17-02-28 20:21:34.180 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4=================== 17-02-28 20:21:34.181 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle=================== 17-02-28 20:21:34.182 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:21:34.182 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:21:34.182 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:21:34.182 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:34.220 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:21:34.220 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Selecting Reagent HB2 (5)=================== 17-02-28 20:21:34.220 -08 000000018 INF: Valve A1: Go to position 5 17-02-28 20:21:34.220 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-02-28 20:21:34.285 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 3\r 17-02-28 20:21:34.285 -08 000000018 INF: Valve A1: 631.158 seconds since last move, > 10.000 seconds required between moves 17-02-28 20:21:34.285 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 3 to 5 17-02-28 20:21:34.285 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW5\r 17-02-28 20:21:34.285 -08 000000018 INF: SerialPort A1 (VICIA1): Recv (discarded) 17-02-28 20:21:34.285 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-02-28 20:21:34.470 -08 000000104 INF: FPGA: Recv MIOCOMPR 17-02-28 20:21:34.470 -08 000000042 INF: Compensator: Moved OutOfPath in 371 ms 17-02-28 20:21:34.471 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:34.471 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:34.472 -08 000000086 INF: ===================Move Tilt Motor 1=================== 17-02-28 20:21:34.472 -08 000000066 INF: ===================Move Tilt Motor 3=================== 17-02-28 20:21:34.472 -08 000000086 INF: Tilt Motor 1: Moving to 5.0768 mm, started at 5.0005 mm, delta = 0.0763 mm 17-02-28 20:21:34.472 -08 000000086 INF: FPGA: Xmit T1RD\n 17-02-28 20:21:34.472 -08 000000066 INF: Tilt Motor 3: Moving to 5.2105 mm, started at 5.3391 mm, delta = -0.1286 mm 17-02-28 20:21:34.473 -08 000000058 INF: ===================Move Tilt Motor 2=================== 17-02-28 20:21:34.473 -08 000000058 INF: Tilt Motor 2: Moving to 5.2636 mm, started at 5.3924 mm, delta = -0.1288 mm 17-02-28 20:21:34.474 -08 000000058 INF: FPGA: Xmit T2RD\n 17-02-28 20:21:34.475 -08 000000066 INF: FPGA: Xmit T3RD\n 17-02-28 20:21:34.532 -08 000000051 INF: FPGA: Recv T1RD 19687 17-02-28 20:21:34.532 -08 000000051 INF: FPGA: Recv T2RD 21230 17-02-28 20:21:34.532 -08 000000051 INF: FPGA: Recv T3RD 21020 17-02-28 20:21:34.532 -08 000000066 INF: Tilt Motor 3: Encoder: at motor step 3503 + 2/6 17-02-28 20:21:34.532 -08 000000086 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6 17-02-28 20:21:34.532 -08 000000086 INF: Tilt Motor 1: Moving to 19987 encoder counts 17-02-28 20:21:34.532 -08 000000066 INF: Tilt Motor 3: Moving to 20514 encoder counts 17-02-28 20:21:34.532 -08 000000058 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6 17-02-28 20:21:34.532 -08 000000058 INF: Tilt Motor 2: Moving to 20723 encoder counts 17-02-28 20:21:34.532 -08 000000086 INF: FPGA: Xmit T1MOVETO 19987\n 17-02-28 20:21:34.535 -08 000000066 INF: FPGA: Xmit T3MOVETO 20514\n 17-02-28 20:21:34.536 -08 000000058 INF: FPGA: Xmit T2MOVETO 20723\n 17-02-28 20:21:34.657 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 5\r 17-02-28 20:21:34.657 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:21:34.657 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 17-02-28 20:21:34.718 -08 000000045 INF: FPGA: Recv T1MOVETO 50 17-02-28 20:21:34.718 -08 000000086 INF: Tilt Motor 1: To move from 5.000 to 5.077 (0.076 mm) should take 50 steps, but required 50 steps (0.076 mm). Slippage = 0.000 mm (0.00%) 17-02-28 20:21:34.718 -08 000000086 INF: FPGA: Xmit T1RD\n 17-02-28 20:21:34.780 -08 000000057 INF: FPGA: Recv T1RD 19985 17-02-28 20:21:34.780 -08 000000057 INF: FPGA: Recv T3MOVETO 84 17-02-28 20:21:34.780 -08 000000057 INF: FPGA: Recv T2MOVETO 84 17-02-28 20:21:34.780 -08 000000058 INF: Tilt Motor 2: To move from 5.392 to 5.264 (-0.129 mm) should take 84 steps, but required 84 steps (0.128 mm). Slippage = 0.000 mm (0.00%) 17-02-28 20:21:34.780 -08 000000058 INF: FPGA: Xmit T2RD\n 17-02-28 20:21:34.780 -08 000000066 INF: Tilt Motor 3: To move from 5.339 to 5.210 (-0.129 mm) should take 84 steps, but required 84 steps (0.128 mm). Slippage = 0.000 mm (0.00%) 17-02-28 20:21:34.780 -08 000000086 INF: Tilt Motor 1: Encoder: at motor step 3330 + 5/6 17-02-28 20:21:34.781 -08 000000086 INF: FPGA: Xmit T1RD\n 17-02-28 20:21:34.783 -08 000000066 INF: FPGA: Xmit T3RD\n 17-02-28 20:21:34.842 -08 000000087 INF: FPGA: Recv T2RD 20725 17-02-28 20:21:34.842 -08 000000087 INF: FPGA: Recv T1RD 19985 17-02-28 20:21:34.842 -08 000000087 INF: FPGA: Recv T3RD 20517 17-02-28 20:21:34.842 -08 000000086 INF: Tilt Motor 1: Encoder: at motor step 3330 + 5/6 17-02-28 20:21:34.842 -08 000000086 INF: FPGA: Xmit T1RD\n 17-02-28 20:21:34.842 -08 000000066 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6 17-02-28 20:21:34.842 -08 000000058 INF: Tilt Motor 2: Encoder: at motor step 3454 + 1/6 17-02-28 20:21:34.843 -08 000000058 INF: FPGA: Xmit T2RD\n 17-02-28 20:21:34.845 -08 000000066 INF: FPGA: Xmit T3RD\n 17-02-28 20:21:34.908 -08 000000108 INF: FPGA: Recv T1RD 19985 17-02-28 20:21:34.908 -08 000000108 INF: FPGA: Recv T2RD 20725 17-02-28 20:21:34.908 -08 000000108 INF: FPGA: Recv T3RD 20517 17-02-28 20:21:34.908 -08 000000066 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6 17-02-28 20:21:34.908 -08 000000058 INF: Tilt Motor 2: Encoder: at motor step 3454 + 1/6 17-02-28 20:21:34.908 -08 000000066 INF: FPGA: Xmit T3RD\n 17-02-28 20:21:34.909 -08 000000086 INF: Tilt Motor 1: Encoder: at motor step 3330 + 5/6 17-02-28 20:21:34.909 -08 000000086 INF: Tilt Motor 1: After move to 5.0768, error = -0.0006, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:21:34.909 -08 000000086 INF: Tilt Motor 1: Moved to 5.0762 after 436.4015 ms 17-02-28 20:21:34.909 -08 000000086 INF: ====================================== 17-02-28 20:21:34.911 -08 000000058 INF: FPGA: Xmit T2RD\n 17-02-28 20:21:34.975 -08 000000095 INF: FPGA: Recv T3RD 20517 17-02-28 20:21:34.975 -08 000000095 INF: FPGA: Recv T2RD 20725 17-02-28 20:21:34.975 -08 000000066 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6 17-02-28 20:21:34.976 -08 000000066 INF: Tilt Motor 3: After move to 5.2105, error = 0.0008, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:21:34.976 -08 000000066 INF: Tilt Motor 3: Moved to 5.2113 after 503.2647 ms 17-02-28 20:21:34.976 -08 000000058 INF: Tilt Motor 2: Encoder: at motor step 3454 + 1/6 17-02-28 20:21:34.976 -08 000000058 INF: Tilt Motor 2: After move to 5.2636, error = 0.0006, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:21:34.976 -08 000000058 INF: Tilt Motor 2: Moved to 5.2642 after 503.2529 ms 17-02-28 20:21:34.976 -08 000000066 INF: ====================================== 17-02-28 20:21:34.976 -08 000000058 INF: ====================================== 17-02-28 20:21:34.977 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:34.978 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:34.979 -08 000000042 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.07675395464298, m2=5.2635772251359, m3=5.2104912251359 17-02-28 20:21:34.985 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm. 17-02-28 20:21:34.993 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm. 17-02-28 20:21:34.993 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-02-28 20:21:34.994 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-02-28 20:21:34.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-02-28 20:21:34.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-02-28 20:21:34.998 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0 17-02-28 20:21:34.998 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format 17-02-28 20:21:34.998 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n 17-02-28 20:21:35.032 -08 000000104 INF: FPGA: Recv ZSTEP 17-02-28 20:21:35.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-02-28 20:21:35.033 -08 000000042 INF: Z Motor: Entering MoveAbsStepped 17-02-28 20:21:35.033 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.0776 mm 17-02-28 20:21:35.033 -08 000000042 INF: FPGA: Xmit ZTRG 0\n 17-02-28 20:21:35.094 -08 000000047 INF: FPGA: Recv ZTRG 17-02-28 20:21:35.094 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n 17-02-28 20:21:35.156 -08 000000046 INF: FPGA: Recv ZYT 17-02-28 20:21:35.156 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-02-28 20:21:35.156 -08 000000042 INF: FPGA: Xmit ZMV 60292\n 17-02-28 20:21:35.218 -08 000000078 INF: FPGA: Recv @LOG Trigger Camera 17-02-28 20:21:35.218 -08 000000078 INF: FPGA: Recv ZMV 17-02-28 20:21:35.218 -08 000000006 INF: FPGA: Trigger Camera 17-02-28 20:21:35.218 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.007 ms 17-02-28 20:21:35.218 -08 000000042 INF: FPGA: Xmit ZDACR\n 17-02-28 20:21:35.280 -08 000000072 INF: FPGA: Recv ZDACR 60292 17-02-28 20:21:35.280 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.3113 ms w/comms 17-02-28 20:21:35.280 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:21:35.280 -08 000000042 INF: Z Motor: MoveAbsStepped took 247.5018 ms 17-02-28 20:21:35.281 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-02-28 20:21:35.281 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm. 17-02-28 20:21:35.290 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-02-28 20:21:35.290 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:21:35.290 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:21:35.290 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format 17-02-28 20:21:35.290 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n 17-02-28 20:21:35.340 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:21:35.341 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)=================== 17-02-28 20:21:35.341 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:35.342 -08 000000059 INF: FPGA: Recv ZSTEP 17-02-28 20:21:35.352 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-02-28 20:21:35.353 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm. 17-02-28 20:21:35.361 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-02-28 20:21:35.361 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:21:35.361 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:21:35.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:35.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Populating image tags=================== 17-02-28 20:21:35.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:35.364 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = A_1 17-02-28 20:21:35.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-02-28 20:21:35.365 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-02-28 20:21:35.366 -08 000000034 INF: ===================MoveEmissionFilters=================== 17-02-28 20:21:35.366 -08 000000105 INF: ===================Move X,Y=================== 17-02-28 20:21:35.366 -08 000000105 INF: ===================Move X,Y, Parallel=================== 17-02-28 20:21:35.366 -08 000000073 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:21:35.367 -08 000000082 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:21:35.367 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:21:35.367 -08 000000090 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:21:35.367 -08 000000046 INF: ===================Move X Motor without settling=================== 17-02-28 20:21:35.367 -08 000000108 INF: ===================Move Y Motor without settling=================== 17-02-28 20:21:35.367 -08 000000073 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:21:35.367 -08 000000046 INF: X Motor: Xmit PR VM\n 17-02-28 20:21:35.367 -08 000000082 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:21:35.368 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:21:35.368 -08 000000090 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:21:35.368 -08 000000089 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-02-28 20:21:35.368 -08 000000085 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-02-28 20:21:35.368 -08 000000108 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.8490 mm 17-02-28 20:21:35.368 -08 000000045 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-02-28 20:21:35.368 -08 000000108 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:21:35.368 -08 000000108 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:21:35.368 -08 000000069 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-02-28 20:21:35.369 -08 000000036 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-02-28 20:21:35.369 -08 000000010 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-02-28 20:21:35.369 -08 000000072 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-02-28 20:21:35.369 -08 000000099 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-02-28 20:21:35.369 -08 000000045 INF: ====================================== 17-02-28 20:21:35.369 -08 000000069 INF: ====================================== 17-02-28 20:21:35.369 -08 000000036 INF: ====================================== 17-02-28 20:21:35.370 -08 000000099 INF: ====================================== 17-02-28 20:21:35.370 -08 000000010 INF: ====================================== 17-02-28 20:21:35.370 -08 000000082 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:21:35.371 -08 000000090 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:21:35.371 -08 000000085 INF: ====================================== 17-02-28 20:21:35.371 -08 000000082 INF: ====================================== 17-02-28 20:21:35.372 -08 000000089 INF: ====================================== 17-02-28 20:21:35.372 -08 000000072 INF: Emission Filter 12: Remaining IntoPath 17-02-28 20:21:35.372 -08 000000072 INF: ====================================== 17-02-28 20:21:35.373 -08 000000090 INF: ====================================== 17-02-28 20:21:35.373 -08 000000073 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:21:35.373 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:21:35.374 -08 000000073 INF: ====================================== 17-02-28 20:21:35.375 -08 000000047 INF: ====================================== 17-02-28 20:21:35.376 -08 000000034 INF: ====================================== 17-02-28 20:21:35.405 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:21:35.406 -08 000000108 INF: Y Motor: Recv ok\r 17-02-28 20:21:35.406 -08 000000108 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:21:35.406 -08 000000108 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:21:35.406 -08 000000046 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-02-28 20:21:35.406 -08 000000046 INF: X Motor: Xmit PR VI\n 17-02-28 20:21:35.413 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000 17-02-28 20:21:35.468 -08 000000108 INF: Y Motor: Recv ok\r 17-02-28 20:21:35.468 -08 000000108 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:21:35.468 -08 000000046 INF: X Motor: Recv PR VI\r\n410\r\n> 17-02-28 20:21:35.468 -08 000000046 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-02-28 20:21:35.468 -08 000000046 INF: X Motor: Moving to 69.1856 mm @15.000 mm/sec, started at 26.0679 mm 17-02-28 20:21:35.468 -08 000000046 INF: X Motor: Xmit MA 4172\n 17-02-28 20:21:35.505 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:21:35.534 -08 000000046 INF: X Motor: Recv MA 4172\r\n> 17-02-28 20:21:35.534 -08 000000046 INF: X Motor: WaitUntilStopped 62875 17-02-28 20:21:35.536 -08 000000108 INF: Y Motor: Recv v 0\r 17-02-28 20:21:35.536 -08 000000108 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:21:35.536 -08 000000108 INF: Y Motor: Set target position to 5953351 encoder counts 17-02-28 20:21:35.536 -08 000000108 INF: Y Motor: Xmit s r0xca 5953351\r 17-02-28 20:21:35.595 -08 000000108 INF: Y Motor: Recv ok\r 17-02-28 20:21:35.595 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 17-02-28 20:21:35.595 -08 000000018 INF: Current Position of Pump is: 0 17-02-28 20:21:35.595 -08 000000108 INF: Y Motor: Start the move command 17-02-28 20:21:35.595 -08 000000108 INF: Y Motor: Xmit t 1\r 17-02-28 20:21:35.659 -08 000000108 INF: Y Motor: Recv ok\r 17-02-28 20:21:35.659 -08 000000108 INF: Y Motor: WaitUntilStopped 61987 17-02-28 20:21:35.659 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:35.695 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r 17-02-28 20:21:35.781 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:35.784 -08 000000108 INF: Y Motor: Unshifted Position: 1067671 17-02-28 20:21:35.834 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:35.881 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:35.905 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:35.956 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:36.092 -08 000000108 INF: Y Motor: Unshifted Position: 1769891 17-02-28 20:21:36.142 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:36.155 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:36.218 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:21:36.268 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:36.319 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r 17-02-28 20:21:36.406 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:36.407 -08 000000108 INF: Y Motor: Unshifted Position: 2554908 17-02-28 20:21:36.457 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:36.507 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:36.530 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:21:36.530 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Aspirating port PortB=================== 17-02-28 20:21:36.581 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:36.630 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP18240R\r 17-02-28 20:21:36.717 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:36.718 -08 000000108 INF: Y Motor: Unshifted Position: 3333210 17-02-28 20:21:36.771 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:36.817 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:36.893 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:36.907 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:37.029 -08 000000108 INF: Y Motor: Unshifted Position: 4123262 17-02-28 20:21:37.079 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:37.157 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:37.206 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:37.216 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:37.343 -08 000000108 INF: Y Motor: Unshifted Position: 4891514 17-02-28 20:21:37.393 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:37.466 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:37.517 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:37.529 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:37.653 -08 000000108 INF: Y Motor: Unshifted Position: 5670643 17-02-28 20:21:37.703 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:37.779 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:37.830 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:37.841 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:37.965 -08 000000108 INF: Y Motor: Unshifted Position: 5953350 17-02-28 20:21:37.965 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:21:37.965 -08 000000108 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:21:38.028 -08 000000108 INF: Y Motor: Recv v 0\r 17-02-28 20:21:38.028 -08 000000108 INF: Y Motor: Moved to 64.5335 after 2368 ms 17-02-28 20:21:38.028 -08 000000108 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:21:38.090 -08 000000108 INF: Y Motor: Recv v 4096\r 17-02-28 20:21:38.090 -08 000000108 INF: Y Motor: Status After move finished OK: 17-02-28 20:21:38.090 -08 000000108 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:21:38.091 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:38.154 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:38.155 -08 000000108 INF: Y Motor: Recv v 0\r 17-02-28 20:21:38.155 -08 000000108 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:21:38.155 -08 000000108 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:21:38.217 -08 000000108 INF: Y Motor: Recv v 402653184\r 17-02-28 20:21:38.217 -08 000000108 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-02-28 20:21:38.217 -08 000000108 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:21:38.217 -08 000000108 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:21:38.279 -08 000000108 INF: Y Motor: Recv v 0\r 17-02-28 20:21:38.279 -08 000000108 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:21:38.279 -08 000000108 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:21:38.279 -08 000000108 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:21:38.341 -08 000000108 INF: Y Motor: Recv ok\r 17-02-28 20:21:38.341 -08 000000108 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:21:38.341 -08 000000108 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:21:38.402 -08 000000108 INF: Y Motor: Recv ok\r 17-02-28 20:21:38.402 -08 000000108 INF: ====================================== 17-02-28 20:21:38.404 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:38.463 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:38.715 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:38.775 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:38.965 -08 000000046 INF: X Motor: Xmit PR ER\n 17-02-28 20:21:39.032 -08 000000046 INF: X Motor: Recv PR ER\r\n0\r\n> 17-02-28 20:21:39.032 -08 000000046 INF: X Motor: Moved to 69.1855 after 3497 ms 17-02-28 20:21:39.032 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:39.032 -08 000000046 INF: ====================================== 17-02-28 20:21:39.034 -08 000000105 INF: ===================Move X,Y=================== 17-02-28 20:21:39.036 -08 000000105 INF: ====================================== 17-02-28 20:21:39.037 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-02-28 20:21:39.038 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:39.038 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec 17-02-28 20:21:39.038 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r 17-02-28 20:21:39.089 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:39.093 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:21:39.093 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n 17-02-28 20:21:39.151 -08 000000023 INF: FPGA: Recv ZFREQCL 17-02-28 20:21:39.152 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions=================== 17-02-28 20:21:39.152 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:39.152 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:21:39.212 -08 000000099 INF: FPGA: Recv TDIYERD 6453352 17-02-28 20:21:39.212 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm) 17-02-28 20:21:39.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:21:39.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:21:39.214 -08 000000045 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:39.214 -08 000000101 INF: ===================Set YMotor gains for scans=================== 17-02-28 20:21:39.215 -08 000000101 INF: ====================================== 17-02-28 20:21:39.215 -08 000000045 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-02-28 20:21:39.215 -08 000000045 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:39.217 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-02-28 20:21:39.217 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-02-28 20:21:39.217 -08 000000045 INF: FPGA: Xmit TDIYPOS 6433351\n 17-02-28 20:21:39.277 -08 000000066 INF: FPGA: Recv TDIYPOS 17-02-28 20:21:39.277 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-02-28 20:21:39.279 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI=================== 17-02-28 20:21:39.279 -08 000000045 INF: FPGA: Xmit TDIYARM2 3072 1 1\n 17-02-28 20:21:39.336 -08 000000082 INF: FPGA: Recv TDIYARM2 17-02-28 20:21:39.336 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-02-28 20:21:39.337 -08 000000045 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:39.339 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:39.339 -08 000000045 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-02-28 20:21:39.339 -08 000000045 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:39.341 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-02-28 20:21:39.342 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-02-28 20:21:39.342 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:21:39.401 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:39.651 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:39.709 -08 000000045 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-02-28 20:21:39.709 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072 17-02-28 20:21:39.709 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:21:39.712 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:39.724 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-02-28 20:21:39.726 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:21:39.962 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:40.025 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:40.107 -08 000000045 INF: Camera #2 AttachBuffer (imageDataPtr = 53895782648 imgPtr = 53955604608 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-02-28 20:21:40.107 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072 17-02-28 20:21:40.107 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:21:40.122 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-02-28 20:21:40.124 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-02-28 20:21:40.125 -08 000000045 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:40.126 -08 000000045 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:21:40.127 -08 000000045 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-02-28 20:21:40.127 -08 000000045 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:21:40.129 -08 000000045 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-02-28 20:21:40.129 -08 000000045 INF: Z Motor: Entering ArmAbsStepped 17-02-28 20:21:40.129 -08 000000045 INF: Z Motor: Arming to move to -0.0100 mm 17-02-28 20:21:40.129 -08 000000045 INF: FPGA: Xmit ZYT 0 2\n 17-02-28 20:21:40.151 -08 000000099 INF: FPGA: Recv ZYT 17-02-28 20:21:40.152 -08 000000045 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines) 17-02-28 20:21:40.152 -08 000000045 INF: FPGA: Xmit ZARM 2621\n 17-02-28 20:21:40.211 -08 000000047 INF: FPGA: Recv ZARM 17-02-28 20:21:40.211 -08 000000045 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.4386 ms 17-02-28 20:21:40.211 -08 000000045 INF: Z Motor: ArmAbsStepped took 82.2816 ms 17-02-28 20:21:40.212 -08 000000045 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:21:40.213 -08 000000045 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:40.214 -08 000000045 INF: ====================================== 17-02-28 20:21:40.215 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:21:40.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:40.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:40.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:40.217 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:40.218 -08 000000073 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-02-28 20:21:40.218 -08 000000073 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-02-28 20:21:40.218 -08 000000073 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-02-28 20:21:40.218 -08 000000046 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-02-28 20:21:40.218 -08 000000073 INF: Excitation Filter 2: Moving -107 steps 17-02-28 20:21:40.218 -08 000000073 INF: FPGA: Xmit EX2MV -107\n 17-02-28 20:21:40.218 -08 000000046 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-02-28 20:21:40.218 -08 000000046 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-02-28 20:21:40.218 -08 000000046 INF: Excitation Filter 1: Moving -107 steps 17-02-28 20:21:40.221 -08 000000046 INF: FPGA: Xmit EX1MV -107\n 17-02-28 20:21:40.275 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:40.336 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:40.585 -08 000000090 INF: FPGA: Recv EX2MV 17-02-28 20:21:40.585 -08 000000073 INF: Excitation Filter 2: Moved -107 steps in 366.8873 ms 17-02-28 20:21:40.585 -08 000000073 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.0131 ms 17-02-28 20:21:40.585 -08 000000073 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.0903 ms 17-02-28 20:21:40.585 -08 000000073 INF: ====================================== 17-02-28 20:21:40.586 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:40.648 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:40.649 -08 000000085 INF: FPGA: Recv EX1MV 17-02-28 20:21:40.650 -08 000000046 INF: Excitation Filter 1: Moved -107 steps in 431.1898 ms 17-02-28 20:21:40.650 -08 000000046 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 431.3524 ms 17-02-28 20:21:40.650 -08 000000046 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 431.4296 ms 17-02-28 20:21:40.650 -08 000000046 INF: ====================================== 17-02-28 20:21:40.651 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:40.653 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:40.654 -08 000000035 INF: ===================Camera TDI=================== 17-02-28 20:21:40.654 -08 000000095 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:21:40.654 -08 000000047 INF: ===================Move Y Motor without settling=================== 17-02-28 20:21:40.654 -08 000000066 INF: ===================Serial=================== 17-02-28 20:21:40.654 -08 000000047 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm 17-02-28 20:21:40.654 -08 000000047 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:21:40.654 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:21:40.654 -08 000000035 INF: ===================Camera TDI, Parallel=================== 17-02-28 20:21:40.654 -08 000000095 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-02-28 20:21:40.655 -08 000000095 INF: FPGA: Xmit TDIYWAIT\n 17-02-28 20:21:40.655 -08 000000066 INF: ===================Serial, FPGA Z Wait=================== 17-02-28 20:21:40.655 -08 000000090 INF: ===================Camera TDI=================== 17-02-28 20:21:40.655 -08 000000037 INF: ===================Camera TDI=================== 17-02-28 20:21:40.656 -08 000000066 INF: FPGA: Xmit ZWAIT\n 17-02-28 20:21:40.656 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:40.656 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:40.657 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:40.657 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:40.713 -08 000000047 INF: Y Motor: Recv ok\r 17-02-28 20:21:40.713 -08 000000047 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:21:40.713 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:21:40.775 -08 000000047 INF: Y Motor: Recv ok\r 17-02-28 20:21:40.775 -08 000000047 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:21:40.806 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:40.806 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:40.807 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:40.807 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:40.836 -08 000000047 INF: Y Motor: Recv v 0\r 17-02-28 20:21:40.836 -08 000000047 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:21:40.836 -08 000000047 INF: Y Motor: Set target position to 5797042 encoder counts 17-02-28 20:21:40.836 -08 000000047 INF: Y Motor: Xmit s r0xca 5797042\r 17-02-28 20:21:40.898 -08 000000047 INF: Y Motor: Recv ok\r 17-02-28 20:21:40.898 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:40.898 -08 000000047 INF: Y Motor: Start the move command 17-02-28 20:21:40.898 -08 000000047 INF: Y Motor: Xmit t 1\r 17-02-28 20:21:40.956 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:40.956 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:40.957 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:40.957 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:40.959 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:40.960 -08 000000047 INF: Y Motor: Recv ok\r 17-02-28 20:21:40.960 -08 000000047 INF: Y Motor: WaitUntilStopped 61042 17-02-28 20:21:40.960 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:41.085 -08 000000047 INF: Y Motor: Unshifted Position: 5935084 17-02-28 20:21:41.106 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:41.106 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:41.107 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:41.107 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:41.135 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:41.209 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:41.256 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-02-28 20:21:41.256 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-02-28 20:21:41.256 -08 000000037 INF: ===================Camera #2 Frame #1=================== 17-02-28 20:21:41.257 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-02-28 20:21:41.257 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-02-28 20:21:41.257 -08 000000090 INF: ===================Camera #0 Frame #1=================== 17-02-28 20:21:41.260 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:41.273 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:41.400 -08 000000047 INF: Y Motor: Unshifted Position: 5888277 17-02-28 20:21:41.410 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-02-28 20:21:41.410 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-02-28 20:21:41.410 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-02-28 20:21:41.410 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-02-28 20:21:41.410 -08 000000090 INF: ===================Camera #0 Frame #3=================== 17-02-28 20:21:41.410 -08 000000037 INF: ===================Camera #2 Frame #3=================== 17-02-28 20:21:41.450 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:41.523 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:41.566 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-02-28 20:21:41.566 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-02-28 20:21:41.566 -08 000000090 INF: ===================Camera #0 Frame #4=================== 17-02-28 20:21:41.567 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-02-28 20:21:41.567 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-02-28 20:21:41.567 -08 000000037 INF: ===================Camera #2 Frame #4=================== 17-02-28 20:21:41.572 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:41.585 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:41.711 -08 000000047 INF: Y Motor: Unshifted Position: 5841420 17-02-28 20:21:41.719 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:21:41.719 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:21:41.719 -08 000000090 INF: ===================Camera #0 Frame #5=================== 17-02-28 20:21:41.721 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:21:41.721 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:21:41.721 -08 000000037 INF: ===================Camera #2 Frame #5=================== 17-02-28 20:21:41.761 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:41.771 -08 000000030 INF: FPGA: Recv ZWAIT 17-02-28 20:21:41.771 -08 000000030 INF: FPGA: Recv TDIYWAIT 17-02-28 20:21:41.771 -08 000000095 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:21:41.771 -08 000000066 INF: ===================Serial=================== 17-02-28 20:21:41.773 -08 000000095 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-02-28 20:21:41.773 -08 000000066 INF: ===================Serial, Confirm position Z Motor=================== 17-02-28 20:21:41.773 -08 000000066 INF: ===================Serial=================== 17-02-28 20:21:41.774 -08 000000051 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-02-28 20:21:41.774 -08 000000085 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-02-28 20:21:41.774 -08 000000051 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-02-28 20:21:41.774 -08 000000051 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-02-28 20:21:41.774 -08 000000051 INF: Excitation Filter 1: Moving 107 steps 17-02-28 20:21:41.774 -08 000000051 INF: FPGA: Xmit EX1MV 107\n 17-02-28 20:21:41.774 -08 000000085 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-02-28 20:21:41.774 -08 000000085 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-02-28 20:21:41.774 -08 000000085 INF: Excitation Filter 2: Moving 107 steps 17-02-28 20:21:41.774 -08 000000066 INF: ====================================== 17-02-28 20:21:41.775 -08 000000085 INF: FPGA: Xmit EX2MV 107\n 17-02-28 20:21:41.835 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:41.872 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-02-28 20:21:41.872 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-02-28 20:21:41.872 -08 000000090 INF: ===================Camera #0 Frame #6=================== 17-02-28 20:21:41.874 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-02-28 20:21:41.874 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-02-28 20:21:41.874 -08 000000037 INF: ===================Camera #2 Frame #6=================== 17-02-28 20:21:41.875 -08 000000090 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-02-28 20:21:41.876 -08 000000090 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:21:41.877 -08 000000037 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-02-28 20:21:41.878 -08 000000037 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:21:41.885 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:41.897 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:41.899 -08 000000090 INF: Camera #0 ReleaseBuffer 17-02-28 20:21:41.899 -08 000000090 INF: ===================Camera TDI=================== 17-02-28 20:21:41.900 -08 000000090 INF: ====================================== 17-02-28 20:21:41.925 -08 000000037 INF: Camera #2 ReleaseBuffer 17-02-28 20:21:41.925 -08 000000037 INF: ===================Camera TDI=================== 17-02-28 20:21:41.927 -08 000000037 INF: ====================================== 17-02-28 20:21:41.928 -08 000000035 INF: ===================Camera TDI=================== 17-02-28 20:21:41.929 -08 000000035 INF: ====================================== 17-02-28 20:21:42.021 -08 000000047 INF: Y Motor: Unshifted Position: 5797064 17-02-28 20:21:42.071 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:42.146 -08 000000077 INF: FPGA: Recv EX1MV 17-02-28 20:21:42.146 -08 000000077 INF: FPGA: Recv EX2MV 17-02-28 20:21:42.146 -08 000000085 INF: Excitation Filter 2: Moved 107 steps in 371.9032 ms 17-02-28 20:21:42.146 -08 000000051 INF: Excitation Filter 1: Moved 107 steps in 372.1347 ms 17-02-28 20:21:42.146 -08 000000051 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.2488 ms 17-02-28 20:21:42.146 -08 000000051 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.321 ms 17-02-28 20:21:42.146 -08 000000085 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.0192 ms 17-02-28 20:21:42.146 -08 000000085 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.4385 ms 17-02-28 20:21:42.147 -08 000000051 INF: ====================================== 17-02-28 20:21:42.147 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:42.147 -08 000000085 INF: ====================================== 17-02-28 20:21:42.148 -08 000000095 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:21:42.149 -08 000000095 INF: ====================================== 17-02-28 20:21:42.209 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:42.210 -08 000000047 INF: Y Motor: Unshifted Position: 5797043 17-02-28 20:21:42.210 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:21:42.210 -08 000000047 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:21:42.272 -08 000000047 INF: Y Motor: Recv v 0\r 17-02-28 20:21:42.272 -08 000000047 INF: Y Motor: Moved to 62.9704 after 1312 ms 17-02-28 20:21:42.272 -08 000000047 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:21:42.333 -08 000000047 INF: Y Motor: Recv v 4097\r 17-02-28 20:21:42.333 -08 000000047 INF: Y Motor: Status After move finished OK: 17-02-28 20:21:42.333 -08 000000047 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:21:42.395 -08 000000047 INF: Y Motor: Recv v 0\r 17-02-28 20:21:42.395 -08 000000047 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:21:42.395 -08 000000047 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:21:42.459 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:42.460 -08 000000047 INF: Y Motor: Recv v 134217728\r 17-02-28 20:21:42.460 -08 000000047 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-02-28 20:21:42.460 -08 000000047 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:21:42.460 -08 000000047 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:21:42.521 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:42.522 -08 000000047 INF: Y Motor: Recv v 0\r 17-02-28 20:21:42.522 -08 000000047 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:21:42.522 -08 000000047 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:21:42.522 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:21:42.584 -08 000000047 INF: Y Motor: Recv ok\r 17-02-28 20:21:42.584 -08 000000047 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:21:42.584 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:21:42.646 -08 000000047 INF: Y Motor: Recv ok\r 17-02-28 20:21:42.646 -08 000000047 INF: ====================================== 17-02-28 20:21:42.647 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:42.648 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:42.649 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:42.649 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-02-28 20:21:42.706 -08 000000066 INF: FPGA: Recv TDICLINES 1023 17-02-28 20:21:42.706 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:21:42.770 -08 000000046 INF: FPGA: Recv TDIYERD 6297043 17-02-28 20:21:42.770 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-02-28 20:21:42.771 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:42.832 -08 000000090 INF: FPGA: Recv ZADCR 2421 17-02-28 20:21:42.832 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm 17-02-28 20:21:42.832 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-02-28 20:21:42.834 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:42.895 -08 000000046 INF: FPGA: Recv TDIPULSES 3073 17-02-28 20:21:42.895 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072 17-02-28 20:21:42.895 -08 000000042 INF: TDIScan finished after 7541.9645 ms 17-02-28 20:21:42.895 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-02-28 20:21:42.895 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-02-28 20:21:42.896 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-02-28 20:21:42.957 -08 000000037 INF: FPGA: Recv SWOOF_RDSTAT 0 17-02-28 20:21:42.957 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:42.958 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:42.959 -08 000000109 INF: ===================Set Y Motor Motor Velocity=================== 17-02-28 20:21:42.959 -08 000000101 INF: ===================Set Z Motor Motor Velocity=================== 17-02-28 20:21:42.959 -08 000000078 INF: ===================Set YMotor gains for fast moves=================== 17-02-28 20:21:42.959 -08 000000109 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:21:42.959 -08 000000109 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:21:42.959 -08 000000101 INF: ====================================== 17-02-28 20:21:42.960 -08 000000078 INF: ====================================== 17-02-28 20:21:43.020 -08 000000109 INF: Y Motor: Recv ok\r 17-02-28 20:21:43.020 -08 000000109 INF: ====================================== 17-02-28 20:21:43.021 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:43.022 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:43.023 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(A)=================== 17-02-28 20:21:43.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:43.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(G)=================== 17-02-28 20:21:43.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:43.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(T)=================== 17-02-28 20:21:43.084 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:43.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:43.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(C)=================== 17-02-28 20:21:43.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:21:43.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-02-28 20:21:43.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-02-28 20:21:43.142 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, ETF: Extracting coords=================== 17-02-28 20:21:43.144 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:43.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-02-28 20:21:43.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point=================== 17-02-28 20:21:43.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point, Extracting metrics=================== 17-02-28 20:21:43.394 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:43.457 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:43.707 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:43.768 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:43.843 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point=================== 17-02-28 20:21:43.866 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0796040457299298Best Z position at top surface = -0.152872062663185Best Z position at top surface + compensator offset = -0.130172062663185 C:3,L:1,T 17-02-28 20:21:43.867 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.152872062663185 17-02-28 20:21:43.867 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94244 17-02-28 20:21:43.867 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0796040457299298 17-02-28 20:21:43.867 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.58985 17-02-28 20:21:43.867 -08 000000042 INF: Z-height at LaneTopSurface is -0.152872062663185. 17-02-28 20:21:43.867 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-02-28 20:21:44.005 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-02-28 20:21:44.005 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n 17-02-28 20:21:44.018 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:44.079 -08 000000030 INF: FPGA: Recv ZSTEP 17-02-28 20:21:44.079 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1=================== 17-02-28 20:21:44.080 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:44.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:44.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:44.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:44.082 -08 000000038 INF: ===================Move Tilt Motor 1=================== 17-02-28 20:21:44.082 -08 000000033 INF: ===================Move Tilt Motor 3=================== 17-02-28 20:21:44.083 -08 000000023 INF: ===================Move Tilt Motor 2=================== 17-02-28 20:21:44.083 -08 000000033 INF: Tilt Motor 3: Moving to 5.2105 mm, started at 5.2113 mm, delta = -0.0008 mm 17-02-28 20:21:44.083 -08 000000033 INF: FPGA: Xmit T3RD\n 17-02-28 20:21:44.083 -08 000000038 INF: ====================================== 17-02-28 20:21:44.083 -08 000000023 INF: ====================================== 17-02-28 20:21:44.142 -08 000000099 INF: FPGA: Recv T3RD 20517 17-02-28 20:21:44.142 -08 000000033 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6 17-02-28 20:21:44.142 -08 000000033 INF: Tilt Motor 3: Moving to 20514 encoder counts 17-02-28 20:21:44.142 -08 000000033 INF: FPGA: Xmit T3MOVETO 20514\n 17-02-28 20:21:44.265 -08 000000099 INF: FPGA: Recv T3MOVETO 0 17-02-28 20:21:44.265 -08 000000033 INF: Tilt Motor 3: To move from 5.211 to 5.210 (-0.001 mm) should take 0 steps, but required 0 steps (0.000 mm). Slippage = 0.000 mm (0.00%) 17-02-28 20:21:44.265 -08 000000033 INF: FPGA: Xmit T3RD\n 17-02-28 20:21:44.330 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:44.331 -08 000000023 INF: FPGA: Recv T3RD 20517 17-02-28 20:21:44.332 -08 000000033 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6 17-02-28 20:21:44.332 -08 000000033 INF: FPGA: Xmit T3RD\n 17-02-28 20:21:44.391 -08 000000066 INF: FPGA: Recv T3RD 20517 17-02-28 20:21:44.391 -08 000000033 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6 17-02-28 20:21:44.391 -08 000000033 INF: FPGA: Xmit T3RD\n 17-02-28 20:21:44.392 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:44.453 -08 000000046 INF: FPGA: Recv T3RD 20517 17-02-28 20:21:44.453 -08 000000033 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6 17-02-28 20:21:44.453 -08 000000033 INF: Tilt Motor 3: After move to 5.2105, error = 0.0008, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:21:44.453 -08 000000033 INF: Tilt Motor 3: Moved to 5.2113 after 370.2982 ms 17-02-28 20:21:44.453 -08 000000033 INF: ====================================== 17-02-28 20:21:44.454 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:44.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:44.456 -08 000000042 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.07675395464298, m2=5.2635772251359, m3=5.2104912251359 17-02-28 20:21:44.456 -08 000000042 INF: ETF Best Z: -0.1301721 mm (34123 DAC) 17-02-28 20:21:44.456 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:44.457 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:44.457 -08 000000042 INF: Compensator: Moving IntoPath 17-02-28 20:21:44.457 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n 17-02-28 20:21:44.922 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:44.985 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:45.235 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:45.297 -08 000000039 INF: FPGA: Recv MIOCOMPF 17-02-28 20:21:45.297 -08 000000042 INF: Compensator: Moved IntoPath in 840 ms 17-02-28 20:21:45.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:45.298 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:45.299 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:45.305 -08 000000042 INF: Swath 1 position calculated to be: {X=68.63164, Y=39.76308} from estimated center X= 69.147, Y= 39.77999 on surface LaneTopSurface 17-02-28 20:21:45.305 -08 000000042 INF: Swath 2 position calculated to be: {X=69.73964, Y=39.76308} from estimated center X= 69.147, Y= 39.77999 on surface LaneTopSurface 17-02-28 20:21:45.310 -08 000000042 INF: Swath 0: Converted transform from (-90.23992, 4.536524) pixels to (-0.03105, 0.001725) mm. 17-02-28 20:21:45.316 -08 000000042 INF: Swath 1: Converted transform from (-118.6965, 3.599287) pixels to (-0.041055, 0.00138) mm. 17-02-28 20:21:45.316 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308=================== 17-02-28 20:21:45.317 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308=================== 17-02-28 20:21:45.317 -08 000000042 INF: Transformed XStagePosition from 68.63164 mm to 68.6005875729024 mm. 17-02-28 20:21:45.329 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5548143554488 mm. 17-02-28 20:21:45.329 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3548143554488 mm. 17-02-28 20:21:45.329 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4455643554488 mm. 17-02-28 20:21:45.331 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:45.331 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-02-28 20:21:45.331 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:45.331 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = A_1 17-02-28 20:21:45.336 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:21:45.337 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:21:45.338 -08 000000108 INF: ===================MoveEmissionFilters=================== 17-02-28 20:21:45.338 -08 000000023 INF: ===================Move X,Y=================== 17-02-28 20:21:45.338 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:21:45.338 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:21:45.339 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-02-28 20:21:45.339 -08 000000104 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:21:45.339 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:21:45.339 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:21:45.339 -08 000000023 INF: ===================Move X,Y, Parallel=================== 17-02-28 20:21:45.339 -08 000000058 INF: Z Motor: Entering MoveAbsStepped 17-02-28 20:21:45.339 -08 000000058 INF: Z Motor: Moving to -0.1502 mm, started at -0.0100 mm 17-02-28 20:21:45.339 -08 000000058 INF: FPGA: Xmit ZTRG 0\n 17-02-28 20:21:45.339 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:21:45.339 -08 000000104 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:21:45.339 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:21:45.340 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:21:45.340 -08 000000075 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-02-28 20:21:45.340 -08 000000073 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-02-28 20:21:45.340 -08 000000046 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-02-28 20:21:45.340 -08 000000045 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-02-28 20:21:45.340 -08 000000052 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-02-28 20:21:45.341 -08 000000072 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-02-28 20:21:45.341 -08 000000105 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-02-28 20:21:45.341 -08 000000050 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-02-28 20:21:45.341 -08 000000073 INF: Emission Filter 12: Remaining IntoPath 17-02-28 20:21:45.341 -08 000000045 INF: ====================================== 17-02-28 20:21:45.341 -08 000000105 INF: ====================================== 17-02-28 20:21:45.341 -08 000000050 INF: ====================================== 17-02-28 20:21:45.341 -08 000000073 INF: ====================================== 17-02-28 20:21:45.341 -08 000000075 INF: ====================================== 17-02-28 20:21:45.342 -08 000000052 INF: ====================================== 17-02-28 20:21:45.342 -08 000000089 INF: ===================Move X Motor without settling=================== 17-02-28 20:21:45.342 -08 000000059 INF: ===================Move Y Motor without settling=================== 17-02-28 20:21:45.342 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:21:45.343 -08 000000089 INF: X Motor: Xmit PR VM\n 17-02-28 20:21:45.343 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:21:45.343 -08 000000059 INF: Y Motor: Moving to 64.5548 mm @25.000 mm/sec, started at 62.9704 mm 17-02-28 20:21:45.343 -08 000000059 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:21:45.343 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:21:45.343 -08 000000046 INF: ====================================== 17-02-28 20:21:45.344 -08 000000072 INF: ====================================== 17-02-28 20:21:45.344 -08 000000038 INF: ====================================== 17-02-28 20:21:45.344 -08 000000085 INF: ====================================== 17-02-28 20:21:45.345 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:21:45.345 -08 000000104 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:21:45.346 -08 000000095 INF: ====================================== 17-02-28 20:21:45.346 -08 000000104 INF: ====================================== 17-02-28 20:21:45.347 -08 000000108 INF: ====================================== 17-02-28 20:21:45.359 -08 000000109 INF: FPGA: Recv ZTRG 17-02-28 20:21:45.359 -08 000000058 INF: FPGA: Xmit ZYT 0 3\n 17-02-28 20:21:45.423 -08 000000059 INF: Y Motor: Recv ok\r 17-02-28 20:21:45.423 -08 000000059 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:21:45.423 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:21:45.423 -08 000000089 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-02-28 20:21:45.423 -08 000000089 INF: X Motor: Xmit PR VI\n 17-02-28 20:21:45.423 -08 000000095 INF: FPGA: Recv ZYT 17-02-28 20:21:45.424 -08 000000058 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-02-28 20:21:45.424 -08 000000058 INF: FPGA: Xmit ZMV 39366\n 17-02-28 20:21:45.483 -08 000000066 INF: FPGA: Recv @LOG Trigger Camera 17-02-28 20:21:45.483 -08 000000006 INF: FPGA: Trigger Camera 17-02-28 20:21:45.485 -08 000000089 INF: X Motor: Recv PR VI\r\n410\r\n> 17-02-28 20:21:45.485 -08 000000089 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-02-28 20:21:45.485 -08 000000059 INF: Y Motor: Recv ok\r 17-02-28 20:21:45.485 -08 000000089 INF: X Motor: Moving to 68.6006 mm @15.000 mm/sec, started at 69.1855 mm 17-02-28 20:21:45.485 -08 000000059 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:21:45.485 -08 000000089 INF: X Motor: Xmit MA 3932\n 17-02-28 20:21:45.547 -08 000000089 INF: X Motor: Recv MA 3932\r\n> 17-02-28 20:21:45.547 -08 000000059 INF: Y Motor: Recv v 0\r 17-02-28 20:21:45.547 -08 000000059 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:21:45.547 -08 000000089 INF: X Motor: WaitUntilStopped 60039 17-02-28 20:21:45.547 -08 000000059 INF: Y Motor: Set target position to 5955481 encoder counts 17-02-28 20:21:45.547 -08 000000059 INF: Y Motor: Xmit s r0xca 5955481\r 17-02-28 20:21:45.548 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:45.607 -08 000000033 INF: FPGA: Recv ZMV 17-02-28 20:21:45.607 -08 000000058 INF: Z Motor: MoveAndTrigger 'ZMV' command took 183.4313 ms 17-02-28 20:21:45.607 -08 000000058 INF: FPGA: Xmit ZDACR\n 17-02-28 20:21:45.608 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:45.609 -08 000000059 INF: Y Motor: Recv ok\r 17-02-28 20:21:45.609 -08 000000059 INF: Y Motor: Start the move command 17-02-28 20:21:45.609 -08 000000059 INF: Y Motor: Xmit t 1\r 17-02-28 20:21:45.669 -08 000000095 INF: FPGA: Recv ZDACR 39366 17-02-28 20:21:45.669 -08 000000058 INF: Z Motor: MoveAndTrigger took 329.8279 ms w/comms 17-02-28 20:21:45.669 -08 000000058 INF: Z Motor: After move to -0.1502, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:21:45.669 -08 000000058 INF: Z Motor: MoveAbsStepped took 330.0127 ms 17-02-28 20:21:45.669 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:21:45.671 -08 000000059 INF: Y Motor: Recv ok\r 17-02-28 20:21:45.671 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-02-28 20:21:45.671 -08 000000059 INF: Y Motor: WaitUntilStopped 60063 17-02-28 20:21:45.671 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:45.672 -08 000000072 INF: ===================Camera Arm TDI=================== 17-02-28 20:21:45.672 -08 000000066 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:45.672 -08 000000066 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:21:45.672 -08 000000072 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:21:45.673 -08 000000066 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:21:45.673 -08 000000072 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:21:45.674 -08 000000066 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:21:45.674 -08 000000066 INF: FPGA: Xmit ZSEL 3\n 17-02-28 20:21:45.733 -08 000000051 INF: FPGA: Recv ZSEL 17-02-28 20:21:45.733 -08 000000066 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:21:45.734 -08 000000066 INF: FPGA: Xmit TDIBB 1\n 17-02-28 20:21:45.795 -08 000000045 INF: FPGA: Recv TDIBB 17-02-28 20:21:45.795 -08 000000066 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:21:45.796 -08 000000066 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:21:45.797 -08 000000059 INF: Y Motor: Unshifted Position: 5880997 17-02-28 20:21:45.797 -08 000000066 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:21:45.798 -08 000000066 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-02-28 20:21:45.798 -08 000000066 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-02-28 20:21:45.799 -08 000000066 INF: FPGA: Xmit ZSTEP 1792263\n 17-02-28 20:21:45.847 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:45.857 -08 000000099 INF: FPGA: Recv ZSTEP 17-02-28 20:21:45.857 -08 000000066 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:21:45.858 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:45.859 -08 000000066 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-02-28 20:21:45.859 -08 000000066 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:21:45.861 -08 000000066 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-02-28 20:21:45.861 -08 000000066 INF: Z Motor: Entering ArmAbsStepped 17-02-28 20:21:45.861 -08 000000066 INF: Z Motor: Arming to move to -0.1102 mm 17-02-28 20:21:45.861 -08 000000066 INF: FPGA: Xmit ZYT 6435481 4\n 17-02-28 20:21:45.921 -08 000000047 INF: FPGA: Recv ZYT 17-02-28 20:21:45.921 -08 000000066 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6380997 enc / 63.810 mm / ) = 6435481 enc / 64.355 mm 17-02-28 20:21:45.921 -08 000000066 INF: FPGA: Xmit ZARM 28881\n 17-02-28 20:21:45.922 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:45.973 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:45.983 -08 000000095 INF: FPGA: Recv ZARM 17-02-28 20:21:45.983 -08 000000066 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8854 ms 17-02-28 20:21:45.983 -08 000000066 INF: Z Motor: ArmAbsStepped took 122.0185 ms 17-02-28 20:21:45.983 -08 000000066 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:21:45.984 -08 000000066 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:45.985 -08 000000089 INF: X Motor: Xmit PR ER\n 17-02-28 20:21:45.986 -08 000000066 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-02-28 20:21:45.986 -08 000000066 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:45.988 -08 000000066 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-02-28 20:21:45.988 -08 000000066 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:45.989 -08 000000066 INF: ====================================== 17-02-28 20:21:46.047 -08 000000089 INF: X Motor: Recv PR ER\r\n0\r\n> 17-02-28 20:21:46.047 -08 000000089 INF: X Motor: Moved to 68.5996 after 500 ms 17-02-28 20:21:46.047 -08 000000089 INF: ====================================== 17-02-28 20:21:46.109 -08 000000059 INF: Y Motor: Unshifted Position: 5955483 17-02-28 20:21:46.109 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:21:46.109 -08 000000059 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:21:46.171 -08 000000059 INF: Y Motor: Recv v 0\r 17-02-28 20:21:46.171 -08 000000059 INF: Y Motor: Moved to 64.5548 after 500 ms 17-02-28 20:21:46.171 -08 000000059 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:21:46.172 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:46.232 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:46.233 -08 000000059 INF: Y Motor: Recv v 4096\r 17-02-28 20:21:46.233 -08 000000059 INF: Y Motor: Status After move finished OK: 17-02-28 20:21:46.233 -08 000000059 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:21:46.296 -08 000000059 INF: Y Motor: Recv v 0\r 17-02-28 20:21:46.296 -08 000000059 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:21:46.296 -08 000000059 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:21:46.360 -08 000000059 INF: Y Motor: Recv v 402653184\r 17-02-28 20:21:46.360 -08 000000059 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-02-28 20:21:46.360 -08 000000059 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:21:46.360 -08 000000059 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:21:46.422 -08 000000059 INF: Y Motor: Recv v 0\r 17-02-28 20:21:46.422 -08 000000059 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:21:46.422 -08 000000059 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:21:46.422 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:21:46.483 -08 000000059 INF: Y Motor: Recv ok\r 17-02-28 20:21:46.483 -08 000000059 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:21:46.483 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:21:46.483 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:46.547 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:46.548 -08 000000059 INF: Y Motor: Recv ok\r 17-02-28 20:21:46.548 -08 000000059 INF: ====================================== 17-02-28 20:21:46.549 -08 000000023 INF: ===================Move X,Y=================== 17-02-28 20:21:46.550 -08 000000023 INF: ====================================== 17-02-28 20:21:46.632 -08 000000072 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:21:46.632 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:21:46.632 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:21:46.648 -08 000000072 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:21:46.650 -08 000000072 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:21:46.797 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:46.858 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:47.108 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:47.169 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:47.419 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:47.483 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:47.627 -08 000000072 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:21:47.628 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:21:47.628 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:21:47.643 -08 000000072 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:21:47.645 -08 000000072 INF: ===================Camera Arm TDI=================== 17-02-28 20:21:47.646 -08 000000072 INF: ====================================== 17-02-28 20:21:47.647 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:21:47.648 -08 000000058 INF: ====================================== 17-02-28 20:21:47.649 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:21:47.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:47.650 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-02-28 20:21:47.650 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-02-28 20:21:47.733 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:21:47.733 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-02-28 20:21:47.733 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:47.793 -08 000000051 INF: FPGA: Recv ZFREQCL 17-02-28 20:21:47.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-02-28 20:21:47.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:47.793 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:21:47.794 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:47.855 -08 000000046 INF: FPGA: Recv TDIYERD 6455482 17-02-28 20:21:47.855 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455482 counts (64.555 mm) 17-02-28 20:21:47.855 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:21:47.856 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:21:47.856 -08 000000089 INF: ===================TDI FPGA Arm=================== 17-02-28 20:21:47.857 -08 000000069 INF: ===================Set YMotor gains for scans=================== 17-02-28 20:21:47.857 -08 000000069 INF: ====================================== 17-02-28 20:21:47.857 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:21:47.858 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-02-28 20:21:47.858 -08 000000089 INF: FPGA: Xmit TDIYPOS 6344556\n 17-02-28 20:21:47.919 -08 000000104 INF: FPGA: Recv TDIYPOS 17-02-28 20:21:47.919 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:21:47.920 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-02-28 20:21:47.921 -08 000000089 INF: FPGA: Xmit TDIYARM3 139264 6435481 1 1\n 17-02-28 20:21:47.981 -08 000000099 INF: FPGA: Recv TDIYARM3 17-02-28 20:21:47.981 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:21:47.982 -08 000000089 INF: ===================TDI FPGA Arm=================== 17-02-28 20:21:47.983 -08 000000089 INF: ====================================== 17-02-28 20:21:47.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:21:47.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:47.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:47.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:47.986 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:47.987 -08 000000051 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-02-28 20:21:47.987 -08 000000086 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-02-28 20:21:47.987 -08 000000051 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-02-28 20:21:47.987 -08 000000051 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-02-28 20:21:47.987 -08 000000051 INF: Excitation Filter 2: Moving -107 steps 17-02-28 20:21:47.987 -08 000000086 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-02-28 20:21:47.987 -08 000000051 INF: FPGA: Xmit EX2MV -107\n 17-02-28 20:21:47.987 -08 000000086 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-02-28 20:21:47.987 -08 000000086 INF: Excitation Filter 1: Moving -107 steps 17-02-28 20:21:47.988 -08 000000086 INF: FPGA: Xmit EX1MV -107\n 17-02-28 20:21:48.044 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:48.107 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:48.357 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:48.418 -08 000000038 INF: FPGA: Recv EX2MV 17-02-28 20:21:48.418 -08 000000038 INF: FPGA: Recv EX1MV 17-02-28 20:21:48.418 -08 000000086 INF: Excitation Filter 1: Moved -107 steps in 430.8054 ms 17-02-28 20:21:48.418 -08 000000051 INF: Excitation Filter 2: Moved -107 steps in 430.9658 ms 17-02-28 20:21:48.418 -08 000000051 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 431.0631 ms 17-02-28 20:21:48.418 -08 000000051 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 431.1301 ms 17-02-28 20:21:48.418 -08 000000086 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 430.937 ms 17-02-28 20:21:48.418 -08 000000086 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 431.1102 ms 17-02-28 20:21:48.418 -08 000000051 INF: ====================================== 17-02-28 20:21:48.418 -08 000000086 INF: ====================================== 17-02-28 20:21:48.419 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:48.419 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:48.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:48.421 -08 000000047 INF: ===================Camera TDI=================== 17-02-28 20:21:48.421 -08 000000085 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:21:48.421 -08 000000066 INF: ===================FPGA Z Wait=================== 17-02-28 20:21:48.421 -08 000000030 INF: ===================Move Y Motor without settling=================== 17-02-28 20:21:48.421 -08 000000066 INF: FPGA: Xmit ZWAIT\n 17-02-28 20:21:48.422 -08 000000030 INF: Y Motor: Moving to 14.9065 mm @6.500 mm/sec, started at 64.5548 mm 17-02-28 20:21:48.422 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:21:48.422 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:21:48.422 -08 000000047 INF: ===================Camera TDI, Parallel=================== 17-02-28 20:21:48.422 -08 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-02-28 20:21:48.423 -08 000000085 INF: FPGA: Xmit TDIYWAIT\n 17-02-28 20:21:48.423 -08 000000072 INF: ===================Camera TDI=================== 17-02-28 20:21:48.423 -08 000000045 INF: ===================Camera TDI=================== 17-02-28 20:21:48.424 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:48.424 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:48.425 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:48.425 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:48.482 -08 000000030 INF: Y Motor: Recv ok\r 17-02-28 20:21:48.482 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:21:48.482 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:21:48.545 -08 000000030 INF: Y Motor: Recv ok\r 17-02-28 20:21:48.545 -08 000000030 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:21:48.574 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:48.574 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:48.575 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:48.575 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:48.607 -08 000000030 INF: Y Motor: Recv v 0\r 17-02-28 20:21:48.607 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:21:48.607 -08 000000030 INF: Y Motor: Set target position to 990648 encoder counts 17-02-28 20:21:48.607 -08 000000030 INF: Y Motor: Xmit s r0xca 990648\r 17-02-28 20:21:48.669 -08 000000030 INF: Y Motor: Recv ok\r 17-02-28 20:21:48.669 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:48.669 -08 000000030 INF: Y Motor: Start the move command 17-02-28 20:21:48.669 -08 000000030 INF: Y Motor: Xmit t 1\r 17-02-28 20:21:48.724 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:48.724 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:48.725 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:21:48.725 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:21:48.732 -08 000000030 INF: Y Motor: Recv ok\r 17-02-28 20:21:48.732 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:48.732 -08 000000030 INF: Y Motor: WaitUntilStopped 67638 17-02-28 20:21:48.732 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:48.793 -08 000000069 INF: FPGA: Recv ZWAIT 17-02-28 20:21:48.794 -08 000000066 INF: ====================================== 17-02-28 20:21:48.855 -08 000000030 INF: Y Motor: Unshifted Position: 5893193 17-02-28 20:21:48.874 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:21:48.874 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:21:48.874 -08 000000045 INF: ===================Camera #2 Frame #5=================== 17-02-28 20:21:48.875 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:21:48.875 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:21:48.875 -08 000000072 INF: ===================Camera #0 Frame #5=================== 17-02-28 20:21:48.905 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:48.982 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:49.031 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:49.041 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-02-28 20:21:49.041 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-02-28 20:21:49.041 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-02-28 20:21:49.041 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-02-28 20:21:49.041 -08 000000045 INF: ===================Camera #2 Frame #11=================== 17-02-28 20:21:49.041 -08 000000072 INF: ===================Camera #0 Frame #11=================== 17-02-28 20:21:49.042 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:21:49.042 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)=================== 17-02-28 20:21:49.042 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)=================== 17-02-28 20:21:49.043 -08 000000018 INF: WaitCommand(5000) start 17-02-28 20:21:49.