000000058 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:05:50.643 -08 000000058 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:05:50.643 -08 000000063 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:05:50.643 -08 000000058 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:05:50.643 -08 000000063 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:05:50.643 -08 000000063 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:05:50.644 -08 000000063 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:05:50.680 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:50.680 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:50.680 -08 000000039 INF: ===================Camera #0 Frame #272===================
17-02-28 20:05:50.692 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:50.693 -08 000000039 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:50.694 -08 000000039 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:50.826 -08 000000039 INF: Camera #0 ReleaseBuffer
17-02-28 20:05:50.826 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:05:50.826 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:05:50.826 -08 000000084 INF: ===================Camera #2 Frame #272===================
17-02-28 20:05:50.827 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:05:50.828 -08 000000094 INF: Y Motor: Unshifted Position: 1022993
17-02-28 20:05:50.837 -08 000000084 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:05:50.838 -08 000000084 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:50.857 -08 000000039 INF: ======================================
17-02-28 20:05:50.878 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:51.008 -08 000000084 INF: Camera #2 ReleaseBuffer
17-02-28 20:05:51.008 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:05:51.012 -08 000000064 INF: FPGA: Recv EX2MV
17-02-28 20:05:51.012 -08 000000064 INF: FPGA: Recv EX1MV
17-02-28 20:05:51.012 -08 000000063 INF: Excitation Filter 1: Moved 107 steps in 368.8699 ms
17-02-28 20:05:51.012 -08 000000063 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.0055 ms
17-02-28 20:05:51.012 -08 000000063 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.0874 ms
17-02-28 20:05:51.012 -08 000000058 INF: Excitation Filter 2: Moved 107 steps in 369.06 ms
17-02-28 20:05:51.012 -08 000000058 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.2721 ms
17-02-28 20:05:51.012 -08 000000058 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.342 ms
17-02-28 20:05:51.012 -08 000000063 INF: ======================================
17-02-28 20:05:51.012 -08 000000058 INF: ======================================
17-02-28 20:05:51.013 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:51.014 -08 000000094 INF: Y Motor: Unshifted Position: 990474
17-02-28 20:05:51.014 -08 000000094 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:51.014 -08 000000094 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:51.015 -08 000000047 INF: ======================================
17-02-28 20:05:51.043 -08 000000084 INF: ======================================
17-02-28 20:05:51.044 -08 000000092 INF: ===================Camera TDI===================
17-02-28 20:05:51.045 -08 000000092 INF: ======================================
17-02-28 20:05:51.076 -08 000000094 INF: Y Motor: Recv v 0\r
17-02-28 20:05:51.076 -08 000000094 INF: Y Motor: Moved to 14.9047 after 7861 ms
17-02-28 20:05:51.076 -08 000000094 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:51.142 -08 000000094 INF: Y Motor: Recv v 4097\r
17-02-28 20:05:51.142 -08 000000094 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:51.142 -08 000000094 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:51.204 -08 000000094 INF: Y Motor: Recv v 0\r
17-02-28 20:05:51.204 -08 000000094 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:51.204 -08 000000094 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:51.266 -08 000000094 INF: Y Motor: Recv v 134217728\r
17-02-28 20:05:51.266 -08 000000094 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:05:51.266 -08 000000094 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:51.266 -08 000000094 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:51.328 -08 000000094 INF: Y Motor: Recv v 0\r
17-02-28 20:05:51.328 -08 000000094 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:51.328 -08 000000094 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:51.328 -08 000000094 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:51.390 -08 000000094 INF: Y Motor: Recv ok\r
17-02-28 20:05:51.390 -08 000000094 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:51.390 -08 000000094 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:51.454 -08 000000094 INF: Y Motor: Recv ok\r
17-02-28 20:05:51.454 -08 000000094 INF: ======================================
17-02-28 20:05:51.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:51.456 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:05:51.457 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.457 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:05:51.512 -08 000000101 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:05:51.512 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:51.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:51.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 38 of 40 seconds left===================
17-02-28 20:05:51.577 -08 000000099 INF: FPGA: Recv TDIYERD 1490476
17-02-28 20:05:51.577 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:05:51.636 -08 000000051 INF: FPGA: Recv ZADCR 36029
17-02-28 20:05:51.636 -08 000000042 INF: At scan end Y pos = 14.905 and Z pos = -0.138. Y moved -48.539 mm
17-02-28 20:05:51.636 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:05:51.699 -08 000000039 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:05:51.699 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:05:51.699 -08 000000042 INF: TDIScan finished after 12575.3009 ms
17-02-28 20:05:51.699 -08 000000042 INF: Image[0]: Y should trigger at 63.444 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:05:51.699 -08 000000042 INF: Image[2]: Y should trigger at 63.444 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:05:51.701 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.734 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.559 um
17-02-28 20:05:51.735 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.735 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:05:51.764 -08 000000063 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:05:51.764 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.765 -08 000000065 INF: ===================Dither Clean Up Command===================
17-02-28 20:05:51.765 -08 000000059 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:05:51.765 -08 000000031 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:05:51.765 -08 000000029 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:05:51.766 -08 000000059 INF: ======================================
17-02-28 20:05:51.766 -08 000000037 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:51.766 -08 000000081 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:05:51.766 -08 000000029 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:05:51.766 -08 000000037 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:05:51.766 -08 000000031 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:51.766 -08 000000031 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:51.766 -08 000000081 INF: ======================================
17-02-28 20:05:51.767 -08 000000029 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:05:51.823 -08 000000068 INF: FPGA: Recv ZSEL 
17-02-28 20:05:51.823 -08 000000068 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:51.823 -08 000000037 INF: FPGA: Xmit ZDACW 41243\n
17-02-28 20:05:51.823 -08 000000029 INF: ======================================
17-02-28 20:05:51.825 -08 000000031 INF: Y Motor: Recv ok\r
17-02-28 20:05:51.825 -08 000000031 INF: ======================================
17-02-28 20:05:51.888 -08 000000090 INF: FPGA: Recv ZDACW 
17-02-28 20:05:51.888 -08 000000037 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:05:51.888 -08 000000037 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:05:51.950 -08 000000101 INF: FPGA: Recv TDIBB
17-02-28 20:05:51.950 -08 000000037 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:05:51.951 -08 000000037 INF: ======================================
17-02-28 20:05:51.952 -08 000000065 INF: ======================================
17-02-28 20:05:51.953 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:05:51.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:05:51.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:05:51.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:05:51.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:05:51.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:05:51.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:05:51.956 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 38 of 40 seconds left, Waiting for image analysis===================
17-02-28 20:05:51.956 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 38 of 40 seconds left===================
17-02-28 20:05:51.956 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:05:51.956 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:05:51.979 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:05:51.979 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:51.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:51.980 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:05:51.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:51.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 5===================
17-02-28 20:05:51.981 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface===================
17-02-28 20:05:51.998 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:51.999 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:51.999 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:05:51.999 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:05:52.054 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1207 Request: {"Cycle":2,"Lane":5,"Tile":1207,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF207","HCSMMF185","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.096 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:52.162 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:52.162 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:05:52.163 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:05:52.259 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1205 Request: {"Cycle":2,"Lane":5,"Tile":1205,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF284","HCSMMF273","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.262 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1203 Request: {"Cycle":2,"Lane":5,"Tile":1203,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF231","HCSMMF271","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.268 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1208 Request: {"Cycle":2,"Lane":5,"Tile":1208,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF245","HCSMMF236","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.287 -08 000000065 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1210 Request: {"Cycle":2,"Lane":5,"Tile":1210,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF282","HCSMMF259","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.288 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1204 Request: {"Cycle":2,"Lane":5,"Tile":1204,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF228","HCSMMF252","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.289 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1216 Request: {"Cycle":2,"Lane":5,"Tile":1216,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF225","HCSMMF180","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.291 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1209 Request: {"Cycle":2,"Lane":5,"Tile":1209,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF203","HCSMMF194","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.292 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1213 Request: {"Cycle":2,"Lane":5,"Tile":1213,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF223","HCSMMF202","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.292 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1202 Request: {"Cycle":2,"Lane":5,"Tile":1202,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF184","HCSMMF181","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.293 