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Delay 5 of 5 seconds left=================== 17-02-28 20:21:49.167 -08 000000030 INF: Y Motor: Unshifted Position: 5690397 17-02-28 20:21:49.211 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-02-28 20:21:49.211 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-02-28 20:21:49.211 -08 000000072 INF: ===================Camera #0 Frame #17=================== 17-02-28 20:21:49.212 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-02-28 20:21:49.212 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-02-28 20:21:49.212 -08 000000045 INF: ===================Camera #2 Frame #17=================== 17-02-28 20:21:49.217 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:49.341 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:49.381 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-02-28 20:21:49.381 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-02-28 20:21:49.381 -08 000000072 INF: ===================Camera #0 Frame #23=================== 17-02-28 20:21:49.383 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-02-28 20:21:49.383 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-02-28 20:21:49.383 -08 000000045 INF: ===================Camera #2 Frame #23=================== 17-02-28 20:21:49.480 -08 000000030 INF: Y Motor: Unshifted Position: 5487386 17-02-28 20:21:49.530 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:49.551 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-02-28 20:21:49.551 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-02-28 20:21:49.551 -08 000000072 INF: ===================Camera #0 Frame #29=================== 17-02-28 20:21:49.554 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30. 17-02-28 20:21:49.554 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30 17-02-28 20:21:49.554 -08 000000045 INF: ===================Camera #2 Frame #30=================== 17-02-28 20:21:49.654 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:49.721 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36. 17-02-28 20:21:49.721 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36 17-02-28 20:21:49.721 -08 000000072 INF: ===================Camera #0 Frame #36=================== 17-02-28 20:21:49.728 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36. 17-02-28 20:21:49.728 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36 17-02-28 20:21:49.728 -08 000000045 INF: ===================Camera #2 Frame #36=================== 17-02-28 20:21:49.793 -08 000000030 INF: Y Motor: Unshifted Position: 5285880 17-02-28 20:21:49.843 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:49.894 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-02-28 20:21:49.894 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-02-28 20:21:49.894 -08 000000072 INF: ===================Camera #0 Frame #42=================== 17-02-28 20:21:49.898 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-02-28 20:21:49.898 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-02-28 20:21:49.898 -08 000000045 INF: ===================Camera #2 Frame #42=================== 17-02-28 20:21:49.967 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:50.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)=================== 17-02-28 20:21:50.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Delay 4 of 5 seconds left=================== 17-02-28 20:21:50.064 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-02-28 20:21:50.064 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-02-28 20:21:50.064 -08 000000072 INF: ===================Camera #0 Frame #48=================== 17-02-28 20:21:50.069 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49. 17-02-28 20:21:50.069 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49 17-02-28 20:21:50.069 -08 000000045 INF: ===================Camera #2 Frame #49=================== 17-02-28 20:21:50.103 -08 000000030 INF: Y Motor: Unshifted Position: 5082210 17-02-28 20:21:50.153 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:50.234 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55. 17-02-28 20:21:50.234 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55 17-02-28 20:21:50.234 -08 000000072 INF: ===================Camera #0 Frame #55=================== 17-02-28 20:21:50.243 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55. 17-02-28 20:21:50.243 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55 17-02-28 20:21:50.243 -08 000000045 INF: ===================Camera #2 Frame #55=================== 17-02-28 20:21:50.278 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:50.405 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-02-28 20:21:50.405 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-02-28 20:21:50.405 -08 000000072 INF: ===================Camera #0 Frame #61=================== 17-02-28 20:21:50.412 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-02-28 20:21:50.412 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-02-28 20:21:50.412 -08 000000045 INF: ===================Camera #2 Frame #61=================== 17-02-28 20:21:50.414 -08 000000030 INF: Y Motor: Unshifted Position: 4879842 17-02-28 20:21:50.464 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:50.573 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-02-28 20:21:50.573 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-02-28 20:21:50.573 -08 000000072 INF: ===================Camera #0 Frame #67=================== 17-02-28 20:21:50.582 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-02-28 20:21:50.582 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-02-28 20:21:50.582 -08 000000045 INF: ===================Camera #2 Frame #67=================== 17-02-28 20:21:50.591 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:50.727 -08 000000030 INF: Y Motor: Unshifted Position: 4676396 17-02-28 20:21:50.741 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-02-28 20:21:50.741 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-02-28 20:21:50.741 -08 000000072 INF: ===================Camera #0 Frame #73=================== 17-02-28 20:21:50.752 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74. 17-02-28 20:21:50.752 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74 17-02-28 20:21:50.752 -08 000000045 INF: ===================Camera #2 Frame #74=================== 17-02-28 20:21:50.777 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:50.901 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:50.909 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79. 17-02-28 20:21:50.909 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79 17-02-28 20:21:50.909 -08 000000072 INF: ===================Camera #0 Frame #79=================== 17-02-28 20:21:50.926 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80. 17-02-28 20:21:50.926 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80 17-02-28 20:21:50.926 -08 000000045 INF: ===================Camera #2 Frame #80=================== 17-02-28 20:21:51.040 -08 000000030 INF: Y Motor: Unshifted Position: 4472718 17-02-28 20:21:51.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)=================== 17-02-28 20:21:51.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Delay 3 of 5 seconds left=================== 17-02-28 20:21:51.077 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-02-28 20:21:51.077 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-02-28 20:21:51.077 -08 000000072 INF: ===================Camera #0 Frame #86=================== 17-02-28 20:21:51.090 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:51.097 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-02-28 20:21:51.097 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-02-28 20:21:51.097 -08 000000045 INF: ===================Camera #2 Frame #86=================== 17-02-28 20:21:51.214 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:51.249 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-02-28 20:21:51.249 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-02-28 20:21:51.249 -08 000000072 INF: ===================Camera #0 Frame #92=================== 17-02-28 20:21:51.267 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93. 17-02-28 20:21:51.267 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93 17-02-28 20:21:51.267 -08 000000045 INF: ===================Camera #2 Frame #93=================== 17-02-28 20:21:51.352 -08 000000030 INF: Y Motor: Unshifted Position: 4269919 17-02-28 20:21:51.402 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:51.418 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98. 17-02-28 20:21:51.418 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98 17-02-28 20:21:51.418 -08 000000072 INF: ===================Camera #0 Frame #98=================== 17-02-28 20:21:51.441 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99. 17-02-28 20:21:51.441 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99 17-02-28 20:21:51.441 -08 000000045 INF: ===================Camera #2 Frame #99=================== 17-02-28 20:21:51.526 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:51.588 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104. 17-02-28 20:21:51.588 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104 17-02-28 20:21:51.588 -08 000000072 INF: ===================Camera #0 Frame #104=================== 17-02-28 20:21:51.613 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105. 17-02-28 20:21:51.613 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105 17-02-28 20:21:51.613 -08 000000045 INF: ===================Camera #2 Frame #105=================== 17-02-28 20:21:51.662 -08 000000030 INF: Y Motor: Unshifted Position: 4068414 17-02-28 20:21:51.712 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:51.758 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-02-28 20:21:51.758 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-02-28 20:21:51.758 -08 000000072 INF: ===================Camera #0 Frame #111=================== 17-02-28 20:21:51.784 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112. 17-02-28 20:21:51.784 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112 17-02-28 20:21:51.784 -08 000000045 INF: ===================Camera #2 Frame #112=================== 17-02-28 20:21:51.839 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:51.931 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-02-28 20:21:51.931 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-02-28 20:21:51.931 -08 000000072 INF: ===================Camera #0 Frame #117=================== 17-02-28 20:21:51.958 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118. 17-02-28 20:21:51.958 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118 17-02-28 20:21:51.958 -08 000000045 INF: ===================Camera #2 Frame #118=================== 17-02-28 20:21:51.976 -08 000000030 INF: Y Motor: Unshifted Position: 3864099 17-02-28 20:21:52.026 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:52.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)=================== 17-02-28 20:21:52.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Delay 2 of 5 seconds left=================== 17-02-28 20:21:52.101 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123. 17-02-28 20:21:52.101 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123 17-02-28 20:21:52.101 -08 000000072 INF: ===================Camera #0 Frame #123=================== 17-02-28 20:21:52.128 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124. 17-02-28 20:21:52.128 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124 17-02-28 20:21:52.128 -08 000000045 INF: ===================Camera #2 Frame #124=================== 17-02-28 20:21:52.150 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:52.270 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130. 17-02-28 20:21:52.270 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130 17-02-28 20:21:52.270 -08 000000072 INF: ===================Camera #0 Frame #130=================== 17-02-28 20:21:52.288 -08 000000030 INF: Y Motor: Unshifted Position: 3661080 17-02-28 20:21:52.299 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131. 17-02-28 20:21:52.299 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131 17-02-28 20:21:52.299 -08 000000045 INF: ===================Camera #2 Frame #131=================== 17-02-28 20:21:52.338 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:52.442 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-02-28 20:21:52.442 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-02-28 20:21:52.442 -08 000000072 INF: ===================Camera #0 Frame #136=================== 17-02-28 20:21:52.462 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:52.473 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137. 17-02-28 20:21:52.473 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137 17-02-28 20:21:52.473 -08 000000045 INF: ===================Camera #2 Frame #137=================== 17-02-28 20:21:52.598 -08 000000030 INF: Y Motor: Unshifted Position: 3459367 17-02-28 20:21:52.612 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142. 17-02-28 20:21:52.612 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142 17-02-28 20:21:52.612 -08 000000072 INF: ===================Camera #0 Frame #142=================== 17-02-28 20:21:52.644 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143. 17-02-28 20:21:52.644 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143 17-02-28 20:21:52.644 -08 000000045 INF: ===================Camera #2 Frame #143=================== 17-02-28 20:21:52.648 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:52.773 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:52.781 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148. 17-02-28 20:21:52.781 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148 17-02-28 20:21:52.781 -08 000000072 INF: ===================Camera #0 Frame #148=================== 17-02-28 20:21:52.815 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150. 17-02-28 20:21:52.815 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150 17-02-28 20:21:52.815 -08 000000045 INF: ===================Camera #2 Frame #150=================== 17-02-28 20:21:52.912 -08 000000030 INF: Y Motor: Unshifted Position: 3255267 17-02-28 20:21:52.951 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155. 17-02-28 20:21:52.951 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155 17-02-28 20:21:52.951 -08 000000072 INF: ===================Camera #0 Frame #155=================== 17-02-28 20:21:52.962 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:52.989 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156. 17-02-28 20:21:52.989 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156 17-02-28 20:21:52.989 -08 000000045 INF: ===================Camera #2 Frame #156=================== 17-02-28 20:21:53.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)=================== 17-02-28 20:21:53.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Delay 1 of 5 seconds left=================== 17-02-28 20:21:53.086 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:53.124 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161. 17-02-28 20:21:53.124 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161 17-02-28 20:21:53.124 -08 000000072 INF: ===================Camera #0 Frame #161=================== 17-02-28 20:21:53.160 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162. 17-02-28 20:21:53.160 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162 17-02-28 20:21:53.160 -08 000000045 INF: ===================Camera #2 Frame #162=================== 17-02-28 20:21:53.223 -08 000000030 INF: Y Motor: Unshifted Position: 3053555 17-02-28 20:21:53.273 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:53.294 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167. 17-02-28 20:21:53.294 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167 17-02-28 20:21:53.294 -08 000000072 INF: ===================Camera #0 Frame #167=================== 17-02-28 20:21:53.331 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169. 17-02-28 20:21:53.331 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169 17-02-28 20:21:53.331 -08 000000045 INF: ===================Camera #2 Frame #169=================== 17-02-28 20:21:53.397 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:53.464 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174. 17-02-28 20:21:53.464 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174 17-02-28 20:21:53.464 -08 000000072 INF: ===================Camera #0 Frame #174=================== 17-02-28 20:21:53.505 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175. 17-02-28 20:21:53.505 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175 17-02-28 20:21:53.505 -08 000000045 INF: ===================Camera #2 Frame #175=================== 17-02-28 20:21:53.536 -08 000000030 INF: Y Motor: Unshifted Position: 2849460 17-02-28 20:21:53.586 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:53.637 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180. 17-02-28 20:21:53.637 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180 17-02-28 20:21:53.637 -08 000000072 INF: ===================Camera #0 Frame #180=================== 17-02-28 20:21:53.676 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181. 17-02-28 20:21:53.676 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181 17-02-28 20:21:53.676 -08 000000045 INF: ===================Camera #2 Frame #181=================== 17-02-28 20:21:53.711 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:53.807 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186. 17-02-28 20:21:53.807 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186 17-02-28 20:21:53.807 -08 000000072 INF: ===================Camera #0 Frame #186=================== 17-02-28 20:21:53.846 -08 000000030 INF: Y Motor: Unshifted Position: 2647962 17-02-28 20:21:53.847 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188. 17-02-28 20:21:53.847 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188 17-02-28 20:21:53.847 -08 000000045 INF: ===================Camera #2 Frame #188=================== 17-02-28 20:21:53.896 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:53.977 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192. 17-02-28 20:21:53.977 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192 17-02-28 20:21:53.977 -08 000000072 INF: ===================Camera #0 Frame #192=================== 17-02-28 20:21:54.021 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:54.021 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194. 17-02-28 20:21:54.021 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194 17-02-28 20:21:54.021 -08 000000045 INF: ===================Camera #2 Frame #194=================== 17-02-28 20:21:54.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)=================== 17-02-28 20:21:54.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)=================== 17-02-28 20:21:54.043 -08 000000018 INF: WaitCommand(5000) end 17-02-28 20:21:54.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)=================== 17-02-28 20:21:54.142 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:21:54.147 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199. 17-02-28 20:21:54.147 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199 17-02-28 20:21:54.147 -08 000000072 INF: ===================Camera #0 Frame #199=================== 17-02-28 20:21:54.160 -08 000000030 INF: Y Motor: Unshifted Position: 2443646 17-02-28 20:21:54.192 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200. 17-02-28 20:21:54.192 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200 17-02-28 20:21:54.192 -08 000000045 INF: ===================Camera #2 Frame #200=================== 17-02-28 20:21:54.210 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:54.221 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF) 17-02-28 20:21:54.221 -08 000000018 INF: Current Position of Pump is: 18240 17-02-28 20:21:54.319 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205. 17-02-28 20:21:54.319 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205 17-02-28 20:21:54.319 -08 000000072 INF: ===================Camera #0 Frame #205=================== 17-02-28 20:21:54.321 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:21:54.335 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:54.363 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207. 17-02-28 20:21:54.363 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207 17-02-28 20:21:54.363 -08 000000045 INF: ===================Camera #2 Frame #207=================== 17-02-28 20:21:54.408 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF) 17-02-28 20:21:54.408 -08 000000018 INF: Current Position of Pump is: 18240 17-02-28 20:21:54.408 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Dispensing port PortC=================== 17-02-28 20:21:54.471 -08 000000030 INF: Y Motor: Unshifted Position: 2240849 17-02-28 20:21:54.489 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211. 17-02-28 20:21:54.489 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211 17-02-28 20:21:54.489 -08 000000072 INF: ===================Camera #0 Frame #211=================== 17-02-28 20:21:54.508 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD18240R\r 17-02-28 20:21:54.521 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:54.537 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213. 17-02-28 20:21:54.537 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213 17-02-28 20:21:54.537 -08 000000045 INF: ===================Camera #2 Frame #213=================== 17-02-28 20:21:54.594 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:54.645 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:54.659 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218. 17-02-28 20:21:54.659 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218 17-02-28 20:21:54.659 -08 000000072 INF: ===================Camera #0 Frame #218=================== 17-02-28 20:21:54.694 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:54.707 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219. 17-02-28 20:21:54.707 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219 17-02-28 20:21:54.707 -08 000000045 INF: ===================Camera #2 Frame #219=================== 17-02-28 20:21:54.783 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:54.784 -08 000000030 INF: Y Motor: Unshifted Position: 2038049 17-02-28 20:21:54.832 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224. 17-02-28 20:21:54.832 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224 17-02-28 20:21:54.832 -08 000000072 INF: ===================Camera #0 Frame #224=================== 17-02-28 20:21:54.834 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:54.878 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226. 17-02-28 20:21:54.878 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226 17-02-28 20:21:54.878 -08 000000045 INF: ===================Camera #2 Frame #226=================== 17-02-28 20:21:54.958 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:55.002 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230. 17-02-28 20:21:55.002 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230 17-02-28 20:21:55.002 -08 000000072 INF: ===================Camera #0 Frame #230=================== 17-02-28 20:21:55.033 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:55.052 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232. 17-02-28 20:21:55.052 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232 17-02-28 20:21:55.052 -08 000000045 INF: ===================Camera #2 Frame #232=================== 17-02-28 20:21:55.093 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:55.094 -08 000000030 INF: Y Motor: Unshifted Position: 1836334 17-02-28 20:21:55.144 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:55.172 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236. 17-02-28 20:21:55.172 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236 17-02-28 20:21:55.172 -08 000000072 INF: ===================Camera #0 Frame #236=================== 17-02-28 20:21:55.222 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238. 17-02-28 20:21:55.222 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238 17-02-28 20:21:55.222 -08 000000045 INF: ===================Camera #2 Frame #238=================== 17-02-28 20:21:55.269 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:55.340 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243. 17-02-28 20:21:55.340 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243 17-02-28 20:21:55.340 -08 000000072 INF: ===================Camera #0 Frame #243=================== 17-02-28 20:21:55.343 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:55.393 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245. 17-02-28 20:21:55.393 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245 17-02-28 20:21:55.393 -08 000000045 INF: ===================Camera #2 Frame #245=================== 17-02-28 20:21:55.407 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:55.408 -08 000000030 INF: Y Motor: Unshifted Position: 1632008 17-02-28 20:21:55.458 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:55.513 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249. 17-02-28 20:21:55.513 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249 17-02-28 20:21:55.513 -08 000000072 INF: ===================Camera #0 Frame #249=================== 17-02-28 20:21:55.567 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251. 17-02-28 20:21:55.567 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251 17-02-28 20:21:55.567 -08 000000045 INF: ===================Camera #2 Frame #251=================== 17-02-28 20:21:55.582 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:55.657 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:55.682 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255. 17-02-28 20:21:55.682 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255 17-02-28 20:21:55.682 -08 000000072 INF: ===================Camera #0 Frame #255=================== 17-02-28 20:21:55.717 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:55.718 -08 000000030 INF: Y Motor: Unshifted Position: 1430509 17-02-28 20:21:55.738 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257. 17-02-28 20:21:55.738 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257 17-02-28 20:21:55.738 -08 000000045 INF: ===================Camera #2 Frame #257=================== 17-02-28 20:21:55.768 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:55.852 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261. 17-02-28 20:21:55.852 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261 17-02-28 20:21:55.852 -08 000000072 INF: ===================Camera #0 Frame #261=================== 17-02-28 20:21:55.893 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:55.909 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264. 17-02-28 20:21:55.909 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264 17-02-28 20:21:55.909 -08 000000045 INF: ===================Camera #2 Frame #264=================== 17-02-28 20:21:55.967 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:56.022 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268. 17-02-28 20:21:56.022 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268 17-02-28 20:21:56.022 -08 000000072 INF: ===================Camera #0 Frame #268=================== 17-02-28 20:21:56.031 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:56.032 -08 000000030 INF: Y Motor: Unshifted Position: 1226179 17-02-28 20:21:56.082 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:56.083 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270. 17-02-28 20:21:56.083 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270 17-02-28 20:21:56.083 -08 000000045 INF: ===================Camera #2 Frame #270=================== 17-02-28 20:21:56.154 -08 000000105 INF: FPGA: Recv TDIYWAIT 17-02-28 20:21:56.154 -08 000000085 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:21:56.156 -08 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-02-28 20:21:56.157 -08 000000038 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-02-28 20:21:56.157 -08 000000066 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-02-28 20:21:56.157 -08 000000038 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-02-28 20:21:56.157 -08 000000038 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-02-28 20:21:56.157 -08 000000038 INF: Excitation Filter 1: Moving 107 steps 17-02-28 20:21:56.157 -08 000000066 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-02-28 20:21:56.157 -08 000000066 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-02-28 20:21:56.157 -08 000000066 INF: Excitation Filter 2: Moving 107 steps 17-02-28 20:21:56.157 -08 000000038 INF: FPGA: Xmit EX1MV 107\n 17-02-28 20:21:56.158 -08 000000066 INF: FPGA: Xmit EX2MV 107\n 17-02-28 20:21:56.194 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:21:56.194 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:21:56.194 -08 000000072 INF: ===================Camera #0 Frame #272=================== 17-02-28 20:21:56.206 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:56.206 -08 000000072 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:21:56.207 -08 000000072 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:21:56.282 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:56.342 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:56.343 -08 000000030 INF: Y Motor: Unshifted Position: 1024684 17-02-28 20:21:56.370 -08 000000072 INF: Camera #0 ReleaseBuffer 17-02-28 20:21:56.370 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:21:56.370 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:21:56.370 -08 000000045 INF: ===================Camera #2 Frame #272=================== 17-02-28 20:21:56.370 -08 000000072 INF: ===================Camera TDI=================== 17-02-28 20:21:56.377 -08 000000045 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:21:56.378 -08 000000045 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:21:56.393 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:56.407 -08 000000072 INF: ====================================== 17-02-28 20:21:56.528 -08 000000051 INF: FPGA: Recv EX1MV 17-02-28 20:21:56.528 -08 000000051 INF: FPGA: Recv EX2MV 17-02-28 20:21:56.528 -08 000000066 INF: Excitation Filter 2: Moved 107 steps in 370.0237 ms 17-02-28 20:21:56.528 -08 000000066 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.1226 ms 17-02-28 20:21:56.528 -08 000000066 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.1963 ms 17-02-28 20:21:56.528 -08 000000038 INF: Excitation Filter 1: Moved 107 steps in 370.1932 ms 17-02-28 20:21:56.528 -08 000000038 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.4027 ms 17-02-28 20:21:56.528 -08 000000038 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.4742 ms 17-02-28 20:21:56.528 -08 000000066 INF: ====================================== 17-02-28 20:21:56.529 -08 000000038 INF: ====================================== 17-02-28 20:21:56.530 -08 000000030 INF: Y Motor: Unshifted Position: 990649 17-02-28 20:21:56.530 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:21:56.530 -08 000000030 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:21:56.530 -08 000000085 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:21:56.531 -08 000000085 INF: ====================================== 17-02-28 20:21:56.578 -08 000000045 INF: Camera #2 ReleaseBuffer 17-02-28 20:21:56.578 -08 000000045 INF: ===================Camera TDI=================== 17-02-28 20:21:56.592 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:56.595 -08 000000030 INF: Y Motor: Recv v 0\r 17-02-28 20:21:56.595 -08 000000030 INF: Y Motor: Moved to 14.9065 after 7862 ms 17-02-28 20:21:56.595 -08 000000030 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:21:56.613 -08 000000045 INF: ====================================== 17-02-28 20:21:56.615 -08 000000047 INF: ===================Camera TDI=================== 17-02-28 20:21:56.616 -08 000000047 INF: ====================================== 17-02-28 20:21:56.656 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:56.657 -08 000000030 INF: Y Motor: Recv v 4097\r 17-02-28 20:21:56.657 -08 000000030 INF: Y Motor: Status After move finished OK: 17-02-28 20:21:56.657 -08 000000030 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:21:56.672 -08 000000108 INF: RunCopyService queue size at 2/28/2017 8:21:56 PM is 2 17-02-28 20:21:56.718 -08 000000030 INF: Y Motor: Recv v 0\r 17-02-28 20:21:56.718 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:21:56.718 -08 000000030 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:21:56.780 -08 000000030 INF: Y Motor: Recv v 134217728\r 17-02-28 20:21:56.780 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-02-28 20:21:56.780 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:21:56.780 -08 000000030 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:21:56.842 -08 000000030 INF: Y Motor: Recv v 0\r 17-02-28 20:21:56.842 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:21:56.842 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:21:56.842 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:21:56.906 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:56.907 -08 000000030 INF: Y Motor: Recv ok\r 17-02-28 20:21:56.907 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:21:56.907 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:21:56.968 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:56.969 -08 000000030 INF: Y Motor: Recv ok\r 17-02-28 20:21:56.969 -08 000000030 INF: ====================================== 17-02-28 20:21:56.970 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:56.971 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:21:56.972 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:56.972 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-02-28 20:21:57.029 -08 000000090 INF: FPGA: Recv TDICLINES 1023 17-02-28 20:21:57.029 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:21:57.091 -08 000000073 INF: FPGA: Recv TDIYERD 1490649 17-02-28 20:21:57.091 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-02-28 20:21:57.153 -08 000000035 INF: FPGA: Recv ZADCR 31486 17-02-28 20:21:57.153 -08 000000042 INF: At scan end Y pos = 14.906 and Z pos = -0.121. Y moved -48.539 mm 17-02-28 20:21:57.153 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-02-28 20:21:57.215 -08 000000086 INF: FPGA: Recv TDIPULSES 139265 17-02-28 20:21:57.215 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-02-28 20:21:57.215 -08 000000042 INF: TDIScan finished after 11896.3929 ms 17-02-28 20:21:57.215 -08 000000042 INF: Image[0]: Y should trigger at 63.446 mm, 2nd row was at 64.354 mm (error = 0.909 mm) 17-02-28 20:21:57.215 -08 000000042 INF: Image[2]: Y should trigger at 63.446 mm, 2nd row was at 64.354 mm (error = 0.909 mm) 17-02-28 20:21:57.217 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:57.218 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:57.250 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.992 um 17-02-28 20:21:57.251 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:57.251 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-02-28 20:21:57.278 -08 000000036 INF: FPGA: Recv SWOOF_RDSTAT 0 17-02-28 20:21:57.278 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:57.279 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:21:57.279 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)=================== 17-02-28 20:21:57.279 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-02-28 20:21:57.279 -08 000000010 INF: ===================Dither Clean Up Command=================== 17-02-28 20:21:57.279 -08 000000109 INF: ===================Set YMotor gains for fast moves=================== 17-02-28 20:21:57.279 -08 000000082 INF: ===================Set Y Motor Motor Velocity=================== 17-02-28 20:21:57.279 -08 000000086 INF: ===================Set Z Motor Motor Velocity=================== 17-02-28 20:21:57.280 -08 000000086 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-02-28 20:21:57.280 -08 000000109 INF: ====================================== 17-02-28 20:21:57.280 -08 000000086 INF: FPGA: Xmit ZSTEP 1288471\n 17-02-28 20:21:57.280 -08 000000082 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:21:57.280 -08 000000082 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:21:57.280 -08 000000051 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:21:57.280 -08 000000077 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:21:57.281 -08 000000051 INF: FPGA: Xmit ZSEL 0\n 17-02-28 20:21:57.283 -08 000000077 INF: ===================LFT:Extracting coords=================== 17-02-28 20:21:57.309 -08 000000077 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:21:57.309 -08 000000077 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-02-28 20:21:57.310 -08 000000075 INF: ===================LookupFocusTracking=================== 17-02-28 20:21:57.310 -08 000000052 INF: ===================LookupFocusTracking=================== 17-02-28 20:21:57.310 -08 000000078 INF: ===================LookupFocusTracking=================== 17-02-28 20:21:57.311 -08 000000075 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:21:57.311 -08 000000052 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:21:57.311 -08 000000039 INF: ===================LookupFocusTracking=================== 17-02-28 20:21:57.311 -08 000000078 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:21:57.311 -08 000000039 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:21:57.342 -08 000000082 INF: Y Motor: Recv ok\r 17-02-28 20:21:57.342 -08 000000082 INF: ====================================== 17-02-28 20:21:57.342 -08 000000037 INF: FPGA: Recv ZSTEP 17-02-28 20:21:57.342 -08 000000037 INF: FPGA: Recv ZSEL 17-02-28 20:21:57.343 -08 000000051 INF: FPGA: Xmit ZDACW 39366\n 17-02-28 20:21:57.343 -08 000000086 INF: ====================================== 17-02-28 20:21:57.385 -08 000000052 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:21:57.385 -08 000000075 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:21:57.385 -08 000000039 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:21:57.391 -08 000000078 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:21:57.402 -08 000000105 INF: FPGA: Recv ZDACW 17-02-28 20:21:57.403 -08 000000051 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-02-28 20:21:57.403 -08 000000051 INF: FPGA: Xmit TDIBB 0\n 17-02-28 20:21:57.464 -08 000000109 INF: FPGA: Recv TDIBB 17-02-28 20:21:57.464 -08 000000051 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:21:57.465 -08 000000051 INF: ====================================== 17-02-28 20:21:57.536 -08 000000052 INF: LFT found best fwhm score 2.000015 in 151 ms 17-02-28 20:21:57.536 -08 000000052 INF: LFT found good score at index 8937 with fwhm value 2.000015. Next cycle, cycle 4 starting Z position for top surface is at -0.150 mm FC:B, C:3,L:1,T 17-02-28 20:21:57.536 -08 000000075 INF: LFT found best fwhm score 2.000154 in 151 ms 17-02-28 20:21:57.536 -08 000000052 INF: ===================LookupFocusTracking=================== 17-02-28 20:21:57.537 -08 000000075 INF: LFT found good score at index 5613 with fwhm value 2.000154. Next cycle, cycle 4 starting Z position for top surface is at -0.150 mm FC:B, C:3,L:1,T 17-02-28 20:21:57.537 -08 000000039 INF: LFT found best fwhm score 2.143586 in 152 ms 17-02-28 20:21:57.537 -08 000000039 INF: LFT found good score at index 2313 with fwhm value 2.143586. Next cycle, cycle 4 starting Z position for top surface is at -0.151 mm FC:B, C:3,L:1,T 17-02-28 20:21:57.537 -08 000000052 INF: ====================================== 17-02-28 20:21:57.537 -08 000000039 INF: ===================LookupFocusTracking=================== 17-02-28 20:21:57.537 -08 000000075 INF: ===================LookupFocusTracking=================== 17-02-28 20:21:57.537 -08 000000039 INF: ====================================== 17-02-28 20:21:57.537 -08 000000075 INF: ====================================== 17-02-28 20:21:57.555 -08 000000078 INF: LFT found best fwhm score 2.000296 in 164 ms 17-02-28 20:21:57.555 -08 000000078 INF: LFT found good score at index 7909 with fwhm value 2.000296. Next cycle, cycle 4 starting Z position for top surface is at -0.150 mm FC:B, C:3,L:1,T 17-02-28 20:21:57.555 -08 000000078 INF: ===================LookupFocusTracking=================== 17-02-28 20:21:57.555 -08 000000078 INF: ====================================== 17-02-28 20:21:57.557 -08 000000077 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:21:57.558 -08 000000077 INF: LFT weighted average best Z for top surface is at -0.150mm FC:B, C:3,L:1,T 17-02-28 20:21:57.558 -08 000000077 INF: ====================================== 17-02-28 20:21:57.559 -08 000000010 INF: ====================================== 17-02-28 20:21:57.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:57.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-02-28 20:21:57.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:57.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-02-28 20:21:57.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:57.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-02-28 20:21:57.562 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:57.562 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-02-28 20:21:57.562 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:57.562 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308=================== 17-02-28 20:21:57.562 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308=================== 17-02-28 20:21:57.563 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Waiting for image analysis=================== 17-02-28 20:21:57.563 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)=================== 17-02-28 20:21:57.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Waiting for image analysis=================== 17-02-28 20:21:57.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308=================== 17-02-28 20:21:57.586 -08 000000042 INF: Waited 23 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 0, buffer wait time 0 17-02-28 20:21:57.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:21:57.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308=================== 17-02-28 20:21:57.587 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:21:57.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308=================== 17-02-28 20:21:57.587 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-02-28 20:21:57.587 -08 000000042 INF: Transformed XStagePosition from 69.73964 mm to 69.6985842809081 mm. 17-02-28 20:21:57.599 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5544693554994 mm. 17-02-28 20:21:57.599 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3544693554994 mm. 17-02-28 20:21:57.599 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4452193554994 mm. 17-02-28 20:21:57.602 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:57.602 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-02-28 20:21:57.602 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:21:57.602 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -150.2 um, section = A_1 17-02-28 20:21:57.653 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":1,"Tile":1106,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF267","HCSMMF206","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:21:57.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:21:57.738 -08 000000035 INF: ===================Move X,Y=================== 17-02-28 20:21:57.738 -08 000000073 INF: ===================MoveEmissionFilters=================== 17-02-28 20:21:57.738 -08 000000035 INF: ===================Move X,Y, Parallel=================== 17-02-28 20:21:57.741 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:21:57.741 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-02-28 20:21:57.742 -08 000000052 INF: Z Motor: Entering MoveAbsStepped 17-02-28 20:21:57.742 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:21:57.743 -08 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:21:57.743 -08 000000058 INF: ===================Move X Motor without settling=================== 17-02-28 20:21:57.743 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-02-28 20:21:57.743 -08 000000058 INF: X Motor: Xmit PR VM\n 17-02-28 20:21:57.744 -08 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:21:57.749 -08 000000039 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:21:57.750 -08 000000039 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:21:57.751 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":1,"Tile":1101,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF178","HCSMMF183","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.752 -08 000000051 INF: ===================Move Y Motor without settling=================== 17-02-28 20:21:57.752 -08 000000051 INF: Y Motor: Moving to 64.5545 mm @25.000 mm/sec, started at 14.9065 mm 17-02-28 20:21:57.752 -08 000000051 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:21:57.752 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:21:57.756 -08 000000075 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:57.756 -08 000000075 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:21:57.756 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":1,"Tile":1102,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF278","HCSMMF184","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.757 -08 000000075 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:21:57.757 -08 000000087 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-02-28 20:21:57.757 -08 000000075 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:21:57.758 -08 000000075 INF: FPGA: Xmit ZSEL 3\n 17-02-28 20:21:57.758 -08 000000087 INF: ====================================== 17-02-28 20:21:57.761 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:21:57.762 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:21:57.766 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":1,"Tile":1104,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF189","HCSMMF272","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.767 -08 000000082 INF: ===================Camera Arm TDI=================== 17-02-28 20:21:57.767 -08 000000045 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-02-28 20:21:57.768 -08 000000082 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:21:57.768 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":1,"Tile":1107,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF234","HCSMMF185","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.768 -08 000000045 INF: ====================================== 17-02-28 20:21:57.768 -08 000000082 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:21:57.768 -08 000000105 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-02-28 20:21:57.769 -08 000000105 INF: Emission Filter 12: Remaining IntoPath 17-02-28 20:21:57.769 -08 000000105 INF: ====================================== 17-02-28 20:21:57.770 -08 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:21:57.770 -08 000000105 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:21:57.771 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":1,"Tile":1110,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF268","HCSMMF204","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.771 -08 000000105 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:21:57.771 -08 000000090 INF: ====================================== 17-02-28 20:21:57.772 -08 000000066 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-02-28 20:21:57.772 -08 000000045 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-02-28 20:21:57.772 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":1,"Tile":1105,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF222","HCSMMF254","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.772 -08 000000066 INF: ====================================== 17-02-28 20:21:57.773 -08 000000090 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-02-28 20:21:57.773 -08 000000045 INF: ====================================== 17-02-28 20:21:57.773 -08 000000099 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-02-28 20:21:57.773 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":1,"Tile":1108,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF242","HCSMMF223","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.773 -08 000000090 INF: ====================================== 17-02-28 20:21:57.774 -08 000000099 INF: ====================================== 17-02-28 20:21:57.774 -08 000000047 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-02-28 20:21:57.774 -08 000000039 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:21:57.774 -08 000000047 INF: ====================================== 17-02-28 20:21:57.774 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":1,"Tile":1103,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF213","HCSMMF241","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.775 -08 000000105 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:21:57.776 -08 000000039 INF: ====================================== 17-02-28 20:21:57.776 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:21:57.777 -08 000000036 INF: FPGA: Recv ZSEL 17-02-28 20:21:57.777 -08 000000087 INF: ====================================== 17-02-28 20:21:57.778 -08 000000075 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:21:57.778 -08 000000075 INF: FPGA: Xmit TDIBB 1\n 17-02-28 20:21:57.778 -08 000000105 INF: ====================================== 17-02-28 20:21:57.779 -08 000000051 INF: Y Motor: Recv ok\r 17-02-28 20:21:57.779 -08 000000051 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:21:57.779 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:21:57.779 -08 000000058 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-02-28 20:21:57.779 -08 000000058 INF: X Motor: Xmit PR VI\n 17-02-28 20:21:57.781 -08 000000073 INF: ====================================== 17-02-28 20:21:57.781 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":1,"Tile":1113,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF227","HCSMMF195","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.787 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":1,"Tile":1115,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF269","HCSMMF216","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.788 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":1,"Tile":1111,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF277","HCSMMF215","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.789 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":1,"Tile":1116,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF224","HCSMMF245","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.790 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":1,"Tile":1117,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF265","HCSMMF285","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.791 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":1,"Tile":1112,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF250","HCSMMF201","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.792 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":1,"Tile":1109,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF198","HCSMMF221","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.793 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":1,"Tile":1114,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF176","HCSMMF263","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.794 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":1,"Tile":1120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF243","HCSMMF218","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.795 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":1,"Tile":1118,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF203","HCSMMF190","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.796 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":1,"Tile":1122,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF187","HCSMMF257","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.797 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":1,"Tile":1119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF182","HCSMMF230","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.798 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":1,"Tile":1123,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF229","HCSMMF217","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.799 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":1,"Tile":1124,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF238","HCSMMF253","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.800 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":1,"Tile":1121,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF262","HCSMMF220","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.800 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":1,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF232","HCSMMF264","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.801 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":1,"Tile":1127,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF219","HCSMMF180","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.802 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":1,"Tile":1125,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF237","HCSMMF252","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.809 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":1,"Tile":1126,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF271","HCSMMF236","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:21:57.828 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:21:57.839 -08 000000030 INF: FPGA: Recv TDIBB 17-02-28 20:21:57.839 -08 000000075 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:21:57.840 -08 000000075 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:21:57.841 -08 000000058 INF: X Motor: Recv PR VI\r\n410\r\n> 17-02-28 20:21:57.841 -08 000000058 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-02-28 20:21:57.841 -08 000000051 INF: Y Motor: Recv ok\r 17-02-28 20:21:57.841 -08 000000051 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:21:57.841 -08 000000058 INF: X Motor: Moving to 69.6986 mm @15.000 mm/sec, started at 68.5996 mm 17-02-28 20:21:57.841 -08 000000075 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:21:57.841 -08 000000058 INF: X Motor: Xmit MA 4382\n 17-02-28 20:21:57.842 -08 000000075 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-02-28 20:21:57.842 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-02-28 20:21:57.843 -08 000000075 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-02-28 20:21:57.843 -08 000000075 INF: FPGA: Xmit ZSTEP 1792263\n 17-02-28 20:21:57.901 -08 000000059 INF: FPGA: Recv ZSTEP 17-02-28 20:21:57.901 -08 000000075 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:21:57.903 -08 000000051 INF: Y Motor: Recv v 0\r 17-02-28 20:21:57.903 -08 000000051 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:21:57.903 -08 000000051 INF: Y Motor: Set target position to 5955447 encoder counts 17-02-28 20:21:57.903 -08 000000051 INF: Y Motor: Xmit s r0xca 5955447\r 17-02-28 20:21:57.903 -08 000000075 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-02-28 20:21:57.903 -08 000000075 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:21:57.904 -08 000000058 INF: X Motor: Recv MA 4382\r\n> 17-02-28 20:21:57.904 -08 000000058 INF: X Motor: WaitUntilStopped 60073 17-02-28 20:21:57.905 -08 000000075 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-02-28 20:21:57.905 -08 000000075 INF: Z Motor: Entering ArmAbsStepped 17-02-28 20:21:57.905 -08 000000075 INF: Z Motor: Arming to move to -0.1102 mm 17-02-28 20:21:57.905 -08 000000075 INF: FPGA: Xmit ZYT 6435447 4\n 17-02-28 20:21:57.942 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:21:57.942 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-02-28 20:21:57.967 -08 000000036 INF: FPGA: Recv ZYT 17-02-28 20:21:57.967 -08 000000075 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490649 enc / 14.906 mm / ) = 6435447 enc / 64.354 mm 17-02-28 20:21:57.967 -08 000000075 INF: FPGA: Xmit ZARM 28881\n 17-02-28 20:21:57.969 -08 000000051 INF: Y Motor: Recv ok\r 17-02-28 20:21:57.969 -08 000000051 INF: Y Motor: Start the move command 17-02-28 20:21:57.969 -08 000000051 INF: Y Motor: Xmit t 1\r 17-02-28 20:21:57.978 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:21:57.984 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-02-28 20:21:58.026 -08 000000085 INF: FPGA: Recv ZARM 17-02-28 20:21:58.026 -08 000000075 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 58.8729 ms 17-02-28 20:21:58.026 -08 000000075 INF: Z Motor: ArmAbsStepped took 120.5754 ms 17-02-28 20:21:58.026 -08 000000075 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:21:58.028 -08 000000075 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:58.029 -08 000000051 INF: Y Motor: Recv ok\r 17-02-28 20:21:58.029 -08 000000051 INF: Y Motor: WaitUntilStopped 61986 17-02-28 20:21:58.029 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:58.029 -08 000000075 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-02-28 20:21:58.029 -08 000000075 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:58.031 -08 000000075 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-02-28 20:21:58.031 -08 000000075 INF: ===================TDI Scan Setup=================== 17-02-28 20:21:58.032 -08 000000075 INF: ====================================== 17-02-28 20:21:58.086 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:21:58.092 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-02-28 20:21:58.155 -08 000000051 INF: Y Motor: Unshifted Position: 1067931 17-02-28 20:21:58.179 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:21:58.185 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-02-28 20:21:58.205 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:58.278 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:21:58.329 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:58.363 -08 000000082 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:21:58.363 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:21:58.363 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:21:58.378 -08 000000082 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:21:58.379 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 17-02-28 20:21:58.380 -08 000000082 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:21:58.466 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:58.466 -08 000000051 INF: Y Motor: Unshifted Position: 1774810 17-02-28 20:21:58.516 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:58.528 -08 000000058 INF: X Motor: Xmit PR ER\n 17-02-28 20:21:58.562 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-02-28 20:21:58.566 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:58.590 -08 000000058 INF: X Motor: Recv PR ER\r\n0\r\n> 17-02-28 20:21:58.590 -08 000000058 INF: X Motor: Moved to 69.6982 after 685 ms 17-02-28 20:21:58.590 -08 000000058 INF: ====================================== 17-02-28 20:21:58.640 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:58.651 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:21:58.779 -08 000000051 INF: Y Motor: Unshifted Position: 2550668 17-02-28 20:21:58.829 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:58.901 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:58.953 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:58.964 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:21:58.964 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:21:58.964 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 17-02-28 20:21:58.982 -08 000000082 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:21:58.982 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:21:58.982 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:21:58.998 -08 000000082 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:21:59.000 -08 000000082 INF: ===================Camera Arm TDI=================== 17-02-28 20:21:59.002 -08 000000082 INF: ====================================== 17-02-28 20:21:59.004 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:21:59.005 -08 000000052 INF: ====================================== 17-02-28 20:21:59.089 -08 000000051 INF: Y Motor: Unshifted Position: 3333111 17-02-28 20:21:59.139 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:59.263 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:59.337 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:21:59.337 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:21:59.338 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:21:59.338 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°=================== 17-02-28 20:21:59.339 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°=================== 17-02-28 20:21:59.339 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°, FC temperature to 55°=================== 17-02-28 20:21:59.403 -08 000000051 INF: Y Motor: Unshifted Position: 4118184 17-02-28 20:21:59.453 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:59.577 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:59.712 -08 000000051 INF: Y Motor: Unshifted Position: 4893948 17-02-28 20:21:59.762 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:59.834 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°=================== 17-02-28 20:21:59.834 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°=================== 17-02-28 20:21:59.835 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°=================== 17-02-28 20:21:59.836 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°=================== 17-02-28 20:21:59.836 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:21:59.837 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:21:59.837 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:21:59.837 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:21:59.887 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:21:59.901 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:21:59.901 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Selecting Reagent HCM (7)=================== 17-02-28 20:21:59.901 -08 000000018 INF: Valve A1: Go to position 7 17-02-28 20:21:59.901 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-02-28 20:21:59.964 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 5\r 17-02-28 20:21:59.964 -08 000000018 INF: Valve A1: 25.676 seconds since last move, > 10.000 seconds required between moves 17-02-28 20:21:59.964 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 5 to 7 17-02-28 20:21:59.964 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW7\r 17-02-28 20:21:59.964 -08 000000018 INF: SerialPort A1 (VICIA1): Recv (discarded) 17-02-28 20:21:59.964 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-02-28 20:22:00.026 -08 000000051 INF: Y Motor: Unshifted Position: 5675396 17-02-28 20:22:00.076 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:00.202 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:00.338 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 7\r 17-02-28 20:22:00.338 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:00.338 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 17-02-28 20:22:00.340 -08 000000051 INF: Y Motor: Unshifted Position: 5955449 17-02-28 20:22:00.340 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:22:00.340 -08 000000051 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:00.403 -08 000000051 INF: Y Motor: Recv v 0\r 17-02-28 20:22:00.403 -08 000000051 INF: Y Motor: Moved to 64.5545 after 2374 ms 17-02-28 20:22:00.403 -08 000000051 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:22:00.463 -08 000000051 INF: Y Motor: Recv v 4096\r 17-02-28 20:22:00.463 -08 000000051 INF: Y Motor: Status After move finished OK: 17-02-28 20:22:00.463 -08 000000051 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:00.527 -08 000000051 INF: Y Motor: Recv v 0\r 17-02-28 20:22:00.527 -08 000000051 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:00.527 -08 000000051 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:22:00.587 -08 000000051 INF: Y Motor: Recv v 402653184\r 17-02-28 20:22:00.587 -08 000000051 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-02-28 20:22:00.587 -08 000000051 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:22:00.587 -08 000000051 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:22:00.649 -08 000000051 INF: Y Motor: Recv v 0\r 17-02-28 20:22:00.649 -08 000000051 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:22:00.649 -08 000000051 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:22:00.649 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:00.712 -08 000000051 INF: Y Motor: Recv ok\r 17-02-28 20:22:00.712 -08 000000051 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:22:00.712 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:00.773 -08 000000051 INF: Y Motor: Recv ok\r 17-02-28 20:22:00.773 -08 000000051 INF: ====================================== 17-02-28 20:22:00.774 -08 000000035 INF: ===================Move X,Y=================== 17-02-28 20:22:00.775 -08 000000035 INF: ====================================== 17-02-28 20:22:00.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:00.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:00.778 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-02-28 20:22:00.778 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-02-28 20:22:00.838 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:22:00.838 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-02-28 20:22:00.898 -08 000000036 INF: FPGA: Recv ZFREQCL 17-02-28 20:22:00.898 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-02-28 20:22:00.898 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:00.899 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:22:00.958 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:00.959 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-02-28 20:22:00.960 -08 000000072 INF: FPGA: Recv TDIYERD 6455449 17-02-28 20:22:00.960 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455449 counts (64.554 mm) 17-02-28 20:22:00.960 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:00.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:00.962 -08 000000039 INF: ===================TDI FPGA Arm=================== 17-02-28 20:22:00.962 -08 000000047 INF: ===================Set YMotor gains for scans=================== 17-02-28 20:22:00.962 -08 000000047 INF: ====================================== 17-02-28 20:22:00.962 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:22:00.963 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-02-28 20:22:00.963 -08 000000039 INF: FPGA: Xmit TDIYPOS 6344522\n 17-02-28 20:22:01.001 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:01.022 -08 000000051 INF: FPGA: Recv TDIYPOS 17-02-28 20:22:01.022 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:22:01.024 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-02-28 20:22:01.024 -08 000000039 INF: FPGA: Xmit TDIYARM3 139264 6435447 1 1\n 17-02-28 20:22:01.084 -08 000000078 INF: FPGA: Recv TDIYARM3 17-02-28 20:22:01.084 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:22:01.086 -08 000000039 INF: ===================TDI FPGA Arm=================== 17-02-28 20:22:01.086 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:22:01.087 -08 000000039 INF: ====================================== 17-02-28 20:22:01.087 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:01.088 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:01.088 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:01.089 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:01.089 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:01.090 -08 000000066 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-02-28 20:22:01.090 -08 000000108 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-02-28 20:22:01.090 -08 000000066 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-02-28 20:22:01.090 -08 000000066 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-02-28 20:22:01.090 -08 000000066 INF: Excitation Filter 2: Moving -107 steps 17-02-28 20:22:01.090 -08 000000066 INF: FPGA: Xmit EX2MV -107\n 17-02-28 20:22:01.091 -08 000000108 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-02-28 20:22:01.091 -08 000000108 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-02-28 20:22:01.091 -08 000000108 INF: Excitation Filter 1: Moving -107 steps 17-02-28 20:22:01.092 -08 000000108 INF: FPGA: Xmit EX1MV -107\n 17-02-28 20:22:01.094 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 7, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 62, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000 17-02-28 20:22:01.186 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:22:01.274 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 17-02-28 20:22:01.274 -08 000000018 INF: Current Position of Pump is: 0 17-02-28 20:22:01.374 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r 17-02-28 20:22:01.458 -08 000000039 INF: FPGA: Recv EX2MV 17-02-28 20:22:01.458 -08 000000039 INF: FPGA: Recv EX1MV 17-02-28 20:22:01.458 -08 000000108 INF: Excitation Filter 1: Moved -107 steps in 367.4317 ms 17-02-28 20:22:01.458 -08 000000108 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.6054 ms 17-02-28 20:22:01.458 -08 000000108 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.7142 ms 17-02-28 20:22:01.458 -08 000000066 INF: Excitation Filter 2: Moved -107 steps in 367.6492 ms 17-02-28 20:22:01.458 -08 000000066 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.0495 ms 17-02-28 20:22:01.458 -08 000000066 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.1187 ms 17-02-28 20:22:01.459 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:01.459 -08 000000108 INF: ====================================== 17-02-28 20:22:01.459 -08 000000066 INF: ====================================== 17-02-28 20:22:01.460 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:01.461 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:01.462 -08 000000101 INF: ===================Camera TDI=================== 17-02-28 20:22:01.462 -08 000000085 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:01.462 -08 000000058 INF: ===================FPGA Z Wait=================== 17-02-28 20:22:01.462 -08 000000047 INF: ===================Move Y Motor without settling=================== 17-02-28 20:22:01.462 -08 000000058 INF: FPGA: Xmit ZWAIT\n 17-02-28 20:22:01.462 -08 000000047 INF: Y Motor: Moving to 14.9061 mm @6.500 mm/sec, started at 64.5545 mm 17-02-28 20:22:01.462 -08 000000047 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:22:01.462 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:01.462 -08 000000101 INF: ===================Camera TDI, Parallel=================== 17-02-28 20:22:01.463 -08 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-02-28 20:22:01.463 -08 000000085 INF: FPGA: Xmit TDIYWAIT\n 17-02-28 20:22:01.463 -08 000000050 INF: ===================Camera TDI=================== 17-02-28 20:22:01.463 -08 000000036 INF: ===================Camera TDI=================== 17-02-28 20:22:01.465 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:01.465 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:01.466 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:01.466 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:01.522 -08 000000047 INF: Y Motor: Recv ok\r 17-02-28 20:22:01.522 -08 000000047 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:22:01.522 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:01.559 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:01.587 -08 000000047 INF: Y Motor: Recv ok\r 17-02-28 20:22:01.587 -08 000000047 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:01.615 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:01.615 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:01.618 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:01.618 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:01.648 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:01.649 -08 000000047 INF: Y Motor: Recv v 0\r 17-02-28 20:22:01.649 -08 000000047 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:01.649 -08 000000047 INF: Y Motor: Set target position to 990613 encoder counts 17-02-28 20:22:01.649 -08 000000047 INF: Y Motor: Xmit s r0xca 990613\r 17-02-28 20:22:01.711 -08 000000047 INF: Y Motor: Recv ok\r 17-02-28 20:22:01.711 -08 000000047 INF: Y Motor: Start the move command 17-02-28 20:22:01.711 -08 000000047 INF: Y Motor: Xmit t 1\r 17-02-28 20:22:01.765 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:01.765 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:01.768 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:01.768 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:01.773 -08 000000047 INF: Y Motor: Recv ok\r 17-02-28 20:22:01.773 -08 000000047 INF: Y Motor: WaitUntilStopped 67638 17-02-28 20:22:01.773 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:01.833 -08 000000109 INF: FPGA: Recv ZWAIT 17-02-28 20:22:01.834 -08 000000058 INF: ====================================== 17-02-28 20:22:01.898 -08 000000047 INF: Y Motor: Unshifted Position: 5893590 17-02-28 20:22:01.898 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:01.915 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-02-28 20:22:01.915 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-02-28 20:22:01.915 -08 000000050 INF: ===================Camera #0 Frame #4=================== 17-02-28 20:22:01.918 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:22:01.918 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:22:01.918 -08 000000036 INF: ===================Camera #2 Frame #5=================== 17-02-28 20:22:01.948 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:01.958 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:22:02.058 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r 17-02-28 20:22:02.071 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:02.078 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10. 