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1215 Request: {"Cycle":2,"Lane":5,"Tile":1215,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF255","HCSMMF226","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.294 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1201 Request: {"Cycle":2,"Lane":5,"Tile":1201,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF241","HCSMMF272","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.294 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1211 Request: {"Cycle":2,"Lane":5,"Tile":1211,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF254","HCSMMF242","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.295 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1206 Request: {"Cycle":2,"Lane":5,"Tile":1206,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF176","HCSMMF253","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.296 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1220 Request: {"Cycle":2,"Lane":5,"Tile":1220,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF266","HCSMMF191","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.296 -08 000000027 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1217 Request: {"Cycle":2,"Lane":5,"Tile":1217,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF177","HCSMMF224","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.297 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1225 Request: {"Cycle":2,"Lane":5,"Tile":1225,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF251","HCSMMF250","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.298 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1219 Request: {"Cycle":2,"Lane":5,"Tile":1219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF227","HCSMMF205","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.298 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1218 Request: {"Cycle":2,"Lane":5,"Tile":1218,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF265","HCSMMF239","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.299 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1226 Request: {"Cycle":2,"Lane":5,"Tile":1226,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF208","HCSMMF214","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.300 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1224 Request: {"Cycle":2,"Lane":5,"Tile":1224,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF217","HCSMMF218","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.301 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1222 Request: {"Cycle":2,"Lane":5,"Tile":1222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF211","HCSMMF201","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.302 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1223 Request: {"Cycle":2,"Lane":5,"Tile":1223,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF215","HCSMMF262","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.304 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1212 Request: {"Cycle":2,"Lane":5,"Tile":1212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF213","HCSMMF279","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.304 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1214 Request: {"Cycle":2,"Lane":5,"Tile":1214,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF178","HCSMMF196","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.306 -08 000000096 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1227 Request: {"Cycle":2,"Lane":5,"Tile":1227,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF216","HCSMMF285","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.308 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1228 Request: {"Cycle":2,"Lane":5,"Tile":1228,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF221","HCSMMF281","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.310 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 2 Tile: 1221 Request: {"Cycle":2,"Lane":5,"Tile":1221,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF257","HCSMMF277","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:05:52.311 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:52.318 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:05:52.410 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:52.410 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:05:52.447 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:52.453 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:05:52.545 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:52.550 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:05:52.556 -08 000000047 INF: FPGA: Recv MIOCOMPR
17-02-28 20:05:52.556 -08 000000042 INF: Compensator: Moved OutOfPath in 393 ms
17-02-28 20:05:52.556 -08 000000042 INF: Lane 6, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.393944, m3=5.33908
17-02-28 20:05:52.557 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:52.558 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:52.559 -08 000000051 INF: ===================Move Tilt Motor 1===================
17-02-28 20:05:52.559 -08 000000100 INF: ===================Move Tilt Motor 3===================
17-02-28 20:05:52.559 -08 000000090 INF: ===================Move Tilt Motor 2===================
17-02-28 20:05:52.559 -08 000000051 INF: ======================================
17-02-28 20:05:52.559 -08 000000090 INF: ======================================
17-02-28 20:05:52.559 -08 000000100 INF: ======================================
17-02-28 20:05:52.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:52.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6===================
17-02-28 20:05:52.567 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:05:52.576 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:05:52.576 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:05:52.576 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:05:52.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:52.576 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:05:52.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 37 of 40 seconds left===================