17-02-28 20:22:02.078 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10 17-02-28 20:22:02.078 -08 000000050 INF: ===================Camera #0 Frame #10=================== 17-02-28 20:22:02.088 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-02-28 20:22:02.088 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-02-28 20:22:02.088 -08 000000036 INF: ===================Camera #2 Frame #11=================== 17-02-28 20:22:02.147 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:02.210 -08 000000047 INF: Y Motor: Unshifted Position: 5690149 17-02-28 20:22:02.247 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:02.252 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-02-28 20:22:02.252 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-02-28 20:22:02.252 -08 000000050 INF: ===================Camera #0 Frame #17=================== 17-02-28 20:22:02.257 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-02-28 20:22:02.257 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-02-28 20:22:02.257 -08 000000036 INF: ===================Camera #2 Frame #17=================== 17-02-28 20:22:02.260 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:02.334 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:22:02.334 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB=================== 17-02-28 20:22:02.384 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:02.424 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-02-28 20:22:02.424 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-02-28 20:22:02.424 -08 000000050 INF: ===================Camera #0 Frame #23=================== 17-02-28 20:22:02.426 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-02-28 20:22:02.426 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-02-28 20:22:02.426 -08 000000036 INF: ===================Camera #2 Frame #23=================== 17-02-28 20:22:02.434 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP11904R\r 17-02-28 20:22:02.521 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:02.522 -08 000000047 INF: Y Motor: Unshifted Position: 5487356 17-02-28 20:22:02.572 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:02.593 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-02-28 20:22:02.593 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-02-28 20:22:02.593 -08 000000050 INF: ===================Camera #0 Frame #29=================== 17-02-28 20:22:02.595 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30. 17-02-28 20:22:02.595 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30 17-02-28 20:22:02.595 -08 000000036 INF: ===================Camera #2 Frame #30=================== 17-02-28 20:22:02.621 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:02.697 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:02.709 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:02.763 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36. 17-02-28 20:22:02.763 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36 17-02-28 20:22:02.763 -08 000000050 INF: ===================Camera #0 Frame #36=================== 17-02-28 20:22:02.767 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36. 17-02-28 20:22:02.767 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36 17-02-28 20:22:02.767 -08 000000036 INF: ===================Camera #2 Frame #36=================== 17-02-28 20:22:02.834 -08 000000047 INF: Y Motor: Unshifted Position: 5284116 17-02-28 20:22:02.884 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:02.934 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-02-28 20:22:02.934 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-02-28 20:22:02.934 -08 000000050 INF: ===================Camera #0 Frame #42=================== 17-02-28 20:22:02.936 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-02-28 20:22:02.936 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-02-28 20:22:02.936 -08 000000036 INF: ===================Camera #2 Frame #42=================== 17-02-28 20:22:02.959 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:03.009 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:03.020 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:03.103 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-02-28 20:22:03.103 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-02-28 20:22:03.103 -08 000000050 INF: ===================Camera #0 Frame #48=================== 17-02-28 20:22:03.105 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-02-28 20:22:03.105 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-02-28 20:22:03.105 -08 000000036 INF: ===================Camera #2 Frame #48=================== 17-02-28 20:22:03.144 -08 000000047 INF: Y Motor: Unshifted Position: 5081959 17-02-28 20:22:03.194 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:03.270 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:03.271 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54. 17-02-28 20:22:03.271 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54 17-02-28 20:22:03.271 -08 000000050 INF: ===================Camera #0 Frame #54=================== 17-02-28 20:22:03.274 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55. 17-02-28 20:22:03.274 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55 17-02-28 20:22:03.274 -08 000000036 INF: ===================Camera #2 Frame #55=================== 17-02-28 20:22:03.320 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:03.333 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:03.440 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-02-28 20:22:03.440 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-02-28 20:22:03.442 -08 000000050 INF: ===================Camera #0 Frame #61=================== 17-02-28 20:22:03.457 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-02-28 20:22:03.457 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-02-28 20:22:03.457 -08 000000036 INF: ===================Camera #2 Frame #61=================== 17-02-28 20:22:03.458 -08 000000047 INF: Y Motor: Unshifted Position: 4878511 17-02-28 20:22:03.508 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:03.583 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:03.613 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-02-28 20:22:03.613 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-02-28 20:22:03.613 -08 000000050 INF: ===================Camera #0 Frame #67=================== 17-02-28 20:22:03.627 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68. 17-02-28 20:22:03.627 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68 17-02-28 20:22:03.627 -08 000000036 INF: ===================Camera #2 Frame #68=================== 17-02-28 20:22:03.632 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:03.643 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:03.770 -08 000000047 INF: Y Motor: Unshifted Position: 4676792 17-02-28 20:22:03.783 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-02-28 20:22:03.783 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-02-28 20:22:03.783 -08 000000050 INF: ===================Camera #0 Frame #73=================== 17-02-28 20:22:03.802 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74. 17-02-28 20:22:03.802 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74 17-02-28 20:22:03.802 -08 000000036 INF: ===================Camera #2 Frame #74=================== 17-02-28 20:22:03.820 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:03.893 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:03.946 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:03.951 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79. 17-02-28 20:22:03.951 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79 17-02-28 20:22:03.951 -08 000000050 INF: ===================Camera #0 Frame #79=================== 17-02-28 20:22:03.956 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:03.971 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80. 17-02-28 20:22:03.971 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80 17-02-28 20:22:03.971 -08 000000036 INF: ===================Camera #2 Frame #80=================== 17-02-28 20:22:04.082 -08 000000047 INF: Y Motor: Unshifted Position: 4472468 17-02-28 20:22:04.120 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-02-28 20:22:04.120 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-02-28 20:22:04.120 -08 000000050 INF: ===================Camera #0 Frame #86=================== 17-02-28 20:22:04.132 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:04.141 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-02-28 20:22:04.141 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-02-28 20:22:04.141 -08 000000036 INF: ===================Camera #2 Frame #86=================== 17-02-28 20:22:04.206 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:04.255 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:04.269 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:04.300 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-02-28 20:22:04.300 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-02-28 20:22:04.300 -08 000000050 INF: ===================Camera #0 Frame #92=================== 17-02-28 20:22:04.319 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93. 17-02-28 20:22:04.319 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93 17-02-28 20:22:04.319 -08 000000036 INF: ===================Camera #2 Frame #93=================== 17-02-28 20:22:04.393 -08 000000047 INF: Y Motor: Unshifted Position: 4270322 17-02-28 20:22:04.443 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:04.476 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99. 17-02-28 20:22:04.476 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99 17-02-28 20:22:04.476 -08 000000050 INF: ===================Camera #0 Frame #99=================== 17-02-28 20:22:04.499 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100. 17-02-28 20:22:04.499 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100 17-02-28 20:22:04.499 -08 000000036 INF: ===================Camera #2 Frame #100=================== 17-02-28 20:22:04.519 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:04.569 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:04.580 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:04.658 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105. 17-02-28 20:22:04.658 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105 17-02-28 20:22:04.658 -08 000000050 INF: ===================Camera #0 Frame #105=================== 17-02-28 20:22:04.682 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106. 17-02-28 20:22:04.682 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106 17-02-28 20:22:04.682 -08 000000036 INF: ===================Camera #2 Frame #106=================== 17-02-28 20:22:04.705 -08 000000047 INF: Y Motor: Unshifted Position: 4067510 17-02-28 20:22:04.755 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:04.830 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:04.834 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112. 17-02-28 20:22:04.834 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112 17-02-28 20:22:04.834 -08 000000050 INF: ===================Camera #0 Frame #112=================== 17-02-28 20:22:04.852 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113. 17-02-28 20:22:04.852 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113 17-02-28 20:22:04.852 -08 000000036 INF: ===================Camera #2 Frame #113=================== 17-02-28 20:22:04.879 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:04.892 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:05.010 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118. 17-02-28 20:22:05.010 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118 17-02-28 20:22:05.010 -08 000000050 INF: ===================Camera #0 Frame #118=================== 17-02-28 20:22:05.017 -08 000000047 INF: Y Motor: Unshifted Position: 3864497 17-02-28 20:22:05.027 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119. 17-02-28 20:22:05.027 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119 17-02-28 20:22:05.027 -08 000000036 INF: ===================Camera #2 Frame #119=================== 17-02-28 20:22:05.067 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:05.142 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:05.180 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125. 17-02-28 20:22:05.180 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125 17-02-28 20:22:05.180 -08 000000050 INF: ===================Camera #0 Frame #125=================== 17-02-28 20:22:05.193 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:05.196 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125. 17-02-28 20:22:05.196 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125 17-02-28 20:22:05.196 -08 000000036 INF: ===================Camera #2 Frame #125=================== 17-02-28 20:22:05.204 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:05.329 -08 000000047 INF: Y Motor: Unshifted Position: 3661691 17-02-28 20:22:05.351 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131. 17-02-28 20:22:05.351 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131 17-02-28 20:22:05.351 -08 000000050 INF: ===================Camera #0 Frame #131=================== 17-02-28 20:22:05.365 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131. 17-02-28 20:22:05.365 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132 17-02-28 20:22:05.365 -08 000000036 INF: ===================Camera #2 Frame #132=================== 17-02-28 20:22:05.379 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:05.454 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:05.504 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:05.517 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:05.519 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137. 17-02-28 20:22:05.519 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137 17-02-28 20:22:05.519 -08 000000050 INF: ===================Camera #0 Frame #137=================== 17-02-28 20:22:05.548 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138. 17-02-28 20:22:05.548 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138 17-02-28 20:22:05.548 -08 000000036 INF: ===================Camera #2 Frame #138=================== 17-02-28 20:22:05.640 -08 000000047 INF: Y Motor: Unshifted Position: 3458031 17-02-28 20:22:05.687 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143. 17-02-28 20:22:05.687 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143 17-02-28 20:22:05.687 -08 000000050 INF: ===================Camera #0 Frame #143=================== 17-02-28 20:22:05.690 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:05.717 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144. 17-02-28 20:22:05.717 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144 17-02-28 20:22:05.717 -08 000000036 INF: ===================Camera #2 Frame #144=================== 17-02-28 20:22:05.767 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:05.816 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:05.827 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:05.855 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150. 17-02-28 20:22:05.855 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150 17-02-28 20:22:05.855 -08 000000050 INF: ===================Camera #0 Frame #150=================== 17-02-28 20:22:05.887 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151. 17-02-28 20:22:05.887 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151 17-02-28 20:22:05.887 -08 000000036 INF: ===================Camera #2 Frame #151=================== 17-02-28 20:22:05.954 -08 000000047 INF: Y Motor: Unshifted Position: 3256534 17-02-28 20:22:06.004 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:06.026 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156. 17-02-28 20:22:06.026 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156 17-02-28 20:22:06.026 -08 000000050 INF: ===================Camera #0 Frame #156=================== 17-02-28 20:22:06.059 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157. 17-02-28 20:22:06.059 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157 17-02-28 20:22:06.059 -08 000000036 INF: ===================Camera #2 Frame #157=================== 17-02-28 20:22:06.077 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:06.131 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:06.140 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:06.194 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162. 17-02-28 20:22:06.194 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162 17-02-28 20:22:06.194 -08 000000050 INF: ===================Camera #0 Frame #162=================== 17-02-28 20:22:06.230 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163. 17-02-28 20:22:06.230 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163 17-02-28 20:22:06.230 -08 000000036 INF: ===================Camera #2 Frame #163=================== 17-02-28 20:22:06.266 -08 000000047 INF: Y Motor: Unshifted Position: 3052222 17-02-28 20:22:06.317 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:06.364 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-02-28 20:22:06.364 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-02-28 20:22:06.364 -08 000000050 INF: ===================Camera #0 Frame #168=================== 17-02-28 20:22:06.391 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:06.400 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170. 17-02-28 20:22:06.400 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170 17-02-28 20:22:06.400 -08 000000036 INF: ===================Camera #2 Frame #170=================== 17-02-28 20:22:06.441 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:06.452 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:06.536 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175. 17-02-28 20:22:06.536 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175 17-02-28 20:22:06.536 -08 000000050 INF: ===================Camera #0 Frame #175=================== 17-02-28 20:22:06.572 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176. 17-02-28 20:22:06.572 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176 17-02-28 20:22:06.572 -08 000000036 INF: ===================Camera #2 Frame #176=================== 17-02-28 20:22:06.579 -08 000000047 INF: Y Motor: Unshifted Position: 2849425 17-02-28 20:22:06.629 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:06.702 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:06.707 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181. 17-02-28 20:22:06.707 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181 17-02-28 20:22:06.707 -08 000000050 INF: ===================Camera #0 Frame #181=================== 17-02-28 20:22:06.741 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182. 17-02-28 20:22:06.741 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182 17-02-28 20:22:06.741 -08 000000036 INF: ===================Camera #2 Frame #182=================== 17-02-28 20:22:06.754 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:06.765 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:06.875 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-02-28 20:22:06.875 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-02-28 20:22:06.875 -08 000000050 INF: ===================Camera #0 Frame #187=================== 17-02-28 20:22:06.890 -08 000000047 INF: Y Motor: Unshifted Position: 2647062 17-02-28 20:22:06.910 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188. 17-02-28 20:22:06.910 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188 17-02-28 20:22:06.910 -08 000000036 INF: ===================Camera #2 Frame #188=================== 17-02-28 20:22:06.940 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:07.015 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:07.043 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193. 17-02-28 20:22:07.043 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193 17-02-28 20:22:07.043 -08 000000050 INF: ===================Camera #0 Frame #193=================== 17-02-28 20:22:07.066 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:07.077 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:07.080 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195. 17-02-28 20:22:07.080 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195 17-02-28 20:22:07.080 -08 000000036 INF: ===================Camera #2 Frame #195=================== 17-02-28 20:22:07.202 -08 000000047 INF: Y Motor: Unshifted Position: 2444266 17-02-28 20:22:07.212 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199. 17-02-28 20:22:07.212 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199 17-02-28 20:22:07.212 -08 000000050 INF: ===================Camera #0 Frame #199=================== 17-02-28 20:22:07.252 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:07.252 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201. 17-02-28 20:22:07.252 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201 17-02-28 20:22:07.252 -08 000000036 INF: ===================Camera #2 Frame #201=================== 17-02-28 20:22:07.327 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:07.378 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:07.380 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-02-28 20:22:07.380 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-02-28 20:22:07.380 -08 000000050 INF: ===================Camera #0 Frame #206=================== 17-02-28 20:22:07.389 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:07.421 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207. 17-02-28 20:22:07.421 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207 17-02-28 20:22:07.421 -08 000000036 INF: ===================Camera #2 Frame #207=================== 17-02-28 20:22:07.515 -08 000000047 INF: Y Motor: Unshifted Position: 2240595 17-02-28 20:22:07.551 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212. 17-02-28 20:22:07.551 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212 17-02-28 20:22:07.551 -08 000000050 INF: ===================Camera #0 Frame #212=================== 17-02-28 20:22:07.565 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:07.590 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213. 17-02-28 20:22:07.590 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213 17-02-28 20:22:07.590 -08 000000036 INF: ===================Camera #2 Frame #213=================== 17-02-28 20:22:07.639 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:07.689 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:07.699 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:07.719 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218. 17-02-28 20:22:07.719 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218 17-02-28 20:22:07.719 -08 000000050 INF: ===================Camera #0 Frame #218=================== 17-02-28 20:22:07.759 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220. 17-02-28 20:22:07.759 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220 17-02-28 20:22:07.759 -08 000000036 INF: ===================Camera #2 Frame #220=================== 17-02-28 20:22:07.825 -08 000000047 INF: Y Motor: Unshifted Position: 2037149 17-02-28 20:22:07.875 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:07.887 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224. 17-02-28 20:22:07.887 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224 17-02-28 20:22:07.887 -08 000000050 INF: ===================Camera #0 Frame #224=================== 17-02-28 20:22:07.931 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226. 17-02-28 20:22:07.931 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226 17-02-28 20:22:07.931 -08 000000036 INF: ===================Camera #2 Frame #226=================== 17-02-28 20:22:07.949 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:08.003 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:08.012 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:08.055 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231. 17-02-28 20:22:08.055 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231 17-02-28 20:22:08.056 -08 000000050 INF: ===================Camera #0 Frame #231=================== 17-02-28 20:22:08.100 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232. 17-02-28 20:22:08.100 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232 17-02-28 20:22:08.100 -08 000000036 INF: ===================Camera #2 Frame #232=================== 17-02-28 20:22:08.139 -08 000000047 INF: Y Motor: Unshifted Position: 1835427 17-02-28 20:22:08.189 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:08.226 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237. 17-02-28 20:22:08.226 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237 17-02-28 20:22:08.226 -08 000000050 INF: ===================Camera #0 Frame #237=================== 17-02-28 20:22:08.262 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:08.269 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238. 17-02-28 20:22:08.269 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238 17-02-28 20:22:08.269 -08 000000036 INF: ===================Camera #2 Frame #238=================== 17-02-28 20:22:08.316 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:08.326 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:08.394 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243. 17-02-28 20:22:08.394 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243 17-02-28 20:22:08.394 -08 000000050 INF: ===================Camera #0 Frame #243=================== 17-02-28 20:22:08.438 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245. 17-02-28 20:22:08.438 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245 17-02-28 20:22:08.438 -08 000000036 INF: ===================Camera #2 Frame #245=================== 17-02-28 20:22:08.449 -08 000000047 INF: Y Motor: Unshifted Position: 1631974 17-02-28 20:22:08.499 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:08.562 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249. 17-02-28 20:22:08.562 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249 17-02-28 20:22:08.562 -08 000000050 INF: ===================Camera #0 Frame #249=================== 17-02-28 20:22:08.576 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:08.610 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251. 17-02-28 20:22:08.610 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251 17-02-28 20:22:08.610 -08 000000036 INF: ===================Camera #2 Frame #251=================== 17-02-28 20:22:08.625 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:08.636 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:08.730 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255. 17-02-28 20:22:08.730 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255 17-02-28 20:22:08.730 -08 000000050 INF: ===================Camera #0 Frame #255=================== 17-02-28 20:22:08.763 -08 000000047 INF: Y Motor: Unshifted Position: 1428957 17-02-28 20:22:08.780 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257. 17-02-28 20:22:08.780 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257 17-02-28 20:22:08.780 -08 000000036 INF: ===================Camera #2 Frame #257=================== 17-02-28 20:22:08.813 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:08.886 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:08.898 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262. 17-02-28 20:22:08.898 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262 17-02-28 20:22:08.898 -08 000000050 INF: ===================Camera #0 Frame #262=================== 17-02-28 20:22:08.938 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:08.949 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:08.949 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263. 17-02-28 20:22:08.949 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263 17-02-28 20:22:08.949 -08 000000036 INF: ===================Camera #2 Frame #263=================== 17-02-28 20:22:09.069 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268. 17-02-28 20:22:09.069 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268 17-02-28 20:22:09.069 -08 000000050 INF: ===================Camera #0 Frame #268=================== 17-02-28 20:22:09.074 -08 000000047 INF: Y Motor: Unshifted Position: 1226148 17-02-28 20:22:09.118 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270. 17-02-28 20:22:09.118 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270 17-02-28 20:22:09.118 -08 000000036 INF: ===================Camera #2 Frame #270=================== 17-02-28 20:22:09.124 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:09.196 -08 000000105 INF: FPGA: Recv TDIYWAIT 17-02-28 20:22:09.196 -08 000000085 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:09.198 -08 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-02-28 20:22:09.199 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:09.199 -08 000000104 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-02-28 20:22:09.199 -08 000000030 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-02-28 20:22:09.199 -08 000000104 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-02-28 20:22:09.199 -08 000000104 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-02-28 20:22:09.199 -08 000000104 INF: Excitation Filter 2: Moving 107 steps 17-02-28 20:22:09.199 -08 000000030 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-02-28 20:22:09.199 -08 000000104 INF: FPGA: Xmit EX2MV 107\n 17-02-28 20:22:09.199 -08 000000030 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-02-28 20:22:09.199 -08 000000030 INF: Excitation Filter 1: Moving 107 steps 17-02-28 20:22:09.200 -08 000000030 INF: FPGA: Xmit EX1MV 107\n 17-02-28 20:22:09.237 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:22:09.237 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:22:09.237 -08 000000050 INF: ===================Camera #0 Frame #272=================== 17-02-28 20:22:09.248 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:09.249 -08 000000050 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:22:09.250 -08 000000050 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:22:09.261 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:09.377 -08 000000050 INF: Camera #0 ReleaseBuffer 17-02-28 20:22:09.377 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:22:09.377 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:22:09.377 -08 000000036 INF: ===================Camera #2 Frame #272=================== 17-02-28 20:22:09.377 -08 000000050 INF: ===================Camera TDI=================== 17-02-28 20:22:09.383 -08 000000036 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:22:09.384 -08 000000036 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:22:09.386 -08 000000047 INF: Y Motor: Unshifted Position: 1023786 17-02-28 20:22:09.405 -08 000000050 INF: ====================================== 17-02-28 20:22:09.436 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:09.511 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:09.550 -08 000000036 INF: Camera #2 ReleaseBuffer 17-02-28 20:22:09.550 -08 000000036 INF: ===================Camera TDI=================== 17-02-28 20:22:09.570 -08 000000046 INF: FPGA: Recv EX2MV 17-02-28 20:22:09.570 -08 000000046 INF: FPGA: Recv EX1MV 17-02-28 20:22:09.570 -08 000000030 INF: Excitation Filter 1: Moved 107 steps in 370.8566 ms 17-02-28 20:22:09.570 -08 000000104 INF: Excitation Filter 2: Moved 107 steps in 371.0413 ms 17-02-28 20:22:09.570 -08 000000030 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.0011 ms 17-02-28 20:22:09.570 -08 000000030 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.1159 ms 17-02-28 20:22:09.570 -08 000000104 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.1436 ms 17-02-28 20:22:09.570 -08 000000104 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.3197 ms 17-02-28 20:22:09.570 -08 000000030 INF: ====================================== 17-02-28 20:22:09.570 -08 000000104 INF: ====================================== 17-02-28 20:22:09.571 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:09.572 -08 000000047 INF: Y Motor: Unshifted Position: 990613 17-02-28 20:22:09.572 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:22:09.572 -08 000000047 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:09.572 -08 000000085 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:09.573 -08 000000085 INF: ====================================== 17-02-28 20:22:09.583 -08 000000036 INF: ====================================== 17-02-28 20:22:09.584 -08 000000101 INF: ===================Camera TDI=================== 17-02-28 20:22:09.586 -08 000000101 INF: ====================================== 17-02-28 20:22:09.637 -08 000000047 INF: Y Motor: Recv v 0\r 17-02-28 20:22:09.637 -08 000000047 INF: Y Motor: Moved to 14.9061 after 7863 ms 17-02-28 20:22:09.637 -08 000000047 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:22:09.699 -08 000000047 INF: Y Motor: Recv v 4097\r 17-02-28 20:22:09.699 -08 000000047 INF: Y Motor: Status After move finished OK: 17-02-28 20:22:09.699 -08 000000047 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:09.761 -08 000000047 INF: Y Motor: Recv v 0\r 17-02-28 20:22:09.761 -08 000000047 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:09.761 -08 000000047 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:22:09.821 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:09.825 -08 000000047 INF: Y Motor: Recv v 134217728\r 17-02-28 20:22:09.825 -08 000000047 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-02-28 20:22:09.825 -08 000000047 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:22:09.825 -08 000000047 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:22:09.883 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:09.884 -08 000000047 INF: Y Motor: Recv v 0\r 17-02-28 20:22:09.884 -08 000000047 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:22:09.884 -08 000000047 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:22:09.884 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:09.949 -08 000000047 INF: Y Motor: Recv ok\r 17-02-28 20:22:09.949 -08 000000047 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:22:09.949 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:10.009 -08 000000047 INF: Y Motor: Recv ok\r 17-02-28 20:22:10.009 -08 000000047 INF: ====================================== 17-02-28 20:22:10.010 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:10.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:10.012 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:10.012 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-02-28 20:22:10.069 -08 000000099 INF: FPGA: Recv TDICLINES 1023 17-02-28 20:22:10.069 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:22:10.133 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:10.134 -08 000000109 INF: FPGA: Recv TDIYERD 1490614 17-02-28 20:22:10.134 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-02-28 20:22:10.196 -08 000000075 INF: FPGA: Recv ZADCR 31998 17-02-28 20:22:10.196 -08 000000042 INF: At scan end Y pos = 14.906 and Z pos = -0.122. Y moved -48.539 mm 17-02-28 20:22:10.196 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-02-28 20:22:10.197 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:10.258 -08 000000108 INF: FPGA: Recv TDIPULSES 139265 17-02-28 20:22:10.258 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-02-28 20:22:10.258 -08 000000042 INF: TDIScan finished after 12670.1386 ms 17-02-28 20:22:10.258 -08 000000042 INF: Image[0]: Y should trigger at 63.445 mm, 2nd row was at 64.354 mm (error = 0.909 mm) 17-02-28 20:22:10.258 -08 000000042 INF: Image[2]: Y should trigger at 63.445 mm, 2nd row was at 64.354 mm (error = 0.909 mm) 17-02-28 20:22:10.260 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:10.294 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.738 um 17-02-28 20:22:10.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:10.295 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-02-28 20:22:10.319 -08 000000059 INF: FPGA: Recv SWOOF_RDSTAT 0 17-02-28 20:22:10.320 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:10.320 -08 000000036 INF: ===================Dither Clean Up Command=================== 17-02-28 20:22:10.320 -08 000000086 INF: ===================Set YMotor gains for fast moves=================== 17-02-28 20:22:10.320 -08 000000089 INF: ===================Set Y Motor Motor Velocity=================== 17-02-28 20:22:10.320 -08 000000039 INF: ===================Set Z Motor Motor Velocity=================== 17-02-28 20:22:10.321 -08 000000089 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:22:10.321 -08 000000089 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:22:10.321 -08 000000086 INF: ====================================== 17-02-28 20:22:10.321 -08 000000039 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-02-28 20:22:10.321 -08 000000039 INF: FPGA: Xmit ZSTEP 1288471\n 17-02-28 20:22:10.321 -08 000000047 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:22:10.321 -08 000000051 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:22:10.322 -08 000000047 INF: FPGA: Xmit ZSEL 0\n 17-02-28 20:22:10.324 -08 000000051 INF: ===================LFT:Extracting coords=================== 17-02-28 20:22:10.349 -08 000000051 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:22:10.350 -08 000000051 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-02-28 20:22:10.351 -08 000000109 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:10.351 -08 000000050 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:10.351 -08 000000033 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:10.351 -08 000000078 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:10.351 -08 000000109 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:22:10.351 -08 000000050 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:22:10.351 -08 000000078 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:22:10.351 -08 000000033 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:22:10.381 -08 000000073 INF: FPGA: Recv ZSTEP 17-02-28 20:22:10.381 -08 000000073 INF: FPGA: Recv ZSEL 17-02-28 20:22:10.381 -08 000000047 INF: FPGA: Xmit ZDACW 39366\n 17-02-28 20:22:10.381 -08 000000039 INF: ====================================== 17-02-28 20:22:10.383 -08 000000089 INF: Y Motor: Recv ok\r 17-02-28 20:22:10.383 -08 000000089 INF: ====================================== 17-02-28 20:22:10.425 -08 000000109 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:22:10.425 -08 000000050 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:22:10.426 -08 000000033 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:22:10.434 -08 000000078 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:22:10.444 -08 000000105 INF: FPGA: Recv ZDACW 17-02-28 20:22:10.445 -08 000000047 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-02-28 20:22:10.445 -08 000000047 INF: FPGA: Xmit TDIBB 0\n 17-02-28 20:22:10.447 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:10.506 -08 000000086 INF: FPGA: Recv TDIBB 17-02-28 20:22:10.506 -08 000000047 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:22:10.507 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:10.507 -08 000000047 INF: ====================================== 17-02-28 20:22:10.576 -08 000000050 INF: LFT found best fwhm score 2.000378 in 151 ms 17-02-28 20:22:10.577 -08 000000050 INF: LFT found good score at index 1493 with fwhm value 2.000378. Next cycle, cycle 4 starting Z position for top surface is at -0.152 mm FC:B, C:3,L:1,T 17-02-28 20:22:10.577 -08 000000109 INF: LFT found best fwhm score 2.000627 in 152 ms 17-02-28 20:22:10.577 -08 000000109 INF: LFT found good score at index 3121 with fwhm value 2.000627. Next cycle, cycle 4 starting Z position for top surface is at -0.152 mm FC:B, C:3,L:1,T 17-02-28 20:22:10.577 -08 000000050 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:10.577 -08 000000109 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:10.577 -08 000000050 INF: ====================================== 17-02-28 20:22:10.577 -08 000000033 INF: LFT found best fwhm score 2.000098 in 151 ms 17-02-28 20:22:10.577 -08 000000033 INF: LFT found good score at index 8729 with fwhm value 2.000098. Next cycle, cycle 4 starting Z position for top surface is at -0.151 mm FC:B, C:3,L:1,T 17-02-28 20:22:10.577 -08 000000109 INF: ====================================== 17-02-28 20:22:10.577 -08 000000033 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:10.578 -08 000000033 INF: ====================================== 17-02-28 20:22:10.599 -08 000000078 INF: LFT found best fwhm score 2.08486 in 165 ms 17-02-28 20:22:10.599 -08 000000078 INF: LFT found good score at index 7137 with fwhm value 2.08486. Next cycle, cycle 4 starting Z position for top surface is at -0.151 mm FC:B, C:3,L:1,T 17-02-28 20:22:10.599 -08 000000078 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:10.599 -08 000000078 INF: ====================================== 17-02-28 20:22:10.601 -08 000000051 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:22:10.602 -08 000000051 INF: LFT weighted average best Z for top surface is at -0.151mm FC:B, C:3,L:1,T 17-02-28 20:22:10.602 -08 000000051 INF: ====================================== 17-02-28 20:22:10.603 -08 000000036 INF: ====================================== 17-02-28 20:22:10.604 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:10.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-02-28 20:22:10.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:10.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-02-28 20:22:10.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:10.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-02-28 20:22:10.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:10.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-02-28 20:22:10.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:10.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308=================== 17-02-28 20:22:10.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308=================== 17-02-28 20:22:10.607 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB, Waiting for image analysis=================== 17-02-28 20:22:10.607 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB=================== 17-02-28 20:22:10.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Waiting for image analysis=================== 17-02-28 20:22:10.608 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308=================== 17-02-28 20:22:10.630 -08 000000042 INF: Waited 23 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 17-02-28 20:22:10.630 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:22:10.631 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:22:10.631 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:10.631 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-02-28 20:22:10.631 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1=================== 17-02-28 20:22:10.632 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface=================== 17-02-28 20:22:10.648 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:10.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:10.650 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:22:10.650 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:22:10.696 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":1,"Tile":1201,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF202","HCSMMF199","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.747 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:22:10.747 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:10.748 -08 000000042 INF: Compensator: Moving OutOfPath 17-02-28 20:22:10.748 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n 17-02-28 20:22:10.757 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:10.867 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:10.872 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":1,"Tile":1209,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF270","HCSMMF208","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.882 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":1,"Tile":1203,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF200","HCSMMF210","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.886 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":1,"Tile":1208,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF232","HCSMMF181","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.889 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":1,"Tile":1212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF189","HCSMMF260","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.891 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":1,"Tile":1210,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF195","HCSMMF223","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.892 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":1,"Tile":1205,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF179","HCSMMF188","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.894 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":1,"Tile":1202,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF271","HCSMMF193","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.896 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":1,"Tile":1211,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF256","HCSMMF217","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.899 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":1,"Tile":1207,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF264","HCSMMF258","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.930 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":1,"Tile":1206,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF272","HCSMMF231","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.931 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":1,"Tile":1217,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF225","HCSMMF201","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.932 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":1,"Tile":1214,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF247","HCSMMF176","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.933 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":1,"Tile":1204,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF237","HCSMMF191","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.934 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":1,"Tile":1213,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF212","HCSMMF187","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.935 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":1,"Tile":1215,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF233","HCSMMF255","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.935 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":1,"Tile":1216,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF183","HCSMMF287","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.936 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":1,"Tile":1218,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF262","HCSMMF269","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.937 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":1,"Tile":1222,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF203","HCSMMF280","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.938 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":1,"Tile":1219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF207","HCSMMF263","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.944 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":1,"Tile":1225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF268","HCSMMF196","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.945 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":1,"Tile":1226,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF177","HCSMMF277","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.945 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":1,"Tile":1228,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF282","HCSMMF230","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.946 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":1,"Tile":1220,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF197","HCSMMF205","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.947 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":1,"Tile":1227,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF246","HCSMMF238","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.947 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":1,"Tile":1221,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF216","HCSMMF239","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.950 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":1,"Tile":1223,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF267","HCSMMF274","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.951 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":1,"Tile":1224,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF206","HCSMMF244","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:10.953 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:10.959 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-02-28 20:22:11.056 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:11.056 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-02-28 20:22:11.092 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:11.098 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-02-28 20:22:11.115 -08 000000095 INF: FPGA: Recv MIOCOMPR 17-02-28 20:22:11.115 -08 000000042 INF: Compensator: Moved OutOfPath in 367 ms 17-02-28 20:22:11.115 -08 000000042 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908 17-02-28 20:22:11.116 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:11.117 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:11.118 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:11.118 -08 000000089 INF: ===================Move Tilt Motor 1=================== 17-02-28 20:22:11.118 -08 000000109 INF: ===================Move Tilt Motor 2=================== 17-02-28 20:22:11.118 -08 000000089 INF: Tilt Motor 1: Moving to 5.0005 mm, started at 5.0762 mm, delta = -0.0757 mm 17-02-28 20:22:11.118 -08 000000089 INF: FPGA: Xmit T1RD\n 17-02-28 20:22:11.118 -08 000000109 INF: Tilt Motor 2: Moving to 5.3924 mm, started at 5.2642 mm, delta = 0.1283 mm 17-02-28 20:22:11.118 -08 000000075 INF: ===================Move Tilt Motor 3=================== 17-02-28 20:22:11.118 -08 000000075 INF: Tilt Motor 3: Moving to 5.3391 mm, started at 5.2113 mm, delta = 0.1278 mm 17-02-28 20:22:11.119 -08 000000109 INF: FPGA: Xmit T2RD\n 17-02-28 20:22:11.121 -08 000000075 INF: FPGA: Xmit T3RD\n 17-02-28 20:22:11.177 -08 000000078 INF: FPGA: Recv T1RD 19984 17-02-28 20:22:11.177 -08 000000078 INF: FPGA: Recv T2RD 20725 17-02-28 20:22:11.177 -08 000000078 INF: FPGA: Recv T3RD 20517 17-02-28 20:22:11.177 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6 17-02-28 20:22:11.177 -08 000000075 INF: Tilt Motor 3: Moving to 21020 encoder counts 17-02-28 20:22:11.177 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3454 + 1/6 17-02-28 20:22:11.177 -08 000000109 INF: Tilt Motor 2: Moving to 21230 encoder counts 17-02-28 20:22:11.177 -08 000000075 INF: FPGA: Xmit T3MOVETO 21020\n 17-02-28 20:22:11.177 -08 000000089 INF: Tilt Motor 1: Encoder: at motor step 3330 + 4/6 17-02-28 20:22:11.177 -08 000000089 INF: Tilt Motor 1: Moving to 19687 encoder counts 17-02-28 20:22:11.178 -08 000000089 INF: FPGA: Xmit T1MOVETO 19687\n 17-02-28 20:22:11.179 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:11.180 -08 000000109 INF: FPGA: Xmit T2MOVETO 21230\n 17-02-28 20:22:11.210 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:11.216 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-02-28 20:22:11.315 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:11.321 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-02-28 20:22:11.365 -08 000000087 INF: FPGA: Recv T1MOVETO 49 17-02-28 20:22:11.365 -08 000000089 INF: Tilt Motor 1: To move from 5.076 to 5.000 (-0.076 mm) should take 50 steps, but required 49 steps (0.075 mm). Slippage = -0.002 mm (0.02%) 17-02-28 20:22:11.365 -08 000000089 INF: FPGA: Xmit T1RD\n 17-02-28 20:22:11.405 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:11.429 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:11.429 -08 000000039 INF: FPGA: Recv T1RD 19693 17-02-28 20:22:11.429 -08 000000039 INF: FPGA: Recv T3MOVETO 83 17-02-28 20:22:11.429 -08 000000039 INF: FPGA: Recv T2MOVETO 83 17-02-28 20:22:11.430 -08 000000109 INF: Tilt Motor 2: To move from 5.264 to 5.392 (0.128 mm) should take 84 steps, but required 83 steps (0.126 mm). Slippage = -0.002 mm (-0.01%) 17-02-28 20:22:11.430 -08 000000075 INF: Tilt Motor 3: To move from 5.211 to 5.339 (0.128 mm) should take 84 steps, but required 83 steps (0.126 mm). Slippage = -0.002 mm (-0.01%) 17-02-28 20:22:11.430 -08 000000089 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6 17-02-28 20:22:11.430 -08 000000109 INF: FPGA: Xmit T2RD\n 17-02-28 20:22:11.431 -08 000000075 INF: FPGA: Xmit T3RD\n 17-02-28 20:22:11.433 -08 000000089 INF: FPGA: Xmit T1RD\n 17-02-28 20:22:11.490 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:11.491 -08 000000108 INF: FPGA: Recv T2RD 21224 17-02-28 20:22:11.491 -08 000000108 INF: FPGA: Recv T3RD 21015 17-02-28 20:22:11.491 -08 000000108 INF: FPGA: Recv T1RD 19693 17-02-28 20:22:11.491 -08 000000089 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6 17-02-28 20:22:11.491 -08 000000089 INF: FPGA: Xmit T1RD\n 17-02-28 20:22:11.491 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6 17-02-28 20:22:11.491 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6 17-02-28 20:22:11.492 -08 000000075 INF: FPGA: Xmit T3RD\n 17-02-28 20:22:11.494 -08 000000109 INF: FPGA: Xmit T2RD\n 17-02-28 20:22:11.552 -08 000000037 INF: FPGA: Recv T1RD 19693 17-02-28 20:22:11.552 -08 000000037 INF: FPGA: Recv T3RD 21015 17-02-28 20:22:11.552 -08 000000037 INF: FPGA: Recv T2RD 21224 17-02-28 20:22:11.552 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6 17-02-28 20:22:11.552 -08 000000089 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6 17-02-28 20:22:11.552 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6 17-02-28 20:22:11.552 -08 000000109 INF: FPGA: Xmit T2RD\n 17-02-28 20:22:11.552 -08 000000089 INF: Tilt Motor 1: After move to 5.0005, error = 0.0015, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:22:11.552 -08 000000089 INF: Tilt Motor 1: Moved to 5.0020 after 434.3166 ms 17-02-28 20:22:11.552 -08 000000089 INF: ====================================== 17-02-28 20:22:11.553 -08 000000075 INF: FPGA: Xmit T3RD\n 17-02-28 20:22:11.617 -08 000000036 INF: FPGA: Recv T2RD 21224 17-02-28 20:22:11.617 -08 000000036 INF: FPGA: Recv T3RD 21015 17-02-28 20:22:11.617 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6 17-02-28 20:22:11.617 -08 000000075 INF: Tilt Motor 3: After move to 5.3391, error = -0.0013, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:22:11.617 -08 000000075 INF: Tilt Motor 3: Moved to 5.3378 after 498.9889 ms 17-02-28 20:22:11.617 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6 17-02-28 20:22:11.617 -08 000000109 INF: Tilt Motor 2: After move to 5.3924, error = -0.0015, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:22:11.617 -08 000000109 INF: Tilt Motor 2: Moved to 5.3909 after 499.4817 ms 17-02-28 20:22:11.617 -08 000000075 INF: ====================================== 17-02-28 20:22:11.618 -08 000000109 INF: ====================================== 17-02-28 20:22:11.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:11.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:11.626 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm. 17-02-28 20:22:11.634 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm. 17-02-28 20:22:11.634 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-02-28 20:22:11.634 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-02-28 20:22:11.634 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-02-28 20:22:11.635 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-02-28 20:22:11.638 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0 17-02-28 20:22:11.638 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format 17-02-28 20:22:11.639 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n 17-02-28 20:22:11.678 -08 000000078 INF: FPGA: Recv ZSTEP 17-02-28 20:22:11.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-02-28 20:22:11.679 -08 000000042 INF: Z Motor: Entering MoveAbsStepped 17-02-28 20:22:11.679 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1502 mm 17-02-28 20:22:11.679 -08 000000042 INF: FPGA: Xmit ZTRG 0\n 17-02-28 20:22:11.692 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-02-28 20:22:11.740 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:11.740 -08 000000035 INF: FPGA: Recv ZTRG 17-02-28 20:22:11.740 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n 17-02-28 20:22:11.806 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:11.807 -08 000000090 INF: FPGA: Recv ZYT 17-02-28 20:22:11.807 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-02-28 20:22:11.807 -08 000000042 INF: FPGA: Xmit ZMV 60292\n 17-02-28 20:22:11.863 -08 000000086 INF: FPGA: Recv @LOG Trigger Camera 17-02-28 20:22:11.863 -08 000000086 INF: FPGA: Recv ZMV 17-02-28 20:22:11.863 -08 000000006 INF: FPGA: Trigger Camera 17-02-28 20:22:11.863 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 55.5507 ms 17-02-28 20:22:11.863 -08 000000042 INF: FPGA: Xmit ZDACR\n 17-02-28 20:22:11.929 -08 000000108 INF: FPGA: Recv ZDACR 60292 17-02-28 20:22:11.929 -08 000000042 INF: Z Motor: MoveAndTrigger took 250.434 ms w/comms 17-02-28 20:22:11.929 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:22:11.929 -08 000000042 INF: Z Motor: MoveAbsStepped took 250.6435 ms 17-02-28 20:22:11.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-02-28 20:22:11.930 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm. 17-02-28 20:22:11.939 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-02-28 20:22:11.939 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:22:11.939 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:22:11.939 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format 17-02-28 20:22:11.939 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n 17-02-28 20:22:11.988 -08 000000035 INF: FPGA: Recv ZSTEP 17-02-28 20:22:12.008 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-02-28 20:22:12.009 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm. 17-02-28 20:22:12.017 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-02-28 20:22:12.017 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:22:12.017 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:22:12.020 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:12.020 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Populating image tags=================== 17-02-28 20:22:12.020 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:12.020 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = B_1 17-02-28 20:22:12.021 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:12.021 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:12.026 -08 000000073 INF: ===================Move X,Y=================== 17-02-28 20:22:12.026 -08 000000086 INF: ===================MoveEmissionFilters=================== 17-02-28 20:22:12.027 -08 000000073 INF: ===================Move X,Y, Parallel=================== 17-02-28 20:22:12.028 -08 000000101 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:22:12.028 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:22:12.028 -08 000000085 INF: ===================Move X Motor without settling=================== 17-02-28 20:22:12.028 -08 000000085 INF: X Motor: Xmit PR VM\n 17-02-28 20:22:12.029 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:22:12.029 -08 000000101 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:22:12.030 -08 000000075 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:22:12.030 -08 000000087 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-02-28 20:22:12.030 -08 000000046 INF: ===================Move Y Motor without settling=================== 17-02-28 20:22:12.030 -08 000000037 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-02-28 20:22:12.030 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:22:12.030 -08 000000087 INF: ====================================== 17-02-28 20:22:12.030 -08 000000075 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:22:12.030 -08 000000104 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-02-28 20:22:12.031 -08 000000037 INF: ====================================== 17-02-28 20:22:12.031 -08 000000104 INF: ====================================== 17-02-28 20:22:12.031 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:22:12.031 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:22:12.032 -08 000000069 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-02-28 20:22:12.032 -08 000000069 INF: Emission Filter 12: Remaining IntoPath 17-02-28 20:22:12.032 -08 000000069 INF: ====================================== 17-02-28 20:22:12.032 -08 000000037 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-02-28 20:22:12.033 -08 000000046 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9061 mm 17-02-28 20:22:12.033 -08 000000010 INF: ====================================== 17-02-28 20:22:12.033 -08 000000046 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:22:12.033 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:12.034 -08 000000037 INF: ====================================== 17-02-28 20:22:12.034 -08 000000105 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-02-28 20:22:12.034 -08 000000036 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-02-28 20:22:12.034 -08 000000036 INF: ====================================== 17-02-28 20:22:12.034 -08 000000105 INF: ====================================== 17-02-28 20:22:12.035 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:22:12.036 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-02-28 20:22:12.037 -08 000000087 INF: ====================================== 17-02-28 20:22:12.037 -08 000000101 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:22:12.037 -08 000000047 INF: ====================================== 17-02-28 20:22:12.038 -08 000000075 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:22:12.039 -08 000000101 INF: ====================================== 17-02-28 20:22:12.039 -08 000000075 INF: ====================================== 17-02-28 20:22:12.041 -08 000000086 INF: ====================================== 17-02-28 20:22:12.056 -08 000000085 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-02-28 20:22:12.056 -08 000000085 INF: X Motor: Xmit PR VI\n 17-02-28 20:22:12.056 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:12.116 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:12.117 -08 000000085 INF: X Motor: Recv PR VI\r\n410\r\n> 17-02-28 20:22:12.117 -08 000000085 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-02-28 20:22:12.117 -08 000000046 INF: Y Motor: Recv ok\r 17-02-28 20:22:12.117 -08 000000046 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:22:12.117 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:12.117 -08 000000085 INF: X Motor: Moving to 71.9506 mm @15.000 mm/sec, started at 69.6982 mm 17-02-28 20:22:12.117 -08 000000085 INF: X Motor: Xmit MA 5305\n 17-02-28 20:22:12.179 -08 000000046 INF: Y Motor: Recv ok\r 17-02-28 20:22:12.179 -08 000000085 INF: X Motor: Recv MA 5305\r\n> 17-02-28 20:22:12.179 -08 000000046 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:12.179 -08 000000085 INF: X Motor: WaitUntilStopped 60150 17-02-28 20:22:12.241 -08 000000046 INF: Y Motor: Recv v 0\r 17-02-28 20:22:12.241 -08 000000046 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:12.241 -08 000000046 INF: Y Motor: Set target position to 5953351 encoder counts 17-02-28 20:22:12.241 -08 000000046 INF: Y Motor: Xmit s r0xca 5953351\r 17-02-28 20:22:12.302 -08 000000046 INF: Y Motor: Recv ok\r 17-02-28 20:22:12.302 -08 000000046 INF: Y Motor: Start the move command 17-02-28 20:22:12.302 -08 000000046 INF: Y Motor: Xmit t 1\r 17-02-28 20:22:12.366 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:12.367 -08 000000046 INF: Y Motor: Recv ok\r 17-02-28 20:22:12.367 -08 000000046 INF: Y Motor: WaitUntilStopped 61985 17-02-28 20:22:12.367 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:12.426 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:12.491 -08 000000046 INF: Y Motor: Unshifted Position: 1073438 17-02-28 20:22:12.541 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:12.665 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:12.676 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:12.739 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:12.802 -08 000000046 INF: Y Motor: Unshifted Position: 1783111 17-02-28 20:22:12.802 -08 000000085 INF: X Motor: Xmit PR ER\n 17-02-28 20:22:12.852 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:12.865 -08 000000085 INF: X Motor: Recv PR ER\r\n0\r\n> 17-02-28 20:22:12.865 -08 000000085 INF: X Motor: Moved to 71.9517 after 686 ms 17-02-28 20:22:12.865 -08 000000085 INF: ====================================== 17-02-28 20:22:12.977 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:12.989 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:13.052 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:13.115 -08 000000046 INF: Y Motor: Unshifted Position: 2565635 17-02-28 20:22:13.165 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:13.288 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:13.302 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:13.363 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:13.425 -08 000000046 INF: Y Motor: Unshifted Position: 3343906 17-02-28 20:22:13.475 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:13.602 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:13.613 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:13.675 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:13.738 -08 000000046 INF: Y Motor: Unshifted Position: 4123978 17-02-28 20:22:13.788 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:13.914 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:13.925 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:13.987 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:14.049 -08 000000046 INF: Y Motor: Unshifted Position: 4904758 17-02-28 20:22:14.099 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:14.224 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:14.237 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:14.300 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:14.363 -08 000000046 INF: Y Motor: Unshifted Position: 5685313 17-02-28 20:22:14.413 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:14.538 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:14.550 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:14.612 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:14.674 -08 000000046 INF: Y Motor: Unshifted Position: 5953352 17-02-28 20:22:14.674 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:22:14.674 -08 000000046 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:14.739 -08 000000046 INF: Y Motor: Recv v 0\r 17-02-28 20:22:14.739 -08 000000046 INF: Y Motor: Moved to 64.5335 after 2372 ms 17-02-28 20:22:14.739 -08 000000046 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:22:14.813 -08 000000046 INF: Y Motor: Recv v 4096\r 17-02-28 20:22:14.813 -08 000000046 INF: Y Motor: Status After move finished OK: 17-02-28 20:22:14.813 -08 000000046 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:14.861 -08 000000046 INF: Y Motor: Recv v 0\r 17-02-28 20:22:14.861 -08 000000046 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:14.861 -08 000000046 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:22:14.862 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:14.924 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:14.925 -08 000000046 INF: Y Motor: Recv v 402653184\r 17-02-28 20:22:14.925 -08 000000046 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-02-28 20:22:14.925 -08 000000046 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:22:14.925 -08 000000046 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:22:14.988 -08 000000046 INF: Y Motor: Recv v 0\r 17-02-28 20:22:14.988 -08 000000046 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:22:14.988 -08 000000046 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:22:14.988 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:15.051 -08 000000046 INF: Y Motor: Recv ok\r 17-02-28 20:22:15.051 -08 000000046 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:22:15.051 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:15.110 -08 000000046 INF: Y Motor: Recv ok\r 17-02-28 20:22:15.110 -08 000000046 INF: ====================================== 17-02-28 20:22:15.111 -08 000000073 INF: ===================Move X,Y=================== 17-02-28 20:22:15.113 -08 000000073 INF: ====================================== 17-02-28 20:22:15.115 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:15.116 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:15.117 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec 17-02-28 20:22:15.117 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r 17-02-28 20:22:15.174 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:22:15.174 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:15.174 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n 17-02-28 20:22:15.234 -08 000000047 INF: FPGA: Recv ZFREQCL 17-02-28 20:22:15.235 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:15.235 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions=================== 17-02-28 20:22:15.235 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:15.235 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:22:15.296 -08 000000059 INF: FPGA: Recv TDIYERD 6453352 17-02-28 20:22:15.296 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm) 17-02-28 20:22:15.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:15.298 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:15.299 -08 000000052 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:15.299 -08 000000035 INF: ===================Set YMotor gains for scans=================== 17-02-28 20:22:15.299 -08 000000052 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-02-28 20:22:15.299 -08 000000035 INF: ====================================== 17-02-28 20:22:15.300 -08 000000052 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:15.301 -08 000000052 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-02-28 20:22:15.302 -08 000000052 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-02-28 20:22:15.302 -08 000000052 INF: FPGA: Xmit TDIYPOS 6433351\n 17-02-28 20:22:15.361 -08 000000086 INF: FPGA: Recv TDIYPOS 17-02-28 20:22:15.362 -08 000000052 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-02-28 20:22:15.363 -08 000000052 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI=================== 17-02-28 20:22:15.363 -08 000000052 INF: FPGA: Xmit TDIYARM2 3072 1 1\n 17-02-28 20:22:15.424 -08 000000085 INF: FPGA: Recv TDIYARM2 17-02-28 20:22:15.424 -08 000000052 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-02-28 20:22:15.426 -08 000000052 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:15.429 -08 000000052 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-02-28 20:22:15.429 -08 000000052 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:15.431 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-02-28 20:22:15.433 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-02-28 20:22:15.434 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:22:15.485 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:15.548 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:15.798 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:15.803 -08 000000052 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-02-28 20:22:15.803 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072 17-02-28 20:22:15.804 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:22:15.820 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-02-28 20:22:15.822 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:22:15.860 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:16.110 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:16.172 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:16.203 -08 000000052 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-02-28 20:22:16.203 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072 17-02-28 20:22:16.203 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:22:16.218 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-02-28 20:22:16.220 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-02-28 20:22:16.221 -08 000000052 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:16.222 -08 000000052 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:16.223 -08 000000052 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-02-28 20:22:16.223 -08 000000052 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:16.225 -08 000000052 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-02-28 20:22:16.225 -08 000000052 INF: Z Motor: Entering ArmAbsStepped 17-02-28 20:22:16.225 -08 000000052 INF: Z Motor: Arming to move to -0.0100 mm 17-02-28 20:22:16.225 -08 000000052 INF: FPGA: Xmit ZYT 0 2\n 17-02-28 20:22:16.298 -08 000000059 INF: FPGA: Recv ZYT 17-02-28 20:22:16.298 -08 000000052 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines) 17-02-28 20:22:16.298 -08 000000052 INF: FPGA: Xmit ZARM 2621\n 17-02-28 20:22:16.357 -08 000000038 INF: FPGA: Recv ZARM 17-02-28 20:22:16.357 -08 000000052 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 58.7687 ms 17-02-28 20:22:16.357 -08 000000052 INF: Z Motor: ArmAbsStepped took 130.8128 ms 17-02-28 20:22:16.357 -08 000000052 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:16.359 -08 000000052 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:16.360 -08 000000052 INF: ====================================== 17-02-28 20:22:16.361 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:16.362 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:16.363 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:16.363 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:16.