17-02-28 20:05:52.576 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:05:52.579 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:05:52.580 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:05:52.580 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:05:52.622 -08 000000084 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:52.622 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:05:52.623 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:05:52.623 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1573 mm
17-02-28 20:05:52.623 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:05:52.639 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:52.645 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:05:52.681 -08 000000074 INF: FPGA: Recv ZTRG 
17-02-28 20:05:52.681 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:05:52.731 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:05:52.746 -08 000000087 INF: FPGA: Recv ZYT 
17-02-28 20:05:52.746 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:05:52.746 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:05:52.808 -08 000000096 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:05:52.808 -08 000000096 INF: FPGA: Recv ZMV 
17-02-28 20:05:52.808 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:05:52.808 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9918 ms
17-02-28 20:05:52.808 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:05:52.870 -08 000000046 INF: FPGA: Recv ZDACR 60292
17-02-28 20:05:52.870 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.3346 ms w/comms
17-02-28 20:05:52.870 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:05:52.870 -08 000000042 INF: Z Motor: MoveAbsStepped took 247.5471 ms
17-02-28 20:05:52.871 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:05:52.871 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:05:52.880 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:05:52.880 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:52.880 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:52.880 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:05:52.880 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:05:52.932 -08 000000073 INF: FPGA: Recv ZSTEP 
17-02-28 20:05:52.943 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:05:52.943 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:05:52.952 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:05:52.952 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:52.952 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:05:52.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:52.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:05:52.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:52.954 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = F_1
17-02-28 20:05:52.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:52.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:52.956 -08 000000064 INF: ===================MoveEmissionFilters===================
17-02-28 20:05:52.956 -08 000000053 INF: ===================Move X,Y===================
17-02-28 20:05:52.957 -08 000000053 INF: ===================Move X,Y, Parallel===================
17-02-28 20:05:52.957 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:52.957 -08 000000009 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:52.957 -08 000000093 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:52.957 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:52.958 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:52.958 -08 000000046 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:52.958 -08 000000093 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:52.958 -08 000000051 INF: ===================Move X Motor without settling===================
17-02-28 20:05:52.958 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:05:52.958 -08 000000051 INF: X Motor: Xmit PR VM\n
17-02-28 20:05:52.958 -08 000000046 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9047 mm
17-02-28 20:05:52.958 -08 000000046 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:52.958 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:52.959 -08 000000087 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:05:52.959 -08 000000100 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:05:52.959 -08 000000084 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:05:52.959 -08 000000062 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:05:52.959 -08 000000084 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:05:52.959 -08 000000062 INF: ======================================
17-02-28 20:05:52.959 -08 000000087 INF: ======================================
17-02-28 20:05:52.959 -08 000000084 INF: ======================================
17-02-28 20:05:52.960 -08 000000100 INF: ======================================
17-02-28 20:05:52.961 -08 000000009 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:05:52.961 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:05:52.961 -08 000000093 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:05:52.961 -08 000000084 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:05:52.961 -08 000000070 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:05:52.962 -08 000000083 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:05:52.962 -08 000000085 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:05:52.962 -08 000000070 INF: ======================================
17-02-28 20:05:52.962 -08 000000084 INF: ======================================
17-02-28 20:05:52.962 -08 000000085 INF: ======================================
17-02-28 20:05:52.963 -08 000000093 INF: ======================================
17-02-28 20:05:52.963 -08 000000047 INF: ======================================
17-02-28 20:05:52.963 -08 000000009 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:05:52.965 -08 000000009 INF: ======================================
17-02-28 20:05:52.965 -08 000000083 INF: ======================================
17-02-28 20:05:52.966 -08 000000101 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:05:52.967 -08 000000101 INF: ======================================
17-02-28 20:05:52.968 -08 000000064 INF: ======================================
17-02-28 20:05:52.996 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:05:52.996 -08 000000046 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:52.996 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:52.998 -08 000000051 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:05:52.998 -08 000000051 INF: X Motor: Xmit PR VI\n
17-02-28 20:05:53.049 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:05:53.058 -08 000000051 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:05:53.058 -08 000000051 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:05:53.058 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:05:53.058 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:53.058 -08 000000051 INF: X Motor: Moving to 83.0106 mm @15.000 mm/sec, started at 80.7798 mm
17-02-28 20:05:53.058 -08 000000051 INF: X Motor: Xmit MA 9835\n
17-02-28 20:05:53.120 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:05:53.120 -08 000000046 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:53.120 -08 000000046 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:05:53.120 -08 000000046 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:05:53.122 -08 000000051 INF: X Motor: Recv MA 9835\r\n>
17-02-28 20:05:53.122 -08 000000051 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:05:53.184 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:05:53.184 -08 000000046 INF: Y Motor: Start the move command
17-02-28 20:05:53.184 -08 000000046 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:53.250 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:05:53.250 -08 000000046 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:05:53.250 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:53.371 -08 000000046 INF: Y Motor: Unshifted Position: 1073240
17-02-28 20:05:53.421 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:53.545 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:53.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:53.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 36 of 40 seconds left===================
17-02-28 20:05:53.681 -08 000000046 INF: Y Motor: Unshifted Position: 1774640
17-02-28 20:05:53.731 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:53.747 -08 000000051 INF: X Motor: Xmit PR ER\n
17-02-28 20:05:53.808 -08 000000051 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:05:53.808 -08 000000051 INF: X Motor: Moved to 83.0112 after 686 ms
17-02-28 20:05:53.808 -08 000000051 INF: ======================================
17-02-28 20:05:53.859 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:53.996 -08 000000046 INF: Y Motor: Unshifted Position: 2563000
17-02-28 20:05:54.046 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:54.168 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:54.305 -08 000000046 INF: Y Motor: Unshifted Position: 3335435
17-02-28 20:05:54.355 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:54.482 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:54.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:54.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 35 of 40 seconds left===================
17-02-28 20:05:54.620 -08 000000046 INF: Y Motor: Unshifted Position: 4118842
17-02-28 20:05:54.670 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:54.792 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:54.929 -08 000000046 INF: Y Motor: Unshifted Position: 4897110
17-02-28 20:05:54.979 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:55.106 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:55.244 -08 000000046 INF: Y Motor: Unshifted Position: 5678224
17-02-28 20:05:55.294 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:55.416 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:55.553 -08 000000046 INF: Y Motor: Unshifted Position: 5953352
17-02-28 20:05:55.553 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:55.553 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:55.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:55.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 34 of 40 seconds left===================
17-02-28 20:05:55.618 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:05:55.618 -08 000000046 INF: Y Motor: Moved to 64.5335 after 2368 ms
17-02-28 20:05:55.618 -08 000000046 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:55.680 -08 000000046 INF: Y Motor: Recv v 4096\r
17-02-28 20:05:55.680 -08 000000046 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:55.680 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:55.742 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:05:55.742 -08 000000046 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:55.742 -08 000000046 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:55.804 -08 000000046 INF: Y Motor: Recv v 402653184\r
17-02-28 20:05:55.804 -08 000000046 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:05:55.804 -08 000000046 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:55.804 -08 000000046 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:55.866 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:05:55.866 -08 000000046 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:55.866 -08 000000046 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:55.866 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:55.928 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:05:55.928 -08 000000046 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:55.928 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:55.990 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:05:55.990 -08 000000046 INF: ======================================
17-02-28 20:05:55.991 -08 000000053 INF: ===================Move X,Y===================
17-02-28 20:05:55.993 -08 000000053 INF: ======================================
17-02-28 20:05:55.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:05:55.995 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:55.995 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:05:55.995 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:05:56.056 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:05:56.056 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:05:56.113 -08 000000099 INF: FPGA: Recv ZFREQCL
17-02-28 20:05:56.113 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:05:56.114 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:56.114 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:56.116 -08 000000101 INF: RunCopyService queue size at 2/28/2017 8:05:56 PM is 2