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:16.365 -08 000000085 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-02-28 20:22:16.365 -08 000000050 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-02-28 20:22:16.365 -08 000000085 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-02-28 20:22:16.365 -08 000000085 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-02-28 20:22:16.365 -08 000000085 INF: Excitation Filter 2: Moving -107 steps 17-02-28 20:22:16.365 -08 000000085 INF: FPGA: Xmit EX2MV -107\n 17-02-28 20:22:16.365 -08 000000050 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-02-28 20:22:16.366 -08 000000050 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-02-28 20:22:16.366 -08 000000050 INF: Excitation Filter 1: Moving -107 steps 17-02-28 20:22:16.367 -08 000000050 INF: FPGA: Xmit EX1MV -107\n 17-02-28 20:22:16.423 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:16.485 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:16.733 -08 000000037 INF: FPGA: Recv EX2MV 17-02-28 20:22:16.733 -08 000000037 INF: FPGA: Recv EX1MV 17-02-28 20:22:16.733 -08 000000050 INF: Excitation Filter 1: Moved -107 steps in 367.7279 ms 17-02-28 20:22:16.733 -08 000000085 INF: Excitation Filter 2: Moved -107 steps in 367.9172 ms 17-02-28 20:22:16.734 -08 000000085 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.1449 ms 17-02-28 20:22:16.734 -08 000000085 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.3244 ms 17-02-28 20:22:16.734 -08 000000050 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.9092 ms 17-02-28 20:22:16.734 -08 000000050 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.2506 ms 17-02-28 20:22:16.734 -08 000000085 INF: ====================================== 17-02-28 20:22:16.734 -08 000000050 INF: ====================================== 17-02-28 20:22:16.735 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:16.735 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:16.737 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:16.737 -08 000000105 INF: ===================Serial=================== 17-02-28 20:22:16.738 -08 000000086 INF: ===================Camera TDI=================== 17-02-28 20:22:16.738 -08 000000108 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:16.738 -08 000000105 INF: ===================Serial, FPGA Z Wait=================== 17-02-28 20:22:16.738 -08 000000099 INF: ===================Move Y Motor without settling=================== 17-02-28 20:22:16.738 -08 000000105 INF: FPGA: Xmit ZWAIT\n 17-02-28 20:22:16.738 -08 000000086 INF: ===================Camera TDI, Parallel=================== 17-02-28 20:22:16.738 -08 000000099 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm 17-02-28 20:22:16.739 -08 000000099 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:22:16.739 -08 000000099 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:16.739 -08 000000108 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-02-28 20:22:16.740 -08 000000077 INF: ===================Camera TDI=================== 17-02-28 20:22:16.740 -08 000000033 INF: ===================Camera TDI=================== 17-02-28 20:22:16.741 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:16.741 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:16.742 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:16.742 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:16.743 -08 000000108 INF: FPGA: Xmit TDIYWAIT\n 17-02-28 20:22:16.795 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:16.797 -08 000000099 INF: Y Motor: Recv ok\r 17-02-28 20:22:16.797 -08 000000099 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:22:16.797 -08 000000099 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:16.858 -08 000000099 INF: Y Motor: Recv ok\r 17-02-28 20:22:16.858 -08 000000099 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:16.891 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:16.891 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:16.892 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:16.892 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:16.923 -08 000000099 INF: Y Motor: Recv v 0\r 17-02-28 20:22:16.923 -08 000000099 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:16.923 -08 000000099 INF: Y Motor: Set target position to 5797042 encoder counts 17-02-28 20:22:16.923 -08 000000099 INF: Y Motor: Xmit s r0xca 5797042\r 17-02-28 20:22:16.985 -08 000000099 INF: Y Motor: Recv ok\r 17-02-28 20:22:16.985 -08 000000099 INF: Y Motor: Start the move command 17-02-28 20:22:16.985 -08 000000099 INF: Y Motor: Xmit t 1\r 17-02-28 20:22:17.041 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:17.041 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:17.042 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:17.042 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:17.045 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:17.048 -08 000000099 INF: Y Motor: Recv ok\r 17-02-28 20:22:17.048 -08 000000099 INF: Y Motor: WaitUntilStopped 61042 17-02-28 20:22:17.048 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:17.107 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:17.170 -08 000000099 INF: Y Motor: Unshifted Position: 5935481 17-02-28 20:22:17.191 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:17.191 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:17.192 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:17.192 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:17.220 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:17.341 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-02-28 20:22:17.341 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-02-28 20:22:17.341 -08 000000033 INF: ===================Camera #0 Frame #1=================== 17-02-28 20:22:17.342 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-02-28 20:22:17.342 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-02-28 20:22:17.342 -08 000000077 INF: ===================Camera #2 Frame #1=================== 17-02-28 20:22:17.345 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:17.357 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:17.421 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:17.483 -08 000000099 INF: Y Motor: Unshifted Position: 5888531 17-02-28 20:22:17.494 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-02-28 20:22:17.494 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-02-28 20:22:17.494 -08 000000033 INF: ===================Camera #0 Frame #3=================== 17-02-28 20:22:17.495 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-02-28 20:22:17.495 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-02-28 20:22:17.495 -08 000000077 INF: ===================Camera #2 Frame #3=================== 17-02-28 20:22:17.533 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:17.650 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-02-28 20:22:17.650 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-02-28 20:22:17.650 -08 000000033 INF: ===================Camera #0 Frame #4=================== 17-02-28 20:22:17.651 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-02-28 20:22:17.651 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-02-28 20:22:17.651 -08 000000077 INF: ===================Camera #2 Frame #4=================== 17-02-28 20:22:17.659 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:17.671 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:17.731 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:17.796 -08 000000099 INF: Y Motor: Unshifted Position: 5841817 17-02-28 20:22:17.804 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:22:17.804 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:22:17.804 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:22:17.804 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:22:17.804 -08 000000033 INF: ===================Camera #0 Frame #5=================== 17-02-28 20:22:17.804 -08 000000077 INF: ===================Camera #2 Frame #5=================== 17-02-28 20:22:17.846 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:17.856 -08 000000046 INF: FPGA: Recv ZWAIT 17-02-28 20:22:17.856 -08 000000046 INF: FPGA: Recv TDIYWAIT 17-02-28 20:22:17.857 -08 000000108 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:17.857 -08 000000105 INF: ===================Serial=================== 17-02-28 20:22:17.858 -08 000000108 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-02-28 20:22:17.858 -08 000000105 INF: ===================Serial, Confirm position Z Motor=================== 17-02-28 20:22:17.859 -08 000000105 INF: ===================Serial=================== 17-02-28 20:22:17.859 -08 000000073 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-02-28 20:22:17.859 -08 000000089 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-02-28 20:22:17.859 -08 000000073 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-02-28 20:22:17.859 -08 000000073 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-02-28 20:22:17.859 -08 000000073 INF: Excitation Filter 1: Moving 107 steps 17-02-28 20:22:17.859 -08 000000089 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-02-28 20:22:17.859 -08 000000073 INF: FPGA: Xmit EX1MV 107\n 17-02-28 20:22:17.860 -08 000000089 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-02-28 20:22:17.860 -08 000000089 INF: Excitation Filter 2: Moving 107 steps 17-02-28 20:22:17.860 -08 000000105 INF: ====================================== 17-02-28 20:22:17.862 -08 000000089 INF: FPGA: Xmit EX2MV 107\n 17-02-28 20:22:17.958 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-02-28 20:22:17.958 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-02-28 20:22:17.958 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-02-28 20:22:17.958 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-02-28 20:22:17.958 -08 000000033 INF: ===================Camera #0 Frame #6=================== 17-02-28 20:22:17.958 -08 000000077 INF: ===================Camera #2 Frame #6=================== 17-02-28 20:22:17.962 -08 000000077 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-02-28 20:22:17.962 -08 000000033 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-02-28 20:22:17.963 -08 000000077 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:22:17.966 -08 000000033 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:22:17.970 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:17.981 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:17.987 -08 000000077 INF: Camera #2 ReleaseBuffer 17-02-28 20:22:17.987 -08 000000077 INF: ===================Camera TDI=================== 17-02-28 20:22:17.988 -08 000000077 INF: ====================================== 17-02-28 20:22:18.014 -08 000000033 INF: Camera #0 ReleaseBuffer 17-02-28 20:22:18.014 -08 000000033 INF: ===================Camera TDI=================== 17-02-28 20:22:18.015 -08 000000033 INF: ====================================== 17-02-28 20:22:18.017 -08 000000086 INF: ===================Camera TDI=================== 17-02-28 20:22:18.018 -08 000000086 INF: ====================================== 17-02-28 20:22:18.043 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:18.106 -08 000000099 INF: Y Motor: Unshifted Position: 5797061 17-02-28 20:22:18.156 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:18.230 -08 000000077 INF: FPGA: Recv EX1MV 17-02-28 20:22:18.230 -08 000000077 INF: FPGA: Recv EX2MV 17-02-28 20:22:18.230 -08 000000073 INF: Excitation Filter 1: Moved 107 steps in 370.5369 ms 17-02-28 20:22:18.230 -08 000000073 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.6757 ms 17-02-28 20:22:18.230 -08 000000073 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.776 ms 17-02-28 20:22:18.230 -08 000000089 INF: Excitation Filter 2: Moved 107 steps in 370.3909 ms 17-02-28 20:22:18.230 -08 000000089 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.8297 ms 17-02-28 20:22:18.230 -08 000000089 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.903 ms 17-02-28 20:22:18.230 -08 000000073 INF: ====================================== 17-02-28 20:22:18.231 -08 000000089 INF: ====================================== 17-02-28 20:22:18.232 -08 000000108 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:18.233 -08 000000108 INF: ====================================== 17-02-28 20:22:18.293 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:18.294 -08 000000099 INF: Y Motor: Unshifted Position: 5797041 17-02-28 20:22:18.294 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:22:18.294 -08 000000099 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:18.356 -08 000000099 INF: Y Motor: Recv v 0\r 17-02-28 20:22:18.356 -08 000000099 INF: Y Motor: Moved to 62.9704 after 1308 ms 17-02-28 20:22:18.356 -08 000000099 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:22:18.357 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:18.420 -08 000000099 INF: Y Motor: Recv v 4097\r 17-02-28 20:22:18.420 -08 000000099 INF: Y Motor: Status After move finished OK: 17-02-28 20:22:18.420 -08 000000099 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:18.482 -08 000000099 INF: Y Motor: Recv v 0\r 17-02-28 20:22:18.482 -08 000000099 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:18.482 -08 000000099 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:22:18.544 -08 000000099 INF: Y Motor: Recv v 134217728\r 17-02-28 20:22:18.544 -08 000000099 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-02-28 20:22:18.544 -08 000000099 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:22:18.544 -08 000000099 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:22:18.607 -08 000000099 INF: Y Motor: Recv v 0\r 17-02-28 20:22:18.607 -08 000000099 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:22:18.607 -08 000000099 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:22:18.607 -08 000000099 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:18.607 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:18.668 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:22:18.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-02-28 20:22:18.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-02-28 20:22:18.669 -08 000000099 INF: Y Motor: Recv ok\r 17-02-28 20:22:18.669 -08 000000018 INF: WaitCommand(5000) start 17-02-28 20:22:18.669 -08 000000099 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:22:18.669 -08 000000099 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:18.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 5 of 5 seconds left=================== 17-02-28 20:22:18.731 -08 000000099 INF: Y Motor: Recv ok\r 17-02-28 20:22:18.731 -08 000000099 INF: ====================================== 17-02-28 20:22:18.732 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:18.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:18.734 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:18.734 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-02-28 20:22:18.791 -08 000000072 INF: FPGA: Recv TDICLINES 1023 17-02-28 20:22:18.791 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:22:18.855 -08 000000023 INF: FPGA: Recv TDIYERD 6297043 17-02-28 20:22:18.856 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-02-28 20:22:18.915 -08 000000075 INF: FPGA: Recv ZADCR 2425 17-02-28 20:22:18.915 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm 17-02-28 20:22:18.915 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-02-28 20:22:18.980 -08 000000066 INF: FPGA: Recv TDIPULSES 3073 17-02-28 20:22:18.980 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072 17-02-28 20:22:18.980 -08 000000042 INF: TDIScan finished after 6971.0416 ms 17-02-28 20:22:18.980 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-02-28 20:22:18.980 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-02-28 20:22:18.981 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-02-28 20:22:19.042 -08 000000072 INF: FPGA: Recv SWOOF_RDSTAT 0 17-02-28 20:22:19.043 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:19.043 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:19.044 -08 000000073 INF: ===================Set Y Motor Motor Velocity=================== 17-02-28 20:22:19.044 -08 000000077 INF: ===================Set YMotor gains for fast moves=================== 17-02-28 20:22:19.045 -08 000000078 INF: ===================Set Z Motor Motor Velocity=================== 17-02-28 20:22:19.045 -08 000000073 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:22:19.045 -08 000000073 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:22:19.045 -08 000000077 INF: ====================================== 17-02-28 20:22:19.045 -08 000000078 INF: ====================================== 17-02-28 20:22:19.106 -08 000000073 INF: Y Motor: Recv ok\r 17-02-28 20:22:19.106 -08 000000073 INF: ====================================== 17-02-28 20:22:19.107 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:19.108 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:19.109 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(A)=================== 17-02-28 20:22:19.196 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:19.197 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(G)=================== 17-02-28 20:22:19.231 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:19.232 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(T)=================== 17-02-28 20:22:19.262 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:19.262 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(C)=================== 17-02-28 20:22:19.286 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:19.286 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-02-28 20:22:19.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-02-28 20:22:19.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, ETF: Extracting coords=================== 17-02-28 20:22:19.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-02-28 20:22:19.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point=================== 17-02-28 20:22:19.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point, Extracting metrics=================== 17-02-28 20:22:19.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-02-28 20:22:19.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 4 of 5 seconds left=================== 17-02-28 20:22:19.987 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point=================== 17-02-28 20:22:20.010 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0849248396664047Best Z position at top surface = -0.156685847550001Best Z position at top surface + compensator offset = -0.133985847550001 C:3,L:2,T 17-02-28 20:22:20.011 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.156685847550001 17-02-28 20:22:20.011 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.96071 17-02-28 20:22:20.011 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0849248396664047 17-02-28 20:22:20.011 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.61537 17-02-28 20:22:20.011 -08 000000042 INF: Z-height at LaneTopSurface is -0.156685847550001. 17-02-28 20:22:20.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-02-28 20:22:20.144 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-02-28 20:22:20.144 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n 17-02-28 20:22:20.165 -08 000000085 INF: FPGA: Recv ZSTEP 17-02-28 20:22:20.165 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1=================== 17-02-28 20:22:20.167 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:20.167 -08 000000042 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908 17-02-28 20:22:20.167 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:20.168 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:20.168 -08 000000047 INF: ===================Move Tilt Motor 1=================== 17-02-28 20:22:20.168 -08 000000077 INF: ===================Move Tilt Motor 3=================== 17-02-28 20:22:20.168 -08 000000047 INF: Tilt Motor 1: Moving to 5.0005 mm, started at 5.0020 mm, delta = -0.0015 mm 17-02-28 20:22:20.169 -08 000000047 INF: FPGA: Xmit T1RD\n 17-02-28 20:22:20.169 -08 000000077 INF: Tilt Motor 3: Moving to 5.3391 mm, started at 5.3378 mm, delta = 0.0013 mm 17-02-28 20:22:20.169 -08 000000087 INF: ===================Move Tilt Motor 2=================== 17-02-28 20:22:20.169 -08 000000087 INF: Tilt Motor 2: Moving to 5.3924 mm, started at 5.3909 mm, delta = 0.0015 mm 17-02-28 20:22:20.170 -08 000000077 INF: FPGA: Xmit T3RD\n 17-02-28 20:22:20.172 -08 000000087 INF: FPGA: Xmit T2RD\n 17-02-28 20:22:20.227 -08 000000105 INF: FPGA: Recv T1RD 19693 17-02-28 20:22:20.227 -08 000000105 INF: FPGA: Recv T3RD 21014 17-02-28 20:22:20.227 -08 000000105 INF: FPGA: Recv T2RD 21224 17-02-28 20:22:20.227 -08 000000087 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6 17-02-28 20:22:20.227 -08 000000087 INF: Tilt Motor 2: Moving to 21230 encoder counts 17-02-28 20:22:20.227 -08 000000087 INF: FPGA: Xmit T2MOVETO 21230\n 17-02-28 20:22:20.227 -08 000000047 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6 17-02-28 20:22:20.227 -08 000000047 INF: Tilt Motor 1: Moving to 19687 encoder counts 17-02-28 20:22:20.227 -08 000000077 INF: Tilt Motor 3: Encoder: at motor step 3502 + 2/6 17-02-28 20:22:20.227 -08 000000077 INF: Tilt Motor 3: Moving to 21020 encoder counts 17-02-28 20:22:20.228 -08 000000047 INF: FPGA: Xmit T1MOVETO 19687\n 17-02-28 20:22:20.230 -08 000000077 INF: FPGA: Xmit T3MOVETO 21020\n 17-02-28 20:22:20.351 -08 000000099 INF: FPGA: Recv T2MOVETO 1 17-02-28 20:22:20.351 -08 000000099 INF: FPGA: Recv T1MOVETO 1 17-02-28 20:22:20.351 -08 000000099 INF: FPGA: Recv T3MOVETO 1 17-02-28 20:22:20.351 -08 000000077 INF: Tilt Motor 3: To move from 5.338 to 5.339 (0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%) 17-02-28 20:22:20.351 -08 000000087 INF: Tilt Motor 2: To move from 5.391 to 5.392 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%) 17-02-28 20:22:20.351 -08 000000047 INF: Tilt Motor 1: To move from 5.002 to 5.000 (-0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%) 17-02-28 20:22:20.351 -08 000000077 INF: FPGA: Xmit T3RD\n 17-02-28 20:22:20.354 -08 000000087 INF: FPGA: Xmit T2RD\n 17-02-28 20:22:20.355 -08 000000047 INF: FPGA: Xmit T1RD\n 17-02-28 20:22:20.413 -08 000000037 INF: FPGA: Recv T3RD 21021 17-02-28 20:22:20.413 -08 000000037 INF: FPGA: Recv T2RD 21230 17-02-28 20:22:20.413 -08 000000037 INF: FPGA: Recv T1RD 19687 17-02-28 20:22:20.413 -08 000000087 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6 17-02-28 20:22:20.413 -08 000000087 INF: FPGA: Xmit T2RD\n 17-02-28 20:22:20.413 -08 000000077 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6 17-02-28 20:22:20.413 -08 000000047 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6 17-02-28 20:22:20.414 -08 000000077 INF: FPGA: Xmit T3RD\n 17-02-28 20:22:20.416 -08 000000047 INF: FPGA: Xmit T1RD\n 17-02-28 20:22:20.475 -08 000000078 INF: FPGA: Recv T2RD 21230 17-02-28 20:22:20.475 -08 000000078 INF: FPGA: Recv T3RD 21021 17-02-28 20:22:20.475 -08 000000078 INF: FPGA: Recv T1RD 19687 17-02-28 20:22:20.475 -08 000000047 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6 17-02-28 20:22:20.475 -08 000000087 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6 17-02-28 20:22:20.475 -08 000000047 INF: FPGA: Xmit T1RD\n 17-02-28 20:22:20.475 -08 000000077 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6 17-02-28 20:22:20.476 -08 000000087 INF: FPGA: Xmit T2RD\n 17-02-28 20:22:20.478 -08 000000077 INF: FPGA: Xmit T3RD\n 17-02-28 20:22:20.540 -08 000000086 INF: FPGA: Recv T1RD 19687 17-02-28 20:22:20.540 -08 000000086 INF: FPGA: Recv T2RD 21230 17-02-28 20:22:20.540 -08 000000086 INF: FPGA: Recv T3RD 21021 17-02-28 20:22:20.540 -08 000000077 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6 17-02-28 20:22:20.540 -08 000000087 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6 17-02-28 20:22:20.540 -08 000000077 INF: Tilt Motor 3: After move to 5.3391, error = 0.0003, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:22:20.540 -08 000000087 INF: Tilt Motor 2: After move to 5.3924, error = 0.0000, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:22:20.540 -08 000000077 INF: Tilt Motor 3: Moved to 5.3393 after 371.4132 ms 17-02-28 20:22:20.540 -08 000000087 INF: Tilt Motor 2: Moved to 5.3924 after 371.1181 ms 17-02-28 20:22:20.540 -08 000000047 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6 17-02-28 20:22:20.540 -08 000000047 INF: Tilt Motor 1: After move to 5.0005, error = 0.0000, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:22:20.540 -08 000000047 INF: Tilt Motor 1: Moved to 5.0005 after 371.839 ms 17-02-28 20:22:20.540 -08 000000077 INF: ====================================== 17-02-28 20:22:20.540 -08 000000087 INF: ====================================== 17-02-28 20:22:20.541 -08 000000047 INF: ====================================== 17-02-28 20:22:20.542 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:20.542 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:20.543 -08 000000042 INF: ETF Best Z: -0.1339858 mm (35123 DAC) 17-02-28 20:22:20.543 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:20.544 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:20.544 -08 000000042 INF: Compensator: Moving IntoPath 17-02-28 20:22:20.544 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n 17-02-28 20:22:20.956 -08 000000072 INF: FPGA: Recv MIOCOMPF 17-02-28 20:22:20.956 -08 000000042 INF: Compensator: Moved IntoPath in 412 ms 17-02-28 20:22:20.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-02-28 20:22:20.957 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:20.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 3 of 5 seconds left=================== 17-02-28 20:22:20.958 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:20.963 -08 000000042 INF: Swath 1 position calculated to be: {X=71.39664, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface 17-02-28 20:22:20.964 -08 000000042 INF: Swath 2 position calculated to be: {X=72.50464, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface 17-02-28 20:22:20.969 -08 000000042 INF: Swath 0: Converted transform from (-53.12867, 15.48577) pixels to (-0.018285, 0.005175) mm. 17-02-28 20:22:20.975 -08 000000042 INF: Swath 1: Converted transform from (-68.34594, 14.96952) pixels to (-0.02346, 0.005175) mm. 17-02-28 20:22:20.975 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308=================== 17-02-28 20:22:20.976 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308=================== 17-02-28 20:22:20.976 -08 000000042 INF: Transformed XStagePosition from 71.39664 mm to 71.3783519621938 mm. 17-02-28 20:22:20.987 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5582643555254 mm. 17-02-28 20:22:20.988 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3582643555254 mm. 17-02-28 20:22:20.988 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4490143555254 mm. 17-02-28 20:22:20.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:20.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-02-28 20:22:20.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:20.990 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = B_1 17-02-28 20:22:20.998 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:20.999 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:21.000 -08 000000089 INF: ===================MoveEmissionFilters=================== 17-02-28 20:22:21.000 -08 000000037 INF: ===================Move X,Y=================== 17-02-28 20:22:21.000 -08 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:22:21.000 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:22:21.000 -08 000000037 INF: ===================Move X,Y, Parallel=================== 17-02-28 20:22:21.000 -08 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-02-28 20:22:21.001 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:22:21.001 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:22:21.001 -08 000000023 INF: Z Motor: Entering MoveAbsStepped 17-02-28 20:22:21.001 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:22:21.001 -08 000000023 INF: Z Motor: Moving to -0.1540 mm, started at -0.0100 mm 17-02-28 20:22:21.001 -08 000000023 INF: FPGA: Xmit ZTRG 0\n 17-02-28 20:22:21.001 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:22:21.001 -08 000000077 INF: ===================Move X Motor without settling=================== 17-02-28 20:22:21.001 -08 000000058 INF: ===================Move Y Motor without settling=================== 17-02-28 20:22:21.001 -08 000000077 INF: X Motor: Xmit PR VM\n 17-02-28 20:22:21.001 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:22:21.001 -08 000000058 INF: Y Motor: Moving to 64.5583 mm @25.000 mm/sec, started at 62.9704 mm 17-02-28 20:22:21.002 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:22:21.002 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:22:21.002 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:21.002 -08 000000109 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-02-28 20:22:21.002 -08 000000039 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-02-28 20:22:21.002 -08 000000039 INF: Emission Filter 12: Remaining IntoPath 17-02-28 20:22:21.002 -08 000000059 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-02-28 20:22:21.002 -08 000000051 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-02-28 20:22:21.002 -08 000000050 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-02-28 20:22:21.002 -08 000000109 INF: ====================================== 17-02-28 20:22:21.003 -08 000000101 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-02-28 20:22:21.003 -08 000000059 INF: ====================================== 17-02-28 20:22:21.003 -08 000000050 INF: ====================================== 17-02-28 20:22:21.003 -08 000000051 INF: ====================================== 17-02-28 20:22:21.003 -08 000000039 INF: ====================================== 17-02-28 20:22:21.004 -08 000000101 INF: ====================================== 17-02-28 20:22:21.004 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:22:21.004 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:22:21.005 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:22:21.005 -08 000000085 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-02-28 20:22:21.005 -08 000000033 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-02-28 20:22:21.005 -08 000000087 INF: ====================================== 17-02-28 20:22:21.005 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:22:21.006 -08 000000033 INF: ====================================== 17-02-28 20:22:21.006 -08 000000085 INF: ====================================== 17-02-28 20:22:21.006 -08 000000086 INF: ====================================== 17-02-28 20:22:21.006 -08 000000052 INF: ====================================== 17-02-28 20:22:21.007 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:22:21.008 -08 000000030 INF: ====================================== 17-02-28 20:22:21.009 -08 000000089 INF: ====================================== 17-02-28 20:22:21.070 -08 000000072 INF: FPGA: Recv ZTRG 17-02-28 20:22:21.070 -08 000000023 INF: FPGA: Xmit ZYT 0 3\n 17-02-28 20:22:21.072 -08 000000058 INF: Y Motor: Recv ok\r 17-02-28 20:22:21.072 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:22:21.072 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:21.072 -08 000000077 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-02-28 20:22:21.072 -08 000000077 INF: X Motor: Xmit PR VI\n 17-02-28 20:22:21.132 -08 000000089 INF: FPGA: Recv ZYT 17-02-28 20:22:21.132 -08 000000023 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-02-28 20:22:21.132 -08 000000023 INF: FPGA: Xmit ZMV 40366\n 17-02-28 20:22:21.134 -08 000000077 INF: X Motor: Recv PR VI\r\n410\r\n> 17-02-28 20:22:21.134 -08 000000077 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-02-28 20:22:21.134 -08 000000058 INF: Y Motor: Recv ok\r 17-02-28 20:22:21.134 -08 000000058 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:21.134 -08 000000077 INF: X Motor: Moving to 71.3784 mm @15.000 mm/sec, started at 71.9517 mm 17-02-28 20:22:21.134 -08 000000077 INF: X Motor: Xmit MA 5070\n 17-02-28 20:22:21.193 -08 000000086 INF: FPGA: Recv @LOG Trigger Camera 17-02-28 20:22:21.193 -08 000000006 INF: FPGA: Trigger Camera 17-02-28 20:22:21.195 -08 000000058 INF: Y Motor: Recv v 0\r 17-02-28 20:22:21.195 -08 000000077 INF: X Motor: Recv MA 5070\r\n> 17-02-28 20:22:21.195 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:21.195 -08 000000077 INF: X Motor: WaitUntilStopped 60038 17-02-28 20:22:21.195 -08 000000058 INF: Y Motor: Set target position to 5955826 encoder counts 17-02-28 20:22:21.195 -08 000000058 INF: Y Motor: Xmit s r0xca 5955826\r 17-02-28 20:22:21.257 -08 000000058 INF: Y Motor: Recv ok\r 17-02-28 20:22:21.257 -08 000000058 INF: Y Motor: Start the move command 17-02-28 20:22:21.257 -08 000000058 INF: Y Motor: Xmit t 1\r 17-02-28 20:22:21.321 -08 000000059 INF: FPGA: Recv ZMV 17-02-28 20:22:21.321 -08 000000023 INF: Z Motor: MoveAndTrigger 'ZMV' command took 188.927 ms 17-02-28 20:22:21.321 -08 000000023 INF: FPGA: Xmit ZDACR\n 17-02-28 20:22:21.322 -08 000000058 INF: Y Motor: Recv ok\r 17-02-28 20:22:21.322 -08 000000058 INF: Y Motor: WaitUntilStopped 60064 17-02-28 20:22:21.322 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:21.383 -08 000000108 INF: FPGA: Recv ZDACR 40366 17-02-28 20:22:21.384 -08 000000023 INF: Z Motor: MoveAndTrigger took 382.944 ms w/comms 17-02-28 20:22:21.384 -08 000000023 INF: Z Motor: After move to -0.1540, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:22:21.384 -08 000000023 INF: Z Motor: MoveAbsStepped took 383.1204 ms 17-02-28 20:22:21.384 -08 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:22:21.386 -08 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-02-28 20:22:21.386 -08 000000036 INF: ===================Camera Arm TDI=================== 17-02-28 20:22:21.386 -08 000000104 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:21.387 -08 000000036 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:22:21.387 -08 000000104 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:21.388 -08 000000036 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:22:21.388 -08 000000104 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:22:21.389 -08 000000104 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:22:21.389 -08 000000104 INF: FPGA: Xmit ZSEL 3\n 17-02-28 20:22:21.443 -08 000000039 INF: FPGA: Recv ZSEL 17-02-28 20:22:21.443 -08 000000104 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:22:21.444 -08 000000104 INF: FPGA: Xmit TDIBB 1\n 17-02-28 20:22:21.445 -08 000000058 INF: Y Motor: Unshifted Position: 5882264 17-02-28 20:22:21.495 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:21.507 -08 000000105 INF: FPGA: Recv TDIBB 17-02-28 20:22:21.507 -08 000000104 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:22:21.508 -08 000000104 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:22:21.509 -08 000000104 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:21.510 -08 000000104 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-02-28 20:22:21.510 -08 000000104 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-02-28 20:22:21.510 -08 000000104 INF: FPGA: Xmit ZSTEP 1792263\n 17-02-28 20:22:21.569 -08 000000066 INF: FPGA: Recv ZSTEP 17-02-28 20:22:21.569 -08 000000104 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:21.571 -08 000000104 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-02-28 20:22:21.571 -08 000000104 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:21.573 -08 000000104 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-02-28 20:22:21.573 -08 000000104 INF: Z Motor: Entering ArmAbsStepped 17-02-28 20:22:21.573 -08 000000104 INF: Z Motor: Arming to move to -0.1140 mm 17-02-28 20:22:21.573 -08 000000104 INF: FPGA: Xmit ZYT 6435826 4\n 17-02-28 20:22:21.621 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:21.631 -08 000000075 INF: FPGA: Recv ZYT 17-02-28 20:22:21.631 -08 000000104 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6382264 enc / 63.823 mm / ) = 6435826 enc / 64.358 mm 17-02-28 20:22:21.631 -08 000000104 INF: FPGA: Xmit ZARM 29880\n 17-02-28 20:22:21.633 -08 000000077 INF: X Motor: Xmit PR ER\n 17-02-28 20:22:21.692 -08 000000050 INF: FPGA: Recv ZARM 17-02-28 20:22:21.692 -08 000000104 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.9615 ms 17-02-28 20:22:21.692 -08 000000104 INF: Z Motor: ArmAbsStepped took 118.9167 ms 17-02-28 20:22:21.692 -08 000000104 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:21.693 -08 000000104 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:21.694 -08 000000077 INF: X Motor: Recv PR ER\r\n0\r\n> 17-02-28 20:22:21.694 -08 000000077 INF: X Motor: Moved to 71.3779 after 499 ms 17-02-28 20:22:21.694 -08 000000077 INF: ====================================== 17-02-28 20:22:21.695 -08 000000104 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-02-28 20:22:21.695 -08 000000104 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:21.697 -08 000000104 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-02-28 20:22:21.697 -08 000000104 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:21.698 -08 000000104 INF: ====================================== 17-02-28 20:22:21.759 -08 000000058 INF: Y Motor: Unshifted Position: 5955827 17-02-28 20:22:21.759 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:22:21.759 -08 000000058 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:21.820 -08 000000058 INF: Y Motor: Recv v 0\r 17-02-28 20:22:21.820 -08 000000058 INF: Y Motor: Moved to 64.5583 after 498 ms 17-02-28 20:22:21.820 -08 000000058 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:22:21.882 -08 000000058 INF: Y Motor: Recv v 4096\r 17-02-28 20:22:21.882 -08 000000058 INF: Y Motor: Status After move finished OK: 17-02-28 20:22:21.882 -08 000000058 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:21.944 -08 000000058 INF: Y Motor: Recv v 0\r 17-02-28 20:22:21.944 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:21.944 -08 000000058 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:22:21.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-02-28 20:22:21.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 2 of 5 seconds left=================== 17-02-28 20:22:22.006 -08 000000058 INF: Y Motor: Recv v 402653184\r 17-02-28 20:22:22.006 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-02-28 20:22:22.006 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:22:22.006 -08 000000058 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:22:22.069 -08 000000058 INF: Y Motor: Recv v 0\r 17-02-28 20:22:22.069 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:22:22.069 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:22:22.069 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:22.132 -08 000000058 INF: Y Motor: Recv ok\r 17-02-28 20:22:22.132 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:22:22.132 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:22.194 -08 000000058 INF: Y Motor: Recv ok\r 17-02-28 20:22:22.194 -08 000000058 INF: ====================================== 17-02-28 20:22:22.195 -08 000000037 INF: ===================Move X,Y=================== 17-02-28 20:22:22.196 -08 000000037 INF: ====================================== 17-02-28 20:22:22.389 -08 000000036 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:22:22.389 -08 000000036 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:22:22.390 -08 000000036 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:22:22.405 -08 000000036 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:22:22.407 -08 000000036 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:22:22.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-02-28 20:22:22.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 1 of 5 seconds left=================== 17-02-28 20:22:23.464 -08 000000036 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:22:23.464 -08 000000036 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:22:23.464 -08 000000036 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:22:23.479 -08 000000036 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:22:23.481 -08 000000036 INF: ===================Camera Arm TDI=================== 17-02-28 20:22:23.482 -08 000000036 INF: ====================================== 17-02-28 20:22:23.483 -08 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:22:23.484 -08 000000023 INF: ====================================== 17-02-28 20:22:23.485 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:23.486 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:23.486 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-02-28 20:22:23.486 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-02-28 20:22:23.567 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:22:23.567 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-02-28 20:22:23.627 -08 000000069 INF: FPGA: Recv ZFREQCL 17-02-28 20:22:23.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-02-28 20:22:23.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:23.627 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:22:23.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-02-28 20:22:23.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-02-28 20:22:23.669 -08 000000018 INF: WaitCommand(5000) end 17-02-28 20:22:23.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-02-28 20:22:23.691 -08 000000089 INF: FPGA: Recv TDIYERD 6455827 17-02-28 20:22:23.691 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455827 counts (64.558 mm) 17-02-28 20:22:23.691 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:23.692 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:23.692 -08 000000023 INF: ===================TDI FPGA Arm=================== 17-02-28 20:22:23.692 -08 000000039 INF: ===================Set YMotor gains for scans=================== 17-02-28 20:22:23.693 -08 000000039 INF: ====================================== 17-02-28 20:22:23.693 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:22:23.694 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-02-28 20:22:23.694 -08 000000023 INF: FPGA: Xmit TDIYPOS 6344901\n 17-02-28 20:22:23.753 -08 000000109 INF: FPGA: Recv TDIYPOS 17-02-28 20:22:23.753 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:22:23.754 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-02-28 20:22:23.755 -08 000000023 INF: FPGA: Xmit TDIYARM3 139264 6435826 1 1\n 17-02-28 20:22:23.768 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:22:23.814 -08 000000095 INF: FPGA: Recv TDIYARM3 17-02-28 20:22:23.814 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:22:23.815 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF) 17-02-28 20:22:23.815 -08 000000018 INF: Current Position of Pump is: 11904 17-02-28 20:22:23.815 -08 000000023 INF: ===================TDI FPGA Arm=================== 17-02-28 20:22:23.816 -08 000000023 INF: ====================================== 17-02-28 20:22:23.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:23.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:23.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:23.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:23.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:23.820 -08 000000010 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-02-28 20:22:23.820 -08 000000052 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-02-28 20:22:23.820 -08 000000010 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-02-28 20:22:23.820 -08 000000010 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-02-28 20:22:23.820 -08 000000010 INF: Excitation Filter 2: Moving -107 steps 17-02-28 20:22:23.820 -08 000000052 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-02-28 20:22:23.820 -08 000000052 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-02-28 20:22:23.820 -08 000000052 INF: Excitation Filter 1: Moving -107 steps 17-02-28 20:22:23.820 -08 000000010 INF: FPGA: Xmit EX2MV -107\n 17-02-28 20:22:23.823 -08 000000052 INF: FPGA: Xmit EX1MV -107\n 17-02-28 20:22:23.915 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:22:24.004 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF) 17-02-28 20:22:24.004 -08 000000018 INF: Current Position of Pump is: 11904 17-02-28 20:22:24.004 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Dispensing port PortC=================== 17-02-28 20:22:24.104 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD11904R\r 17-02-28 20:22:24.188 -08 000000035 INF: FPGA: Recv EX2MV 17-02-28 20:22:24.188 -08 000000010 INF: Excitation Filter 2: Moved -107 steps in 367.7229 ms 17-02-28 20:22:24.188 -08 000000010 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.8298 ms 17-02-28 20:22:24.188 -08 000000010 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.8989 ms 17-02-28 20:22:24.188 -08 000000010 INF: ====================================== 17-02-28 20:22:24.189 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:24.250 -08 000000073 INF: FPGA: Recv EX1MV 17-02-28 20:22:24.250 -08 000000052 INF: Excitation Filter 1: Moved -107 steps in 429.6603 ms 17-02-28 20:22:24.250 -08 000000052 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 429.7702 ms 17-02-28 20:22:24.250 -08 000000052 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 429.8451 ms 17-02-28 20:22:24.250 -08 000000052 INF: ====================================== 17-02-28 20:22:24.251 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:24.252 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:24.253 -08 000000030 INF: ===================Camera TDI=================== 17-02-28 20:22:24.253 -08 000000085 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:24.253 -08 000000066 INF: ===================FPGA Z Wait=================== 17-02-28 20:22:24.253 -08 000000037 INF: ===================Move Y Motor without settling=================== 17-02-28 20:22:24.253 -08 000000066 INF: FPGA: Xmit ZWAIT\n 17-02-28 20:22:24.253 -08 000000037 INF: Y Motor: Moving to 14.9099 mm @6.500 mm/sec, started at 64.5583 mm 17-02-28 20:22:24.254 -08 000000037 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:22:24.254 -08 000000037 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:24.254 -08 000000030 INF: ===================Camera TDI, Parallel=================== 17-02-28 20:22:24.254 -08 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-02-28 20:22:24.255 -08 000000085 INF: FPGA: Xmit TDIYWAIT\n 17-02-28 20:22:24.255 -08 000000035 INF: ===================Camera TDI=================== 17-02-28 20:22:24.255 -08 000000089 INF: ===================Camera TDI=================== 17-02-28 20:22:24.256 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:24.256 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:24.257 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:24.257 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:24.289 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:24.315 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:24.316 -08 000000037 INF: Y Motor: Recv ok\r 17-02-28 20:22:24.316 -08 000000037 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:22:24.316 -08 000000037 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:24.378 -08 000000037 INF: Y Motor: Recv ok\r 17-02-28 20:22:24.378 -08 000000037 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:24.406 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:24.406 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:24.407 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:24.407 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:24.439 -08 000000037 INF: Y Motor: Recv v 0\r 17-02-28 20:22:24.439 -08 000000037 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:24.439 -08 000000037 INF: Y Motor: Set target position to 990993 encoder counts 17-02-28 20:22:24.439 -08 000000037 INF: Y Motor: Xmit s r0xca 990993\r 17-02-28 20:22:24.504 -08 000000037 INF: Y Motor: Recv ok\r 17-02-28 20:22:24.504 -08 000000037 INF: Y Motor: Start the move command 17-02-28 20:22:24.504 -08 000000037 INF: Y Motor: Xmit t 1\r 17-02-28 20:22:24.556 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:24.556 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:24.557 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:24.557 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:24.565 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:24.568 -08 000000037 INF: Y Motor: Recv ok\r 17-02-28 20:22:24.568 -08 000000037 INF: Y Motor: WaitUntilStopped 67638 17-02-28 20:22:24.568 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:24.625 -08 000000077 INF: FPGA: Recv ZWAIT 17-02-28 20:22:24.625 -08 000000066 INF: ====================================== 17-02-28 20:22:24.626 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:24.691 -08 000000037 INF: Y Motor: Unshifted Position: 5894625 17-02-28 20:22:24.706 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-02-28 20:22:24.706 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-02-28 20:22:24.706 -08 000000089 INF: ===================Camera #2 Frame #4=================== 17-02-28 20:22:24.707 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-02-28 20:22:24.707 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-02-28 20:22:24.707 -08 000000035 INF: ===================Camera #0 Frame #4=================== 17-02-28 20:22:24.741 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:24.867 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:24.870 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10. 17-02-28 20:22:24.870 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10 17-02-28 20:22:24.870 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10. 17-02-28 20:22:24.870 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10 17-02-28 20:22:24.870 -08 000000035 INF: ===================Camera #0 Frame #10=================== 17-02-28 20:22:24.870 -08 000000089 INF: ===================Camera #2 Frame #10=================== 17-02-28 20:22:24.876 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:24.940 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:25.001 -08 000000037 INF: Y Motor: Unshifted Position: 5690312 17-02-28 20:22:25.040 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-02-28 20:22:25.040 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-02-28 20:22:25.040 -08 000000035 INF: ===================Camera #0 Frame #17=================== 17-02-28 20:22:25.041 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-02-28 20:22:25.041 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-02-28 20:22:25.041 -08 000000089 INF: ===================Camera #2 Frame #17=================== 17-02-28 20:22:25.051 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:25.177 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:25.190 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:25.213 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-02-28 20:22:25.213 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-02-28 20:22:25.213 -08 000000035 INF: ===================Camera #0 Frame #23=================== 17-02-28 20:22:25.215 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-02-28 20:22:25.215 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-02-28 20:22:25.215 -08 000000089 INF: ===================Camera #2 Frame #23=================== 17-02-28 20:22:25.252 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:25.315 -08 000000037 INF: Y Motor: Unshifted Position: 5487512 17-02-28 20:22:25.365 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:25.381 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-02-28 20:22:25.381 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-02-28 20:22:25.381 -08 000000035 INF: ===================Camera #0 Frame #29=================== 17-02-28 20:22:25.384 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-02-28 20:22:25.384 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-02-28 20:22:25.384 -08 000000089 INF: ===================Camera #2 Frame #29=================== 17-02-28 20:22:25.489 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:25.502 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:25.549 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35. 17-02-28 20:22:25.549 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35 17-02-28 20:22:25.549 -08 000000035 INF: ===================Camera #0 Frame #35=================== 17-02-28 20:22:25.553 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36. 17-02-28 20:22:25.553 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36 17-02-28 20:22:25.553 -08 000000089 INF: ===================Camera #2 Frame #36=================== 17-02-28 20:22:25.563 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:25.628 -08 000000037 INF: Y Motor: Unshifted Position: 5285144 17-02-28 20:22:25.678 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:25.717 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-02-28 20:22:25.717 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-02-28 20:22:25.717 -08 000000035 INF: ===================Camera #0 Frame #42=================== 17-02-28 20:22:25.726 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-02-28 20:22:25.726 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-02-28 20:22:25.726 -08 000000089 INF: ===================Camera #2 Frame #42=================== 17-02-28 20:22:25.802 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:25.813 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:25.874 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:25.888 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-02-28 20:22:25.888 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-02-28 20:22:25.888 -08 000000035 INF: ===================Camera #0 Frame #48=================== 17-02-28 20:22:25.895 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-02-28 20:22:25.895 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-02-28 20:22:25.895 -08 000000089 INF: ===================Camera #2 Frame #48=================== 17-02-28 20:22:25.937 -08 000000037 INF: Y Motor: Unshifted Position: 5082987 17-02-28 20:22:25.987 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:26.056 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54. 17-02-28 20:22:26.056 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54 17-02-28 20:22:26.056 -08 000000035 INF: ===================Camera #0 Frame #54=================== 17-02-28 20:22:26.064 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54. 17-02-28 20:22:26.064 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54 17-02-28 20:22:26.064 -08 000000089 INF: ===================Camera #2 Frame #54=================== 17-02-28 20:22:26.114 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:26.124 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:26.186 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:22:26.186 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)=================== 17-02-28 20:22:26.186 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-02-28 20:22:26.224 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60. 17-02-28 20:22:26.224 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60 17-02-28 20:22:26.224 -08 000000035 INF: ===================Camera #0 Frame #60=================== 17-02-28 20:22:26.234 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-02-28 20:22:26.234 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-02-28 20:22:26.234 -08 000000089 INF: ===================Camera #2 Frame #61=================== 17-02-28 20:22:26.249 -08 000000037 INF: Y Motor: Unshifted Position: 4879974 17-02-28 20:22:26.300 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:26.394 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-02-28 20:22:26.394 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-02-28 20:22:26.394 -08 000000035 INF: ===================Camera #0 Frame #67=================== 17-02-28 20:22:26.408 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-02-28 20:22:26.408 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-02-28 20:22:26.408 -08 000000089 INF: ===================Camera #2 Frame #67=================== 17-02-28 20:22:26.428 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:26.564 -08 000000037 INF: Y Motor: Unshifted Position: 4676521 17-02-28 20:22:26.567 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-02-28 20:22:26.567 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-02-28 20:22:26.567 -08 000000035 INF: ===================Camera #0 Frame #73=================== 17-02-28 20:22:26.579 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-02-28 20:22:26.579 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-02-28 20:22:26.579 -08 000000089 INF: ===================Camera #2 Frame #73=================== 17-02-28 20:22:26.614 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:26.687 -08 000000046 INF: RunCopyService queue size at 2/28/2017 8:22:26 PM is 2 17-02-28 20:22:26.737 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79. 17-02-28 20:22:26.737 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79 17-02-28 20:22:26.737 -08 000000035 INF: ===================Camera #0 Frame #79=================== 17-02-28 20:22:26.739 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:26.750 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80. 17-02-28 20:22:26.750 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80 17-02-28 20:22:26.759 -08 000000089 INF: ===================Camera #2 Frame #80=================== 17-02-28 20:22:26.875 -08 000000037 INF: Y Motor: Unshifted Position: 4473492 17-02-28 20:22:26.906 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85. 17-02-28 20:22:26.906 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85 17-02-28 20:22:26.906 -08 000000035 INF: ===================Camera #0 Frame #85=================== 17-02-28 20:22:26.925 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:26.933 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-02-28 20:22:26.933 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-02-28 20:22:26.933 -08 000000089 INF: ===================Camera #2 Frame #86=================== 17-02-28 20:22:27.051 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:27.076 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-02-28 20:22:27.076 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-02-28 20:22:27.076 -08 000000035 INF: ===================Camera #0 Frame #92=================== 17-02-28 20:22:27.104 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93. 17-02-28 20:22:27.104 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93 17-02-28 20:22:27.104 -08 000000089 INF: ===================Camera #2 Frame #93=================== 17-02-28 20:22:27.187 -08 000000037 INF: Y Motor: Unshifted Position: 4270697 17-02-28 20:22:27.237 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:27.249 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98. 17-02-28 20:22:27.249 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98 17-02-28 20:22:27.249 -08 000000035 INF: ===================Camera #0 Frame #98=================== 17-02-28 20:22:27.278 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99. 17-02-28 20:22:27.278 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99 17-02-28 20:22:27.278 -08 000000089 INF: ===================Camera #2 Frame #99=================== 17-02-28 20:22:27.287 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 17-02-28 20:22:27.363 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:27.374 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:27.419 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104. 17-02-28 20:22:27.419 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104 17-02-28 20:22:27.419 -08 000000035 INF: ===================Camera #0 Frame #104=================== 17-02-28 20:22:27.449 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105. 17-02-28 20:22:27.449 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105 17-02-28 20:22:27.449 -08 000000089 INF: ===================Camera #2 Frame #105=================== 17-02-28 20:22:27.474 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:27.498 -08 000000037 INF: Y Motor: Unshifted Position: 4068328 17-02-28 20:22:27.548 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:27.561 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:27.589 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-02-28 20:22:27.589 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-02-28 20:22:27.589 -08 000000035 INF: ===================Camera #0 Frame #111=================== 17-02-28 20:22:27.620 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112. 17-02-28 20:22:27.620 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112 17-02-28 20:22:27.620 -08 000000089 INF: ===================Camera #2 Frame #112=================== 17-02-28 20:22:27.674 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:27.762 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-02-28 20:22:27.762 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-02-28 20:22:27.762 -08 000000035 INF: ===================Camera #0 Frame #117=================== 17-02-28 20:22:27.794 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118. 17-02-28 20:22:27.794 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118 17-02-28 20:22:27.794 -08 000000089 INF: ===================Camera #2 Frame #118=================== 17-02-28 20:22:27.811 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:27.812 -08 000000037 INF: Y Motor: Unshifted Position: 3865960 17-02-28 20:22:27.862 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:27.874 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:22:27.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:27.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 17-02-28 20:22:27.931 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123. 17-02-28 20:22:27.931 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123 17-02-28 20:22:27.931 -08 000000035 INF: ===================Camera #0 Frame #123=================== 17-02-28 20:22:27.963 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124. 17-02-28 20:22:27.963 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124 17-02-28 20:22:27.963 -08 000000089 INF: ===================Camera #2 Frame #124=================== 17-02-28 20:22:27.985 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:28.099 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129. 17-02-28 20:22:28.099 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129 17-02-28 20:22:28.099 -08 000000035 INF: ===================Camera #0 Frame #129=================== 17-02-28 20:22:28.124 -08 000000037 INF: Y Motor: Unshifted Position: 3663156 17-02-28 20:22:28.132 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131. 17-02-28 20:22:28.132 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131 17-02-28 20:22:28.132 -08 000000089 INF: ===================Camera #2 Frame #131=================== 17-02-28 20:22:28.174 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:28.268 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-02-28 20:22:28.268 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-02-28 20:22:28.268 -08 000000035 INF: ===================Camera #0 Frame #136=================== 17-02-28 20:22:28.299 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:28.304 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137. 17-02-28 20:22:28.304 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137 17-02-28 20:22:28.304 -08 000000089 INF: ===================Camera #2 Frame #137=================== 17-02-28 20:22:28.435 -08 000000037 INF: Y Motor: Unshifted Position: 3459066 17-02-28 20:22:28.440 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142. 17-02-28 20:22:28.440 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142 17-02-28 20:22:28.440 -08 000000035 INF: ===================Camera #0 Frame #142=================== 17-02-28 20:22:28.475 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143. 17-02-28 20:22:28.475 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143 17-02-28 20:22:28.475 -08 000000089 INF: ===================Camera #2 Frame #143=================== 17-02-28 20:22:28.485 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:28.610 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148. 17-02-28 20:22:28.610 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148 17-02-28 20:22:28.610 -08 000000035 INF: ===================Camera #0 Frame #148=================== 17-02-28 20:22:28.611 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:28.621 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:28.621 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:28.622 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:28.622 -08 000000018 INF: WaitCommand(10000) start 17-02-28 20:22:28.622 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 10 of 10 seconds left=================== 17-02-28 20:22:28.645 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149. 17-02-28 20:22:28.645 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149 17-02-28 20:22:28.645 -08 000000089 INF: ===================Camera #2 Frame #149=================== 17-02-28 20:22:28.748 -08 000000037 INF: Y Motor: Unshifted Position: 3256697 17-02-28 20:22:28.779 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154. 17-02-28 20:22:28.779 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154 17-02-28 20:22:28.779 -08 000000035 INF: ===================Camera #0 Frame #154=================== 17-02-28 20:22:28.798 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:28.816 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156. 17-02-28 20:22:28.816 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156 17-02-28 20:22:28.816 -08 000000089 INF: ===================Camera #2 Frame #156=================== 17-02-28 20:22:28.922 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:28.949 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161. 17-02-28 20:22:28.949 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161 17-02-28 20:22:28.949 -08 000000035 INF: ===================Camera #0 Frame #161=================== 17-02-28 20:22:28.990 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162. 17-02-28 20:22:28.990 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162 17-02-28 20:22:28.990 -08 000000089 INF: ===================Camera #2 Frame #162=================== 17-02-28 20:22:29.058 -08 000000037 INF: Y Motor: Unshifted Position: 3054334 17-02-28 20:22:29.108 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:29.122 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167. 17-02-28 20:22:29.122 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167 17-02-28 20:22:29.122 -08 000000035 INF: ===================Camera #0 Frame #167=================== 17-02-28 20:22:29.161 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-02-28 20:22:29.161 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-02-28 20:22:29.161 -08 000000089 INF: ===================Camera #2 Frame #168=================== 17-02-28 20:22:29.234 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:29.292 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173. 17-02-28 20:22:29.292 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173 17-02-28 20:22:29.292 -08 000000035 INF: ===================Camera #0 Frame #173=================== 17-02-28 20:22:29.332 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175. 17-02-28 20:22:29.332 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175 17-02-28 20:22:29.332 -08 000000089 INF: ===================Camera #2 Frame #175=================== 17-02-28 20:22:29.372 -08 000000037 INF: Y Motor: Unshifted Position: 2851539 17-02-28 20:22:29.422 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:29.462 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179. 17-02-28 20:22:29.462 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179 17-02-28 20:22:29.462 -08 000000035 INF: ===================Camera #0 Frame #179=================== 17-02-28 20:22:29.507 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181. 17-02-28 20:22:29.507 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181 17-02-28 20:22:29.507 -08 000000089 INF: ===================Camera #2 Frame #181=================== 17-02-28 20:22:29.545 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:29.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:29.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 9 of 10 seconds left=================== 17-02-28 20:22:29.632 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186. 17-02-28 20:22:29.632 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186 17-02-28 20:22:29.632 -08 000000035 INF: ===================Camera #0 Frame #186=================== 17-02-28 20:22:29.678 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-02-28 20:22:29.678 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-02-28 20:22:29.678 -08 000000089 INF: ===================Camera #2 Frame #187=================== 17-02-28 20:22:29.683 -08 000000037 INF: Y Motor: Unshifted Position: 2647439 17-02-28 20:22:29.733 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:29.805 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192. 17-02-28 20:22:29.805 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192 17-02-28 20:22:29.805 -08 000000035 INF: ===================Camera #0 Frame #192=================== 17-02-28 20:22:29.848 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194. 17-02-28 20:22:29.848 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194 17-02-28 20:22:29.848 -08 000000089 INF: ===================Camera #2 Frame #194=================== 17-02-28 20:22:29.856 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:29.975 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198. 17-02-28 20:22:29.975 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198 17-02-28 20:22:29.975 -08 000000035 INF: ===================Camera #0 Frame #198=================== 17-02-28 20:22:29.994 -08 000000037 INF: Y Motor: Unshifted Position: 2445076 17-02-28 20:22:30.023 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200. 17-02-28 20:22:30.023 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200 17-02-28 20:22:30.023 -08 000000089 INF: ===================Camera #2 Frame #200=================== 17-02-28 20:22:30.044 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:30.145 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205. 17-02-28 20:22:30.145 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205 17-02-28 20:22:30.145 -08 000000035 INF: ===================Camera #0 Frame #205=================== 17-02-28 20:22:30.173 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:30.194 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-02-28 20:22:30.194 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-02-28 20:22:30.194 -08 000000089 INF: ===================Camera #2 Frame #206=================== 17-02-28 20:22:30.308 -08 000000037 INF: Y Motor: Unshifted Position: 2240976 17-02-28 20:22:30.318 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211. 17-02-28 20:22:30.318 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211 17-02-28 20:22:30.318 -08 000000035 INF: ===================Camera #0 Frame #211=================== 17-02-28 20:22:30.358 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:30.365 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213. 17-02-28 20:22:30.365 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213 17-02-28 20:22:30.365 -08 000000089 INF: ===================Camera #2 Frame #213=================== 17-02-28 20:22:30.482 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:30.488 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217. 17-02-28 20:22:30.488 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217 17-02-28 20:22:30.488 -08 000000035 INF: ===================Camera #0 Frame #217=================== 17-02-28 20:22:30.539 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219. 17-02-28 20:22:30.539 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219 17-02-28 20:22:30.539 -08 000000089 INF: ===================Camera #2 Frame #219=================== 17-02-28 20:22:30.620 -08 000000037 INF: Y Motor: Unshifted Position: 2039911 17-02-28 20:22:30.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:30.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 8 of 10 seconds left=================== 17-02-28 20:22:30.658 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224. 17-02-28 20:22:30.658 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224 17-02-28 20:22:30.658 -08 000000035 INF: ===================Camera #0 Frame #224=================== 17-02-28 20:22:30.670 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:30.710 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225. 17-02-28 20:22:30.710 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225 17-02-28 20:22:30.710 -08 000000089 INF: ===================Camera #2 Frame #225=================== 17-02-28 20:22:30.795 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:30.831 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230. 17-02-28 20:22:30.831 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230 17-02-28 20:22:30.831 -08 000000035 INF: ===================Camera #0 Frame #230=================== 17-02-28 20:22:30.881 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232. 17-02-28 20:22:30.881 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232 17-02-28 20:22:30.881 -08 000000089 INF: ===================Camera #2 Frame #232=================== 17-02-28 20:22:30.931 -08 000000037 INF: Y Motor: Unshifted Position: 1835808 17-02-28 20:22:30.981 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:31.001 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236. 