17-02-28 20:05:56.176 -08 000000062 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:05:56.176 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:05:56.176 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:56.177 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:56.178 -08 000000073 INF: ===================Set YMotor gains for scans===================
17-02-28 20:05:56.178 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:05:56.178 -08 000000073 INF: ======================================
17-02-28 20:05:56.179 -08 000000047 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:05:56.179 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:05:56.180 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:05:56.181 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:05:56.181 -08 000000047 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:05:56.241 -08 000000053 INF: FPGA: Recv TDIYPOS
17-02-28 20:05:56.241 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:05:56.243 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:05:56.243 -08 000000047 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:05:56.303 -08 000000033 INF: FPGA: Recv TDIYARM2
17-02-28 20:05:56.303 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:05:56.305 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:05:56.306 -08 000000047 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:05:56.306 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:05:56.308 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:05:56.308 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:05:56.309 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:56.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:56.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 33 of 40 seconds left===================
17-02-28 20:05:56.675 -08 000000047 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:05:56.675 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:05:56.675 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:56.690 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:05:56.692 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:05:57.070 -08 000000047 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:05:57.070 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:05:57.070 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:05:57.086 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:05:57.087 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:05:57.089 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:05:57.090 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:57.091 -08 000000047 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:05:57.091 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:57.093 -08 000000047 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:05:57.093 -08 000000047 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:05:57.093 -08 000000047 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:05:57.093 -08 000000047 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:05:57.114 -08 000000009 INF: FPGA: Recv ZYT 
17-02-28 20:05:57.114 -08 000000047 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:05:57.114 -08 000000047 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:05:57.175 -08 000000066 INF: FPGA: Recv ZARM
17-02-28 20:05:57.175 -08 000000047 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.5664 ms
17-02-28 20:05:57.175 -08 000000047 INF: Z Motor: ArmAbsStepped took 82.6929 ms
17-02-28 20:05:57.176 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:05:57.177 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:05:57.178 -08 000000047 INF: ======================================
17-02-28 20:05:57.179 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:05:57.180 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:57.180 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:57.181 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:57.182 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:57.182 -08 000000034 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:05:57.182 -08 000000046 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:05:57.182 -08 000000034 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:05:57.183 -08 000000034 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:05:57.183 -08 000000034 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:05:57.183 -08 000000046 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:05:57.183 -08 000000034 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:05:57.183 -08 000000046 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:05:57.183 -08 000000046 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:05:57.184 -08 000000046 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:05:57.551 -08 000000068 INF: FPGA: Recv EX2MV
17-02-28 20:05:57.551 -08 000000068 INF: FPGA: Recv EX1MV
17-02-28 20:05:57.551 -08 000000046 INF: Excitation Filter 1: Moved -107 steps in 368.2308 ms
17-02-28 20:05:57.551 -08 000000034 INF: Excitation Filter 2: Moved -107 steps in 368.4225 ms
17-02-28 20:05:57.551 -08 000000034 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.5209 ms
17-02-28 20:05:57.551 -08 000000034 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.6292 ms
17-02-28 20:05:57.551 -08 000000046 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.3699 ms
17-02-28 20:05:57.551 -08 000000046 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.746 ms
17-02-28 20:05:57.551 -08 000000034 INF: ======================================
17-02-28 20:05:57.552 -08 000000046 INF: ======================================
17-02-28 20:05:57.553 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:57.554 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:57.555 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:05:57.555 -08 000000077 INF: ===================Move Y Motor without settling===================
17-02-28 20:05:57.555 -08 000000010 INF: ===================Serial===================
17-02-28 20:05:57.555 -08 000000077 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:05:57.555 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:05:57.555 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:57.556 -08 000000053 INF: ===================Camera TDI, Parallel===================
17-02-28 20:05:57.556 -08 000000080 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:57.556 -08 000000010 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:05:57.556 -08 000000010 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:05:57.557 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:05:57.557 -08 000000009 INF: ===================Camera TDI===================
17-02-28 20:05:57.557 -08 000000080 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:05:57.557 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:57.557 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:57.558 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:57.558 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:57.560 -08 000000080 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:05:57.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:57.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 32 of 40 seconds left===================
17-02-28 20:05:57.615 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:05:57.615 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:05:57.615 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:57.677 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:05:57.677 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:57.708 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:57.708 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:57.708 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:57.708 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:57.739 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:05:57.739 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:57.739 -08 000000077 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:05:57.739 -08 000000077 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:05:57.801 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:05:57.801 -08 000000077 INF: Y Motor: Start the move command
17-02-28 20:05:57.801 -08 000000077 INF: Y Motor: Xmit t 1\r
17-02-28 20:05:57.858 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:57.858 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:57.858 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:57.858 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:57.863 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:05:57.863 -08 000000077 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:05:57.863 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:57.990 -08 000000077 INF: Y Motor: Unshifted Position: 5935230
17-02-28 20:05:58.008 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:58.008 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:58.008 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:05:58.008 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:05:58.040 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:58.158 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:05:58.158 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:05:58.158 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:05:58.158 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:05:58.158 -08 000000009 INF: ===================Camera #2 Frame #1===================
17-02-28 20:05:58.158 -08 000000047 INF: ===================Camera #0 Frame #1===================
17-02-28 20:05:58.165 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:58.300 -08 000000077 INF: Y Motor: Unshifted Position: 5888228
17-02-28 20:05:58.311 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:05:58.311 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:05:58.311 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:05:58.311 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:05:58.311 -08 000000047 INF: ===================Camera #0 Frame #3===================
17-02-28 20:05:58.311 -08 000000009 INF: ===================Camera #2 Frame #3===================
17-02-28 20:05:58.350 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:58.468 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:05:58.468 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:05:58.468 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:05:58.468 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:05:58.468 -08 000000009 INF: ===================Camera #2 Frame #4===================
17-02-28 20:05:58.468 -08 000000047 INF: ===================Camera #0 Frame #4===================
17-02-28 20:05:58.477 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:58.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:58.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 31 of 40 seconds left===================
17-02-28 20:05:58.614 -08 000000077 INF: Y Motor: Unshifted Position: 5841669
17-02-28 20:05:58.621 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:58.621 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:58.621 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:05:58.621 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:05:58.621 -08 000000009 INF: ===================Camera #2 Frame #5===================
17-02-28 20:05:58.621 -08 000000047 INF: ===================Camera #0 Frame #5===================
17-02-28 20:05:58.664 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:58.674 -08 000000004 INF: FPGA: Recv ZWAIT 
17-02-28 20:05:58.674 -08 000000004 INF: FPGA: Recv TDIYWAIT
17-02-28 20:05:58.674 -08 000000010 INF: ===================Serial===================
17-02-28 20:05:58.674 -08 000000080 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:58.676 -08 000000010 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:05:58.676 -08 000000080 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:05:58.676 -08 000000010 INF: ===================Serial===================
17-02-28 20:05:58.677 -08 000000096 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:05:58.677 -08 000000090 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:05:58.677 -08 000000096 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:05:58.677 -08 000000096 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:05:58.677 -08 000000096 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:05:58.677 -08 000000090 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:05:58.677 -08 000000096 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:05:58.677 -08 000000090 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:05:58.677 -08 000000090 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:05:58.677 -08 000000010 INF: ======================================