17-02-28 20:22:31.001 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236 17-02-28 20:22:31.001 -08 000000035 INF: ===================Camera #0 Frame #236=================== 17-02-28 20:22:31.055 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238. 17-02-28 20:22:31.055 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238 17-02-28 20:22:31.055 -08 000000089 INF: ===================Camera #2 Frame #238=================== 17-02-28 20:22:31.104 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:31.171 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242. 17-02-28 20:22:31.171 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242 17-02-28 20:22:31.171 -08 000000035 INF: ===================Camera #0 Frame #242=================== 17-02-28 20:22:31.226 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244. 17-02-28 20:22:31.226 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244 17-02-28 20:22:31.226 -08 000000089 INF: ===================Camera #2 Frame #244=================== 17-02-28 20:22:31.243 -08 000000037 INF: Y Motor: Unshifted Position: 1632787 17-02-28 20:22:31.293 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:31.341 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249. 17-02-28 20:22:31.341 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249 17-02-28 20:22:31.341 -08 000000035 INF: ===================Camera #0 Frame #249=================== 17-02-28 20:22:31.397 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251. 17-02-28 20:22:31.397 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251 17-02-28 20:22:31.397 -08 000000089 INF: ===================Camera #2 Frame #251=================== 17-02-28 20:22:31.416 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:31.514 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255. 17-02-28 20:22:31.514 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255 17-02-28 20:22:31.514 -08 000000035 INF: ===================Camera #0 Frame #255=================== 17-02-28 20:22:31.554 -08 000000037 INF: Y Motor: Unshifted Position: 1429336 17-02-28 20:22:31.571 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257. 17-02-28 20:22:31.571 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257 17-02-28 20:22:31.571 -08 000000089 INF: ===================Camera #2 Frame #257=================== 17-02-28 20:22:31.604 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:31.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:31.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 7 of 10 seconds left=================== 17-02-28 20:22:31.684 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261. 17-02-28 20:22:31.684 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261 17-02-28 20:22:31.684 -08 000000035 INF: ===================Camera #0 Frame #261=================== 17-02-28 20:22:31.730 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:31.742 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263. 17-02-28 20:22:31.742 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263 17-02-28 20:22:31.742 -08 000000089 INF: ===================Camera #2 Frame #263=================== 17-02-28 20:22:31.854 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268. 17-02-28 20:22:31.854 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268 17-02-28 20:22:31.854 -08 000000035 INF: ===================Camera #0 Frame #268=================== 17-02-28 20:22:31.868 -08 000000037 INF: Y Motor: Unshifted Position: 1228258 17-02-28 20:22:31.913 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270. 17-02-28 20:22:31.913 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270 17-02-28 20:22:31.913 -08 000000089 INF: ===================Camera #2 Frame #270=================== 17-02-28 20:22:31.918 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:31.989 -08 000000066 INF: FPGA: Recv TDIYWAIT 17-02-28 20:22:31.989 -08 000000085 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:31.991 -08 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-02-28 20:22:31.992 -08 000000077 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-02-28 20:22:31.992 -08 000000038 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-02-28 20:22:31.992 -08 000000077 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-02-28 20:22:31.992 -08 000000077 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-02-28 20:22:31.992 -08 000000077 INF: Excitation Filter 1: Moving 107 steps 17-02-28 20:22:31.992 -08 000000077 INF: FPGA: Xmit EX1MV 107\n 17-02-28 20:22:31.992 -08 000000038 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-02-28 20:22:31.992 -08 000000038 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-02-28 20:22:31.992 -08 000000038 INF: Excitation Filter 2: Moving 107 steps 17-02-28 20:22:31.993 -08 000000038 INF: FPGA: Xmit EX2MV 107\n 17-02-28 20:22:32.027 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:22:32.027 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:22:32.027 -08 000000035 INF: ===================Camera #0 Frame #272=================== 17-02-28 20:22:32.040 -08 000000035 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:22:32.041 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:32.041 -08 000000035 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:22:32.179 -08 000000037 INF: Y Motor: Unshifted Position: 1024598 17-02-28 20:22:32.204 -08 000000035 INF: Camera #0 ReleaseBuffer 17-02-28 20:22:32.204 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:22:32.204 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:22:32.204 -08 000000089 INF: ===================Camera #2 Frame #272=================== 17-02-28 20:22:32.204 -08 000000035 INF: ===================Camera TDI=================== 17-02-28 20:22:32.211 -08 000000089 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:22:32.212 -08 000000089 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:22:32.229 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:32.235 -08 000000035 INF: ====================================== 17-02-28 20:22:32.364 -08 000000069 INF: FPGA: Recv EX1MV 17-02-28 20:22:32.364 -08 000000069 INF: FPGA: Recv EX2MV 17-02-28 20:22:32.364 -08 000000077 INF: Excitation Filter 1: Moved 107 steps in 371.9827 ms 17-02-28 20:22:32.364 -08 000000038 INF: Excitation Filter 2: Moved 107 steps in 371.8477 ms 17-02-28 20:22:32.364 -08 000000038 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.0191 ms 17-02-28 20:22:32.364 -08 000000038 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.1291 ms 17-02-28 20:22:32.364 -08 000000077 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.0834 ms 17-02-28 20:22:32.364 -08 000000077 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.497 ms 17-02-28 20:22:32.364 -08 000000038 INF: ====================================== 17-02-28 20:22:32.364 -08 000000077 INF: ====================================== 17-02-28 20:22:32.366 -08 000000037 INF: Y Motor: Unshifted Position: 990993 17-02-28 20:22:32.366 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:22:32.366 -08 000000037 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:32.366 -08 000000085 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:32.367 -08 000000085 INF: ====================================== 17-02-28 20:22:32.410 -08 000000089 INF: Camera #2 ReleaseBuffer 17-02-28 20:22:32.410 -08 000000089 INF: ===================Camera TDI=================== 17-02-28 20:22:32.427 -08 000000037 INF: Y Motor: Recv v 0\r 17-02-28 20:22:32.427 -08 000000037 INF: Y Motor: Moved to 14.9099 after 7858 ms 17-02-28 20:22:32.427 -08 000000037 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:22:32.445 -08 000000089 INF: ====================================== 17-02-28 20:22:32.446 -08 000000030 INF: ===================Camera TDI=================== 17-02-28 20:22:32.447 -08 000000030 INF: ====================================== 17-02-28 20:22:32.492 -08 000000037 INF: Y Motor: Recv v 4097\r 17-02-28 20:22:32.492 -08 000000037 INF: Y Motor: Status After move finished OK: 17-02-28 20:22:32.492 -08 000000037 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:32.554 -08 000000037 INF: Y Motor: Recv v 0\r 17-02-28 20:22:32.554 -08 000000037 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:32.554 -08 000000037 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:22:32.616 -08 000000037 INF: Y Motor: Recv v 134217728\r 17-02-28 20:22:32.616 -08 000000037 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-02-28 20:22:32.616 -08 000000037 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:22:32.616 -08 000000037 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:22:32.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:32.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left=================== 17-02-28 20:22:32.678 -08 000000037 INF: Y Motor: Recv v 0\r 17-02-28 20:22:32.678 -08 000000037 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:22:32.678 -08 000000037 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:22:32.678 -08 000000037 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:32.739 -08 000000037 INF: Y Motor: Recv ok\r 17-02-28 20:22:32.739 -08 000000037 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:22:32.739 -08 000000037 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:32.804 -08 000000037 INF: Y Motor: Recv ok\r 17-02-28 20:22:32.804 -08 000000037 INF: ====================================== 17-02-28 20:22:32.805 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:32.806 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:32.807 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:32.807 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-02-28 20:22:32.863 -08 000000095 INF: FPGA: Recv TDICLINES 1023 17-02-28 20:22:32.863 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:22:32.925 -08 000000101 INF: FPGA: Recv TDIYERD 1490994 17-02-28 20:22:32.925 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-02-28 20:22:32.987 -08 000000045 INF: FPGA: Recv ZADCR 34586 17-02-28 20:22:32.987 -08 000000042 INF: At scan end Y pos = 14.910 and Z pos = -0.132. Y moved -48.539 mm 17-02-28 20:22:32.987 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-02-28 20:22:33.051 -08 000000059 INF: FPGA: Recv TDIPULSES 139265 17-02-28 20:22:33.051 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-02-28 20:22:33.051 -08 000000042 INF: TDIScan finished after 12074.4069 ms 17-02-28 20:22:33.051 -08 000000042 INF: Image[0]: Y should trigger at 63.449 mm, 2nd row was at 64.358 mm (error = 0.909 mm) 17-02-28 20:22:33.051 -08 000000042 INF: Image[2]: Y should trigger at 63.449 mm, 2nd row was at 64.358 mm (error = 0.909 mm) 17-02-28 20:22:33.053 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:33.084 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.696 um 17-02-28 20:22:33.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:33.085 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-02-28 20:22:33.113 -08 000000050 INF: FPGA: Recv SWOOF_RDSTAT 0 17-02-28 20:22:33.113 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:33.114 -08 000000052 INF: ===================Dither Clean Up Command=================== 17-02-28 20:22:33.114 -08 000000033 INF: ===================Set YMotor gains for fast moves=================== 17-02-28 20:22:33.114 -08 000000109 INF: ===================Set Y Motor Motor Velocity=================== 17-02-28 20:22:33.114 -08 000000038 INF: ===================Set Z Motor Motor Velocity=================== 17-02-28 20:22:33.115 -08 000000109 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:22:33.115 -08 000000109 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:22:33.115 -08 000000033 INF: ====================================== 17-02-28 20:22:33.115 -08 000000038 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-02-28 20:22:33.115 -08 000000038 INF: FPGA: Xmit ZSTEP 1288471\n 17-02-28 20:22:33.115 -08 000000101 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:22:33.115 -08 000000036 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:22:33.116 -08 000000101 INF: FPGA: Xmit ZSEL 0\n 17-02-28 20:22:33.118 -08 000000036 INF: ===================LFT:Extracting coords=================== 17-02-28 20:22:33.144 -08 000000036 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:22:33.145 -08 000000036 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-02-28 20:22:33.146 -08 000000069 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:33.146 -08 000000104 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:33.146 -08 000000089 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:33.146 -08 000000058 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:33.146 -08 000000069 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:22:33.146 -08 000000104 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:22:33.146 -08 000000058 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:22:33.146 -08 000000089 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:22:33.175 -08 000000072 INF: FPGA: Recv ZSTEP 17-02-28 20:22:33.175 -08 000000072 INF: FPGA: Recv ZSEL 17-02-28 20:22:33.175 -08 000000101 INF: FPGA: Xmit ZDACW 40366\n 17-02-28 20:22:33.175 -08 000000038 INF: ====================================== 17-02-28 20:22:33.176 -08 000000109 INF: Y Motor: Recv ok\r 17-02-28 20:22:33.176 -08 000000109 INF: ====================================== 17-02-28 20:22:33.220 -08 000000069 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:22:33.220 -08 000000104 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:22:33.220 -08 000000058 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:22:33.221 -08 000000089 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:22:33.236 -08 000000077 INF: FPGA: Recv ZDACW 17-02-28 20:22:33.236 -08 000000101 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-02-28 20:22:33.237 -08 000000101 INF: FPGA: Xmit TDIBB 0\n 17-02-28 20:22:33.301 -08 000000108 INF: FPGA: Recv TDIBB 17-02-28 20:22:33.301 -08 000000101 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:22:33.302 -08 000000101 INF: ====================================== 17-02-28 20:22:33.371 -08 000000069 INF: LFT found best fwhm score 2.000168 in 151 ms 17-02-28 20:22:33.371 -08 000000069 INF: LFT found good score at index 5353 with fwhm value 2.000168. Next cycle, cycle 4 starting Z position for top surface is at -0.156 mm FC:B, C:3,L:2,T 17-02-28 20:22:33.371 -08 000000104 INF: LFT found best fwhm score 2.000268 in 151 ms 17-02-28 20:22:33.371 -08 000000058 INF: LFT found best fwhm score 2.104398 in 151 ms 17-02-28 20:22:33.372 -08 000000104 INF: LFT found good score at index 3525 with fwhm value 2.000268. Next cycle, cycle 4 starting Z position for top surface is at -0.156 mm FC:B, C:3,L:2,T 17-02-28 20:22:33.372 -08 000000058 INF: LFT found good score at index 2517 with fwhm value 2.104398. Next cycle, cycle 4 starting Z position for top surface is at -0.156 mm FC:B, C:3,L:2,T 17-02-28 20:22:33.372 -08 000000069 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:33.372 -08 000000104 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:33.372 -08 000000058 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:33.372 -08 000000069 INF: ====================================== 17-02-28 20:22:33.372 -08 000000104 INF: ====================================== 17-02-28 20:22:33.372 -08 000000089 INF: LFT found best fwhm score 2.000015 in 151 ms 17-02-28 20:22:33.372 -08 000000089 INF: LFT found good score at index 6265 with fwhm value 2.000015. Next cycle, cycle 4 starting Z position for top surface is at -0.155 mm FC:B, C:3,L:2,T 17-02-28 20:22:33.372 -08 000000058 INF: ====================================== 17-02-28 20:22:33.372 -08 000000089 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:33.373 -08 000000089 INF: ====================================== 17-02-28 20:22:33.373 -08 000000036 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:22:33.374 -08 000000036 INF: LFT weighted average best Z for top surface is at -0.156mm FC:B, C:3,L:2,T 17-02-28 20:22:33.374 -08 000000036 INF: ====================================== 17-02-28 20:22:33.376 -08 000000052 INF: ====================================== 17-02-28 20:22:33.376 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:33.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-02-28 20:22:33.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:33.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-02-28 20:22:33.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:33.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-02-28 20:22:33.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:33.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-02-28 20:22:33.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:33.379 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308=================== 17-02-28 20:22:33.379 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308=================== 17-02-28 20:22:33.379 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left, Waiting for image analysis=================== 17-02-28 20:22:33.380 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left=================== 17-02-28 20:22:33.380 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Waiting for image analysis=================== 17-02-28 20:22:33.380 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308=================== 17-02-28 20:22:33.403 -08 000000042 INF: Waited 24 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 17-02-28 20:22:33.403 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:33.403 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308=================== 17-02-28 20:22:33.403 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:33.404 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308=================== 17-02-28 20:22:33.404 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-02-28 20:22:33.404 -08 000000042 INF: Transformed XStagePosition from 72.50464 mm to 72.4811786711216 mm. 17-02-28 20:22:33.416 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5582643555254 mm. 17-02-28 20:22:33.416 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3582643555254 mm. 17-02-28 20:22:33.416 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4490143555254 mm. 17-02-28 20:22:33.425 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:33.425 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-02-28 20:22:33.425 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:33.425 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -154.0 um, section = B_1 17-02-28 20:22:33.428 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:33.428 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:33.444 -08 000000105 INF: ===================MoveEmissionFilters=================== 17-02-28 20:22:33.445 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:22:33.446 -08 000000075 INF: ===================Move X,Y=================== 17-02-28 20:22:33.446 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":2,"Tile":1101,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF215","HCSMMF234","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.446 -08 000000075 INF: ===================Move X,Y, Parallel=================== 17-02-28 20:22:33.492 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:22:33.492 -08 000000077 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:22:33.492 -08 000000074 INF: ===================Move X Motor without settling=================== 17-02-28 20:22:33.492 -08 000000074 INF: X Motor: Xmit PR VM\n 17-02-28 20:22:33.493 -08 000000077 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:22:33.493 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:22:33.495 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:22:33.497 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:22:33.499 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-02-28 20:22:33.499 -08 000000104 INF: Z Motor: Entering MoveAbsStepped 17-02-28 20:22:33.500 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:22:33.504 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-02-28 20:22:33.507 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:22:33.507 -08 000000072 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-02-28 20:22:33.508 -08 000000064 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-02-28 20:22:33.508 -08 000000072 INF: ====================================== 17-02-28 20:22:33.508 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:22:33.509 -08 000000064 INF: ====================================== 17-02-28 20:22:33.510 -08 000000082 INF: ===================Move Y Motor without settling=================== 17-02-28 20:22:33.511 -08 000000082 INF: Y Motor: Moving to 64.5583 mm @25.000 mm/sec, started at 14.9099 mm 17-02-28 20:22:33.511 -08 000000082 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:22:33.511 -08 000000082 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:33.518 -08 000000060 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:33.519 -08 000000060 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:33.519 -08 000000060 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:22:33.520 -08 000000060 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:22:33.520 -08 000000060 INF: FPGA: Xmit ZSEL 3\n 17-02-28 20:22:33.523 -08 000000091 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-02-28 20:22:33.523 -08 000000099 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-02-28 20:22:33.523 -08 000000099 INF: Emission Filter 12: Remaining IntoPath 17-02-28 20:22:33.523 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-02-28 20:22:33.523 -08 000000091 INF: ====================================== 17-02-28 20:22:33.523 -08 000000099 INF: ====================================== 17-02-28 20:22:33.523 -08 000000051 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-02-28 20:22:33.524 -08 000000036 INF: ====================================== 17-02-28 20:22:33.524 -08 000000051 INF: ====================================== 17-02-28 20:22:33.525 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:22:33.525 -08 000000099 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-02-28 20:22:33.525 -08 000000051 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-02-28 20:22:33.526 -08 000000099 INF: ====================================== 17-02-28 20:22:33.526 -08 000000077 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:22:33.526 -08 000000047 INF: ====================================== 17-02-28 20:22:33.526 -08 000000051 INF: ====================================== 17-02-28 20:22:33.527 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:22:33.527 -08 000000077 INF: ====================================== 17-02-28 20:22:33.528 -08 000000089 INF: ====================================== 17-02-28 20:22:33.539 -08 000000091 INF: ===================Camera Arm TDI=================== 17-02-28 20:22:33.540 -08 000000091 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:22:33.541 -08 000000091 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:22:33.566 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:22:33.568 -08 000000076 INF: ====================================== 17-02-28 20:22:33.569 -08 000000105 INF: ====================================== 17-02-28 20:22:33.578 -08 000000074 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-02-28 20:22:33.578 -08 000000074 INF: X Motor: Xmit PR VI\n 17-02-28 20:22:33.604 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":2,"Tile":1102,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF239","HCSMMF244","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.615 -08 000000062 INF: FPGA: Recv ZSEL 17-02-28 20:22:33.616 -08 000000060 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:22:33.616 -08 000000060 INF: FPGA: Xmit TDIBB 1\n 17-02-28 20:22:33.621 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":2,"Tile":1106,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF210","HCSMMF214","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.623 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":2,"Tile":1110,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF242","HCSMMF187","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:33.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 5 of 10 seconds left=================== 17-02-28 20:22:33.628 -08 000000074 INF: X Motor: Recv PR VI\r\n410\r\n> 17-02-28 20:22:33.628 -08 000000074 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-02-28 20:22:33.628 -08 000000074 INF: X Motor: Moving to 72.4812 mm @15.000 mm/sec, started at 71.3779 mm 17-02-28 20:22:33.628 -08 000000074 INF: X Motor: Xmit MA 5522\n 17-02-28 20:22:33.633 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":2,"Tile":1107,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF246","HCSMMF238","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.634 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":2,"Tile":1113,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF264","HCSMMF256","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.634 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":2,"Tile":1111,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF192","HCSMMF287","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.635 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":2,"Tile":1105,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF250","HCSMMF269","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.636 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":2,"Tile":1104,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF267","HCSMMF219","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.637 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":2,"Tile":1116,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF189","HCSMMF224","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.638 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":2,"Tile":1114,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF194","HCSMMF261","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.639 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":2,"Tile":1103,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF206","HCSMMF218","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.640 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":2,"Tile":1109,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF200","HCSMMF181","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.641 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":2,"Tile":1112,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF217","HCSMMF220","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.642 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":2,"Tile":1122,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF266","HCSMMF259","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.643 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":2,"Tile":1115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF248","HCSMMF254","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.643 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":2,"Tile":1108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF232","HCSMMF229","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.644 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":2,"Tile":1123,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF240","HCSMMF272","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.645 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":2,"Tile":1121,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF230","HCSMMF278","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.646 -08 000000082 INF: Y Motor: Recv ok\r 17-02-28 20:22:33.646 -08 000000082 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:22:33.646 -08 000000082 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:33.646 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":2,"Tile":1127,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF265","HCSMMF198","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.647 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":2,"Tile":1120,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF226","HCSMMF196","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.648 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":2,"Tile":1126,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF283","HCSMMF209","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.649 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":2,"Tile":1118,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF222","HCSMMF233","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.650 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":2,"Tile":1117,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF255","HCSMMF268","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.651 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":2,"Tile":1124,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF247","HCSMMF204","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.652 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":2,"Tile":1119,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF231","HCSMMF177","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.653 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":2,"Tile":1125,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF193","HCSMMF223","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.656 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":2,"Tile":1128,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF199","HCSMMF236","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:33.657 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:33.664 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-02-28 20:22:33.677 -08 000000099 INF: FPGA: Recv TDIBB 17-02-28 20:22:33.678 -08 000000060 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:22:33.679 -08 000000060 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:22:33.680 -08 000000060 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:33.681 -08 000000060 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-02-28 20:22:33.681 -08 000000060 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-02-28 20:22:33.681 -08 000000060 INF: FPGA: Xmit ZSTEP 1792263\n 17-02-28 20:22:33.692 -08 000000074 INF: X Motor: Recv MA 5522\r\n> 17-02-28 20:22:33.692 -08 000000074 INF: X Motor: WaitUntilStopped 60074 17-02-28 20:22:33.707 -08 000000082 INF: Y Motor: Recv ok\r 17-02-28 20:22:33.707 -08 000000082 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:33.736 -08 000000078 INF: FPGA: Recv ZSTEP 17-02-28 20:22:33.736 -08 000000060 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:33.738 -08 000000060 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-02-28 20:22:33.738 -08 000000060 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:33.740 -08 000000060 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-02-28 20:22:33.740 -08 000000060 INF: Z Motor: Entering ArmAbsStepped 17-02-28 20:22:33.740 -08 000000060 INF: Z Motor: Arming to move to -0.1140 mm 17-02-28 20:22:33.740 -08 000000060 INF: FPGA: Xmit ZYT 6435826 4\n 17-02-28 20:22:33.748 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:33.748 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-02-28 20:22:33.771 -08 000000082 INF: Y Motor: Recv v 0\r 17-02-28 20:22:33.771 -08 000000082 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:33.771 -08 000000082 INF: Y Motor: Set target position to 5955826 encoder counts 17-02-28 20:22:33.771 -08 000000082 INF: Y Motor: Xmit s r0xca 5955826\r 17-02-28 20:22:33.785 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:33.791 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-02-28 20:22:33.800 -08 000000098 INF: FPGA: Recv ZYT 17-02-28 20:22:33.800 -08 000000060 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490993 enc / 14.910 mm / ) = 6435826 enc / 64.358 mm 17-02-28 20:22:33.800 -08 000000060 INF: FPGA: Xmit ZARM 29880\n 17-02-28 20:22:33.833 -08 000000082 INF: Y Motor: Recv ok\r 17-02-28 20:22:33.833 -08 000000082 INF: Y Motor: Start the move command 17-02-28 20:22:33.833 -08 000000082 INF: Y Motor: Xmit t 1\r 17-02-28 20:22:33.861 -08 000000036 INF: FPGA: Recv ZARM 17-02-28 20:22:33.861 -08 000000060 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.9288 ms 17-02-28 20:22:33.861 -08 000000060 INF: Z Motor: ArmAbsStepped took 120.7449 ms 17-02-28 20:22:33.861 -08 000000060 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:33.863 -08 000000060 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:33.864 -08 000000060 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-02-28 20:22:33.864 -08 000000060 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:33.866 -08 000000060 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-02-28 20:22:33.866 -08 000000060 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:33.868 -08 000000060 INF: ====================================== 17-02-28 20:22:33.888 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:33.894 -08 000000082 INF: Y Motor: Recv ok\r 17-02-28 20:22:33.894 -08 000000082 INF: Y Motor: WaitUntilStopped 61986 17-02-28 20:22:33.894 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:33.894 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-02-28 20:22:34.019 -08 000000082 INF: Y Motor: Unshifted Position: 1073787 17-02-28 20:22:34.022 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:34.028 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-02-28 20:22:34.069 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:34.119 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:34.141 -08 000000091 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:22:34.141 -08 000000091 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:22:34.141 -08 000000091 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:22:34.156 -08 000000091 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:22:34.158 -08 000000091 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:22:34.193 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:34.317 -08 000000074 INF: X Motor: Xmit PR ER\n 17-02-28 20:22:34.332 -08 000000082 INF: Y Motor: Unshifted Position: 1775165 17-02-28 20:22:34.378 -08 000000074 INF: X Motor: Recv PR ER\r\n0\r\n> 17-02-28 20:22:34.378 -08 000000074 INF: X Motor: Moved to 72.4814 after 686 ms 17-02-28 20:22:34.378 -08 000000074 INF: ====================================== 17-02-28 20:22:34.382 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:34.414 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-02-28 20:22:34.505 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:34.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:34.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 4 of 10 seconds left=================== 17-02-28 20:22:34.644 -08 000000082 INF: Y Motor: Unshifted Position: 2556012 17-02-28 20:22:34.694 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:34.765 -08 000000091 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:22:34.766 -08 000000091 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:22:34.766 -08 000000091 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:22:34.781 -08 000000091 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:22:34.783 -08 000000091 INF: ===================Camera Arm TDI=================== 17-02-28 20:22:34.784 -08 000000091 INF: ====================================== 17-02-28 20:22:34.785 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:22:34.786 -08 000000104 INF: ====================================== 17-02-28 20:22:34.817 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:34.956 -08 000000082 INF: Y Motor: Unshifted Position: 3335955 17-02-28 20:22:35.006 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:35.129 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:35.266 -08 000000082 INF: Y Motor: Unshifted Position: 4119362 17-02-28 20:22:35.316 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:35.442 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:35.579 -08 000000082 INF: Y Motor: Unshifted Position: 4899297 17-02-28 20:22:35.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:35.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 3 of 10 seconds left=================== 17-02-28 20:22:35.629 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:35.755 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:35.891 -08 000000082 INF: Y Motor: Unshifted Position: 5681208 17-02-28 20:22:35.941 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:36.067 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:36.204 -08 000000082 INF: Y Motor: Unshifted Position: 5955829 17-02-28 20:22:36.204 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:22:36.204 -08 000000082 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:36.265 -08 000000082 INF: Y Motor: Recv v 0\r 17-02-28 20:22:36.265 -08 000000082 INF: Y Motor: Moved to 64.5583 after 2371 ms 17-02-28 20:22:36.265 -08 000000082 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:22:36.328 -08 000000082 INF: Y Motor: Recv v 4096\r 17-02-28 20:22:36.328 -08 000000082 INF: Y Motor: Status After move finished OK: 17-02-28 20:22:36.328 -08 000000082 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:36.392 -08 000000082 INF: Y Motor: Recv v 0\r 17-02-28 20:22:36.392 -08 000000082 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:36.392 -08 000000082 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:22:36.453 -08 000000082 INF: Y Motor: Recv v 402653184\r 17-02-28 20:22:36.453 -08 000000082 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-02-28 20:22:36.453 -08 000000082 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:22:36.453 -08 000000082 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:22:36.517 -08 000000082 INF: Y Motor: Recv v 0\r 17-02-28 20:22:36.517 -08 000000082 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:22:36.517 -08 000000082 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:22:36.517 -08 000000082 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:36.578 -08 000000082 INF: Y Motor: Recv ok\r 17-02-28 20:22:36.578 -08 000000082 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:22:36.578 -08 000000082 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:36.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:36.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 2 of 10 seconds left=================== 17-02-28 20:22:36.640 -08 000000082 INF: Y Motor: Recv ok\r 17-02-28 20:22:36.640 -08 000000082 INF: ====================================== 17-02-28 20:22:36.641 -08 000000075 INF: ===================Move X,Y=================== 17-02-28 20:22:36.642 -08 000000075 INF: ====================================== 17-02-28 20:22:36.643 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:36.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:36.644 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-02-28 20:22:36.644 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-02-28 20:22:36.704 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:22:36.704 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-02-28 20:22:36.733 -08 000000038 INF: FPGA: Recv ZFREQCL 17-02-28 20:22:36.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-02-28 20:22:36.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:36.734 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:22:36.794 -08 000000047 INF: FPGA: Recv TDIYERD 6455828 17-02-28 20:22:36.794 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455828 counts (64.558 mm) 17-02-28 20:22:36.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:36.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:36.796 -08 000000073 INF: ===================Set YMotor gains for scans=================== 17-02-28 20:22:36.796 -08 000000091 INF: ===================TDI FPGA Arm=================== 17-02-28 20:22:36.796 -08 000000073 INF: ====================================== 17-02-28 20:22:36.797 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:22:36.797 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-02-28 20:22:36.798 -08 000000091 INF: FPGA: Xmit TDIYPOS 6344901\n 17-02-28 20:22:36.858 -08 000000085 INF: FPGA: Recv TDIYPOS 17-02-28 20:22:36.858 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:22:36.860 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-02-28 20:22:36.860 -08 000000091 INF: FPGA: Xmit TDIYARM3 139264 6435826 1 1\n 17-02-28 20:22:36.919 -08 000000104 INF: FPGA: Recv TDIYARM3 17-02-28 20:22:36.919 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:22:36.921 -08 000000091 INF: ===================TDI FPGA Arm=================== 17-02-28 20:22:36.921 -08 000000091 INF: ====================================== 17-02-28 20:22:36.923 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:36.923 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:36.923 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:36.924 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:36.924 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:36.925 -08 000000082 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-02-28 20:22:36.925 -08 000000083 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-02-28 20:22:36.925 -08 000000082 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-02-28 20:22:36.925 -08 000000082 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-02-28 20:22:36.926 -08 000000082 INF: Excitation Filter 2: Moving -107 steps 17-02-28 20:22:36.926 -08 000000083 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-02-28 20:22:36.926 -08 000000083 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-02-28 20:22:36.926 -08 000000083 INF: Excitation Filter 1: Moving -107 steps 17-02-28 20:22:36.926 -08 000000082 INF: FPGA: Xmit EX2MV -107\n 17-02-28 20:22:36.927 -08 000000083 INF: FPGA: Xmit EX1MV -107\n 17-02-28 20:22:37.293 -08 000000030 INF: FPGA: Recv EX2MV 17-02-28 20:22:37.293 -08 000000030 INF: FPGA: Recv EX1MV 17-02-28 20:22:37.293 -08 000000083 INF: Excitation Filter 1: Moved -107 steps in 367.3409 ms 17-02-28 20:22:37.293 -08 000000082 INF: Excitation Filter 2: Moved -107 steps in 367.4974 ms 17-02-28 20:22:37.293 -08 000000083 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.588 ms 17-02-28 20:22:37.293 -08 000000082 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.7461 ms 17-02-28 20:22:37.293 -08 000000082 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.9324 ms 17-02-28 20:22:37.293 -08 000000083 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.7187 ms 17-02-28 20:22:37.294 -08 000000082 INF: ====================================== 17-02-28 20:22:37.294 -08 000000083 INF: ====================================== 17-02-28 20:22:37.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:37.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:37.298 -08 000000099 INF: ===================Camera TDI=================== 17-02-28 20:22:37.298 -08 000000105 INF: ===================FPGA Z Wait=================== 17-02-28 20:22:37.298 -08 000000085 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:37.298 -08 000000105 INF: FPGA: Xmit ZWAIT\n 17-02-28 20:22:37.299 -08 000000060 INF: ===================Move Y Motor without settling=================== 17-02-28 20:22:37.299 -08 000000060 INF: Y Motor: Moving to 14.9099 mm @6.500 mm/sec, started at 64.5583 mm 17-02-28 20:22:37.299 -08 000000099 INF: ===================Camera TDI, Parallel=================== 17-02-28 20:22:37.299 -08 000000060 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:22:37.299 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:37.299 -08 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-02-28 20:22:37.300 -08 000000085 INF: FPGA: Xmit TDIYWAIT\n 17-02-28 20:22:37.300 -08 000000091 INF: ===================Camera TDI=================== 17-02-28 20:22:37.301 -08 000000069 INF: ===================Camera TDI=================== 17-02-28 20:22:37.302 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:37.302 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:37.304 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:37.304 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:37.329 -08 000000060 INF: Y Motor: Recv ok\r 17-02-28 20:22:37.329 -08 000000060 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:22:37.329 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:37.390 -08 000000060 INF: Y Motor: Recv ok\r 17-02-28 20:22:37.390 -08 000000060 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:37.451 -08 000000060 INF: Y Motor: Recv v 0\r 17-02-28 20:22:37.451 -08 000000060 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:37.451 -08 000000060 INF: Y Motor: Set target position to 990993 encoder counts 17-02-28 20:22:37.451 -08 000000060 INF: Y Motor: Xmit s r0xca 990993\r 17-02-28 20:22:37.452 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:37.452 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:37.454 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:37.454 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:37.515 -08 000000060 INF: Y Motor: Recv ok\r 17-02-28 20:22:37.515 -08 000000060 INF: Y Motor: Start the move command 17-02-28 20:22:37.515 -08 000000060 INF: Y Motor: Xmit t 1\r 17-02-28 20:22:37.577 -08 000000060 INF: Y Motor: Recv ok\r 17-02-28 20:22:37.577 -08 000000060 INF: Y Motor: WaitUntilStopped 67638 17-02-28 20:22:37.577 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:37.602 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:37.602 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:37.604 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:37.604 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:37.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:37.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 1 of 10 seconds left=================== 17-02-28 20:22:37.667 -08 000000087 INF: FPGA: Recv ZWAIT 17-02-28 20:22:37.667 -08 000000105 INF: ====================================== 17-02-28 20:22:37.702 -08 000000060 INF: Y Motor: Unshifted Position: 5892671 17-02-28 20:22:37.752 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:37.752 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-02-28 20:22:37.752 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-02-28 20:22:37.752 -08 000000069 INF: ===================Camera #2 Frame #6=================== 17-02-28 20:22:37.754 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-02-28 20:22:37.754 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-02-28 20:22:37.754 -08 000000091 INF: ===================Camera #0 Frame #6=================== 17-02-28 20:22:37.877 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:37.931 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12. 17-02-28 20:22:37.931 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12. 17-02-28 20:22:37.931 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12 17-02-28 20:22:37.931 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12 17-02-28 20:22:37.931 -08 000000091 INF: ===================Camera #0 Frame #12=================== 17-02-28 20:22:37.931 -08 000000069 INF: ===================Camera #2 Frame #12=================== 17-02-28 20:22:38.014 -08 000000060 INF: Y Motor: Unshifted Position: 5689654 17-02-28 20:22:38.064 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:38.108 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 18, frameCount = 19. 17-02-28 20:22:38.108 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 19 17-02-28 20:22:38.108 -08 000000091 INF: ===================Camera #0 Frame #19=================== 17-02-28 20:22:38.118 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 18, frameCount = 19. 17-02-28 20:22:38.118 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 19 17-02-28 20:22:38.118 -08 000000069 INF: ===================Camera #2 Frame #19=================== 17-02-28 20:22:38.189 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:38.288 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 24, frameCount = 25. 17-02-28 20:22:38.288 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 25 17-02-28 20:22:38.288 -08 000000091 INF: ===================Camera #0 Frame #25=================== 17-02-28 20:22:38.300 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 25, frameCount = 26. 17-02-28 20:22:38.300 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 26 17-02-28 20:22:38.300 -08 000000069 INF: ===================Camera #2 Frame #26=================== 17-02-28 20:22:38.327 -08 000000060 INF: Y Motor: Unshifted Position: 5488167 17-02-28 20:22:38.377 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:38.464 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 31, frameCount = 32. 17-02-28 20:22:38.464 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 32 17-02-28 20:22:38.464 -08 000000091 INF: ===================Camera #0 Frame #32=================== 17-02-28 20:22:38.484 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 32, frameCount = 33. 17-02-28 20:22:38.484 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 33 17-02-28 20:22:38.484 -08 000000069 INF: ===================Camera #2 Frame #33=================== 17-02-28 20:22:38.499 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:38.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:38.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:38.624 -08 000000018 INF: WaitCommand(10000) end 17-02-28 20:22:38.625 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:38.625 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock=================== 17-02-28 20:22:38.626 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle=================== 17-02-28 20:22:38.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:22:38.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:22:38.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:22:38.629 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:38.639 -08 000000060 INF: Y Motor: Unshifted Position: 5285363 17-02-28 20:22:38.642 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 37, frameCount = 38. 17-02-28 20:22:38.642 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 38 17-02-28 20:22:38.642 -08 000000091 INF: ===================Camera #0 Frame #38=================== 17-02-28 20:22:38.656 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 38, frameCount = 39. 17-02-28 20:22:38.656 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 39 17-02-28 20:22:38.656 -08 000000069 INF: ===================Camera #2 Frame #39=================== 17-02-28 20:22:38.669 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:22:38.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB1 (4)=================== 17-02-28 20:22:38.669 -08 000000018 INF: Valve A1: Go to position 4 17-02-28 20:22:38.669 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-02-28 20:22:38.689 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:38.730 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 7\r 17-02-28 20:22:38.730 -08 000000018 INF: Valve A1: 38.763 seconds since last move, > 10.000 seconds required between moves 17-02-28 20:22:38.730 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 7 to 4 17-02-28 20:22:38.730 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC4\r 17-02-28 20:22:38.730 -08 000000018 INF: SerialPort A1 (VICIA1): Recv (discarded) 17-02-28 20:22:38.730 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-02-28 20:22:38.811 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:38.813 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 44, frameCount = 45. 17-02-28 20:22:38.813 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 45 17-02-28 20:22:38.813 -08 000000091 INF: ===================Camera #0 Frame #45=================== 17-02-28 20:22:38.825 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 44, frameCount = 45. 17-02-28 20:22:38.825 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 45 17-02-28 20:22:38.825 -08 000000069 INF: ===================Camera #2 Frame #45=================== 17-02-28 20:22:38.951 -08 000000060 INF: Y Motor: Unshifted Position: 5082337 17-02-28 20:22:38.994 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51. 17-02-28 20:22:38.994 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51 17-02-28 20:22:38.994 -08 000000091 INF: ===================Camera #0 Frame #51=================== 17-02-28 20:22:39.001 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:39.003 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 51, frameCount = 52. 17-02-28 20:22:39.003 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 52 17-02-28 20:22:39.003 -08 000000069 INF: ===================Camera #2 Frame #52=================== 17-02-28 20:22:39.123 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:39.167 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 4\r 17-02-28 20:22:39.167 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:22:39.167 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 17-02-28 20:22:39.170 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 57, frameCount = 58. 17-02-28 20:22:39.170 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 58 17-02-28 20:22:39.170 -08 000000091 INF: ===================Camera #0 Frame #58=================== 17-02-28 20:22:39.185 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 57, frameCount = 58. 17-02-28 20:22:39.185 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 58 17-02-28 20:22:39.185 -08 000000069 INF: ===================Camera #2 Frame #58=================== 17-02-28 20:22:39.263 -08 000000060 INF: Y Motor: Unshifted Position: 4879538 17-02-28 20:22:39.313 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:39.341 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64. 17-02-28 20:22:39.341 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64 17-02-28 20:22:39.341 -08 000000091 INF: ===================Camera #0 Frame #64=================== 17-02-28 20:22:39.360 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 64, frameCount = 65. 17-02-28 20:22:39.360 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 65 17-02-28 20:22:39.360 -08 000000069 INF: ===================Camera #2 Frame #65=================== 17-02-28 20:22:39.435 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:39.518 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 70, frameCount = 71. 17-02-28 20:22:39.518 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 71 17-02-28 20:22:39.518 -08 000000091 INF: ===================Camera #0 Frame #71=================== 17-02-28 20:22:39.544 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 71, frameCount = 72. 17-02-28 20:22:39.544 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 72 17-02-28 20:22:39.544 -08 000000069 INF: ===================Camera #2 Frame #72=================== 17-02-28 20:22:39.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:22:39.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-02-28 20:22:39.553 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:39.575 -08 000000060 INF: Y Motor: Unshifted Position: 4676523 17-02-28 20:22:39.605 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:22:39.618 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 4, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 80, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000 17-02-28 20:22:39.625 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:39.693 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77. 17-02-28 20:22:39.693 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77 17-02-28 20:22:39.693 -08 000000091 INF: ===================Camera #0 Frame #77=================== 17-02-28 20:22:39.705 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:22:39.717 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 77, frameCount = 78. 17-02-28 20:22:39.717 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 78 17-02-28 20:22:39.717 -08 000000069 INF: ===================Camera #2 Frame #78=================== 17-02-28 20:22:39.747 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:39.791 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 17-02-28 20:22:39.791 -08 000000018 INF: Current Position of Pump is: 0 17-02-28 20:22:39.868 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 83, frameCount = 84. 17-02-28 20:22:39.868 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 84 17-02-28 20:22:39.868 -08 000000091 INF: ===================Camera #0 Frame #84=================== 17-02-28 20:22:39.887 -08 000000060 INF: Y Motor: Unshifted Position: 4473712 17-02-28 20:22:39.888 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 83, frameCount = 84. 17-02-28 20:22:39.888 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 84 17-02-28 20:22:39.888 -08 000000069 INF: ===================Camera #2 Frame #84=================== 17-02-28 20:22:39.891 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r 17-02-28 20:22:39.937 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:39.978 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:40.039 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90. 17-02-28 20:22:40.039 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90 17-02-28 20:22:40.039 -08 000000091 INF: ===================Camera #0 Frame #90=================== 17-02-28 20:22:40.057 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91. 17-02-28 20:22:40.057 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91 17-02-28 20:22:40.057 -08 000000069 INF: ===================Camera #2 Frame #91=================== 17-02-28 20:22:40.059 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:40.078 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:40.165 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:40.199 -08 000000060 INF: Y Motor: Unshifted Position: 4270696 17-02-28 20:22:40.208 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96. 17-02-28 20:22:40.208 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96 17-02-28 20:22:40.208 -08 000000091 INF: ===================Camera #0 Frame #96=================== 17-02-28 20:22:40.230 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 96, frameCount = 97. 17-02-28 20:22:40.230 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 97 17-02-28 20:22:40.230 -08 000000069 INF: ===================Camera #2 Frame #97=================== 17-02-28 20:22:40.249 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:40.372 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:40.377 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102. 17-02-28 20:22:40.377 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102 17-02-28 20:22:40.377 -08 000000091 INF: ===================Camera #0 Frame #102=================== 17-02-28 20:22:40.400 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 102, frameCount = 103. 17-02-28 20:22:40.400 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 103 17-02-28 20:22:40.400 -08 000000069 INF: ===================Camera #2 Frame #103=================== 17-02-28 20:22:40.415 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:40.480 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:22:40.509 -08 000000060 INF: Y Motor: Unshifted Position: 4067241 17-02-28 20:22:40.546 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109. 17-02-28 20:22:40.546 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109 17-02-28 20:22:40.546 -08 000000091 INF: ===================Camera #0 Frame #109=================== 17-02-28 20:22:40.559 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:40.569 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109. 17-02-28 20:22:40.569 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109 17-02-28 20:22:40.569 -08 000000069 INF: ===================Camera #2 Frame #109=================== 17-02-28 20:22:40.580 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r 17-02-28 20:22:40.666 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:40.684 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:40.718 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115. 17-02-28 20:22:40.718 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115 17-02-28 20:22:40.718 -08 000000091 INF: ===================Camera #0 Frame #115=================== 17-02-28 20:22:40.739 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 115, frameCount = 116. 17-02-28 20:22:40.739 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 116 17-02-28 20:22:40.739 -08 000000069 INF: ===================Camera #2 Frame #116=================== 17-02-28 20:22:40.766 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:40.821 -08 000000060 INF: Y Motor: Unshifted Position: 3864229 17-02-28 20:22:40.851 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:22:40.851 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB=================== 17-02-28 20:22:40.871 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:40.887 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121. 17-02-28 20:22:40.887 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121 17-02-28 20:22:40.887 -08 000000091 INF: ===================Camera #0 Frame #121=================== 17-02-28 20:22:40.912 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 121, frameCount = 122. 17-02-28 20:22:40.912 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 122 17-02-28 20:22:40.912 -08 000000069 INF: ===================Camera #2 Frame #122=================== 17-02-28 20:22:40.951 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP15360R\r 17-02-28 20:22:40.995 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:41.040 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:41.056 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127. 17-02-28 20:22:41.056 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127 17-02-28 20:22:41.056 -08 000000091 INF: ===================Camera #0 Frame #127=================== 17-02-28 20:22:41.082 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 127, frameCount = 128. 17-02-28 20:22:41.082 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 128 17-02-28 20:22:41.082 -08 000000069 INF: ===================Camera #2 Frame #128=================== 17-02-28 20:22:41.134 -08 000000060 INF: Y Motor: Unshifted Position: 3660773 17-02-28 20:22:41.140 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:41.164 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:41.184 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:41.225 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134. 17-02-28 20:22:41.225 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134 17-02-28 20:22:41.225 -08 000000091 INF: ===================Camera #0 Frame #134=================== 17-02-28 20:22:41.251 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135. 17-02-28 20:22:41.251 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135 17-02-28 20:22:41.251 -08 000000069 INF: ===================Camera #2 Frame #135=================== 17-02-28 20:22:41.309 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:41.396 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140. 17-02-28 20:22:41.396 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140 17-02-28 20:22:41.396 -08 000000091 INF: ===================Camera #0 Frame #140=================== 17-02-28 20:22:41.414 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:41.424 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 140, frameCount = 141. 17-02-28 20:22:41.424 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 141 17-02-28 20:22:41.424 -08 000000069 INF: ===================Camera #2 Frame #141=================== 17-02-28 20:22:41.445 -08 000000060 INF: Y Motor: Unshifted Position: 3457761 17-02-28 20:22:41.475 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:41.495 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:41.564 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146. 17-02-28 20:22:41.564 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146 17-02-28 20:22:41.564 -08 000000091 INF: ===================Camera #0 Frame #146=================== 17-02-28 20:22:41.593 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 146, frameCount = 147. 17-02-28 20:22:41.593 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 147 17-02-28 20:22:41.593 -08 000000069 INF: ===================Camera #2 Frame #147=================== 17-02-28 20:22:41.620 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:41.725 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:41.732 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152. 17-02-28 20:22:41.732 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152 17-02-28 20:22:41.732 -08 000000091 INF: ===================Camera #0 Frame #152=================== 17-02-28 20:22:41.757 -08 000000060 INF: Y Motor: Unshifted Position: 3255392 17-02-28 20:22:41.762 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 152, frameCount = 153. 17-02-28 20:22:41.762 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 153 17-02-28 20:22:41.762 -08 000000069 INF: ===================Camera #2 Frame #153=================== 17-02-28 20:22:41.787 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:41.807 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:41.900 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158. 17-02-28 20:22:41.900 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158 17-02-28 20:22:41.900 -08 000000091 INF: ===================Camera #0 Frame #158=================== 17-02-28 20:22:41.931 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:41.931 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160. 17-02-28 20:22:41.931 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160 17-02-28 20:22:41.931 -08 000000069 INF: ===================Camera #2 Frame #160=================== 17-02-28 20:22:42.039 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:42.068 -08 000000060 INF: Y Motor: Unshifted Position: 3053251 17-02-28 20:22:42.068 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165. 17-02-28 20:22:42.068 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165 17-02-28 20:22:42.068 -08 000000091 INF: ===================Camera #0 Frame #165=================== 17-02-28 20:22:42.101 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:42.103 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 165, frameCount = 166. 17-02-28 20:22:42.103 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 166 17-02-28 20:22:42.103 -08 000000069 INF: ===================Camera #2 Frame #166=================== 17-02-28 20:22:42.118 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:42.239 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171. 17-02-28 20:22:42.239 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171 17-02-28 20:22:42.239 -08 000000091 INF: ===================Camera #0 Frame #171=================== 17-02-28 20:22:42.243 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:42.272 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 171, frameCount = 172. 17-02-28 20:22:42.272 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 172 17-02-28 20:22:42.272 -08 000000069 INF: ===================Camera #2 Frame #172=================== 17-02-28 20:22:42.351 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:42.380 -08 000000060 INF: Y Motor: Unshifted Position: 2850453 17-02-28 20:22:42.407 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177. 17-02-28 20:22:42.407 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177 17-02-28 20:22:42.407 -08 000000091 INF: ===================Camera #0 Frame #177=================== 17-02-28 20:22:42.413 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:42.430 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:42.441 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 177, frameCount = 178. 17-02-28 20:22:42.441 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 178 17-02-28 20:22:42.441 -08 000000069 INF: ===================Camera #2 Frame #178=================== 17-02-28 20:22:42.555 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:42.575 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183. 17-02-28 20:22:42.575 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183 17-02-28 20:22:42.575 -08 000000091 INF: ===================Camera #0 Frame #183=================== 17-02-28 20:22:42.610 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 184, frameCount = 185. 17-02-28 20:22:42.610 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 185 17-02-28 20:22:42.610 -08 000000069 INF: ===================Camera #2 Frame #185=================== 17-02-28 20:22:42.663 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:42.692 -08 000000060 INF: Y Motor: Unshifted Position: 2647436 17-02-28 20:22:42.724 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:42.742 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:42.743 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189. 17-02-28 20:22:42.743 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189 17-02-28 20:22:42.743 -08 000000091 INF: ===================Camera #0 Frame #189=================== 17-02-28 20:22:42.782 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 190, frameCount = 191. 17-02-28 20:22:42.782 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 191 17-02-28 20:22:42.782 -08 000000069 INF: ===================Camera #2 Frame #191=================== 17-02-28 20:22:42.869 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:42.911 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196. 17-02-28 20:22:42.911 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196 17-02-28 20:22:42.911 -08 000000091 INF: ===================Camera #0 Frame #196=================== 17-02-28 20:22:42.951 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 196, frameCount = 197. 17-02-28 20:22:42.951 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 197 17-02-28 20:22:42.951 -08 000000069 INF: ===================Camera #2 Frame #197=================== 17-02-28 20:22:42.974 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:43.006 -08 000000060 INF: Y Motor: Unshifted Position: 2445293 17-02-28 20:22:43.036 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:43.056 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:43.082 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202. 17-02-28 20:22:43.082 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202 17-02-28 20:22:43.082 -08 000000091 INF: ===================Camera #0 Frame #202=================== 17-02-28 20:22:43.120 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 202, frameCount = 203. 17-02-28 20:22:43.120 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 203 17-02-28 20:22:43.120 -08 000000069 INF: ===================Camera #2 Frame #203=================== 17-02-28 20:22:43.181 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:43.250 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208. 17-02-28 20:22:43.250 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208 17-02-28 20:22:43.250 -08 000000091 INF: ===================Camera #0 Frame #208=================== 17-02-28 20:22:43.286 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:43.289 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210. 17-02-28 20:22:43.289 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210 17-02-28 20:22:43.289 -08 000000069 INF: ===================Camera #2 Frame #210=================== 17-02-28 20:22:43.316 -08 000000060 INF: Y Motor: Unshifted Position: 2241624 17-02-28 20:22:43.349 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:43.366 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:43.418 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214. 17-02-28 20:22:43.418 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214 17-02-28 20:22:43.418 -08 000000091 INF: ===================Camera #0 Frame #214=================== 17-02-28 20:22:43.461 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 215, frameCount = 216. 17-02-28 20:22:43.461 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 216 17-02-28 20:22:43.461 -08 000000069 INF: ===================Camera #2 Frame #216=================== 17-02-28 20:22:43.491 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:43.586 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220. 17-02-28 20:22:43.586 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221 17-02-28 20:22:43.586 -08 000000091 INF: ===================Camera #0 Frame #221=================== 17-02-28 20:22:43.599 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:43.630 -08 000000060 INF: Y Motor: Unshifted Position: 2038827 17-02-28 20:22:43.630 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 221, frameCount = 222. 17-02-28 20:22:43.630 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 222 17-02-28 20:22:43.630 -08 000000069 INF: ===================Camera #2 Frame #222=================== 17-02-28 20:22:43.660 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:43.680 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:43.757 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227. 17-02-28 20:22:43.757 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227 17-02-28 20:22:43.757 -08 000000091 INF: ===================Camera #0 Frame #227=================== 17-02-28 20:22:43.799 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228. 17-02-28 20:22:43.799 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228 17-02-28 20:22:43.799 -08 000000069 INF: ===================Camera #2 Frame #228=================== 17-02-28 20:22:43.805 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:43.910 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:43.925 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233. 17-02-28 20:22:43.925 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233 17-02-28 20:22:43.925 -08 000000091 INF: ===================Camera #0 Frame #233=================== 17-02-28 20:22:43.942 -08 000000060 INF: Y Motor: Unshifted Position: 1836458 17-02-28 20:22:43.968 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 234, frameCount = 235. 17-02-28 20:22:43.968 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 235 17-02-28 20:22:43.968 -08 000000069 INF: ===================Camera #2 Frame #235=================== 17-02-28 20:22:43.972 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:43.992 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:44.093 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239. 17-02-28 20:22:44.093 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239 17-02-28 20:22:44.093 -08 000000091 INF: ===================Camera #0 Frame #239=================== 17-02-28 20:22:44.117 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:44.140 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 240, frameCount = 241. 17-02-28 20:22:44.140 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 241 17-02-28 20:22:44.140 -08 000000069 INF: ===================Camera #2 Frame #241=================== 17-02-28 20:22:44.222 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:44.254 -08 000000060 INF: Y Motor: Unshifted Position: 1633438 17-02-28 20:22:44.262 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245. 17-02-28 20:22:44.262 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245 17-02-28 20:22:44.262 -08 000000091 INF: ===================Camera #0 Frame #245=================== 17-02-28 20:22:44.285 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:44.304 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:44.311 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247. 17-02-28 20:22:44.311 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247 17-02-28 20:22:44.311 -08 000000069 INF: ===================Camera #2 Frame #247=================== 17-02-28 20:22:44.427 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:44.432 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252. 17-02-28 20:22:44.432 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252 17-02-28 20:22:44.432 -08 000000091 INF: ===================Camera #0 Frame #252=================== 17-02-28 20:22:44.480 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253. 17-02-28 20:22:44.480 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253 17-02-28 20:22:44.480 -08 000000069 INF: ===================Camera #2 Frame #253=================== 17-02-28 20:22:44.535 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:44.564 -08 000000060 INF: Y Motor: Unshifted Position: 1429988 17-02-28 20:22:44.597 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:44.603 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258. 17-02-28 20:22:44.603 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258 17-02-28 20:22:44.603 -08 000000091 INF: ===================Camera #0 Frame #258=================== 17-02-28 20:22:44.614 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:44.649 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 259, frameCount = 260. 17-02-28 20:22:44.649 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 260 17-02-28 20:22:44.649 -08 000000069 INF: ===================Camera #2 Frame #260=================== 17-02-28 20:22:44.739 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:44.771 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264. 17-02-28 20:22:44.771 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264 17-02-28 20:22:44.771 -08 000000091 INF: ===================Camera #0 Frame #264=================== 17-02-28 20:22:44.821 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266. 17-02-28 20:22:44.821 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266 17-02-28 20:22:44.821 -08 000000069 INF: ===================Camera #2 Frame #266=================== 17-02-28 20:22:44.847 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:44.876 -08 000000060 INF: Y Motor: Unshifted Position: 1227174 17-02-28 20:22:44.908 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:44.926 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:44.939 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270. 17-02-28 20:22:44.939 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270 17-02-28 20:22:44.939 -08 000000091 INF: ===================Camera #0 Frame #270=================== 17-02-28 20:22:44.990 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:22:44.990 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:22:44.990 -08 000000069 INF: ===================Camera #2 Frame #272=================== 17-02-28 20:22:45.012 -08 000000069 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:22:45.013 -08 000000069 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:22:45.033 -08 000000104 INF: FPGA: Recv TDIYWAIT 17-02-28 20:22:45.033 -08 000000085 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:45.034 -08 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-02-28 20:22:45.035 -08 000000035 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-02-28 20:22:45.035 -08 000000046 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-02-28 20:22:45.036 -08 000000035 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-02-28 20:22:45.036 -08 000000035 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-02-28 20:22:45.036 -08 000000035 INF: Excitation Filter 2: Moving 107 steps 17-02-28 20:22:45.036 -08 000000046 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-02-28 20:22:45.036 -08 000000046 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-02-28 20:22:45.036 -08 000000046 INF: Excitation Filter 1: Moving 107 steps 17-02-28 20:22:45.036 -08 000000035 INF: FPGA: Xmit EX2MV 107\n 17-02-28 20:22:45.037 -08 000000046 INF: FPGA: Xmit EX1MV 107\n 17-02-28 20:22:45.053 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:45.158 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:45.189 -08 000000069 INF: Camera #2 ReleaseBuffer 17-02-28 20:22:45.189 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:22:45.189 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:22:45.189 -08 000000091 INF: ===================Camera #0 Frame #272=================== 17-02-28 20:22:45.189 -08 000000069 INF: ===================Camera TDI=================== 17-02-28 20:22:45.190 -08 000000060 INF: Y Motor: Unshifted Position: 1024814 17-02-28 20:22:45.195 -08 000000091 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:22:45.196 -08 000000091 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:22:45.220 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:45.221 -08 000000069 INF: ====================================== 17-02-28 20:22:45.240 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:45.328 -08 000000091 INF: Camera #0 ReleaseBuffer 17-02-28 20:22:45.328 -08 000000091 INF: ===================Camera TDI=================== 17-02-28 20:22:45.359 -08 000000091 INF: ====================================== 17-02-28 20:22:45.361 -08 000000099 INF: ===================Camera TDI=================== 17-02-28 20:22:45.362 -08 000000099 INF: ====================================== 17-02-28 20:22:45.378 -08 000000060 INF: Y Motor: Unshifted Position: 990993 17-02-28 20:22:45.378 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:22:45.378 -08 000000060 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:45.406 -08 000000074 INF: FPGA: Recv EX2MV 17-02-28 20:22:45.406 -08 000000074 INF: FPGA: Recv EX1MV 17-02-28 20:22:45.406 -08 000000046 INF: Excitation Filter 1: Moved 107 steps in 370.1024 ms 17-02-28 20:22:45.406 -08 000000035 INF: Excitation Filter 2: Moved 107 steps in 370.259 ms 17-02-28 20:22:45.406 -08 000000046 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.2103 ms 17-02-28 20:22:45.406 -08 000000046 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.3494 ms 17-02-28 20:22:45.406 -08 000000035 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.3928 ms 17-02-28 20:22:45.406 -08 000000035 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.5685 ms 17-02-28 20:22:45.406 -08 000000046 INF: ====================================== 17-02-28 20:22:45.406 -08 000000035 INF: ====================================== 17-02-28 20:22:45.408 -08 000000085 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:45.409 -08 000000085 INF: ====================================== 17-02-28 20:22:45.439 -08 000000060 INF: Y Motor: Recv v 0\r 17-02-28 20:22:45.439 -08 000000060 INF: Y Motor: Moved to 14.9099 after 7862 ms 17-02-28 20:22:45.439 -08 000000060 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:22:45.470 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:45.500 -08 000000060 INF: Y Motor: Recv v 4097\r 17-02-28 20:22:45.500 -08 000000060 INF: Y Motor: Status After move finished OK: 17-02-28 20:22:45.500 -08 000000060 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:45.530 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:45.564 -08 000000060 INF: Y Motor: Recv v 0\r 17-02-28 20:22:45.564 -08 000000060 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:45.564 -08 000000060 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:22:45.625 -08 000000060 INF: Y Motor: Recv v 134217728\r 17-02-28 20:22:45.625 -08 000000060 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-02-28 20:22:45.625 -08 000000060 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:22:45.625 -08 000000060 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:22:45.687 -08 000000060 INF: Y Motor: Recv v 0\r 17-02-28 20:22:45.687 -08 000000060 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:22:45.687 -08 000000060 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:22:45.687 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:45.751 -08 000000060 INF: Y Motor: Recv ok\r 17-02-28 20:22:45.751 -08 000000060 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:22:45.751 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:45.780 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:45.814 -08 000000060 INF: Y Motor: Recv ok\r 17-02-28 20:22:45.814 -08 000000060 INF: ====================================== 17-02-28 20:22:45.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:45.816 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:45.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:45.817 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-02-28 20:22:45.843 -08 000000010 INF: FPGA: Recv TDICLINES 1023 17-02-28 20:22:45.843 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:22:45.844 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:45.904 -08 000000046 INF: FPGA: Recv TDIYERD 1490994 17-02-28 20:22:45.904 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-02-28 20:22:45.968 -08 000000036 INF: FPGA: Recv ZADCR 34869 17-02-28 20:22:45.968 -08 000000042 INF: At scan end Y pos = 14.910 and Z pos = -0.133. Y moved -48.539 mm 17-02-28 20:22:45.968 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-02-28 20:22:46.029 -08 000000060 INF: FPGA: Recv TDIPULSES 139265 17-02-28 20:22:46.029 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-02-28 20:22:46.029 -08 000000042 INF: TDIScan finished after 12624.5297 ms 17-02-28 20:22:46.029 -08 000000042 INF: Image[0]: Y should trigger at 63.449 mm, 2nd row was at 64.358 mm (error = 0.909 mm) 17-02-28 20:22:46.029 -08 000000042 INF: Image[2]: Y should trigger at 63.449 mm, 2nd row was at 64.358 mm (error = 0.909 mm) 17-02-28 20:22:46.031 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:46.066 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.608 um 17-02-28 20:22:46.066 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:46.067 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-02-28 20:22:46.091 -08 000000064 INF: FPGA: Recv SWOOF_RDSTAT 0 17-02-28 20:22:46.091 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:46.092 -08 000000089 INF: ===================Dither Clean Up Command=================== 17-02-28 20:22:46.092 -08 000000098 INF: ===================Set YMotor gains for fast moves=================== 17-02-28 20:22:46.092 -08 000000052 INF: ===================Set Y Motor Motor Velocity=================== 17-02-28 20:22:46.092 -08 000000062 INF: ===================Set Z Motor Motor Velocity=================== 17-02-28 20:22:46.092 -08 000000052 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:22:46.093 -08 000000052 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:22:46.093 -08 000000098 INF: ====================================== 17-02-28 20:22:46.093 -08 000000062 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-02-28 20:22:46.093 -08 000000062 INF: FPGA: Xmit ZSTEP 1288471\n 17-02-28 20:22:46.093 -08 000000046 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:22:46.093 -08 000000083 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:22:46.094 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:46.094 -08 000000046 INF: FPGA: Xmit ZSEL 0\n 17-02-28 20:22:46.096 -08 000000083 INF: ===================LFT:Extracting coords=================== 17-02-28 20:22:46.121 -08 000000083 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:22:46.122 -08 000000083 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-02-28 20:22:46.122 -08 000000085 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:46.122 -08 000000051 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:46.123 -08 000000076 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:46.123 -08 000000082 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:46.123 -08 000000085 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:22:46.123 -08 000000051 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:22:46.123 -08 000000082 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:22:46.123 -08 000000076 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:22:46.126 -08 000000052 INF: Y Motor: Recv ok\r 17-02-28 20:22:46.126 -08 000000052 INF: ====================================== 17-02-28 20:22:46.155 -08 000000105 INF: FPGA: Recv ZSTEP 17-02-28 20:22:46.155 -08 000000105 INF: FPGA: Recv ZSEL 17-02-28 20:22:46.155 -08 000000046 INF: FPGA: Xmit ZDACW 40366\n 17-02-28 20:22:46.155 -08 000000062 INF: ====================================== 17-02-28 20:22:46.156 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:46.197 -08 000000051 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:22:46.197 -08 000000082 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:22:46.197 -08 000000076 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:22:46.198 -08 000000085 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:22:46.220 -08 000000052 INF: FPGA: Recv ZDACW 17-02-28 20:22:46.220 -08 000000046 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-02-28 20:22:46.221 -08 000000046 INF: FPGA: Xmit TDIBB 0\n 17-02-28 20:22:46.281 -08 000000038 INF: FPGA: Recv TDIBB 17-02-28 20:22:46.281 -08 000000046 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:22:46.282 -08 000000046 INF: ====================================== 17-02-28 20:22:46.349 -08 000000051 INF: LFT found best fwhm score 2.000728 in 151 ms 17-02-28 20:22:46.349 -08 000000076 INF: LFT found best fwhm score 2.000031 in 151 ms 17-02-28 20:22:46.350 -08 000000076 INF: LFT found good score at index 6937 with fwhm value 2.000031. Next cycle, cycle 4 starting Z position for top surface is at -0.156 mm FC:B, C:3,L:2,T 17-02-28 20:22:46.350 -08 000000051 INF: LFT found good score at index 1565 with fwhm value 2.000728. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:2,T 17-02-28 20:22:46.350 -08 000000082 INF: LFT found best fwhm score 2.173983 in 152 ms 17-02-28 20:22:46.350 -08 000000082 INF: LFT found good score at index 2157 with fwhm value 2.173983. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:2,T 17-02-28 20:22:46.350 -08 000000051 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:46.350 -08 000000076 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:46.350 -08 000000082 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:46.350 -08 000000085 INF: LFT found best fwhm score 2.000233 in 151 ms 17-02-28 20:22:46.350 -08 000000085 INF: LFT found good score at index 6833 with fwhm value 2.000233. Next cycle, cycle 4 starting Z position for top surface is at -0.156 mm FC:B, C:3,L:2,T 17-02-28 20:22:46.350 -08 000000051 INF: ====================================== 17-02-28 20:22:46.350 -08 000000082 INF: ====================================== 17-02-28 20:22:46.350 -08 000000085 INF: ===================LookupFocusTracking=================== 17-02-28 20:22:46.351 -08 000000076 INF: ====================================== 17-02-28 20:22:46.351 -08 000000085 INF: ====================================== 17-02-28 20:22:46.352 -08 000000083 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:22:46.353 -08 000000083 INF: LFT weighted average best Z for top surface is at -0.157mm FC:B, C:3,L:2,T 17-02-28 20:22:46.353 -08 000000083 INF: ====================================== 17-02-28 20:22:46.354 -08 000000089 INF: ====================================== 17-02-28 20:22:46.355 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:46.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-02-28 20:22:46.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:46.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-02-28 20:22:46.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:46.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-02-28 20:22:46.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:46.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-02-28 20:22:46.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:46.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308=================== 17-02-28 20:22:46.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308=================== 17-02-28 20:22:46.358 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB, Waiting for image analysis=================== 17-02-28 20:22:46.358 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB=================== 17-02-28 20:22:46.358 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Waiting for image analysis=================== 17-02-28 20:22:46.358 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308=================== 17-02-28 20:22:46.381 -08 000000042 INF: Waited 23 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 0, buffer wait time 0 17-02-28 20:22:46.381 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:46.381 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:46.382 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:46.382 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-02-28 20:22:46.382 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2=================== 17-02-28 20:22:46.383 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface=================== 17-02-28 20:22:46.399 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:46.400 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:46.401 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:22:46.401 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:22:46.437 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:46.454 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":2,"Tile":1206,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF221","HCSMMF249","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.501 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:22:46.502 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:46.502 -08 000000042 INF: Compensator: Moving OutOfPath 17-02-28 20:22:46.502 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n 17-02-28 20:22:46.587 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:46.589 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":2,"Tile":1205,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF263","HCSMMF247","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.614 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":2,"Tile":1209,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF194","HCSMMF187","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.620 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":2,"Tile":1201,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF228","HCSMMF231","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.625 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":2,"Tile":1212,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF278","HCSMMF284","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.635 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":2,"Tile":1203,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF275","HCSMMF211","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.637 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":2,"Tile":1202,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF191","HCSMMF207","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.641 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":2,"Tile":1204,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF205","HCSMMF204","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.648 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":2,"Tile":1208,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF230","HCSMMF241","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.658 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":2,"Tile":1214,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF256","HCSMMF195","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.660 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":2,"Tile":1213,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF181","HCSMMF200","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.661 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":2,"Tile":1207,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF262","HCSMMF269","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.664 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":2,"Tile":1210,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF286","HCSMMF254","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.670 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":2,"Tile":1218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF238","HCSMMF226","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.676 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":2,"Tile":1215,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF213","HCSMMF273","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.682 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":2,"Tile":1216,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF189","HCSMMF266","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.682 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":2,"Tile":1219,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF219","HCSMMF282","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.684 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":2,"Tile":1211,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF201","HCSMMF264","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.685 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":2,"Tile":1222,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF198","HCSMMF270","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.686 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":2,"Tile":1217,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF227","HCSMMF258","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.686 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":2,"Tile":1221,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF265","HCSMMF190","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.687 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":2,"Tile":1220,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF246","HCSMMF287","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.688 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":2,"Tile":1227,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF243","HCSMMF220","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.689 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":2,"Tile":1224,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF180","HCSMMF285","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.690 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":2,"Tile":1228,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF252","HCSMMF209","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.691 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":2,"Tile":1226,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF276","HCSMMF271","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.691 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":2,"Tile":1223,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF216","HCSMMF202","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.692 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":2,"Tile":1225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF281","HCSMMF217","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:22:46.695 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:46.701 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-02-28 20:22:46.813 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:46.813 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-02-28 20:22:46.838 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:46.850 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:46.856 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-02-28 20:22:46.890 -08 000000060 INF: FPGA: Recv MIOCOMPR 17-02-28 20:22:46.890 -08 000000042 INF: Compensator: Moved OutOfPath in 388 ms 17-02-28 20:22:46.890 -08 000000042 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908 17-02-28 20:22:46.891 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:46.891 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:46.892 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:46.893 -08 000000104 INF: ===================Move Tilt Motor 2=================== 17-02-28 20:22:46.893 -08 000000077 INF: ===================Move Tilt Motor 3=================== 17-02-28 20:22:46.893 -08 000000062 INF: ===================Move Tilt Motor 1=================== 17-02-28 20:22:46.893 -08 000000077 INF: ====================================== 17-02-28 20:22:46.893 -08 000000062 INF: ====================================== 17-02-28 20:22:46.894 -08 000000104 INF: ====================================== 17-02-28 20:22:46.895 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:46.896 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:46.902 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm. 17-02-28 20:22:46.911 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm. 17-02-28 20:22:46.911 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-02-28 20:22:46.911 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-02-28 20:22:46.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-02-28 20:22:46.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-02-28 20:22:46.915 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0 17-02-28 20:22:46.915 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format 17-02-28 20:22:46.915 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n 17-02-28 20:22:46.944 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:46.950 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-02-28 20:22:46.953 -08 000000010 INF: FPGA: Recv ZSTEP 17-02-28 20:22:46.953 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-02-28 20:22:46.953 -08 000000042 INF: Z Motor: Entering MoveAbsStepped 17-02-28 20:22:46.953 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1540 mm 17-02-28 20:22:46.953 -08 000000042 INF: FPGA: Xmit ZTRG 0\n 17-02-28 20:22:47.014 -08 000000033 INF: FPGA: Recv ZTRG 17-02-28 20:22:47.014 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n 17-02-28 20:22:47.076 -08 000000109 INF: FPGA: Recv ZYT 17-02-28 20:22:47.076 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-02-28 20:22:47.076 -08 000000042 INF: FPGA: Xmit ZMV 60292\n 17-02-28 20:22:47.084 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:47.090 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-02-28 20:22:47.137 -08 000000091 INF: FPGA: Recv @LOG Trigger Camera 17-02-28 20:22:47.137 -08 000000091 INF: FPGA: Recv ZMV 17-02-28 20:22:47.137 -08 000000006 INF: FPGA: Trigger Camera 17-02-28 20:22:47.137 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.019 ms 17-02-28 20:22:47.137 -08 000000042 INF: FPGA: Xmit ZDACR\n 17-02-28 20:22:47.141 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:47.173 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:22:47.202 -08 000000073 INF: FPGA: Recv ZDACR 60292 17-02-28 20:22:47.202 -08 000000042 INF: Z Motor: MoveAndTrigger took 248.5724 ms w/comms 17-02-28 20:22:47.202 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:22:47.202 -08 000000042 INF: Z Motor: MoveAbsStepped took 248.764 ms 17-02-28 20:22:47.202 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-02-28 20:22:47.203 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:47.203 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm. 17-02-28 20:22:47.211 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-02-28 20:22:47.211 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:22:47.211 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:22:47.211 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format 17-02-28 20:22:47.211 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n 17-02-28 20:22:47.264 -08 000000109 INF: FPGA: Recv ZSTEP 17-02-28 20:22:47.285 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-02-28 20:22:47.285 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm. 17-02-28 20:22:47.294 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-02-28 20:22:47.294 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:22:47.294 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:22:47.296 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:47.296 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Populating image tags=================== 17-02-28 20:22:47.296 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:47.296 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = C_1 17-02-28 20:22:47.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:47.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:47.298 -08 000000045 INF: ===================MoveEmissionFilters=================== 17-02-28 20:22:47.298 -08 000000073 INF: ===================Move X,Y=================== 17-02-28 20:22:47.299 -08 000000073 INF: ===================Move X,Y, Parallel=================== 17-02-28 20:22:47.299 -08 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:22:47.299 -08 000000108 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:22:47.299 -08 000000050 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:22:47.299 -08 000000058 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:22:47.300 -08 000000074 INF: ===================Move X Motor without settling=================== 17-02-28 20:22:47.300 -08 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:22:47.300 -08 000000030 INF: ===================Move Y Motor without settling=================== 17-02-28 20:22:47.300 -08 000000074 INF: X Motor: Xmit PR VM\n 17-02-28 20:22:47.300 -08 000000108 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:22:47.300 -08 000000050 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:22:47.300 -08 000000058 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:22:47.300 -08 000000030 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9099 mm 17-02-28 20:22:47.300 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:22:47.301 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:47.301 -08 000000083 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-02-28 20:22:47.301 -08 000000033 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-02-28 20:22:47.301 -08 000000095 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-02-28 20:22:47.301 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-02-28 20:22:47.301 -08 000000069 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-02-28 20:22:47.301 -08 000000083 INF: ====================================== 17-02-28 20:22:47.301 -08 000000082 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-02-28 20:22:47.301 -08 000000072 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-02-28 20:22:47.301 -08 000000047 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-02-28 20:22:47.302 -08 000000082 INF: ====================================== 17-02-28 20:22:47.302 -08 000000047 INF: ====================================== 17-02-28 20:22:47.302 -08 000000072 INF: ====================================== 17-02-28 20:22:47.302 -08 000000087 INF: ====================================== 17-02-28 20:22:47.303 -08 000000050 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:22:47.304 -08 000000033 INF: Emission Filter 12: Remaining IntoPath 17-02-28 20:22:47.304 -08 000000033 INF: ====================================== 17-02-28 20:22:47.304 -08 000000095 INF: ====================================== 17-02-28 20:22:47.304 -08 000000069 INF: ====================================== 17-02-28 20:22:47.305 -08 000000050 INF: ====================================== 17-02-28 20:22:47.305 -08 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:22:47.305 -08 000000058 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:22:47.306 -08 000000108 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:22:47.307 -08 000000078 INF: ====================================== 17-02-28 20:22:47.307 -08 000000058 INF: ====================================== 17-02-28 20:22:47.307 -08 000000108 INF: ====================================== 17-02-28 20:22:47.308 -08 000000045 INF: ====================================== 17-02-28 20:22:47.326 -08 000000030 INF: Y Motor: Recv ok\r 17-02-28 20:22:47.326 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:22:47.326 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:47.391 -08 000000074 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-02-28 20:22:47.391 -08 000000074 INF: X Motor: Xmit PR VI\n 17-02-28 20:22:47.393 -08 000000030 INF: Y Motor: Recv ok\r 17-02-28 20:22:47.393 -08 000000030 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:47.453 -08 000000074 INF: X Motor: Recv PR VI\r\n410\r\n> 17-02-28 20:22:47.453 -08 000000030 INF: Y Motor: Recv v 0\r 17-02-28 20:22:47.453 -08 000000074 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-02-28 20:22:47.453 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:47.453 -08 000000074 INF: X Motor: Moving to 74.7156 mm @15.000 mm/sec, started at 72.4814 mm 17-02-28 20:22:47.453 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:47.453 -08 000000030 INF: Y Motor: Set target position to 5953351 encoder counts 17-02-28 20:22:47.453 -08 000000030 INF: Y Motor: Xmit s r0xca 5953351\r 17-02-28 20:22:47.453 -08 000000074 INF: X Motor: Xmit MA 6437\n 17-02-28 20:22:47.457 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-02-28 20:22:47.515 -08 000000030 INF: Y Motor: Recv ok\r 17-02-28 20:22:47.515 -08 000000074 INF: X Motor: Recv MA 6437\r\n> 17-02-28 20:22:47.515 -08 000000030 INF: Y Motor: Start the move command 17-02-28 20:22:47.515 -08 000000030 INF: Y Motor: Xmit t 1\r 17-02-28 20:22:47.515 -08 000000074 INF: X Motor: WaitUntilStopped 60149 17-02-28 20:22:47.515 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:47.577 -08 000000030 INF: Y Motor: Recv ok\r 17-02-28 20:22:47.577 -08 000000030 INF: Y Motor: WaitUntilStopped 61985 17-02-28 20:22:47.577 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:47.703 -08 000000030 INF: Y Motor: Unshifted Position: 1072130 17-02-28 20:22:47.753 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:47.766 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:47.828 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:47.878 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:48.013 -08 000000030 INF: Y Motor: Unshifted Position: 1780164 17-02-28 20:22:48.063 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:48.078 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:48.139 -08 000000074 INF: X Motor: Xmit PR ER\n 17-02-28 20:22:48.139 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:48.189 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:48.202 -08 000000074 INF: X Motor: Recv PR ER\r\n0\r\n> 17-02-28 20:22:48.202 -08 000000074 INF: X Motor: Moved to 74.7153 after 686 ms 17-02-28 20:22:48.202 -08 000000074 INF: ====================================== 17-02-28 20:22:48.326 -08 000000030 INF: Y Motor: Unshifted Position: 2557680 17-02-28 20:22:48.376 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:48.389 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:48.449 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:48.501 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:48.642 -08 000000030 INF: Y Motor: Unshifted Position: 3335952 17-02-28 20:22:48.692 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:48.699 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:48.762 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:48.813 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:48.952 -08 000000030 INF: Y Motor: Unshifted Position: 4116031 17-02-28 20:22:49.002 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:49.012 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:49.075 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:49.127 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:49.262 -08 000000030 INF: Y Motor: Unshifted Position: 4901795 17-02-28 20:22:49.312 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:49.325 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:49.385 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:49.435 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:49.576 -08 000000030 INF: Y Motor: Unshifted Position: 5677932 17-02-28 20:22:49.626 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:49.635 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:49.696 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:49.747 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:49.886 -08 000000030 INF: Y Motor: Unshifted Position: 5953353 17-02-28 20:22:49.886 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:22:49.886 -08 000000030 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:49.946 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:49.948 -08 000000030 INF: Y Motor: Recv v 0\r 17-02-28 20:22:49.948 -08 000000030 INF: Y Motor: Moved to 64.5335 after 2370 ms 17-02-28 20:22:49.948 -08 000000030 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:22:50.011 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:50.012 -08 000000030 INF: Y Motor: Recv v 4096\r 17-02-28 20:22:50.012 -08 000000030 INF: Y Motor: Status After move finished OK: 17-02-28 20:22:50.012 -08 000000030 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:50.074 -08 000000030 INF: Y Motor: Recv v 0\r 17-02-28 20:22:50.074 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:50.074 -08 000000030 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:22:50.143 -08 000000030 INF: Y Motor: Recv v 402653184\r 17-02-28 20:22:50.143 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-02-28 20:22:50.143 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:22:50.143 -08 000000030 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:22:50.199 -08 000000030 INF: Y Motor: Recv v 0\r 17-02-28 20:22:50.199 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:22:50.199 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:22:50.199 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:50.261 -08 000000030 INF: Y Motor: Recv ok\r 17-02-28 20:22:50.261 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:50.261 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:22:50.261 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:50.321 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:50.322 -08 000000030 INF: Y Motor: Recv ok\r 17-02-28 20:22:50.322 -08 000000030 INF: ====================================== 17-02-28 20:22:50.323 -08 000000073 INF: ===================Move X,Y=================== 17-02-28 20:22:50.325 -08 000000073 INF: ====================================== 17-02-28 20:22:50.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:50.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:50.327 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec 17-02-28 20:22:50.327 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r 17-02-28 20:22:50.385 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:22:50.385 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n 17-02-28 20:22:50.446 -08 000000064 INF: FPGA: Recv ZFREQCL 17-02-28 20:22:50.446 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions=================== 17-02-28 20:22:50.447 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:50.447 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:22:50.508 -08 000000033 INF: FPGA: Recv TDIYERD 6453352 17-02-28 20:22:50.508 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm) 17-02-28 20:22:50.508 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:50.509 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:50.510 -08 000000062 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:50.510 -08 000000010 INF: ===================Set YMotor gains for scans=================== 17-02-28 20:22:50.511 -08 000000062 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-02-28 20:22:50.511 -08 000000010 INF: ====================================== 17-02-28 20:22:50.511 -08 000000062 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:50.512 -08 000000062 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-02-28 20:22:50.513 -08 000000062 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-02-28 20:22:50.513 -08 000000062 INF: FPGA: Xmit TDIYPOS 6433351\n 17-02-28 20:22:50.571 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:50.571 -08 000000078 INF: FPGA: Recv TDIYPOS 17-02-28 20:22:50.572 -08 000000062 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-02-28 20:22:50.574 -08 000000062 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI=================== 17-02-28 20:22:50.574 -08 000000062 INF: FPGA: Xmit TDIYARM2 3072 1 1\n 17-02-28 20:22:50.633 -08 000000060 INF: FPGA: Recv TDIYARM2 17-02-28 20:22:50.634 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:50.634 -08 000000062 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-02-28 20:22:50.636 -08 000000062 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:50.638 -08 000000062 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-02-28 20:22:50.639 -08 000000062 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:50.641 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-02-28 20:22:50.642 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-02-28 20:22:50.643 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:22:50.884 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:50.946 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:51.015 -08 000000062 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-02-28 20:22:51.015 -08 000000062 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072 17-02-28 20:22:51.015 -08 000000062 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:22:51.031 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-02-28 20:22:51.033 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:22:51.204 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:51.257 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:51.413 -08 000000062 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-02-28 20:22:51.413 -08 000000062 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072 17-02-28 20:22:51.413 -08 000000062 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:22:51.428 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-02-28 20:22:51.430 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-02-28 20:22:51.432 -08 000000062 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:51.435 -08 000000062 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:51.436 -08 000000062 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-02-28 20:22:51.436 -08 000000062 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:51.439 -08 000000062 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-02-28 20:22:51.439 -08 000000062 INF: Z Motor: Entering ArmAbsStepped 17-02-28 20:22:51.439 -08 000000062 INF: Z Motor: Arming to move to -0.0100 mm 17-02-28 20:22:51.439 -08 000000062 INF: FPGA: Xmit ZYT 0 2\n 17-02-28 20:22:51.446 -08 000000047 INF: FPGA: Recv ZYT 17-02-28 20:22:51.446 -08 000000062 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines) 17-02-28 20:22:51.446 -08 000000062 INF: FPGA: Xmit ZARM 2621\n 17-02-28 20:22:51.506 -08 000000051 INF: FPGA: Recv ZARM 17-02-28 20:22:51.506 -08 000000062 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.9446 ms 17-02-28 20:22:51.506 -08 000000062 INF: Z Motor: ArmAbsStepped took 67.1544 ms 17-02-28 20:22:51.507 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:51.507 -08 000000062 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:51.509 -08 000000062 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:51.510 -08 000000062 INF: ====================================== 17-02-28 20:22:51.512 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:51.513 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:51.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:51.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:51.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:51.517 -08 000000077 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-02-28 20:22:51.517 -08 000000085 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-02-28 20:22:51.517 -08 000000077 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-02-28 20:22:51.517 -08 000000077 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-02-28 20:22:51.517 -08 000000077 INF: Excitation Filter 2: Moving -107 steps 17-02-28 20:22:51.517 -08 000000085 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-02-28 20:22:51.517 -08 000000085 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-02-28 20:22:51.517 -08 000000085 INF: Excitation Filter 1: Moving -107 steps 17-02-28 20:22:51.517 -08 000000077 INF: FPGA: Xmit EX2MV -107\n 17-02-28 20:22:51.518 -08 000000085 INF: FPGA: Xmit EX1MV -107\n 17-02-28 20:22:51.569 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:22:51.569 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-02-28 20:22:51.570 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-02-28 20:22:51.570 -08 000000018 INF: WaitCommand(5000) start 17-02-28 20:22:51.570 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 5 of 5 seconds left=================== 17-02-28 20:22:51.880 -08 000000037 INF: FPGA: Recv EX2MV 17-02-28 20:22:51.880 -08 000000037 INF: FPGA: Recv EX1MV 17-02-28 20:22:51.880 -08 000000085 INF: Excitation Filter 1: Moved -107 steps in 363.0142 ms 17-02-28 20:22:51.880 -08 000000077 INF: Excitation Filter 2: Moved -107 steps in 363.2301 ms 17-02-28 20:22:51.880 -08 000000085 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 363.1499 ms 17-02-28 20:22:51.880 -08 000000085 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 363.3195 ms 17-02-28 20:22:51.880 -08 000000077 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 363.3704 ms 17-02-28 20:22:51.880 -08 000000077 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 363.5756 ms 17-02-28 20:22:51.881 -08 000000085 INF: ====================================== 17-02-28 20:22:51.881 -08 000000077 INF: ====================================== 17-02-28 20:22:51.882 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:51.884 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:51.885 -08 000000062 INF: ===================Serial=================== 17-02-28 20:22:51.885 -08 000000051 INF: ===================Camera TDI=================== 17-02-28 20:22:51.886 -08 000000082 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:51.886 -08 000000104 INF: ===================Move Y Motor without settling=================== 17-02-28 20:22:51.886 -08 000000062 INF: ===================Serial, FPGA Z Wait=================== 17-02-28 20:22:51.886 -08 000000051 INF: ===================Camera TDI, Parallel=================== 17-02-28 20:22:51.886 -08 000000062 INF: FPGA: Xmit ZWAIT\n 17-02-28 20:22:51.886 -08 000000104 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm 17-02-28 20:22:51.886 -08 000000104 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:22:51.886 -08 000000104 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:51.887 -08 000000082 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-02-28 20:22:51.887 -08 000000064 INF: ===================Camera TDI=================== 17-02-28 20:22:51.887 -08 000000035 INF: ===================Camera TDI=================== 17-02-28 20:22:51.888 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:51.888 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:51.889 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:51.889 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:51.891 -08 000000082 INF: FPGA: Xmit TDIYWAIT\n 17-02-28 20:22:51.944 -08 000000104 INF: Y Motor: Recv ok\r 17-02-28 20:22:51.944 -08 000000104 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:22:51.944 -08 000000104 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:52.006 -08 000000104 INF: Y Motor: Recv ok\r 17-02-28 20:22:52.006 -08 000000104 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:52.038 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:52.038 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:52.039 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:52.039 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:52.072 -08 000000104 INF: Y Motor: Recv v 0\r 17-02-28 20:22:52.072 -08 000000104 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:52.072 -08 000000104 INF: Y Motor: Set target position to 5797042 encoder counts 17-02-28 20:22:52.072 -08 000000104 INF: Y Motor: Xmit s r0xca 5797042\r 17-02-28 20:22:52.131 -08 000000104 INF: Y Motor: Recv ok\r 17-02-28 20:22:52.131 -08 000000104 INF: Y Motor: Start the move command 17-02-28 20:22:52.131 -08 000000104 INF: Y Motor: Xmit t 1\r 17-02-28 20:22:52.188 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:52.188 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:52.189 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:52.189 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:52.193 -08 000000104 INF: Y Motor: Recv ok\r 17-02-28 20:22:52.193 -08 000000104 INF: Y Motor: WaitUntilStopped 61042 17-02-28 20:22:52.193 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:52.320 -08 000000104 INF: Y Motor: Unshifted Position: 5934882 17-02-28 20:22:52.338 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:52.338 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:52.339 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:52.339 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:52.370 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:52.488 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-02-28 20:22:52.488 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-02-28 20:22:52.488 -08 000000064 INF: ===================Camera #2 Frame #1=================== 17-02-28 20:22:52.489 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-02-28 20:22:52.489 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-02-28 20:22:52.489 -08 000000035 INF: ===================Camera #0 Frame #1=================== 17-02-28 20:22:52.494 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:52.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-02-28 20:22:52.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 4 of 5 seconds left=================== 17-02-28 20:22:52.630 -08 000000104 INF: Y Motor: Unshifted Position: 5888380 17-02-28 20:22:52.643 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-02-28 20:22:52.643 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-02-28 20:22:52.643 -08 000000064 INF: ===================Camera #2 Frame #3=================== 17-02-28 20:22:52.644 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-02-28 20:22:52.644 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-02-28 20:22:52.644 -08 000000035 INF: ===================Camera #0 Frame #3=================== 17-02-28 20:22:52.680 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:52.800 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-02-28 20:22:52.800 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-02-28 20:22:52.800 -08 000000035 INF: ===================Camera #0 Frame #4=================== 17-02-28 20:22:52.803 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-02-28 20:22:52.803 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4 17-02-28 20:22:52.803 -08 000000064 INF: ===================Camera #2 Frame #4=================== 17-02-28 20:22:52.805 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:52.944 -08 000000104 INF: Y Motor: Unshifted Position: 5841223 17-02-28 20:22:52.955 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:22:52.955 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:22:52.955 -08 000000035 INF: ===================Camera #0 Frame #5=================== 17-02-28 20:22:52.958 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:22:52.958 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:22:52.958 -08 000000064 INF: ===================Camera #2 Frame #5=================== 17-02-28 20:22:52.994 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:53.004 -08 000000109 INF: FPGA: Recv ZWAIT 17-02-28 20:22:53.004 -08 000000109 INF: FPGA: Recv TDIYWAIT 17-02-28 20:22:53.004 -08 000000062 INF: ===================Serial=================== 17-02-28 20:22:53.005 -08 000000082 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:53.006 -08 000000062 INF: ===================Serial, Confirm position Z Motor=================== 17-02-28 20:22:53.006 -08 000000062 INF: ===================Serial=================== 17-02-28 20:22:53.007 -08 000000082 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-02-28 20:22:53.008 -08 000000062 INF: ====================================== 17-02-28 20:22:53.008 -08 000000072 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-02-28 20:22:53.008 -08 000000060 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-02-28 20:22:53.008 -08 000000072 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-02-28 20:22:53.008 -08 000000072 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-02-28 20:22:53.008 -08 000000072 INF: Excitation Filter 2: Moving 107 steps 17-02-28 20:22:53.008 -08 000000072 INF: FPGA: Xmit EX2MV 107\n 17-02-28 20:22:53.009 -08 000000060 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-02-28 20:22:53.009 -08 000000060 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-02-28 20:22:53.009 -08 000000060 INF: Excitation Filter 1: Moving 107 steps 17-02-28 20:22:53.010 -08 000000060 INF: FPGA: Xmit EX1MV 107\n 17-02-28 20:22:53.108 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-02-28 20:22:53.108 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-02-28 20:22:53.108 -08 000000035 INF: ===================Camera #0 Frame #6=================== 17-02-28 20:22:53.111 -08 000000035 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-02-28 20:22:53.112 -08 000000035 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:22:53.118 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:53.139 -08 000000035 INF: Camera #0 ReleaseBuffer 17-02-28 20:22:53.139 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-02-28 20:22:53.139 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-02-28 20:22:53.139 -08 000000035 INF: ===================Camera TDI=================== 17-02-28 20:22:53.140 -08 000000064 INF: ===================Camera #2 Frame #6=================== 17-02-28 20:22:53.141 -08 000000035 INF: ====================================== 17-02-28 20:22:53.143 -08 000000064 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-02-28 20:22:53.144 -08 000000064 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:22:53.170 -08 000000064 INF: Camera #2 ReleaseBuffer 17-02-28 20:22:53.170 -08 000000064 INF: ===================Camera TDI=================== 17-02-28 20:22:53.171 -08 000000064 INF: ====================================== 17-02-28 20:22:53.173 -08 000000051 INF: ===================Camera TDI=================== 17-02-28 20:22:53.174 -08 000000051 INF: ====================================== 17-02-28 20:22:53.254 -08 000000104 INF: Y Motor: Unshifted Position: 5797061 17-02-28 20:22:53.304 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:53.379 -08 000000039 INF: FPGA: Recv EX2MV 17-02-28 20:22:53.379 -08 000000039 INF: FPGA: Recv EX1MV 17-02-28 20:22:53.379 -08 000000060 INF: Excitation Filter 1: Moved 107 steps in 370.324 ms 17-02-28 20:22:53.379 -08 000000060 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.4978 ms 17-02-28 20:22:53.379 -08 000000060 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.6179 ms 17-02-28 20:22:53.379 -08 000000072 INF: Excitation Filter 2: Moved 107 steps in 370.83 ms 17-02-28 20:22:53.379 -08 000000072 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.9711 ms 17-02-28 20:22:53.379 -08 000000072 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.1087 ms 17-02-28 20:22:53.380 -08 000000060 INF: ====================================== 17-02-28 20:22:53.380 -08 000000072 INF: ====================================== 17-02-28 20:22:53.381 -08 000000082 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:53.382 -08 000000082 INF: ====================================== 17-02-28 20:22:53.443 -08 000000104 INF: Y Motor: Unshifted Position: 5797042 17-02-28 20:22:53.443 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:22:53.443 -08 000000104 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:53.506 -08 000000104 INF: Y Motor: Recv v 0\r 17-02-28 20:22:53.506 -08 000000104 INF: Y Motor: Moved to 62.9704 after 1313 ms 17-02-28 20:22:53.506 -08 000000104 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:22:53.570 -08 000000104 INF: Y Motor: Recv v 4097\r 17-02-28 20:22:53.570 -08 000000104 INF: Y Motor: Status After move finished OK: 17-02-28 20:22:53.570 -08 000000104 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:53.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-02-28 20:22:53.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 3 of 5 seconds left=================== 17-02-28 20:22:53.630 -08 000000104 INF: Y Motor: Recv v 0\r 17-02-28 20:22:53.630 -08 000000104 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:53.630 -08 000000104 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:22:53.692 -08 000000104 INF: Y Motor: Recv v 134217728\r 17-02-28 20:22:53.692 -08 000000104 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-02-28 20:22:53.692 -08 000000104 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:22:53.692 -08 000000104 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:22:53.754 -08 000000104 INF: Y Motor: Recv v 0\r 17-02-28 20:22:53.754 -08 000000104 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:22:53.754 -08 000000104 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:22:53.754 -08 000000104 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:53.816 -08 000000104 INF: Y Motor: Recv ok\r 17-02-28 20:22:53.816 -08 000000104 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:22:53.816 -08 000000104 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:53.879 -08 000000104 INF: Y Motor: Recv ok\r 17-02-28 20:22:53.879 -08 000000104 INF: ====================================== 17-02-28 20:22:53.880 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:53.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:53.882 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:53.882 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-02-28 20:22:53.938 -08 000000109 INF: FPGA: Recv TDICLINES 1023 17-02-28 20:22:53.938 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:22:54.003 -08 000000072 INF: FPGA: Recv TDIYERD 6297044 17-02-28 20:22:54.003 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-02-28 20:22:54.065 -08 000000069 INF: FPGA: Recv ZADCR 2428 17-02-28 20:22:54.065 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm 17-02-28 20:22:54.065 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-02-28 20:22:54.127 -08 000000091 INF: FPGA: Recv TDIPULSES 3073 17-02-28 20:22:54.127 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072 17-02-28 20:22:54.127 -08 000000042 INF: TDIScan finished after 6842.4995 ms 17-02-28 20:22:54.127 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-02-28 20:22:54.127 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-02-28 20:22:54.128 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-02-28 20:22:54.191 -08 000000051 INF: FPGA: Recv SWOOF_RDSTAT 0 17-02-28 20:22:54.193 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:54.193 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:54.194 -08 000000039 INF: ===================Set YMotor gains for fast moves=================== 17-02-28 20:22:54.194 -08 000000023 INF: ===================Set Y Motor Motor Velocity=================== 17-02-28 20:22:54.194 -08 000000082 INF: ===================Set Z Motor Motor Velocity=================== 17-02-28 20:22:54.194 -08 000000023 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:22:54.194 -08 000000023 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:22:54.194 -08 000000039 INF: ====================================== 17-02-28 20:22:54.195 -08 000000082 INF: ====================================== 17-02-28 20:22:54.253 -08 000000023 INF: Y Motor: Recv ok\r 17-02-28 20:22:54.253 -08 000000023 INF: ====================================== 17-02-28 20:22:54.254 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:54.255 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:54.256 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(A)=================== 17-02-28 20:22:54.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:54.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(G)=================== 17-02-28 20:22:54.342 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:54.342 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(T)=================== 17-02-28 20:22:54.384 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:54.384 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(C)=================== 17-02-28 20:22:54.415 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:22:54.415 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-02-28 20:22:54.416 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-02-28 20:22:54.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, ETF: Extracting coords=================== 17-02-28 20:22:54.424 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-02-28 20:22:54.425 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point=================== 17-02-28 20:22:54.425 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point, Extracting metrics=================== 17-02-28 20:22:54.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-02-28 20:22:54.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 2 of 5 seconds left=================== 17-02-28 20:22:55.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point=================== 17-02-28 20:22:55.134 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.086905878476007Best Z position at top surface = -0.158569291997262Best Z position at top surface + compensator offset = -0.135869291997262 C:3,L:3,T 17-02-28 20:22:55.135 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.158569291997262 17-02-28 20:22:55.135 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97003 17-02-28 20:22:55.135 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.086905878476007 17-02-28 20:22:55.135 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.62504 17-02-28 20:22:55.135 -08 000000042 INF: Z-height at LaneTopSurface is -0.158569291997262. 17-02-28 20:22:55.135 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-02-28 20:22:55.268 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-02-28 20:22:55.268 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n 17-02-28 20:22:55.311 -08 000000074 INF: FPGA: Recv ZSTEP 17-02-28 20:22:55.311 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1=================== 17-02-28 20:22:55.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:55.313 -08 000000042 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908 17-02-28 20:22:55.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:55.314 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:55.315 -08 000000030 INF: ===================Move Tilt Motor 1=================== 17-02-28 20:22:55.315 -08 000000095 INF: ===================Move Tilt Motor 2=================== 17-02-28 20:22:55.315 -08 000000046 INF: ===================Move Tilt Motor 3=================== 17-02-28 20:22:55.315 -08 000000030 INF: ====================================== 17-02-28 20:22:55.315 -08 000000046 INF: ====================================== 17-02-28 20:22:55.316 -08 000000095 INF: ====================================== 17-02-28 20:22:55.317 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:55.318 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:55.318 -08 000000042 INF: ETF Best Z: -0.1358693 mm (35617 DAC) 17-02-28 20:22:55.318 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:55.319 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:55.319 -08 000000042 INF: Compensator: Moving IntoPath 17-02-28 20:22:55.319 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n 17-02-28 20:22:55.764 -08 000000059 INF: FPGA: Recv MIOCOMPF 17-02-28 20:22:55.764 -08 000000042 INF: Compensator: Moved IntoPath in 445 ms 17-02-28 20:22:55.764 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-02-28 20:22:55.765 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:55.765 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 1 of 5 seconds left=================== 17-02-28 20:22:55.766 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:22:55.772 -08 000000042 INF: Swath 1 position calculated to be: {X=74.16164, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface 17-02-28 20:22:55.772 -08 000000042 INF: Swath 2 position calculated to be: {X=75.26964, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface 17-02-28 20:22:55.778 -08 000000042 INF: Swath 0: Converted transform from (-42.33193, 12.56892) pixels to (-0.01449, 0.004485) mm. 17-02-28 20:22:55.783 -08 000000042 INF: Swath 1: Converted transform from (-57.45794, 12.42819) pixels to (-0.019665, 0.00414) mm. 17-02-28 20:22:55.784 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308=================== 17-02-28 20:22:55.784 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308=================== 17-02-28 20:22:55.784 -08 000000042 INF: Transformed XStagePosition from 74.16164 mm to 74.1471463525668 mm. 17-02-28 20:22:55.796 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5575743553937 mm. 17-02-28 20:22:55.796 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3575743553937 mm. 17-02-28 20:22:55.796 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4483243553936 mm. 17-02-28 20:22:55.798 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:55.798 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-02-28 20:22:55.798 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:55.798 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = C_1 17-02-28 20:22:55.807 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:55.807 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:55.808 -08 000000069 INF: ===================MoveEmissionFilters=================== 17-02-28 20:22:55.808 -08 000000074 INF: ===================Move X,Y=================== 17-02-28 20:22:55.808 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:22:55.809 -08 000000074 INF: ===================Move X,Y, Parallel=================== 17-02-28 20:22:55.809 -08 000000050 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:22:55.809 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-02-28 20:22:55.809 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:22:55.809 -08 000000046 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:22:55.809 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:22:55.809 -08 000000091 INF: ===================Move X Motor without settling=================== 17-02-28 20:22:55.810 -08 000000098 INF: ===================Move Y Motor without settling=================== 17-02-28 20:22:55.810 -08 000000050 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:22:55.810 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:22:55.810 -08 000000098 INF: Y Motor: Moving to 64.5576 mm @25.000 mm/sec, started at 62.9704 mm 17-02-28 20:22:55.810 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:22:55.810 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:22:55.810 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:55.810 -08 000000091 INF: X Motor: Xmit PR VM\n 17-02-28 20:22:55.810 -08 000000046 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:22:55.811 -08 000000109 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-02-28 20:22:55.811 -08 000000060 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-02-28 20:22:55.811 -08 000000066 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-02-28 20:22:55.811 -08 000000109 INF: Emission Filter 12: Remaining IntoPath 17-02-28 20:22:55.811 -08 000000085 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-02-28 20:22:55.811 -08 000000058 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-02-28 20:22:55.811 -08 000000037 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-02-28 20:22:55.811 -08 000000085 INF: ====================================== 17-02-28 20:22:55.811 -08 000000010 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-02-28 20:22:55.811 -08 000000099 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-02-28 20:22:55.812 -08 000000066 INF: ====================================== 17-02-28 20:22:55.812 -08 000000010 INF: ====================================== 17-02-28 20:22:55.812 -08 000000099 INF: ====================================== 17-02-28 20:22:55.812 -08 000000060 INF: ====================================== 17-02-28 20:22:55.813 -08 000000037 INF: ====================================== 17-02-28 20:22:55.813 -08 000000035 INF: Z Motor: Entering MoveAbsStepped 17-02-28 20:22:55.813 -08 000000035 INF: Z Motor: Moving to -0.1559 mm, started at -0.0100 mm 17-02-28 20:22:55.813 -08 000000035 INF: FPGA: Xmit ZTRG 0\n 17-02-28 20:22:55.813 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:22:55.813 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:22:55.814 -08 000000109 INF: ====================================== 17-02-28 20:22:55.814 -08 000000058 INF: ====================================== 17-02-28 20:22:55.814 -08 000000095 INF: ====================================== 17-02-28 20:22:55.814 -08 000000030 INF: ====================================== 17-02-28 20:22:55.815 -08 000000050 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:22:55.815 -08 000000046 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:22:55.816 -08 000000050 INF: ====================================== 17-02-28 20:22:55.817 -08 000000046 INF: ====================================== 17-02-28 20:22:55.817 -08 000000069 INF: ====================================== 17-02-28 20:22:55.827 -08 000000047 INF: FPGA: Recv ZTRG 17-02-28 20:22:55.827 -08 000000035 INF: FPGA: Xmit ZYT 0 3\n 17-02-28 20:22:55.888 -08 000000109 INF: FPGA: Recv ZYT 17-02-28 20:22:55.888 -08 000000035 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-02-28 20:22:55.888 -08 000000035 INF: FPGA: Xmit ZMV 40860\n 17-02-28 20:22:55.890 -08 000000091 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-02-28 20:22:55.890 -08 000000091 INF: X Motor: Xmit PR VI\n 17-02-28 20:22:55.890 -08 000000098 INF: Y Motor: Recv ok\r 17-02-28 20:22:55.890 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:22:55.890 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:55.953 -08 000000033 INF: FPGA: Recv @LOG Trigger Camera 17-02-28 20:22:55.953 -08 000000006 INF: FPGA: Trigger Camera 17-02-28 20:22:55.955 -08 000000098 INF: Y Motor: Recv ok\r 17-02-28 20:22:55.955 -08 000000098 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:55.955 -08 000000091 INF: X Motor: Recv PR VI\r\n410\r\n> 17-02-28 20:22:55.955 -08 000000091 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-02-28 20:22:55.955 -08 000000091 INF: X Motor: Moving to 74.1471 mm @15.000 mm/sec, started at 74.7153 mm 17-02-28 20:22:55.955 -08 000000091 INF: X Motor: Xmit MA 6204\n 17-02-28 20:22:56.017 -08 000000091 INF: X Motor: Recv MA 6204\r\n> 17-02-28 20:22:56.017 -08 000000098 INF: Y Motor: Recv v 0\r 17-02-28 20:22:56.017 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:56.017 -08 000000091 INF: X Motor: WaitUntilStopped 60038 17-02-28 20:22:56.017 -08 000000098 INF: Y Motor: Set target position to 5955757 encoder counts 17-02-28 20:22:56.017 -08 000000098 INF: Y Motor: Xmit s r0xca 5955757\r 17-02-28 20:22:56.077 -08 000000073 INF: FPGA: Recv ZMV 17-02-28 20:22:56.077 -08 000000035 INF: Z Motor: MoveAndTrigger 'ZMV' command took 188.8581 ms 17-02-28 20:22:56.077 -08 000000035 INF: FPGA: Xmit ZDACR\n 17-02-28 20:22:56.079 -08 000000098 INF: Y Motor: Recv ok\r 17-02-28 20:22:56.079 -08 000000098 INF: Y Motor: Start the move command 17-02-28 20:22:56.079 -08 000000098 INF: Y Motor: Xmit t 1\r 17-02-28 20:22:56.139 -08 000000108 INF: FPGA: Recv ZDACR 40860 17-02-28 20:22:56.139 -08 000000035 INF: Z Motor: MoveAndTrigger took 326.2357 ms w/comms 17-02-28 20:22:56.139 -08 000000035 INF: Z Motor: After move to -0.1559, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:22:56.139 -08 000000035 INF: Z Motor: MoveAbsStepped took 326.3958 ms 17-02-28 20:22:56.139 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:22:56.141 -08 000000098 INF: Y Motor: Recv ok\r 17-02-28 20:22:56.141 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-02-28 20:22:56.141 -08 000000098 INF: Y Motor: WaitUntilStopped 60063 17-02-28 20:22:56.141 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:56.142 -08 000000072 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:56.142 -08 000000064 INF: ===================Camera Arm TDI=================== 17-02-28 20:22:56.142 -08 000000072 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:56.143 -08 000000064 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:22:56.143 -08 000000072 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:22:56.143 -08 000000064 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:22:56.143 -08 000000072 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:22:56.144 -08 000000072 INF: FPGA: Xmit ZSEL 3\n 17-02-28 20:22:56.201 -08 000000101 INF: FPGA: Recv ZSEL 17-02-28 20:22:56.202 -08 000000072 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:22:56.202 -08 000000072 INF: FPGA: Xmit TDIBB 1\n 17-02-28 20:22:56.263 -08 000000077 INF: FPGA: Recv TDIBB 17-02-28 20:22:56.263 -08 000000072 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:22:56.264 -08 000000072 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:22:56.265 -08 000000098 INF: Y Motor: Unshifted Position: 5878115 17-02-28 20:22:56.265 -08 000000072 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:56.266 -08 000000072 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-02-28 20:22:56.266 -08 000000072 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-02-28 20:22:56.267 -08 000000072 INF: FPGA: Xmit ZSTEP 1792263\n 17-02-28 20:22:56.316 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:56.326 -08 000000087 INF: FPGA: Recv ZSTEP 17-02-28 20:22:56.326 -08 000000072 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:56.328 -08 000000072 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-02-28 20:22:56.328 -08 000000072 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:56.330 -08 000000072 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-02-28 20:22:56.330 -08 000000072 INF: Z Motor: Entering ArmAbsStepped 17-02-28 20:22:56.330 -08 000000072 INF: Z Motor: Arming to move to -0.1159 mm 17-02-28 20:22:56.330 -08 000000072 INF: FPGA: Xmit ZYT 6435757 4\n 17-02-28 20:22:56.391 -08 000000059 INF: FPGA: Recv ZYT 17-02-28 20:22:56.391 -08 000000072 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6378115 enc / 63.781 mm / ) = 6435757 enc / 64.358 mm 17-02-28 20:22:56.391 -08 000000072 INF: FPGA: Xmit ZARM 30374\n 17-02-28 20:22:56.443 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:56.453 -08 000000082 INF: FPGA: Recv ZARM 17-02-28 20:22:56.453 -08 000000072 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8085 ms 17-02-28 20:22:56.453 -08 000000072 INF: Z Motor: ArmAbsStepped took 123.0464 ms 17-02-28 20:22:56.454 -08 000000072 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:22:56.455 -08 000000091 INF: X Motor: Xmit PR ER\n 17-02-28 20:22:56.455 -08 000000072 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:56.456 -08 000000072 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-02-28 20:22:56.457 -08 000000072 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:56.458 -08 000000072 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-02-28 20:22:56.459 -08 000000072 INF: ===================TDI Scan Setup=================== 17-02-28 20:22:56.460 -08 000000072 INF: ====================================== 17-02-28 20:22:56.518 -08 000000091 INF: X Motor: Recv PR ER\r\n0\r\n> 17-02-28 20:22:56.518 -08 000000091 INF: X Motor: Moved to 74.1465 after 500 ms 17-02-28 20:22:56.518 -08 000000091 INF: ====================================== 17-02-28 20:22:56.573 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-02-28 20:22:56.573 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-02-28 20:22:56.573 -08 000000018 INF: WaitCommand(5000) end 17-02-28 20:22:56.573 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-02-28 20:22:56.579 -08 000000098 INF: Y Motor: Unshifted Position: 5955758 17-02-28 20:22:56.579 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:22:56.579 -08 000000098 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:56.641 -08 000000098 INF: Y Motor: Recv v 0\r 17-02-28 20:22:56.641 -08 000000098 INF: Y Motor: Moved to 64.5576 after 499 ms 17-02-28 20:22:56.641 -08 000000098 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:22:56.670 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:22:56.703 -08 000000098 INF: Y Motor: Recv v 4096\r 17-02-28 20:22:56.703 -08 000000098 INF: Y Motor: Status After move finished OK: 17-02-28 20:22:56.703 -08 000000098 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:56.764 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF) 17-02-28 20:22:56.764 -08 000000018 INF: Current Position of Pump is: 15360 17-02-28 20:22:56.765 -08 000000098 INF: Y Motor: Recv v 0\r 17-02-28 20:22:56.765 -08 000000098 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:56.765 -08 000000098 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:22:56.828 -08 000000098 INF: Y Motor: Recv v 402653184\r 17-02-28 20:22:56.828 -08 000000098 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-02-28 20:22:56.828 -08 000000098 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:22:56.828 -08 000000098 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:22:56.864 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:22:56.891 -08 000000098 INF: Y Motor: Recv v 0\r 17-02-28 20:22:56.891 -08 000000098 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:22:56.891 -08 000000098 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:22:56.891 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:56.894 -08 000000078 INF: RunCopyService queue size at 2/28/2017 8:22:56 PM is 2 17-02-28 20:22:56.951 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF) 17-02-28 20:22:56.951 -08 000000018 INF: Current Position of Pump is: 15360 17-02-28 20:22:56.951 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Dispensing port PortC=================== 17-02-28 20:22:56.953 -08 000000098 INF: Y Motor: Recv ok\r 17-02-28 20:22:56.953 -08 000000098 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:22:56.953 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:57.018 -08 000000098 INF: Y Motor: Recv ok\r 17-02-28 20:22:57.018 -08 000000098 INF: ====================================== 17-02-28 20:22:57.019 -08 000000074 INF: ===================Move X,Y=================== 17-02-28 20:22:57.020 -08 000000074 INF: ====================================== 17-02-28 20:22:57.051 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD15360R\r 17-02-28 20:22:57.069 -08 000000064 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:22:57.070 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:22:57.070 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:22:57.085 -08 000000064 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:22:57.087 -08 000000064 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:22:57.140 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:57.240 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:57.326 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:57.576 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:57.639 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:57.889 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:57.951 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:58.105 -08 000000064 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:22:58.105 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:22:58.106 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:22:58.121 -08 000000064 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:22:58.123 -08 000000064 INF: ===================Camera Arm TDI=================== 17-02-28 20:22:58.124 -08 000000064 INF: ====================================== 17-02-28 20:22:58.125 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:22:58.126 -08 000000035 INF: ====================================== 17-02-28 20:22:58.127 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:22:58.128 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:58.128 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-02-28 20:22:58.128 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-02-28 20:22:58.201 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:58.202 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:22:58.202 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-02-28 20:22:58.260 -08 000000098 INF: FPGA: Recv ZFREQCL 17-02-28 20:22:58.260 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-02-28 20:22:58.260 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:58.261 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:22:58.261 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:58.326 -08 000000074 INF: FPGA: Recv TDIYERD 6455758 17-02-28 20:22:58.326 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455758 counts (64.558 mm) 17-02-28 20:22:58.