17-02-28 20:05:58.680 -08 000000090 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:05:58.774 -08 000000009 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:05:58.774 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:05:58.774 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:05:58.774 -08 000000009 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:05:58.774 -08 000000047 INF: ===================Camera #0 Frame #6===================
17-02-28 20:05:58.774 -08 000000009 INF: ===================Camera #2 Frame #6===================
17-02-28 20:05:58.777 -08 000000047 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:05:58.777 -08 000000009 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:05:58.778 -08 000000009 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:58.781 -08 000000047 INF: ===================CameraTDI Cleanup===================
17-02-28 20:05:58.788 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:58.816 -08 000000009 INF: Camera #2 ReleaseBuffer
17-02-28 20:05:58.816 -08 000000009 INF: ===================Camera TDI===================
17-02-28 20:05:58.817 -08 000000009 INF: ======================================
17-02-28 20:05:58.826 -08 000000047 INF: Camera #0 ReleaseBuffer
17-02-28 20:05:58.826 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:05:58.827 -08 000000047 INF: ======================================
17-02-28 20:05:58.828 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:05:58.830 -08 000000053 INF: ======================================
17-02-28 20:05:58.924 -08 000000077 INF: Y Motor: Unshifted Position: 5797059
17-02-28 20:05:58.974 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:05:59.049 -08 000000074 INF: FPGA: Recv EX1MV
17-02-28 20:05:59.049 -08 000000074 INF: FPGA: Recv EX2MV
17-02-28 20:05:59.049 -08 000000090 INF: Excitation Filter 2: Moved 107 steps in 371.4163 ms
17-02-28 20:05:59.049 -08 000000090 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.5549 ms
17-02-28 20:05:59.049 -08 000000090 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.6269 ms
17-02-28 20:05:59.049 -08 000000096 INF: Excitation Filter 1: Moved 107 steps in 371.6371 ms
17-02-28 20:05:59.049 -08 000000096 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.8447 ms
17-02-28 20:05:59.049 -08 000000096 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.9165 ms
17-02-28 20:05:59.049 -08 000000090 INF: ======================================
17-02-28 20:05:59.049 -08 000000096 INF: ======================================
17-02-28 20:05:59.051 -08 000000080 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:05:59.052 -08 000000080 INF: ======================================
17-02-28 20:05:59.113 -08 000000077 INF: Y Motor: Unshifted Position: 5797041
17-02-28 20:05:59.113 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:05:59.113 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:59.175 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:05:59.175 -08 000000077 INF: Y Motor: Moved to 62.9704 after 1312 ms
17-02-28 20:05:59.175 -08 000000077 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:05:59.237 -08 000000077 INF: Y Motor: Recv v 4097\r
17-02-28 20:05:59.237 -08 000000077 INF: Y Motor: Status After move finished OK:
17-02-28 20:05:59.237 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:05:59.299 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:05:59.299 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:05:59.299 -08 000000077 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:05:59.361 -08 000000077 INF: Y Motor: Recv v 134217728\r
17-02-28 20:05:59.361 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:05:59.361 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:05:59.361 -08 000000077 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:05:59.423 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:05:59.423 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:05:59.423 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:05:59.423 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:05:59.485 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:05:59.485 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:05:59.485 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:05:59.550 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:05:59.550 -08 000000077 INF: ======================================
17-02-28 20:05:59.551 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:59.552 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:05:59.553 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:59.553 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:05:59.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:05:59.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 30 of 40 seconds left===================
17-02-28 20:05:59.611 -08 000000069 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:05:59.611 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:05:59.673 -08 000000054 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:05:59.673 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:05:59.735 -08 000000047 INF: FPGA: Recv ZADCR 2423
17-02-28 20:05:59.735 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:05:59.735 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:05:59.797 -08 000000004 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:05:59.797 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:05:59.797 -08 000000042 INF: TDIScan finished after 6853.6212 ms
17-02-28 20:05:59.797 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:05:59.797 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:05:59.798 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:05:59.859 -08 000000077 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:05:59.860 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:59.860 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #2, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:05:59.861 -08 000000069 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:05:59.861 -08 000000010 INF: ===================Set Y Motor Motor Velocity=================