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:58.327 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:58.327 -08 000000073 INF: ===================TDI FPGA Arm=================== 17-02-28 20:22:58.327 -08 000000091 INF: ===================Set YMotor gains for scans=================== 17-02-28 20:22:58.328 -08 000000091 INF: ====================================== 17-02-28 20:22:58.328 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:22:58.329 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-02-28 20:22:58.329 -08 000000073 INF: FPGA: Xmit TDIYPOS 6344832\n 17-02-28 20:22:58.387 -08 000000085 INF: FPGA: Recv TDIYPOS 17-02-28 20:22:58.387 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:22:58.389 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-02-28 20:22:58.389 -08 000000073 INF: FPGA: Xmit TDIYARM3 139264 6435757 1 1\n 17-02-28 20:22:58.451 -08 000000050 INF: FPGA: Recv TDIYARM3 17-02-28 20:22:58.452 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:22:58.453 -08 000000073 INF: ===================TDI FPGA Arm=================== 17-02-28 20:22:58.454 -08 000000073 INF: ====================================== 17-02-28 20:22:58.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:22:58.456 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:22:58.456 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:58.456 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:58.457 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:58.457 -08 000000039 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-02-28 20:22:58.457 -08 000000099 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-02-28 20:22:58.458 -08 000000039 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-02-28 20:22:58.458 -08 000000039 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-02-28 20:22:58.458 -08 000000039 INF: Excitation Filter 2: Moving -107 steps 17-02-28 20:22:58.458 -08 000000039 INF: FPGA: Xmit EX2MV -107\n 17-02-28 20:22:58.458 -08 000000099 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-02-28 20:22:58.458 -08 000000099 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-02-28 20:22:58.458 -08 000000099 INF: Excitation Filter 1: Moving -107 steps 17-02-28 20:22:58.459 -08 000000099 INF: FPGA: Xmit EX1MV -107\n 17-02-28 20:22:58.511 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:58.574 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:58.824 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:58.884 -08 000000066 INF: FPGA: Recv EX2MV 17-02-28 20:22:58.884 -08 000000066 INF: FPGA: Recv EX1MV 17-02-28 20:22:58.884 -08 000000099 INF: Excitation Filter 1: Moved -107 steps in 425.988 ms 17-02-28 20:22:58.884 -08 000000099 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 426.0826 ms 17-02-28 20:22:58.884 -08 000000099 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 426.1864 ms 17-02-28 20:22:58.884 -08 000000039 INF: Excitation Filter 2: Moved -107 steps in 426.2092 ms 17-02-28 20:22:58.884 -08 000000039 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 426.4095 ms 17-02-28 20:22:58.884 -08 000000039 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 426.4776 ms 17-02-28 20:22:58.884 -08 000000099 INF: ====================================== 17-02-28 20:22:58.884 -08 000000039 INF: ====================================== 17-02-28 20:22:58.885 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:58.885 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:58.887 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:22:58.887 -08 000000108 INF: ===================Camera TDI=================== 17-02-28 20:22:58.887 -08 000000046 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:22:58.887 -08 000000059 INF: ===================FPGA Z Wait=================== 17-02-28 20:22:58.887 -08 000000091 INF: ===================Move Y Motor without settling=================== 17-02-28 20:22:58.888 -08 000000059 INF: FPGA: Xmit ZWAIT\n 17-02-28 20:22:58.888 -08 000000091 INF: Y Motor: Moving to 14.9092 mm @6.500 mm/sec, started at 64.5576 mm 17-02-28 20:22:58.888 -08 000000091 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:22:58.888 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:22:58.888 -08 000000108 INF: ===================Camera TDI, Parallel=================== 17-02-28 20:22:58.888 -08 000000046 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-02-28 20:22:58.889 -08 000000058 INF: ===================Camera TDI=================== 17-02-28 20:22:58.889 -08 000000105 INF: ===================Camera TDI=================== 17-02-28 20:22:58.889 -08 000000046 INF: FPGA: Xmit TDIYWAIT\n 17-02-28 20:22:58.891 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:58.891 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:58.891 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:58.891 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:58.951 -08 000000091 INF: Y Motor: Recv ok\r 17-02-28 20:22:58.951 -08 000000091 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:22:58.951 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:22:59.013 -08 000000091 INF: Y Motor: Recv ok\r 17-02-28 20:22:59.013 -08 000000091 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:22:59.041 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:59.041 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:59.041 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:59.041 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:59.075 -08 000000091 INF: Y Motor: Recv v 0\r 17-02-28 20:22:59.075 -08 000000091 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:22:59.075 -08 000000091 INF: Y Motor: Set target position to 990924 encoder counts 17-02-28 20:22:59.075 -08 000000091 INF: Y Motor: Xmit s r0xca 990924\r 17-02-28 20:22:59.135 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:59.137 -08 000000091 INF: Y Motor: Recv ok\r 17-02-28 20:22:59.137 -08 000000091 INF: Y Motor: Start the move command 17-02-28 20:22:59.137 -08 000000091 INF: Y Motor: Xmit t 1\r 17-02-28 20:22:59.191 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:59.191 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:22:59.191 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:59.191 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:22:59.198 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:22:59.199 -08 000000091 INF: Y Motor: Recv ok\r 17-02-28 20:22:59.199 -08 000000091 INF: Y Motor: WaitUntilStopped 67638 17-02-28 20:22:59.199 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:59.259 -08 000000072 INF: FPGA: Recv ZWAIT 17-02-28 20:22:59.259 -08 000000059 INF: ====================================== 17-02-28 20:22:59.323 -08 000000091 INF: Y Motor: Unshifted Position: 5893903 17-02-28 20:22:59.341 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-02-28 20:22:59.341 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4. 17-02-28 20:22:59.341 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:22:59.341 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:22:59.341 -08 000000105 INF: ===================Camera #2 Frame #5=================== 17-02-28 20:22:59.341 -08 000000058 INF: ===================Camera #0 Frame #5=================== 17-02-28 20:22:59.373 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:59.448 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:22:59.501 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:59.506 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-02-28 20:22:59.506 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-02-28 20:22:59.506 -08 000000058 INF: ===================Camera #0 Frame #11=================== 17-02-28 20:22:59.507 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-02-28 20:22:59.507 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-02-28 20:22:59.507 -08 000000105 INF: ===================Camera #2 Frame #11=================== 17-02-28 20:22:59.511 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:22:59.511 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)=================== 17-02-28 20:22:59.511 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-02-28 20:22:59.636 -08 000000091 INF: Y Motor: Unshifted Position: 5690241 17-02-28 20:22:59.674 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-02-28 20:22:59.674 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-02-28 20:22:59.674 -08 000000058 INF: ===================Camera #0 Frame #17=================== 17-02-28 20:22:59.676 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-02-28 20:22:59.676 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-02-28 20:22:59.676 -08 000000105 INF: ===================Camera #2 Frame #17=================== 17-02-28 20:22:59.686 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:59.810 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:22:59.842 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-02-28 20:22:59.842 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-02-28 20:22:59.842 -08 000000058 INF: ===================Camera #0 Frame #23=================== 17-02-28 20:22:59.845 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-02-28 20:22:59.845 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-02-28 20:22:59.845 -08 000000105 INF: ===================Camera #2 Frame #23=================== 17-02-28 20:22:59.951 -08 000000091 INF: Y Motor: Unshifted Position: 5486579 17-02-28 20:23:00.001 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:00.010 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-02-28 20:23:00.010 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-02-28 20:23:00.010 -08 000000058 INF: ===================Camera #0 Frame #29=================== 17-02-28 20:23:00.014 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-02-28 20:23:00.014 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-02-28 20:23:00.014 -08 000000105 INF: ===================Camera #2 Frame #29=================== 17-02-28 20:23:00.123 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:00.179 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35. 17-02-28 20:23:00.179 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35 17-02-28 20:23:00.179 -08 000000058 INF: ===================Camera #0 Frame #35=================== 17-02-28 20:23:00.183 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35. 17-02-28 20:23:00.183 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35 17-02-28 20:23:00.183 -08 000000105 INF: ===================Camera #2 Frame #35=================== 17-02-28 20:23:00.259 -08 000000091 INF: Y Motor: Unshifted Position: 5283771 17-02-28 20:23:00.309 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:00.348 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-02-28 20:23:00.348 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-02-28 20:23:00.348 -08 000000058 INF: ===================Camera #0 Frame #42=================== 17-02-28 20:23:00.352 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-02-28 20:23:00.352 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-02-28 20:23:00.352 -08 000000105 INF: ===================Camera #2 Frame #42=================== 17-02-28 20:23:00.437 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:00.520 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-02-28 20:23:00.520 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-02-28 20:23:00.520 -08 000000058 INF: ===================Camera #0 Frame #48=================== 17-02-28 20:23:00.525 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-02-28 20:23:00.525 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-02-28 20:23:00.525 -08 000000105 INF: ===================Camera #2 Frame #48=================== 17-02-28 20:23:00.572 -08 000000091 INF: Y Motor: Unshifted Position: 5081399 17-02-28 20:23:00.611 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 17-02-28 20:23:00.622 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:00.689 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54. 17-02-28 20:23:00.689 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54 17-02-28 20:23:00.689 -08 000000058 INF: ===================Camera #0 Frame #54=================== 17-02-28 20:23:00.695 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:00.695 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54. 17-02-28 20:23:00.695 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54 17-02-28 20:23:00.695 -08 000000105 INF: ===================Camera #2 Frame #54=================== 17-02-28 20:23:00.746 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:00.795 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:00.822 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:00.858 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60. 17-02-28 20:23:00.858 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60 17-02-28 20:23:00.858 -08 000000058 INF: ===================Camera #0 Frame #60=================== 17-02-28 20:23:00.865 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-02-28 20:23:00.865 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-02-28 20:23:00.865 -08 000000105 INF: ===================Camera #2 Frame #61=================== 17-02-28 20:23:00.883 -08 000000091 INF: Y Motor: Unshifted Position: 4877950 17-02-28 20:23:00.933 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:01.027 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-02-28 20:23:01.027 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-02-28 20:23:01.027 -08 000000058 INF: ===================Camera #0 Frame #67=================== 17-02-28 20:23:01.038 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-02-28 20:23:01.038 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-02-28 20:23:01.038 -08 000000105 INF: ===================Camera #2 Frame #67=================== 17-02-28 20:23:01.060 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:01.072 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:01.133 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:01.133 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:23:01.133 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 17-02-28 20:23:01.196 -08 000000091 INF: Y Motor: Unshifted Position: 4675802 17-02-28 20:23:01.199 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-02-28 20:23:01.199 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-02-28 20:23:01.199 -08 000000058 INF: ===================Camera #0 Frame #73=================== 17-02-28 20:23:01.208 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-02-28 20:23:01.208 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-02-28 20:23:01.208 -08 000000105 INF: ===================Camera #2 Frame #73=================== 17-02-28 20:23:01.246 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:01.368 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79. 17-02-28 20:23:01.368 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79 17-02-28 20:23:01.368 -08 000000058 INF: ===================Camera #0 Frame #79=================== 17-02-28 20:23:01.370 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:01.378 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79. 17-02-28 20:23:01.378 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79 17-02-28 20:23:01.378 -08 000000105 INF: ===================Camera #2 Frame #79=================== 17-02-28 20:23:01.509 -08 000000091 INF: Y Motor: Unshifted Position: 4472130 17-02-28 20:23:01.537 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85. 17-02-28 20:23:01.537 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85 17-02-28 20:23:01.537 -08 000000058 INF: ===================Camera #0 Frame #85=================== 17-02-28 20:23:01.548 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-02-28 20:23:01.548 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-02-28 20:23:01.548 -08 000000105 INF: ===================Camera #2 Frame #86=================== 17-02-28 20:23:01.559 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:01.683 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:01.706 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-02-28 20:23:01.706 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-02-28 20:23:01.706 -08 000000058 INF: ===================Camera #0 Frame #92=================== 17-02-28 20:23:01.721 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-02-28 20:23:01.721 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-02-28 20:23:01.721 -08 000000105 INF: ===================Camera #2 Frame #92=================== 17-02-28 20:23:01.816 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:23:01.816 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:23:01.817 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:23:01.817 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:01.819 -08 000000091 INF: Y Motor: Unshifted Position: 4270414 17-02-28 20:23:01.869 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:01.879 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98. 17-02-28 20:23:01.879 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98 17-02-28 20:23:01.879 -08 000000058 INF: ===================Camera #0 Frame #98=================== 17-02-28 20:23:01.880 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:01.880 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB2 (5)=================== 17-02-28 20:23:01.880 -08 000000018 INF: Valve A1: Go to position 5 17-02-28 20:23:01.880 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-02-28 20:23:01.892 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98. 17-02-28 20:23:01.892 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98 17-02-28 20:23:01.892 -08 000000105 INF: ===================Camera #2 Frame #98=================== 17-02-28 20:23:01.946 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 4\r 17-02-28 20:23:01.946 -08 000000018 INF: Valve A1: 23.214 seconds since last move, > 10.000 seconds required between moves 17-02-28 20:23:01.946 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 4 to 5 17-02-28 20:23:01.946 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW5\r 17-02-28 20:23:01.946 -08 000000018 INF: SerialPort A1 (VICIA1): Recv (discarded) 17-02-28 20:23:01.946 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-02-28 20:23:01.997 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:02.049 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104. 17-02-28 20:23:02.049 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104 17-02-28 20:23:02.049 -08 000000058 INF: ===================Camera #0 Frame #104=================== 17-02-28 20:23:02.063 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105. 17-02-28 20:23:02.063 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105 17-02-28 20:23:02.063 -08 000000105 INF: ===================Camera #2 Frame #105=================== 17-02-28 20:23:02.133 -08 000000091 INF: Y Motor: Unshifted Position: 4066306 17-02-28 20:23:02.183 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:02.194 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 5\r 17-02-28 20:23:02.194 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:23:02.194 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 17-02-28 20:23:02.219 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110. 17-02-28 20:23:02.219 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110 17-02-28 20:23:02.219 -08 000000058 INF: ===================Camera #0 Frame #110=================== 17-02-28 20:23:02.237 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-02-28 20:23:02.237 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-02-28 20:23:02.237 -08 000000105 INF: ===================Camera #2 Frame #111=================== 17-02-28 20:23:02.307 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:02.389 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-02-28 20:23:02.389 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-02-28 20:23:02.389 -08 000000058 INF: ===================Camera #0 Frame #117=================== 17-02-28 20:23:02.408 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-02-28 20:23:02.408 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-02-28 20:23:02.408 -08 000000105 INF: ===================Camera #2 Frame #117=================== 17-02-28 20:23:02.443 -08 000000091 INF: Y Motor: Unshifted Position: 3864588 17-02-28 20:23:02.493 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:02.562 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123. 17-02-28 20:23:02.562 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123 17-02-28 20:23:02.562 -08 000000058 INF: ===================Camera #0 Frame #123=================== 17-02-28 20:23:02.579 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124. 17-02-28 20:23:02.579 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124 17-02-28 20:23:02.579 -08 000000105 INF: ===================Camera #2 Frame #124=================== 17-02-28 20:23:02.621 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:02.689 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:23:02.690 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)=================== 17-02-28 20:23:02.690 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:02.731 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129. 17-02-28 20:23:02.731 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129 17-02-28 20:23:02.731 -08 000000058 INF: ===================Camera #0 Frame #129=================== 17-02-28 20:23:02.753 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130. 17-02-28 20:23:02.753 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130 17-02-28 20:23:02.753 -08 000000105 INF: ===================Camera #2 Frame #130=================== 17-02-28 20:23:02.756 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:02.757 -08 000000091 INF: Y Motor: Unshifted Position: 3660489 17-02-28 20:23:02.764 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000 17-02-28 20:23:02.807 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:02.856 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:23:02.901 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-02-28 20:23:02.901 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-02-28 20:23:02.901 -08 000000058 INF: ===================Camera #0 Frame #136=================== 17-02-28 20:23:02.924 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-02-28 20:23:02.924 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-02-28 20:23:02.924 -08 000000105 INF: ===================Camera #2 Frame #136=================== 17-02-28 20:23:02.930 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:02.941 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 17-02-28 20:23:02.941 -08 000000018 INF: Current Position of Pump is: 0 17-02-28 20:23:03.041 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r 17-02-28 20:23:03.068 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:03.069 -08 000000091 INF: Y Motor: Unshifted Position: 3457476 17-02-28 20:23:03.074 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142. 17-02-28 20:23:03.074 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142 17-02-28 20:23:03.074 -08 000000058 INF: ===================Camera #0 Frame #142=================== 17-02-28 20:23:03.095 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143. 17-02-28 20:23:03.095 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143 17-02-28 20:23:03.095 -08 000000105 INF: ===================Camera #2 Frame #143=================== 17-02-28 20:23:03.119 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:03.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:03.243 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:03.244 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148. 17-02-28 20:23:03.244 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148 17-02-28 20:23:03.244 -08 000000058 INF: ===================Camera #0 Frame #148=================== 17-02-28 20:23:03.254 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:03.269 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149. 17-02-28 20:23:03.269 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149 17-02-28 20:23:03.269 -08 000000105 INF: ===================Camera #2 Frame #149=================== 17-02-28 20:23:03.379 -08 000000091 INF: Y Motor: Unshifted Position: 3254678 17-02-28 20:23:03.415 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154. 17-02-28 20:23:03.415 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154 17-02-28 20:23:03.415 -08 000000058 INF: ===================Camera #0 Frame #154=================== 17-02-28 20:23:03.429 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:03.440 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155. 17-02-28 20:23:03.440 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155 17-02-28 20:23:03.440 -08 000000105 INF: ===================Camera #2 Frame #155=================== 17-02-28 20:23:03.504 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:03.557 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:03.570 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:03.585 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161. 17-02-28 20:23:03.585 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161 17-02-28 20:23:03.585 -08 000000058 INF: ===================Camera #0 Frame #161=================== 17-02-28 20:23:03.611 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162. 17-02-28 20:23:03.611 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162 17-02-28 20:23:03.611 -08 000000105 INF: ===================Camera #2 Frame #162=================== 17-02-28 20:23:03.670 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r 17-02-28 20:23:03.695 -08 000000091 INF: Y Motor: Unshifted Position: 3051229 17-02-28 20:23:03.745 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:03.754 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:03.759 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167. 17-02-28 20:23:03.759 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167 17-02-28 20:23:03.759 -08 000000058 INF: ===================Camera #0 Frame #167=================== 17-02-28 20:23:03.785 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-02-28 20:23:03.785 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-02-28 20:23:03.785 -08 000000105 INF: ===================Camera #2 Frame #168=================== 17-02-28 20:23:03.854 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:03.869 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:03.930 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173. 17-02-28 20:23:03.930 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173 17-02-28 20:23:03.930 -08 000000058 INF: ===================Camera #0 Frame #173=================== 17-02-28 20:23:03.942 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:03.942 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Aspirating port PortB=================== 17-02-28 20:23:03.956 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174. 17-02-28 20:23:03.956 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174 17-02-28 20:23:03.956 -08 000000105 INF: ===================Camera #2 Frame #174=================== 17-02-28 20:23:04.003 -08 000000091 INF: Y Motor: Unshifted Position: 2848870 17-02-28 20:23:04.042 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP7680R\r 17-02-28 20:23:04.053 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:04.100 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180. 17-02-28 20:23:04.100 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180 17-02-28 20:23:04.100 -08 000000058 INF: ===================Camera #0 Frame #180=================== 17-02-28 20:23:04.127 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181. 17-02-28 20:23:04.127 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181 17-02-28 20:23:04.127 -08 000000105 INF: ===================Camera #2 Frame #181=================== 17-02-28 20:23:04.128 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:04.179 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:04.228 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:04.274 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186. 17-02-28 20:23:04.274 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186 17-02-28 20:23:04.274 -08 000000058 INF: ===================Camera #0 Frame #186=================== 17-02-28 20:23:04.302 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-02-28 20:23:04.302 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-02-28 20:23:04.302 -08 000000105 INF: ===================Camera #2 Frame #187=================== 17-02-28 20:23:04.314 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:04.315 -08 000000091 INF: Y Motor: Unshifted Position: 2647155 17-02-28 20:23:04.365 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:04.444 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192. 17-02-28 20:23:04.444 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192 17-02-28 20:23:04.444 -08 000000058 INF: ===================Camera #0 Frame #192=================== 17-02-28 20:23:04.473 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193. 17-02-28 20:23:04.473 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193 17-02-28 20:23:04.473 -08 000000105 INF: ===================Camera #2 Frame #193=================== 17-02-28 20:23:04.493 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:04.564 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:04.614 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199. 17-02-28 20:23:04.614 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199 17-02-28 20:23:04.614 -08 000000058 INF: ===================Camera #0 Frame #199=================== 17-02-28 20:23:04.628 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:04.630 -08 000000091 INF: Y Motor: Unshifted Position: 2444359 17-02-28 20:23:04.644 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200. 17-02-28 20:23:04.644 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200 17-02-28 20:23:04.644 -08 000000105 INF: ===================Camera #2 Frame #200=================== 17-02-28 20:23:04.680 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:04.785 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205. 17-02-28 20:23:04.785 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205 17-02-28 20:23:04.785 -08 000000058 INF: ===================Camera #0 Frame #205=================== 17-02-28 20:23:04.802 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:04.817 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-02-28 20:23:04.817 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-02-28 20:23:04.817 -08 000000105 INF: ===================Camera #2 Frame #206=================== 17-02-28 20:23:04.878 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:04.940 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:04.941 -08 000000091 INF: Y Motor: Unshifted Position: 2240043 17-02-28 20:23:04.953 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211. 17-02-28 20:23:04.953 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211 17-02-28 20:23:04.953 -08 000000058 INF: ===================Camera #0 Frame #211=================== 17-02-28 20:23:04.988 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212. 17-02-28 20:23:04.988 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212 17-02-28 20:23:04.988 -08 000000105 INF: ===================Camera #2 Frame #212=================== 17-02-28 20:23:04.991 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:05.116 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:05.123 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217. 17-02-28 20:23:05.123 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217 17-02-28 20:23:05.123 -08 000000058 INF: ===================Camera #0 Frame #217=================== 17-02-28 20:23:05.159 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219. 17-02-28 20:23:05.159 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219 17-02-28 20:23:05.159 -08 000000105 INF: ===================Camera #2 Frame #219=================== 17-02-28 20:23:05.192 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:05.252 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:05.253 -08 000000091 INF: Y Motor: Unshifted Position: 2035721 17-02-28 20:23:05.294 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224. 17-02-28 20:23:05.294 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224 17-02-28 20:23:05.294 -08 000000058 INF: ===================Camera #0 Frame #224=================== 17-02-28 20:23:05.303 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:05.334 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225. 17-02-28 20:23:05.334 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225 17-02-28 20:23:05.334 -08 000000105 INF: ===================Camera #2 Frame #225=================== 17-02-28 20:23:05.426 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:05.468 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230. 17-02-28 20:23:05.468 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230 17-02-28 20:23:05.468 -08 000000058 INF: ===================Camera #0 Frame #230=================== 17-02-28 20:23:05.502 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:05.505 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231. 17-02-28 20:23:05.505 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231 17-02-28 20:23:05.505 -08 000000105 INF: ===================Camera #2 Frame #231=================== 17-02-28 20:23:05.563 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:05.564 -08 000000091 INF: Y Motor: Unshifted Position: 1834872 17-02-28 20:23:05.614 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:05.638 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236. 17-02-28 20:23:05.638 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236 17-02-28 20:23:05.638 -08 000000058 INF: ===================Camera #0 Frame #236=================== 17-02-28 20:23:05.676 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238. 17-02-28 20:23:05.676 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238 17-02-28 20:23:05.676 -08 000000105 INF: ===================Camera #2 Frame #238=================== 17-02-28 20:23:05.739 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:05.808 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243. 17-02-28 20:23:05.808 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243 17-02-28 20:23:05.808 -08 000000058 INF: ===================Camera #0 Frame #243=================== 17-02-28 20:23:05.813 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:05.851 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244. 17-02-28 20:23:05.851 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244 17-02-28 20:23:05.851 -08 000000105 INF: ===================Camera #2 Frame #244=================== 17-02-28 20:23:05.874 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:05.875 -08 000000091 INF: Y Motor: Unshifted Position: 1632717 17-02-28 20:23:05.925 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:05.982 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249. 17-02-28 20:23:05.982 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249 17-02-28 20:23:05.982 -08 000000058 INF: ===================Camera #0 Frame #249=================== 17-02-28 20:23:06.022 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250. 17-02-28 20:23:06.022 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250 17-02-28 20:23:06.022 -08 000000105 INF: ===================Camera #2 Frame #250=================== 17-02-28 20:23:06.053 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:06.124 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:06.152 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255. 17-02-28 20:23:06.152 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255 17-02-28 20:23:06.152 -08 000000058 INF: ===================Camera #0 Frame #255=================== 17-02-28 20:23:06.187 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:06.188 -08 000000091 INF: Y Motor: Unshifted Position: 1429052 17-02-28 20:23:06.193 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257. 17-02-28 20:23:06.193 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257 17-02-28 20:23:06.193 -08 000000105 INF: ===================Camera #2 Frame #257=================== 17-02-28 20:23:06.238 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:06.323 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262. 17-02-28 20:23:06.323 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262 17-02-28 20:23:06.323 -08 000000058 INF: ===================Camera #0 Frame #262=================== 17-02-28 20:23:06.366 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:06.369 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263. 17-02-28 20:23:06.369 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263 17-02-28 20:23:06.369 -08 000000105 INF: ===================Camera #2 Frame #263=================== 17-02-28 20:23:06.438 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:06.497 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268. 17-02-28 20:23:06.497 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268 17-02-28 20:23:06.497 -08 000000058 INF: ===================Camera #0 Frame #268=================== 17-02-28 20:23:06.501 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:06.502 -08 000000091 INF: Y Motor: Unshifted Position: 1227322 17-02-28 20:23:06.540 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270. 17-02-28 20:23:06.540 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270 17-02-28 20:23:06.540 -08 000000105 INF: ===================Camera #2 Frame #270=================== 17-02-28 20:23:06.552 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:06.625 -08 000000037 INF: FPGA: Recv TDIYWAIT 17-02-28 20:23:06.625 -08 000000046 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:23:06.626 -08 000000046 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-02-28 20:23:06.627 -08 000000033 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-02-28 20:23:06.627 -08 000000045 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-02-28 20:23:06.627 -08 000000033 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-02-28 20:23:06.627 -08 000000033 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-02-28 20:23:06.627 -08 000000033 INF: Excitation Filter 1: Moving 107 steps 17-02-28 20:23:06.628 -08 000000045 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-02-28 20:23:06.628 -08 000000033 INF: FPGA: Xmit EX1MV 107\n 17-02-28 20:23:06.628 -08 000000045 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-02-28 20:23:06.628 -08 000000045 INF: Excitation Filter 2: Moving 107 steps 17-02-28 20:23:06.634 -08 000000045 INF: FPGA: Xmit EX2MV 107\n 17-02-28 20:23:06.667 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:23:06.667 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:23:06.667 -08 000000058 INF: ===================Camera #0 Frame #272=================== 17-02-28 20:23:06.676 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:06.680 -08 000000058 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:23:06.681 -08 000000058 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:23:06.751 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:06.811 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:06.812 -08 000000091 INF: Y Motor: Unshifted Position: 1023230 17-02-28 20:23:06.844 -08 000000058 INF: Camera #0 ReleaseBuffer 17-02-28 20:23:06.844 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:23:06.844 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:23:06.844 -08 000000105 INF: ===================Camera #2 Frame #272=================== 17-02-28 20:23:06.844 -08 000000058 INF: ===================Camera TDI=================== 17-02-28 20:23:06.851 -08 000000105 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:23:06.852 -08 000000105 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:23:06.862 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:06.875 -08 000000058 INF: ====================================== 17-02-28 20:23:06.997 -08 000000035 INF: FPGA: Recv EX1MV 17-02-28 20:23:06.997 -08 000000035 INF: FPGA: Recv EX2MV 17-02-28 20:23:06.997 -08 000000045 INF: Excitation Filter 2: Moved 107 steps in 369.0725 ms 17-02-28 20:23:06.997 -08 000000033 INF: Excitation Filter 1: Moved 107 steps in 369.3877 ms 17-02-28 20:23:06.997 -08 000000033 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.5302 ms 17-02-28 20:23:06.997 -08 000000033 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.6059 ms 17-02-28 20:23:06.997 -08 000000045 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.3649 ms 17-02-28 20:23:06.997 -08 000000045 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.759 ms 17-02-28 20:23:06.997 -08 000000033 INF: ====================================== 17-02-28 20:23:06.998 -08 000000045 INF: ====================================== 17-02-28 20:23:06.999 -08 000000091 INF: Y Motor: Unshifted Position: 990925 17-02-28 20:23:06.999 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:23:06.999 -08 000000091 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:06.999 -08 000000046 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:23:07.000 -08 000000046 INF: ====================================== 17-02-28 20:23:07.053 -08 000000105 INF: Camera #2 ReleaseBuffer 17-02-28 20:23:07.053 -08 000000105 INF: ===================Camera TDI=================== 17-02-28 20:23:07.061 -08 000000091 INF: Y Motor: Recv v 0\r 17-02-28 20:23:07.061 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:07.061 -08 000000091 INF: Y Motor: Moved to 14.9093 after 7861 ms 17-02-28 20:23:07.061 -08 000000091 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:23:07.088 -08 000000105 INF: ====================================== 17-02-28 20:23:07.089 -08 000000108 INF: ===================Camera TDI=================== 17-02-28 20:23:07.090 -08 000000108 INF: ====================================== 17-02-28 20:23:07.124 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:07.125 -08 000000091 INF: Y Motor: Recv v 4097\r 17-02-28 20:23:07.125 -08 000000091 INF: Y Motor: Status After move finished OK: 17-02-28 20:23:07.125 -08 000000091 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:07.187 -08 000000091 INF: Y Motor: Recv v 0\r 17-02-28 20:23:07.187 -08 000000091 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:07.187 -08 000000091 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:23:07.250 -08 000000091 INF: Y Motor: Recv v 134217728\r 17-02-28 20:23:07.250 -08 000000091 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-02-28 20:23:07.250 -08 000000091 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:23:07.250 -08 000000091 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:23:07.312 -08 000000091 INF: Y Motor: Recv v 0\r 17-02-28 20:23:07.312 -08 000000091 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:23:07.312 -08 000000091 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:23:07.312 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:07.373 -08 000000091 INF: Y Motor: Recv ok\r 17-02-28 20:23:07.373 -08 000000091 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:23:07.373 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:07.374 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:07.438 -08 000000091 INF: Y Motor: Recv ok\r 17-02-28 20:23:07.438 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:07.438 -08 000000091 INF: ====================================== 17-02-28 20:23:07.439 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:07.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:07.441 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:07.441 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-02-28 20:23:07.498 -08 000000087 INF: FPGA: Recv TDICLINES 1023 17-02-28 20:23:07.498 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:23:07.560 -08 000000023 INF: FPGA: Recv TDIYERD 1490925 17-02-28 20:23:07.560 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-02-28 20:23:07.622 -08 000000064 INF: FPGA: Recv ZADCR 35206 17-02-28 20:23:07.622 -08 000000042 INF: At scan end Y pos = 14.909 and Z pos = -0.135. Y moved -48.539 mm 17-02-28 20:23:07.622 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-02-28 20:23:07.685 -08 000000083 INF: FPGA: Recv TDIPULSES 139265 17-02-28 20:23:07.685 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-02-28 20:23:07.685 -08 000000042 INF: TDIScan finished after 11899.1875 ms 17-02-28 20:23:07.685 -08 000000042 INF: Image[0]: Y should trigger at 63.448 mm, 2nd row was at 64.357 mm (error = 0.909 mm) 17-02-28 20:23:07.685 -08 000000042 INF: Image[2]: Y should trigger at 63.448 mm, 2nd row was at 64.357 mm (error = 0.909 mm) 17-02-28 20:23:07.687 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:07.688 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:07.722 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.627 um 17-02-28 20:23:07.722 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:07.723 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-02-28 20:23:07.747 -08 000000058 INF: FPGA: Recv SWOOF_RDSTAT 0 17-02-28 20:23:07.747 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:07.748 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:07.748 -08 000000033 INF: ===================Dither Clean Up Command=================== 17-02-28 20:23:07.748 -08 000000073 INF: ===================Set YMotor gains for fast moves=================== 17-02-28 20:23:07.748 -08 000000109 INF: ===================Set Y Motor Motor Velocity=================== 17-02-28 20:23:07.748 -08 000000074 INF: ===================Set Z Motor Motor Velocity=================== 17-02-28 20:23:07.749 -08 000000109 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:23:07.749 -08 000000073 INF: ====================================== 17-02-28 20:23:07.749 -08 000000074 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-02-28 20:23:07.749 -08 000000074 INF: FPGA: Xmit ZSTEP 1288471\n 17-02-28 20:23:07.749 -08 000000010 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:23:07.749 -08 000000050 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:23:07.749 -08 000000109 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:23:07.750 -08 000000010 INF: FPGA: Xmit ZSEL 0\n 17-02-28 20:23:07.752 -08 000000050 INF: ===================LFT:Extracting coords=================== 17-02-28 20:23:07.777 -08 000000050 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:23:07.778 -08 000000050 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-02-28 20:23:07.779 -08 000000078 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:07.779 -08 000000104 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:07.779 -08 000000059 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:07.779 -08 000000108 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:07.779 -08 000000078 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:23:07.779 -08 000000104 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:23:07.779 -08 000000108 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:23:07.779 -08 000000059 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:23:07.810 -08 000000023 INF: FPGA: Recv ZSTEP 17-02-28 20:23:07.810 -08 000000023 INF: FPGA: Recv ZSEL 17-02-28 20:23:07.810 -08 000000010 INF: FPGA: Xmit ZDACW 40860\n 17-02-28 20:23:07.810 -08 000000074 INF: ====================================== 17-02-28 20:23:07.812 -08 000000109 INF: Y Motor: Recv ok\r 17-02-28 20:23:07.812 -08 000000109 INF: ====================================== 17-02-28 20:23:07.853 -08 000000078 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:23:07.853 -08 000000104 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:23:07.853 -08 000000108 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:23:07.854 -08 000000059 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:23:07.873 -08 000000095 INF: FPGA: Recv ZDACW 17-02-28 20:23:07.874 -08 000000010 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-02-28 20:23:07.874 -08 000000010 INF: FPGA: Xmit TDIBB 0\n 17-02-28 20:23:07.933 -08 000000030 INF: FPGA: Recv TDIBB 17-02-28 20:23:07.933 -08 000000010 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:23:07.934 -08 000000010 INF: ====================================== 17-02-28 20:23:07.998 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:08.005 -08 000000108 INF: LFT found best fwhm score 2.115592 in 152 ms 17-02-28 20:23:08.005 -08 000000078 INF: LFT found best fwhm score 2.000002 in 152 ms 17-02-28 20:23:08.005 -08 000000078 INF: LFT found good score at index 3969 with fwhm value 2.000002. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:3,T 17-02-28 20:23:08.005 -08 000000104 INF: LFT found best fwhm score 2.000046 in 152 ms 17-02-28 20:23:08.005 -08 000000108 INF: LFT found good score at index 7853 with fwhm value 2.115592. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:3,T 17-02-28 20:23:08.005 -08 000000104 INF: LFT found good score at index 685 with fwhm value 2.000046. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:3,T 17-02-28 20:23:08.005 -08 000000078 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:08.005 -08 000000108 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:08.005 -08 000000104 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:08.005 -08 000000059 INF: LFT found best fwhm score 2.00039 in 151 ms 17-02-28 20:23:08.005 -08 000000059 INF: LFT found good score at index 7581 with fwhm value 2.00039. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:3,T 17-02-28 20:23:08.005 -08 000000078 INF: ====================================== 17-02-28 20:23:08.005 -08 000000059 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:08.005 -08 000000104 INF: ====================================== 17-02-28 20:23:08.006 -08 000000108 INF: ====================================== 17-02-28 20:23:08.006 -08 000000059 INF: ====================================== 17-02-28 20:23:08.007 -08 000000050 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:23:08.007 -08 000000050 INF: LFT weighted average best Z for top surface is at -0.157mm FC:B, C:3,L:3,T 17-02-28 20:23:08.008 -08 000000050 INF: ====================================== 17-02-28 20:23:08.009 -08 000000033 INF: ====================================== 17-02-28 20:23:08.010 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:08.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-02-28 20:23:08.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:08.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-02-28 20:23:08.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:08.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-02-28 20:23:08.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:08.012 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-02-28 20:23:08.012 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:08.012 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308=================== 17-02-28 20:23:08.012 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308=================== 17-02-28 20:23:08.013 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Aspirating port PortB, Waiting for image analysis=================== 17-02-28 20:23:08.013 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Aspirating port PortB=================== 17-02-28 20:23:08.013 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Waiting for image analysis=================== 17-02-28 20:23:08.013 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308=================== 17-02-28 20:23:08.036 -08 000000042 INF: Waited 23 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 0, buffer wait time 0 17-02-28 20:23:08.036 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:23:08.037 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308=================== 17-02-28 20:23:08.037 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:08.037 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308=================== 17-02-28 20:23:08.037 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-02-28 20:23:08.037 -08 000000042 INF: Transformed XStagePosition from 75.26964 mm to 75.2499730624259 mm. 17-02-28 20:23:08.049 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5572293553278 mm. 17-02-28 20:23:08.049 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3572293553278 mm. 17-02-28 20:23:08.049 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4479793553278 mm. 17-02-28 20:23:08.052 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:08.052 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-02-28 20:23:08.052 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:08.052 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -155.9 um, section = C_1 17-02-28 20:23:08.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:23:08.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:23:08.071 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:08.072 -08 000000078 INF: ===================MoveEmissionFilters=================== 17-02-28 20:23:08.075 -08 000000105 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:23:08.075 -08 000000060 INF: ===================Move X,Y=================== 17-02-28 20:23:08.076 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:23:08.076 -08 000000060 INF: ===================Move X,Y, Parallel=================== 17-02-28 20:23:08.076 -08 000000105 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:23:08.077 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-02-28 20:23:08.077 -08 000000046 INF: Z Motor: Entering MoveAbsStepped 17-02-28 20:23:08.078 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:23:08.079 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-02-28 20:23:08.080 -08 000000047 INF: ===================Move X Motor without settling=================== 17-02-28 20:23:08.080 -08 000000064 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-02-28 20:23:08.080 -08 000000091 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:23:08.080 -08 000000047 INF: X Motor: Xmit PR VM\n 17-02-28 20:23:08.081 -08 000000104 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:23:08.081 -08 000000064 INF: ====================================== 17-02-28 20:23:08.082 -08 000000104 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:23:08.083 -08 000000058 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:08.083 -08 000000091 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:23:08.083 -08 000000064 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-02-28 20:23:08.083 -08 000000077 INF: ===================Move Y Motor without settling=================== 17-02-28 20:23:08.083 -08 000000077 INF: Y Motor: Moving to 64.5572 mm @25.000 mm/sec, started at 14.9093 mm 17-02-28 20:23:08.083 -08 000000064 INF: Emission Filter 12: Remaining IntoPath 17-02-28 20:23:08.083 -08 000000058 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:08.083 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":3,"Tile":1101,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF192","HCSMMF216","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.084 -08 000000064 INF: ====================================== 17-02-28 20:23:08.084 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:23:08.084 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:08.084 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:23:08.084 -08 000000058 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:23:08.085 -08 000000058 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:23:08.085 -08 000000058 INF: FPGA: Xmit ZSEL 3\n 17-02-28 20:23:08.085 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:23:08.085 -08 000000105 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:23:08.085 -08 000000050 INF: ===================Camera Arm TDI=================== 17-02-28 20:23:08.086 -08 000000064 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-02-28 20:23:08.086 -08 000000064 INF: ====================================== 17-02-28 20:23:08.086 -08 000000050 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:23:08.086 -08 000000105 INF: ====================================== 17-02-28 20:23:08.087 -08 000000051 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-02-28 20:23:08.087 -08 000000050 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:23:08.087 -08 000000051 INF: ====================================== 17-02-28 20:23:08.088 -08 000000101 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-02-28 20:23:08.088 -08 000000064 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-02-28 20:23:08.088 -08 000000105 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-02-28 20:23:08.088 -08 000000101 INF: ====================================== 17-02-28 20:23:08.089 -08 000000105 INF: ====================================== 17-02-28 20:23:08.089 -08 000000064 INF: ====================================== 17-02-28 20:23:08.089 -08 000000051 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-02-28 20:23:08.090 -08 000000051 INF: ====================================== 17-02-28 20:23:08.090 -08 000000091 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:23:08.090 -08 000000104 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:23:08.091 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:23:08.091 -08 000000091 INF: ====================================== 17-02-28 20:23:08.091 -08 000000104 INF: ====================================== 17-02-28 20:23:08.092 -08 000000087 INF: ====================================== 17-02-28 20:23:08.094 -08 000000078 INF: ====================================== 17-02-28 20:23:08.124 -08 000000101 INF: FPGA: Recv ZSEL 17-02-28 20:23:08.126 -08 000000077 INF: Y Motor: Recv ok\r 17-02-28 20:23:08.126 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:23:08.126 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:08.126 -08 000000058 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:23:08.126 -08 000000058 INF: FPGA: Xmit TDIBB 1\n 17-02-28 20:23:08.126 -08 000000047 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-02-28 20:23:08.127 -08 000000047 INF: X Motor: Xmit PR VI\n 17-02-28 20:23:08.152 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":3,"Tile":1104,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF271","HCSMMF197","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.155 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":3,"Tile":1103,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF180","HCSMMF240","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.191 -08 000000037 INF: FPGA: Recv TDIBB 17-02-28 20:23:08.191 -08 000000058 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:23:08.193 -08 000000047 INF: X Motor: Recv PR VI\r\n410\r\n> 17-02-28 20:23:08.193 -08 000000047 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-02-28 20:23:08.193 -08 000000047 INF: X Motor: Moving to 75.2500 mm @15.000 mm/sec, started at 74.1465 mm 17-02-28 20:23:08.193 -08 000000077 INF: Y Motor: Recv ok\r 17-02-28 20:23:08.193 -08 000000058 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:23:08.193 -08 000000047 INF: X Motor: Xmit MA 6656\n 17-02-28 20:23:08.193 -08 000000077 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:08.193 -08 000000058 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:08.195 -08 000000058 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-02-28 20:23:08.195 -08 000000058 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-02-28 20:23:08.195 -08 000000058 INF: FPGA: Xmit ZSTEP 1792263\n 17-02-28 20:23:08.213 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":3,"Tile":1102,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF233","HCSMMF225","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.215 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":3,"Tile":1107,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF262","HCSMMF284","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.218 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":3,"Tile":1105,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF272","HCSMMF196","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.225 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":3,"Tile":1108,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF285","HCSMMF260","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.229 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":3,"Tile":1106,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF255","HCSMMF278","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.230 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":3,"Tile":1110,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF263","HCSMMF268","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.239 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":3,"Tile":1109,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF273","HCSMMF247","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.241 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":3,"Tile":1113,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF287","HCSMMF230","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.242 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":3,"Tile":1114,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF184","HCSMMF266","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.243 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":3,"Tile":1115,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF275","HCSMMF189","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.243 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":3,"Tile":1111,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF213","HCSMMF194","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.244 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":3,"Tile":1112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF223","HCSMMF246","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.245 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":3,"Tile":1119,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF204","HCSMMF280","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.246 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":3,"Tile":1117,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF251","HCSMMF226","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.246 -08 000000059 INF: FPGA: Recv ZSTEP 17-02-28 20:23:08.246 -08 000000058 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:08.246 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":3,"Tile":1116,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF214","HCSMMF224","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.247 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":3,"Tile":1118,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF274","HCSMMF177","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.248 -08 000000077 INF: Y Motor: Recv v 0\r 17-02-28 20:23:08.248 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:08.248 -08 000000077 INF: Y Motor: Set target position to 5955723 encoder counts 17-02-28 20:23:08.248 -08 000000077 INF: Y Motor: Xmit s r0xca 5955723\r 17-02-28 20:23:08.248 -08 000000058 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-02-28 20:23:08.248 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":3,"Tile":1120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF265","HCSMMF259","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.248 -08 000000058 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:08.249 -08 000000047 INF: X Motor: Recv MA 6656\r\n> 17-02-28 20:23:08.249 -08 000000047 INF: X Motor: WaitUntilStopped 60074 17-02-28 20:23:08.249 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":3,"Tile":1123,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF212","HCSMMF176","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.250 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":3,"Tile":1121,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF179","HCSMMF237","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.250 -08 000000058 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-02-28 20:23:08.250 -08 000000058 INF: Z Motor: Entering ArmAbsStepped 17-02-28 20:23:08.250 -08 000000058 INF: Z Motor: Arming to move to -0.1159 mm 17-02-28 20:23:08.250 -08 000000058 INF: FPGA: Xmit ZYT 6435723 4\n 17-02-28 20:23:08.250 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":3,"Tile":1124,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF279","HCSMMF191","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.251 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":3,"Tile":1127,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF200","HCSMMF198","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.252 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":3,"Tile":1128,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF286","HCSMMF249","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.254 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":3,"Tile":1125,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF258","HCSMMF188","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.255 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":3,"Tile":1122,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF264","HCSMMF199","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.256 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":3,"Tile":1126,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF227","HCSMMF261","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:08.257 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:08.264 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-02-28 20:23:08.308 -08 000000059 INF: FPGA: Recv ZYT 17-02-28 20:23:08.308 -08 000000058 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490925 enc / 14.909 mm / ) = 6435723 enc / 64.357 mm 17-02-28 20:23:08.308 -08 000000058 INF: FPGA: Xmit ZARM 30374\n 17-02-28 20:23:08.310 -08 000000077 INF: Y Motor: Recv ok\r 17-02-28 20:23:08.310 -08 000000077 INF: Y Motor: Start the move command 17-02-28 20:23:08.310 -08 000000077 INF: Y Motor: Xmit t 1\r 17-02-28 20:23:08.321 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:08.353 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:08.353 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-02-28 20:23:08.370 -08 000000101 INF: FPGA: Recv ZARM 17-02-28 20:23:08.370 -08 000000058 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0165 ms 17-02-28 20:23:08.370 -08 000000058 INF: Z Motor: ArmAbsStepped took 119.8991 ms 17-02-28 20:23:08.370 -08 000000058 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:08.371 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:08.372 -08 000000077 INF: Y Motor: Recv ok\r 17-02-28 20:23:08.372 -08 000000058 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:08.372 -08 000000077 INF: Y Motor: WaitUntilStopped 61986 17-02-28 20:23:08.372 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:08.373 -08 000000058 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-02-28 20:23:08.374 -08 000000058 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:08.375 -08 000000058 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-02-28 20:23:08.376 -08 000000058 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:08.377 -08 000000058 INF: ====================================== 17-02-28 20:23:08.393 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:08.398 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-02-28 20:23:08.475 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:08.480 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-02-28 20:23:08.498 -08 000000077 INF: Y Motor: Unshifted Position: 1074533 17-02-28 20:23:08.548 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:08.570 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:08.576 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-02-28 20:23:08.623 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:08.670 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:08.672 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:08.677 -08 000000050 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:23:08.677 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:23:08.677 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:23:08.683 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:08.692 -08 000000050 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:23:08.694 -08 000000050 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:23:08.813 -08 000000077 INF: Y Motor: Unshifted Position: 1780088 17-02-28 20:23:08.863 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:08.872 -08 000000047 INF: X Motor: Xmit PR ER\n 17-02-28 20:23:08.933 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:08.934 -08 000000047 INF: X Motor: Recv PR ER\r\n0\r\n> 17-02-28 20:23:08.934 -08 000000047 INF: X Motor: Moved to 75.2500 after 685 ms 17-02-28 20:23:08.934 -08 000000047 INF: ====================================== 17-02-28 20:23:08.969 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-02-28 20:23:08.984 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:08.997 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:09.121 -08 000000077 INF: Y Motor: Unshifted Position: 2563444 17-02-28 20:23:09.171 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:09.247 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:09.291 -08 000000050 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:23:09.291 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:23:09.291 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:23:09.295 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:09.306 -08 000000050 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:23:09.308 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:09.308 -08 000000050 INF: ===================Camera Arm TDI=================== 17-02-28 20:23:09.309 -08 000000050 INF: ====================================== 17-02-28 20:23:09.310 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:23:09.311 -08 000000046 INF: ====================================== 17-02-28 20:23:09.434 -08 000000077 INF: Y Motor: Unshifted Position: 3340881 17-02-28 20:23:09.484 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:09.558 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:09.609 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:09.620 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:09.746 -08 000000077 INF: Y Motor: Unshifted Position: 4125954 17-02-28 20:23:09.796 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:09.870 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:09.920 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:09.931 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:09.931 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)=================== 17-02-28 20:23:09.931 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)=================== 17-02-28 20:23:09.932 -08 000000018 INF: WaitCommand(5000) start 17-02-28 20:23:09.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Delay 5 of 5 seconds left=================== 17-02-28 20:23:10.056 -08 000000077 INF: Y Motor: Unshifted Position: 4899235 17-02-28 20:23:10.106 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:10.233 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:10.370 -08 000000077 INF: Y Motor: Unshifted Position: 5683469 17-02-28 20:23:10.420 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:10.546 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:10.682 -08 000000077 INF: Y Motor: Unshifted Position: 5955725 17-02-28 20:23:10.682 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:23:10.682 -08 000000077 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:10.745 -08 000000077 INF: Y Motor: Recv v 0\r 17-02-28 20:23:10.745 -08 000000077 INF: Y Motor: Moved to 64.5573 after 2373 ms 17-02-28 20:23:10.745 -08 000000077 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:23:10.807 -08 000000077 INF: Y Motor: Recv v 4096\r 17-02-28 20:23:10.807 -08 000000077 INF: Y Motor: Status After move finished OK: 17-02-28 20:23:10.807 -08 000000077 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:10.869 -08 000000077 INF: Y Motor: Recv v 0\r 17-02-28 20:23:10.869 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:10.869 -08 000000077 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:23:10.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)=================== 17-02-28 20:23:10.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Delay 4 of 5 seconds left=================== 17-02-28 20:23:10.933 -08 000000077 INF: Y Motor: Recv v 402653184\r 17-02-28 20:23:10.933 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-02-28 20:23:10.933 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:23:10.933 -08 000000077 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:23:10.993 -08 000000077 INF: Y Motor: Recv v 0\r 17-02-28 20:23:10.993 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:23:10.993 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:23:10.993 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:11.056 -08 000000077 INF: Y Motor: Recv ok\r 17-02-28 20:23:11.056 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:23:11.056 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:11.117 -08 000000077 INF: Y Motor: Recv ok\r 17-02-28 20:23:11.117 -08 000000077 INF: ====================================== 17-02-28 20:23:11.118 -08 000000060 INF: ===================Move X,Y=================== 17-02-28 20:23:11.119 -08 000000060 INF: ====================================== 17-02-28 20:23:11.120 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:23:11.121 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:11.121 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-02-28 20:23:11.121 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-02-28 20:23:11.182 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:23:11.182 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-02-28 20:23:11.242 -08 000000060 INF: FPGA: Recv ZFREQCL 17-02-28 20:23:11.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-02-28 20:23:11.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:11.243 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:23:11.304 -08 000000105 INF: FPGA: Recv TDIYERD 6455724 17-02-28 20:23:11.304 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455724 counts (64.557 mm) 17-02-28 20:23:11.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:23:11.305 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:23:11.306 -08 000000108 INF: ===================TDI FPGA Arm=================== 17-02-28 20:23:11.306 -08 000000077 INF: ===================Set YMotor gains for scans=================== 17-02-28 20:23:11.306 -08 000000077 INF: ====================================== 17-02-28 20:23:11.306 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:23:11.307 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-02-28 20:23:11.307 -08 000000108 INF: FPGA: Xmit TDIYPOS 6344798\n 17-02-28 20:23:11.367 -08 000000082 INF: FPGA: Recv TDIYPOS 17-02-28 20:23:11.367 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:23:11.369 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-02-28 20:23:11.369 -08 000000108 INF: FPGA: Xmit TDIYARM3 139264 6435723 1 1\n 17-02-28 20:23:11.430 -08 000000037 INF: FPGA: Recv TDIYARM3 17-02-28 20:23:11.430 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:23:11.431 -08 000000108 INF: ===================TDI FPGA Arm=================== 17-02-28 20:23:11.432 -08 000000108 INF: ====================================== 17-02-28 20:23:11.433 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:23:11.434 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:11.434 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:11.435 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:11.435 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:11.436 -08 000000050 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-02-28 20:23:11.436 -08 000000082 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-02-28 20:23:11.436 -08 000000050 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-02-28 20:23:11.436 -08 000000050 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-02-28 20:23:11.436 -08 000000050 INF: Excitation Filter 2: Moving -107 steps 17-02-28 20:23:11.436 -08 000000082 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-02-28 20:23:11.436 -08 000000050 INF: FPGA: Xmit EX2MV -107\n 17-02-28 20:23:11.436 -08 000000082 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-02-28 20:23:11.436 -08 000000082 INF: Excitation Filter 1: Moving -107 steps 17-02-28 20:23:11.440 -08 000000082 INF: FPGA: Xmit EX1MV -107\n 17-02-28 20:23:11.867 -08 000000047 INF: FPGA: Recv EX2MV 17-02-28 20:23:11.868 -08 000000047 INF: FPGA: Recv EX1MV 17-02-28 20:23:11.868 -08 000000082 INF: Excitation Filter 1: Moved -107 steps in 431.2373 ms 17-02-28 20:23:11.868 -08 000000082 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 431.4342 ms 17-02-28 20:23:11.868 -08 000000082 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 431.5391 ms 17-02-28 20:23:11.868 -08 000000050 INF: Excitation Filter 2: Moved -107 steps in 431.4186 ms 17-02-28 20:23:11.868 -08 000000050 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 431.8319 ms 17-02-28 20:23:11.868 -08 000000050 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 431.9106 ms 17-02-28 20:23:11.868 -08 000000082 INF: ====================================== 17-02-28 20:23:11.868 -08 000000050 INF: ====================================== 17-02-28 20:23:11.870 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:11.871 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:11.871 -08 000000104 INF: ===================Camera TDI=================== 17-02-28 20:23:11.872 -08 000000059 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:23:11.872 -08 000000091 INF: ===================FPGA Z Wait=================== 17-02-28 20:23:11.872 -08 000000046 INF: ===================Move Y Motor without settling=================== 17-02-28 20:23:11.872 -08 000000091 INF: FPGA: Xmit ZWAIT\n 17-02-28 20:23:11.872 -08 000000046 INF: Y Motor: Moving to 14.9089 mm @6.500 mm/sec, started at 64.5573 mm 17-02-28 20:23:11.872 -08 000000046 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:23:11.872 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:11.872 -08 000000104 INF: ===================Camera TDI, Parallel=================== 17-02-28 20:23:11.872 -08 000000059 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-02-28 20:23:11.873 -08 000000059 INF: FPGA: Xmit TDIYWAIT\n 17-02-28 20:23:11.873 -08 000000037 INF: ===================Camera TDI=================== 17-02-28 20:23:11.873 -08 000000095 INF: ===================Camera TDI=================== 17-02-28 20:23:11.892 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:11.892 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:11.894 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:11.894 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:11.928 -08 000000046 INF: Y Motor: Recv ok\r 17-02-28 20:23:11.928 -08 000000046 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:23:11.928 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:11.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)=================== 17-02-28 20:23:11.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Delay 3 of 5 seconds left=================== 17-02-28 20:23:11.991 -08 000000046 INF: Y Motor: Recv ok\r 17-02-28 20:23:11.991 -08 000000046 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:12.042 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:12.042 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:12.044 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:12.044 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:12.053 -08 000000046 INF: Y Motor: Recv v 0\r 17-02-28 20:23:12.053 -08 000000046 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:12.053 -08 000000046 INF: Y Motor: Set target position to 990889 encoder counts 17-02-28 20:23:12.053 -08 000000046 INF: Y Motor: Xmit s r0xca 990889\r 17-02-28 20:23:12.118 -08 000000046 INF: Y Motor: Recv ok\r 17-02-28 20:23:12.118 -08 000000046 INF: Y Motor: Start the move command 17-02-28 20:23:12.118 -08 000000046 INF: Y Motor: Xmit t 1\r 17-02-28 20:23:12.180 -08 000000046 INF: Y Motor: Recv ok\r 17-02-28 20:23:12.180 -08 000000046 INF: Y Motor: WaitUntilStopped 67638 17-02-28 20:23:12.180 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:12.192 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:12.192 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:12.194 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:12.194 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:12.240 -08 000000047 INF: FPGA: Recv ZWAIT 17-02-28 20:23:12.240 -08 000000091 INF: ====================================== 17-02-28 20:23:12.304 -08 000000046 INF: Y Motor: Unshifted Position: 5893872 17-02-28 20:23:12.342 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:23:12.342 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:23:12.342 -08 000000037 INF: ===================Camera #0 Frame #5=================== 17-02-28 20:23:12.344 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:23:12.344 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:23:12.344 -08 000000095 INF: ===================Camera #2 Frame #5=================== 17-02-28 20:23:12.354 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:12.478 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:12.514 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12. 17-02-28 20:23:12.514 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12 17-02-28 20:23:12.514 -08 000000037 INF: ===================Camera #0 Frame #12=================== 17-02-28 20:23:12.518 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12. 17-02-28 20:23:12.518 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12 17-02-28 20:23:12.518 -08 000000095 INF: ===================Camera #2 Frame #12=================== 17-02-28 20:23:12.617 -08 000000046 INF: Y Motor: Unshifted Position: 5692374 17-02-28 20:23:12.667 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:12.686 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18. 17-02-28 20:23:12.686 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18 17-02-28 20:23:12.686 -08 000000037 INF: ===================Camera #0 Frame #18=================== 17-02-28 20:23:12.701 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18. 17-02-28 20:23:12.701 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18 17-02-28 20:23:12.701 -08 000000095 INF: ===================Camera #2 Frame #18=================== 17-02-28 20:23:12.791 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:12.862 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24. 17-02-28 20:23:12.862 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24 17-02-28 20:23:12.862 -08 000000037 INF: ===================Camera #0 Frame #24=================== 17-02-28 20:23:12.870 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 24, frameCount = 25. 17-02-28 20:23:12.870 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 25 17-02-28 20:23:12.870 -08 000000095 INF: ===================Camera #2 Frame #25=================== 17-02-28 20:23:12.927 -08 000000046 INF: Y Motor: Unshifted Position: 5488711 17-02-28 20:23:12.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)=================== 17-02-28 20:23:12.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Delay 2 of 5 seconds left=================== 17-02-28 20:23:12.977 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:13.032 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31. 17-02-28 20:23:13.032 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31 17-02-28 20:23:13.032 -08 000000037 INF: ===================Camera #0 Frame #31=================== 17-02-28 20:23:13.044 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31. 17-02-28 20:23:13.044 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31 17-02-28 20:23:13.044 -08 000000095 INF: ===================Camera #2 Frame #31=================== 17-02-28 20:23:13.102 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:13.203 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37. 17-02-28 20:23:13.203 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37 17-02-28 20:23:13.203 -08 000000037 INF: ===================Camera #0 Frame #37=================== 17-02-28 20:23:13.222 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 37, frameCount = 38. 17-02-28 20:23:13.222 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 38 17-02-28 20:23:13.222 -08 000000095 INF: ===================Camera #2 Frame #38=================== 17-02-28 20:23:13.241 -08 000000046 INF: Y Motor: Unshifted Position: 5286558 17-02-28 20:23:13.291 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:13.371 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43. 17-02-28 20:23:13.371 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43 17-02-28 20:23:13.371 -08 000000037 INF: ===================Camera #0 Frame #43=================== 17-02-28 20:23:13.405 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44. 17-02-28 20:23:13.405 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44 17-02-28 20:23:13.405 -08 000000095 INF: ===================Camera #2 Frame #44=================== 17-02-28 20:23:13.415 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:13.539 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49. 17-02-28 20:23:13.539 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49 17-02-28 20:23:13.539 -08 000000037 INF: ===================Camera #0 Frame #49=================== 17-02-28 20:23:13.551 -08 000000046 INF: Y Motor: Unshifted Position: 5082883 17-02-28 20:23:13.584 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51. 17-02-28 20:23:13.584 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51 17-02-28 20:23:13.584 -08 000000095 INF: ===================Camera #2 Frame #51=================== 17-02-28 20:23:13.601 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:13.715 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56. 17-02-28 20:23:13.715 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56 17-02-28 20:23:13.715 -08 000000037 INF: ===================Camera #0 Frame #56=================== 17-02-28 20:23:13.725 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:13.768 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 57, frameCount = 58. 17-02-28 20:23:13.768 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 58 17-02-28 20:23:13.768 -08 000000095 INF: ===================Camera #2 Frame #58=================== 17-02-28 20:23:13.864 -08 000000046 INF: Y Motor: Unshifted Position: 4879217 17-02-28 20:23:13.895 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62. 17-02-28 20:23:13.895 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62 17-02-28 20:23:13.895 -08 000000037 INF: ===================Camera #0 Frame #62=================== 17-02-28 20:23:13.914 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:13.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)=================== 17-02-28 20:23:13.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Delay 1 of 5 seconds left=================== 17-02-28 20:23:13.942 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64. 17-02-28 20:23:13.942 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64 17-02-28 20:23:13.942 -08 000000095 INF: ===================Camera #2 Frame #64=================== 17-02-28 20:23:14.038 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:14.073 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69. 17-02-28 20:23:14.073 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69 17-02-28 20:23:14.073 -08 000000037 INF: ===================Camera #0 Frame #69=================== 17-02-28 20:23:14.121 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 70, frameCount = 71. 17-02-28 20:23:14.121 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 71 17-02-28 20:23:14.121 -08 000000095 INF: ===================Camera #2 Frame #71=================== 17-02-28 20:23:14.177 -08 000000046 INF: Y Motor: Unshifted Position: 4677717 17-02-28 20:23:14.227 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:14.254 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76. 17-02-28 20:23:14.254 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76 17-02-28 20:23:14.254 -08 000000037 INF: ===================Camera #0 Frame #76=================== 17-02-28 20:23:14.293 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77. 17-02-28 20:23:14.293 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77 17-02-28 20:23:14.293 -08 000000095 INF: ===================Camera #2 Frame #77=================== 17-02-28 20:23:14.351 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:14.428 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82. 17-02-28 20:23:14.428 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82 17-02-28 20:23:14.428 -08 000000037 INF: ===================Camera #0 Frame #82=================== 17-02-28 20:23:14.471 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 83, frameCount = 84. 17-02-28 20:23:14.471 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 84 17-02-28 20:23:14.471 -08 000000095 INF: ===================Camera #2 Frame #84=================== 17-02-28 20:23:14.489 -08 000000046 INF: Y Motor: Unshifted Position: 4474040 17-02-28 20:23:14.539 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:14.598 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88. 17-02-28 20:23:14.598 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88 17-02-28 20:23:14.598 -08 000000037 INF: ===================Camera #0 Frame #88=================== 17-02-28 20:23:14.643 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90. 17-02-28 20:23:14.643 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90 17-02-28 20:23:14.643 -08 000000095 INF: ===================Camera #2 Frame #90=================== 17-02-28 20:23:14.661 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:14.766 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94. 17-02-28 20:23:14.766 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94 17-02-28 20:23:14.766 -08 000000037 INF: ===================Camera #0 Frame #94=================== 17-02-28 20:23:14.800 -08 000000046 INF: Y Motor: Unshifted Position: 4270598 17-02-28 20:23:14.813 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96. 17-02-28 20:23:14.813 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96 17-02-28 20:23:14.813 -08 000000095 INF: ===================Camera #2 Frame #96=================== 17-02-28 20:23:14.850 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:14.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)=================== 17-02-28 20:23:14.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)=================== 17-02-28 20:23:14.932 -08 000000018 INF: WaitCommand(5000) end 17-02-28 20:23:14.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)=================== 17-02-28 20:23:14.934 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101. 17-02-28 20:23:14.934 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101 17-02-28 20:23:14.934 -08 000000037 INF: ===================Camera #0 Frame #101=================== 17-02-28 20:23:14.974 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:14.982 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102. 17-02-28 20:23:14.982 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102 17-02-28 20:23:14.982 -08 000000095 INF: ===================Camera #2 Frame #102=================== 17-02-28 20:23:15.031 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:23:15.105 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107. 17-02-28 20:23:15.105 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107 17-02-28 20:23:15.105 -08 000000037 INF: ===================Camera #0 Frame #107=================== 17-02-28 20:23:15.110 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF) 17-02-28 20:23:15.110 -08 000000018 INF: Current Position of Pump is: 7680 17-02-28 20:23:15.111 -08 000000046 INF: Y Motor: Unshifted Position: 4068439 17-02-28 20:23:15.151 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109. 17-02-28 20:23:15.151 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109 17-02-28 20:23:15.151 -08 000000095 INF: ===================Camera #2 Frame #109=================== 17-02-28 20:23:15.161 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:15.210 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:23:15.273 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113. 17-02-28 20:23:15.273 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113 17-02-28 20:23:15.273 -08 000000037 INF: ===================Camera #0 Frame #113=================== 17-02-28 20:23:15.286 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:15.299 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF) 17-02-28 20:23:15.299 -08 000000018 INF: Current Position of Pump is: 7680 17-02-28 20:23:15.299 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Dispensing port PortC=================== 17-02-28 20:23:15.323 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115. 17-02-28 20:23:15.323 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115 17-02-28 20:23:15.323 -08 000000095 INF: ===================Camera #2 Frame #115=================== 17-02-28 20:23:15.399 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD7680R\r 17-02-28 20:23:15.424 -08 000000046 INF: Y Motor: Unshifted Position: 3864776 17-02-28 20:23:15.442 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119. 17-02-28 20:23:15.442 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119 17-02-28 20:23:15.442 -08 000000037 INF: ===================Camera #0 Frame #119=================== 17-02-28 20:23:15.474 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:15.485 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:15.492 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121. 17-02-28 20:23:15.492 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121 17-02-28 20:23:15.492 -08 000000095 INF: ===================Camera #2 Frame #121=================== 17-02-28 20:23:15.585 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:15.598 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:15.610 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126. 17-02-28 20:23:15.610 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126 17-02-28 20:23:15.610 -08 000000037 INF: ===================Camera #0 Frame #126=================== 17-02-28 20:23:15.661 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127. 17-02-28 20:23:15.661 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127 17-02-28 20:23:15.661 -08 000000095 INF: ===================Camera #2 Frame #127=================== 17-02-28 20:23:15.671 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:15.738 -08 000000046 INF: Y Motor: Unshifted Position: 3663272 17-02-28 20:23:15.782 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132. 17-02-28 20:23:15.782 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132 17-02-28 20:23:15.782 -08 000000037 INF: ===================Camera #0 Frame #132=================== 17-02-28 20:23:15.788 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:15.830 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134. 17-02-28 20:23:15.830 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134 17-02-28 20:23:15.830 -08 000000095 INF: ===================Camera #2 Frame #134=================== 17-02-28 20:23:15.911 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:15.921 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:15.951 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138. 17-02-28 20:23:15.951 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138 17-02-28 20:23:15.951 -08 000000037 INF: ===================Camera #0 Frame #138=================== 17-02-28 20:23:15.984 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:16.003 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140. 17-02-28 20:23:16.003 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140 17-02-28 20:23:16.003 -08 000000095 INF: ===================Camera #2 Frame #140=================== 17-02-28 20:23:16.047 -08 000000046 INF: Y Motor: Unshifted Position: 3459609 17-02-28 20:23:16.097 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:16.120 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144. 17-02-28 20:23:16.120 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144 17-02-28 20:23:16.120 -08 000000037 INF: ===================Camera #0 Frame #144=================== 17-02-28 20:23:16.172 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146. 17-02-28 20:23:16.172 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146 17-02-28 20:23:16.172 -08 000000095 INF: ===================Camera #2 Frame #146=================== 17-02-28 20:23:16.223 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:16.234 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:16.290 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151. 17-02-28 20:23:16.290 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151 17-02-28 20:23:16.290 -08 000000037 INF: ===================Camera #0 Frame #151=================== 17-02-28 20:23:16.298 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:16.342 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152. 17-02-28 20:23:16.342 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152 17-02-28 20:23:16.342 -08 000000095 INF: ===================Camera #2 Frame #152=================== 17-02-28 20:23:16.361 -08 000000046 INF: Y Motor: Unshifted Position: 3255942 17-02-28 20:23:16.411 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:16.461 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157. 17-02-28 20:23:16.461 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157 17-02-28 20:23:16.461 -08 000000037 INF: ===================Camera #0 Frame #157=================== 17-02-28 20:23:16.511 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 158, frameCount = 159. 17-02-28 20:23:16.511 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 159 17-02-28 20:23:16.511 -08 000000095 INF: ===================Camera #2 Frame #159=================== 17-02-28 20:23:16.535 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:16.548 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:16.609 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:16.629 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163. 17-02-28 20:23:16.629 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163 17-02-28 20:23:16.629 -08 000000037 INF: ===================Camera #0 Frame #163=================== 17-02-28 20:23:16.674 -08 000000046 INF: Y Motor: Unshifted Position: 3054448 17-02-28 20:23:16.683 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165. 17-02-28 20:23:16.683 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165 17-02-28 20:23:16.683 -08 000000095 INF: ===================Camera #2 Frame #165=================== 17-02-28 20:23:16.724 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:16.798 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169. 17-02-28 20:23:16.798 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169 17-02-28 20:23:16.798 -08 000000037 INF: ===================Camera #0 Frame #169=================== 17-02-28 20:23:16.848 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:16.852 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171. 17-02-28 20:23:16.852 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171 17-02-28 20:23:16.852 -08 000000095 INF: ===================Camera #2 Frame #171=================== 17-02-28 20:23:16.859 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:16.921 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:16.921 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)=================== 17-02-28 20:23:16.921 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-02-28 20:23:16.966 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175. 17-02-28 20:23:16.966 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175 17-02-28 20:23:16.966 -08 000000037 INF: ===================Camera #0 Frame #175=================== 17-02-28 20:23:16.986 -08 000000046 INF: Y Motor: Unshifted Position: 2851002 17-02-28 20:23:17.021 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177. 17-02-28 20:23:17.021 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177 17-02-28 20:23:17.021 -08 000000095 INF: ===================Camera #2 Frame #177=================== 17-02-28 20:23:17.036 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:17.134 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182. 17-02-28 20:23:17.134 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182 17-02-28 20:23:17.134 -08 000000037 INF: ===================Camera #0 Frame #182=================== 17-02-28 20:23:17.158 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:17.190 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184. 17-02-28 20:23:17.190 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184 17-02-28 20:23:17.190 -08 000000095 INF: ===================Camera #2 Frame #184=================== 17-02-28 20:23:17.297 -08 000000046 INF: Y Motor: Unshifted Position: 2647335 17-02-28 20:23:17.305 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188. 17-02-28 20:23:17.305 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188 17-02-28 20:23:17.305 -08 000000037 INF: ===================Camera #0 Frame #188=================== 17-02-28 20:23:17.347 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:17.362 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190. 17-02-28 20:23:17.362 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190 17-02-28 20:23:17.362 -08 000000095 INF: ===================Camera #2 Frame #190=================== 17-02-28 20:23:17.471 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:17.473 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194. 17-02-28 20:23:17.473 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194 17-02-28 20:23:17.473 -08 000000037 INF: ===================Camera #0 Frame #194=================== 17-02-28 20:23:17.531 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196. 17-02-28 20:23:17.531 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196 17-02-28 20:23:17.531 -08 000000095 INF: ===================Camera #2 Frame #196=================== 17-02-28 20:23:17.607 -08 000000046 INF: Y Motor: Unshifted Position: 2445838 17-02-28 20:23:17.641 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200. 17-02-28 20:23:17.641 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200 17-02-28 20:23:17.641 -08 000000037 INF: ===================Camera #0 Frame #200=================== 17-02-28 20:23:17.657 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:17.700 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202. 17-02-28 20:23:17.700 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202 17-02-28 20:23:17.700 -08 000000095 INF: ===================Camera #2 Frame #202=================== 17-02-28 20:23:17.784 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:17.809 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-02-28 20:23:17.809 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-02-28 20:23:17.809 -08 000000037 INF: ===================Camera #0 Frame #206=================== 17-02-28 20:23:17.869 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209. 17-02-28 20:23:17.869 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209 17-02-28 20:23:17.869 -08 000000095 INF: ===================Camera #2 Frame #209=================== 17-02-28 20:23:17.920 -08 000000046 INF: Y Motor: Unshifted Position: 2242179 17-02-28 20:23:17.970 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:17.977 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213. 17-02-28 20:23:17.977 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213 17-02-28 20:23:17.977 -08 000000037 INF: ===================Camera #0 Frame #213=================== 17-02-28 20:23:18.021 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 17-02-28 20:23:18.041 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215. 17-02-28 20:23:18.041 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215 17-02-28 20:23:18.041 -08 000000095 INF: ===================Camera #2 Frame #215=================== 17-02-28 20:23:18.094 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:18.108 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:18.161 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219. 17-02-28 20:23:18.162 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219 17-02-28 20:23:18.163 -08 000000037 INF: ===================Camera #0 Frame #219=================== 17-02-28 20:23:18.208 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:18.210 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221. 17-02-28 20:23:18.210 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221 17-02-28 20:23:18.210 -08 000000095 INF: ===================Camera #2 Frame #221=================== 17-02-28 20:23:18.232 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:18.233 -08 000000046 INF: Y Motor: Unshifted Position: 2038725 17-02-28 20:23:18.283 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:18.333 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226. 17-02-28 20:23:18.333 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226 17-02-28 20:23:18.333 -08 000000037 INF: ===================Camera #0 Frame #226=================== 17-02-28 20:23:18.379 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227. 17-02-28 20:23:18.379 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227 17-02-28 20:23:18.379 -08 000000095 INF: ===================Camera #2 Frame #227=================== 17-02-28 20:23:18.407 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:18.482 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:18.504 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232. 17-02-28 20:23:18.504 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232 17-02-28 20:23:18.504 -08 000000037 INF: ===================Camera #0 Frame #232=================== 17-02-28 20:23:18.542 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:18.542 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:23:18.542 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 17-02-28 20:23:18.543 -08 000000046 INF: Y Motor: Unshifted Position: 1837007 17-02-28 20:23:18.548 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234. 17-02-28 20:23:18.548 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234 17-02-28 20:23:18.548 -08 000000095 INF: ===================Camera #2 Frame #234=================== 17-02-28 20:23:18.593 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:18.672 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238. 17-02-28 20:23:18.672 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238 17-02-28 20:23:18.672 -08 000000037 INF: ===================Camera #0 Frame #238=================== 17-02-28 20:23:18.720 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:18.720 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240. 17-02-28 20:23:18.720 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240 17-02-28 20:23:18.720 -08 000000095 INF: ===================Camera #2 Frame #240=================== 17-02-28 20:23:18.840 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244. 17-02-28 20:23:18.840 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244 17-02-28 20:23:18.840 -08 000000037 INF: ===================Camera #0 Frame #244=================== 17-02-28 20:23:18.858 -08 000000046 INF: Y Motor: Unshifted Position: 1632680 17-02-28 20:23:18.889 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246. 17-02-28 20:23:18.889 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246 17-02-28 20:23:18.889 -08 000000095 INF: ===================Camera #2 Frame #246=================== 17-02-28 20:23:18.908 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:18.915 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:23:18.915 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:23:18.916 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash=================== 17-02-28 20:23:18.916 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle=================== 17-02-28 20:23:18.917 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:18.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:18.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:18.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°=================== 17-02-28 20:23:18.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°=================== 17-02-28 20:23:18.919 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°, FC temperature to 60°=================== 17-02-28 20:23:19.008 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251. 17-02-28 20:23:19.008 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251 17-02-28 20:23:19.008 -08 000000037 INF: ===================Camera #0 Frame #251=================== 17-02-28 20:23:19.030 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:19.059 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252. 17-02-28 20:23:19.059 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252 17-02-28 20:23:19.059 -08 000000095 INF: ===================Camera #2 Frame #252=================== 17-02-28 20:23:19.164 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°=================== 17-02-28 20:23:19.164 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°=================== 17-02-28 20:23:19.165 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°=================== 17-02-28 20:23:19.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°=================== 17-02-28 20:23:19.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:19.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:19.167 -08 000000046 INF: Y Motor: Unshifted Position: 1431184 17-02-28 20:23:19.167 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:19.167 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:19.179 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257. 17-02-28 20:23:19.179 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257 17-02-28 20:23:19.179 -08 000000037 INF: ===================Camera #0 Frame #257=================== 17-02-28 20:23:19.217 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:19.228 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259. 17-02-28 20:23:19.228 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259 17-02-28 20:23:19.228 -08 000000095 INF: ===================Camera #2 Frame #259=================== 17-02-28 20:23:19.232 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:19.232 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Selecting Reagent HIM (1)=================== 17-02-28 20:23:19.232 -08 000000018 INF: Valve A1: Go to position 1 17-02-28 20:23:19.232 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-02-28 20:23:19.293 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 5\r 17-02-28 20:23:19.293 -08 000000018 INF: Valve A1: 17.345 seconds since last move, > 10.000 seconds required between moves 17-02-28 20:23:19.293 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 5 to 1 17-02-28 20:23:19.293 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC1\r 17-02-28 20:23:19.293 -08 000000018 INF: SerialPort A1 (VICIA1): Recv (discarded) 17-02-28 20:23:19.293 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r 17-02-28 20:23:19.344 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:19.349 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263. 17-02-28 20:23:19.349 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263 17-02-28 20:23:19.349 -08 000000037 INF: ===================Camera #0 Frame #263=================== 17-02-28 20:23:19.401 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265. 17-02-28 20:23:19.401 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265 17-02-28 20:23:19.401 -08 000000095 INF: ===================Camera #2 Frame #265=================== 17-02-28 20:23:19.480 -08 000000046 INF: Y Motor: Unshifted Position: 1227499 17-02-28 20:23:19.518 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269. 17-02-28 20:23:19.518 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269 17-02-28 20:23:19.518 -08 000000037 INF: ===================Camera #0 Frame #269=================== 17-02-28 20:23:19.530 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:19.572 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271. 17-02-28 20:23:19.572 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271 17-02-28 20:23:19.572 -08 000000095 INF: ===================Camera #2 Frame #271=================== 17-02-28 20:23:19.602 -08 000000078 INF: FPGA: Recv TDIYWAIT 17-02-28 20:23:19.602 -08 000000059 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:23:19.604 -08 000000059 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-02-28 20:23:19.605 -08 000000101 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-02-28 20:23:19.605 -08 000000082 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-02-28 20:23:19.605 -08 000000101 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-02-28 20:23:19.605 -08 000000101 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-02-28 20:23:19.605 -08 000000101 INF: Excitation Filter 1: Moving 107 steps 17-02-28 20:23:19.605 -08 000000101 INF: FPGA: Xmit EX1MV 107\n 17-02-28 20:23:19.605 -08 000000082 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-02-28 20:23:19.605 -08 000000082 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-02-28 20:23:19.605 -08 000000082 INF: Excitation Filter 2: Moving 107 steps 17-02-28 20:23:19.606 -08 000000082 INF: FPGA: Xmit EX2MV 107\n 17-02-28 20:23:19.654 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:19.687 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:23:19.687 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:23:19.687 -08 000000037 INF: ===================Camera #0 Frame #272=================== 17-02-28 20:23:19.697 -08 000000037 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:23:19.698 -08 000000037 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:23:19.794 -08 000000046 INF: Y Motor: Unshifted Position: 1024060 17-02-28 20:23:19.831 -08 000000037 INF: Camera #0 ReleaseBuffer 17-02-28 20:23:19.831 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:23:19.831 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:23:19.831 -08 000000095 INF: ===================Camera #2 Frame #272=================== 17-02-28 20:23:19.831 -08 000000037 INF: ===================Camera TDI=================== 17-02-28 20:23:19.835 -08 000000095 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:23:19.836 -08 000000095 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:23:19.844 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:19.854 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is = 1\r 17-02-28 20:23:19.854 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:19.854 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 17-02-28 20:23:19.860 -08 000000037 INF: ====================================== 17-02-28 20:23:19.977 -08 000000058 INF: FPGA: Recv EX1MV 17-02-28 20:23:19.977 -08 000000101 INF: Excitation Filter 1: Moved 107 steps in 371.7949 ms 17-02-28 20:23:19.977 -08 000000101 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.912 ms 17-02-28 20:23:19.977 -08 000000101 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.0967 ms 17-02-28 20:23:19.977 -08 000000101 INF: ====================================== 17-02-28 20:23:19.979 -08 000000046 INF: Y Motor: Unshifted Position: 990888 17-02-28 20:23:19.979 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:23:19.979 -08 000000046 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:20.014 -08 000000095 INF: Camera #2 ReleaseBuffer 17-02-28 20:23:20.014 -08 000000095 INF: ===================Camera TDI=================== 17-02-28 20:23:20.043 -08 000000046 INF: Y Motor: Recv v 0\r 17-02-28 20:23:20.043 -08 000000046 INF: Y Motor: Moved to 14.9089 after 7862 ms 17-02-28 20:23:20.043 -08 000000046 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:23:20.044 -08 000000077 INF: FPGA: Recv EX2MV 17-02-28 20:23:20.044 -08 000000082 INF: Excitation Filter 2: Moved 107 steps in 438.8365 ms 17-02-28 20:23:20.044 -08 000000082 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 438.9474 ms 17-02-28 20:23:20.044 -08 000000082 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 439.3329 ms 17-02-28 20:23:20.045 -08 000000082 INF: ====================================== 17-02-28 20:23:20.046 -08 000000059 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:23:20.047 -08 000000059 INF: ====================================== 17-02-28 20:23:20.049 -08 000000095 INF: ====================================== 17-02-28 20:23:20.050 -08 000000104 INF: ===================Camera TDI=================== 17-02-28 20:23:20.051 -08 000000104 INF: ====================================== 17-02-28 20:23:20.103 -08 000000046 INF: Y Motor: Recv v 4097\r 17-02-28 20:23:20.103 -08 000000046 INF: Y Motor: Status After move finished OK: 17-02-28 20:23:20.103 -08 000000046 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:20.168 -08 000000046 INF: Y Motor: Recv v 0\r 17-02-28 20:23:20.168 -08 000000046 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:20.168 -08 000000046 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:23:20.230 -08 000000046 INF: Y Motor: Recv v 134217728\r 17-02-28 20:23:20.230 -08 000000046 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-02-28 20:23:20.230 -08 000000046 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:23:20.230 -08 000000046 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:23:20.294 -08 000000046 INF: Y Motor: Recv v 0\r 17-02-28 20:23:20.294 -08 000000046 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:23:20.294 -08 000000046 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:23:20.294 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:20.354 -08 000000046 INF: Y Motor: Recv ok\r 17-02-28 20:23:20.354 -08 000000046 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:23:20.354 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:20.418 -08 000000046 INF: Y Motor: Recv ok\r 17-02-28 20:23:20.418 -08 000000046 INF: ====================================== 17-02-28 20:23:20.419 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:20.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:20.421 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:20.421 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-02-28 20:23:20.476 -08 000000069 INF: FPGA: Recv TDICLINES 1023 17-02-28 20:23:20.476 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:23:20.539 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:20.539 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-02-28 20:23:20.540 -08 000000066 INF: FPGA: Recv TDIYERD 1490889 17-02-28 20:23:20.541 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-02-28 20:23:20.542 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:20.603 -08 000000085 INF: FPGA: Recv ZADCR 35359 17-02-28 20:23:20.603 -08 000000042 INF: At scan end Y pos = 14.909 and Z pos = -0.135. Y moved -48.539 mm 17-02-28 20:23:20.603 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-02-28 20:23:20.604 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:20.612 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 1, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 50, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000 17-02-28 20:23:20.665 -08 000000060 INF: FPGA: Recv TDIPULSES 139265 17-02-28 20:23:20.665 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-02-28 20:23:20.665 -08 000000042 INF: TDIScan finished after 12627.0509 ms 17-02-28 20:23:20.665 -08 000000042 INF: Image[0]: Y should trigger at 63.448 mm, 2nd row was at 64.357 mm (error = 0.909 mm) 17-02-28 20:23:20.665 -08 000000042 INF: Image[2]: Y should trigger at 63.448 mm, 2nd row was at 64.357 mm (error = 0.909 mm) 17-02-28 20:23:20.667 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:20.701 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.521 um 17-02-28 20:23:20.701 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:20.702 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-02-28 20:23:20.704 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:23:20.727 -08 000000058 INF: FPGA: Recv SWOOF_RDSTAT 0 17-02-28 20:23:20.728 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:20.728 -08 000000062 INF: ===================Set YMotor gains for fast moves=================== 17-02-28 20:23:20.728 -08 000000064 INF: ===================Dither Clean Up Command=================== 17-02-28 20:23:20.728 -08 000000051 INF: ===================Set Z Motor Motor Velocity=================== 17-02-28 20:23:20.729 -08 000000051 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-02-28 20:23:20.729 -08 000000051 INF: FPGA: Xmit ZSTEP 1288471\n 17-02-28 20:23:20.729 -08 000000062 INF: ====================================== 17-02-28 20:23:20.729 -08 000000104 INF: ===================Set Y Motor Motor Velocity=================== 17-02-28 20:23:20.729 -08 000000104 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:23:20.729 -08 000000104 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:23:20.729 -08 000000095 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:23:20.730 -08 000000066 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:23:20.730 -08 000000066 INF: FPGA: Xmit ZSEL 0\n 17-02-28 20:23:20.733 -08 000000095 INF: ===================LFT:Extracting coords=================== 17-02-28 20:23:20.758 -08 000000095 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:23:20.759 -08 000000095 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-02-28 20:23:20.759 -08 000000059 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:20.760 -08 000000060 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:20.760 -08 000000105 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:20.760 -08 000000087 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:20.760 -08 000000059 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:23:20.760 -08 000000060 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:23:20.760 -08 000000105 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:23:20.760 -08 000000087 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:23:20.790 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 17-02-28 20:23:20.790 -08 000000018 INF: Current Position of Pump is: 0 17-02-28 20:23:20.791 -08 000000104 INF: Y Motor: Recv ok\r 17-02-28 20:23:20.791 -08 000000104 INF: ====================================== 17-02-28 20:23:20.791 -08 000000033 INF: FPGA: Recv ZSTEP 17-02-28 20:23:20.791 -08 000000033 INF: FPGA: Recv ZSEL 17-02-28 20:23:20.792 -08 000000066 INF: FPGA: Xmit ZDACW 40860\n 17-02-28 20:23:20.792 -08 000000051 INF: ====================================== 17-02-28 20:23:20.834 -08 000000059 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:23:20.834 -08 000000060 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:23:20.834 -08 000000105 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:23:20.834 -08 000000087 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:23:20.851 -08 000000062 INF: FPGA: Recv ZDACW 17-02-28 20:23:20.852 -08 000000066 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-02-28 20:23:20.852 -08 000000066 INF: FPGA: Xmit TDIBB 0\n 17-02-28 20:23:20.890 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r 17-02-28 20:23:20.913 -08 000000030 INF: FPGA: Recv TDIBB 17-02-28 20:23:20.913 -08 000000066 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:23:20.914 -08 000000066 INF: ====================================== 17-02-28 20:23:20.976 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:20.985 -08 000000060 INF: LFT found best fwhm score 3.402823E+38 in 151 ms 17-02-28 20:23:20.985 -08 000000060 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.157453930538226 in the next cycle, cycle 4 FC:B, C:3,L:3,T 17-02-28 20:23:20.985 -08 000000059 INF: LFT found best fwhm score 2.00003 in 151 ms 17-02-28 20:23:20.985 -08 000000059 INF: LFT found good score at index 1821 with fwhm value 2.00003. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:3,T 17-02-28 20:23:20.985 -08 000000087 INF: LFT found best fwhm score 2.120251 in 151 ms 17-02-28 20:23:20.985 -08 000000087 INF: LFT found good score at index 7185 with fwhm value 2.120251. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:3,T 17-02-28 20:23:20.986 -08 000000105 INF: LFT found best fwhm score 2.000003 in 152 ms 17-02-28 20:23:20.986 -08 000000059 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:20.986 -08 000000105 INF: LFT found good score at index 7381 with fwhm value 2.000003. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:3,T 17-02-28 20:23:20.986 -08 000000060 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:20.986 -08 000000087 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:20.986 -08 000000105 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:20.986 -08 000000059 INF: ====================================== 17-02-28 20:23:20.986 -08 000000060 INF: ====================================== 17-02-28 20:23:20.986 -08 000000087 INF: ====================================== 17-02-28 20:23:20.986 -08 000000105 INF: ====================================== 17-02-28 20:23:20.987 -08 000000095 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:23:20.988 -08 000000095 INF: LFT weighted average best Z for top surface is at -0.157mm FC:B, C:3,L:3,T 17-02-28 20:23:20.988 -08 000000095 INF: ====================================== 17-02-28 20:23:20.990 -08 000000064 INF: ====================================== 17-02-28 20:23:20.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:20.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-02-28 20:23:20.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:20.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-02-28 20:23:20.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:20.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-02-28 20:23:20.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:20.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-02-28 20:23:20.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:20.993 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308=================== 17-02-28 20:23:20.993 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308=================== 17-02-28 20:23:20.994 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Waiting for image analysis=================== 17-02-28 20:23:20.994 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-02-28 20:23:20.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Waiting for image analysis=================== 17-02-28 20:23:20.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308=================== 17-02-28 20:23:21.017 -08 000000042 INF: Waited 24 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 17-02-28 20:23:21.017 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:23:21.018 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:21.018 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:23:21.018 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-02-28 20:23:21.018 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3=================== 17-02-28 20:23:21.019 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface=================== 17-02-28 20:23:21.062 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":3,"Tile":1201,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF264","HCSMMF220","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.067 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:21.068 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:21.068 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:23:21.068 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:23:21.115 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:21.163 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":3,"Tile":1206,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF284","HCSMMF217","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.167 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:23:21.179 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:21.180 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:21.180 -08 000000042 INF: Compensator: Moving OutOfPath 17-02-28 20:23:21.180 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n 17-02-28 20:23:21.182 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":3,"Tile":1203,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF270","HCSMMF255","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.293 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":3,"Tile":1204,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF278","HCSMMF232","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.298 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":3,"Tile":1205,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF188","HCSMMF213","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.302 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":3,"Tile":1209,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF211","HCSMMF224","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.304 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":3,"Tile":1202,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF207","HCSMMF235","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.307 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":3,"Tile":1208,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF242","HCSMMF180","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.311 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":3,"Tile":1210,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF252","HCSMMF209","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.313 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":3,"Tile":1212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF185","HCSMMF268","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.314 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":3,"Tile":1207,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF201","HCSMMF240","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.315 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":3,"Tile":1211,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF259","HCSMMF184","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.315 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":3,"Tile":1213,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF226","HCSMMF253","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.316 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":3,"Tile":1218,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF187","HCSMMF202","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.317 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":3,"Tile":1214,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF251","HCSMMF203","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.318 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":3,"Tile":1220,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF281","HCSMMF272","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.318 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":3,"Tile":1219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF189","HCSMMF192","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.319 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":3,"Tile":1216,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF218","HCSMMF179","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.320 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":3,"Tile":1217,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF269","HCSMMF277","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.322 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":3,"Tile":1225,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF183","HCSMMF274","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.323 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":3,"Tile":1226,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF231","HCSMMF195","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.326 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":3,"Tile":1221,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF222","HCSMMF208","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.327 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":3,"Tile":1215,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF239","HCSMMF178","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.328 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":3,"Tile":1223,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF182","HCSMMF279","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.329 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":3,"Tile":1228,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF282","HCSMMF176","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.330 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":3,"Tile":1222,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF198","HCSMMF254","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.331 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":3,"Tile":1224,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF246","HCSMMF197","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.333 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":3,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF206","HCSMMF229","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:21.335 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:21.341 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-02-28 20:23:21.429 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:21.477 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:21.577 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r 17-02-28 20:23:21.582 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:21.582 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-02-28 20:23:21.600 -08 000000098 INF: FPGA: Recv MIOCOMPR 17-02-28 20:23:21.600 -08 000000042 INF: Compensator: Moved OutOfPath in 420 ms 17-02-28 20:23:21.600 -08 000000042 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908 17-02-28 20:23:21.601 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:21.602 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:21.603 -08 000000010 INF: ===================Move Tilt Motor 1=================== 17-02-28 20:23:21.603 -08 000000064 INF: ===================Move Tilt Motor 3=================== 17-02-28 20:23:21.603 -08 000000035 INF: ===================Move Tilt Motor 2=================== 17-02-28 20:23:21.603 -08 000000064 INF: ====================================== 17-02-28 20:23:21.603 -08 000000010 INF: ====================================== 17-02-28 20:23:21.604 -08 000000035 INF: ====================================== 17-02-28 20:23:21.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:21.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:21.612 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm. 17-02-28 20:23:21.620 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm. 17-02-28 20:23:21.620 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-02-28 20:23:21.620 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm. 17-02-28 20:23:21.620 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-02-28 20:23:21.621 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-02-28 20:23:21.622 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:21.627 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-02-28 20:23:21.628 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0 17-02-28 20:23:21.628 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format 17-02-28 20:23:21.628 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n 17-02-28 20:23:21.662 -08 000000037 INF: FPGA: Recv ZSTEP 17-02-28 20:23:21.662 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-02-28 20:23:21.663 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:21.663 -08 000000042 INF: Z Motor: Entering MoveAbsStepped 17-02-28 20:23:21.663 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1559 mm 17-02-28 20:23:21.663 -08 000000042 INF: FPGA: Xmit ZTRG 0\n 17-02-28 20:23:21.720 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:21.725 -08 000000072 INF: FPGA: Recv ZTRG 17-02-28 20:23:21.726 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-02-28 20:23:21.726 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n 17-02-28 20:23:21.763 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:21.786 -08 000000091 INF: FPGA: Recv ZYT 17-02-28 20:23:21.786 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-02-28 20:23:21.786 -08 000000042 INF: FPGA: Xmit ZMV 60292\n 17-02-28 20:23:21.811 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:21.817 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-02-28 20:23:21.848 -08 000000085 INF: FPGA: Recv @LOG Trigger Camera 17-02-28 20:23:21.848 -08 000000085 INF: FPGA: Recv ZMV 17-02-28 20:23:21.848 -08 000000006 INF: FPGA: Trigger Camera 17-02-28 20:23:21.848 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9705 ms 17-02-28 20:23:21.848 -08 000000042 INF: FPGA: Xmit ZDACR\n 17-02-28 20:23:21.849 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:21.849 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB=================== 17-02-28 20:23:21.911 -08 000000064 INF: FPGA: Recv ZDACR 60292 17-02-28 20:23:21.911 -08 000000042 INF: Z Motor: MoveAndTrigger took 248.296 ms w/comms 17-02-28 20:23:21.911 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:23:21.911 -08 000000042 INF: Z Motor: MoveAbsStepped took 248.4659 ms 17-02-28 20:23:21.911 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:21.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-02-28 20:23:21.912 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm. 17-02-28 20:23:21.920 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-02-28 20:23:21.920 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:23:21.920 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:23:21.920 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format 17-02-28 20:23:21.920 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n 17-02-28 20:23:21.949 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP9600R\r 17-02-28 20:23:21.975 -08 000000066 INF: FPGA: Recv ZSTEP 17-02-28 20:23:21.996 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-02-28 20:23:21.996 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm. 17-02-28 20:23:22.004 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm. 17-02-28 20:23:22.005 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:23:22.005 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm. 17-02-28 20:23:22.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:22.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Populating image tags=================== 17-02-28 20:23:22.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:22.007 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = D_1 17-02-28 20:23:22.008 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-02-28 20:23:22.008 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-02-28 20:23:22.009 -08 000000064 INF: ===================MoveEmissionFilters=================== 17-02-28 20:23:22.009 -08 000000023 INF: ===================Move X,Y=================== 17-02-28 20:23:22.010 -08 000000023 INF: ===================Move X,Y, Parallel=================== 17-02-28 20:23:22.010 -08 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:23:22.010 -08 000000062 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:23:22.010 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:23:22.010 -08 000000099 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:23:22.011 -08 000000085 INF: ===================Move X Motor without settling=================== 17-02-28 20:23:22.011 -08 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:23:22.011 -08 000000091 INF: ===================Move Y Motor without settling=================== 17-02-28 20:23:22.011 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:23:22.011 -08 000000085 INF: X Motor: Xmit PR VM\n 17-02-28 20:23:22.011 -08 000000099 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:23:22.011 -08 000000091 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9089 mm 17-02-28 20:23:22.011 -08 000000091 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:23:22.011 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:22.012 -08 000000101 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-02-28 20:23:22.012 -08 000000109 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-02-28 20:23:22.012 -08 000000105 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-02-28 20:23:22.012 -08 000000060 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-02-28 20:23:22.012 -08 000000072 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-02-28 20:23:22.012 -08 000000073 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-02-28 20:23:22.012 -08 000000101 INF: ====================================== 17-02-28 20:23:22.012 -08 000000105 INF: Emission Filter 12: Remaining IntoPath 17-02-28 20:23:22.012 -08 000000060 INF: ====================================== 17-02-28 20:23:22.013 -08 000000072 INF: ====================================== 17-02-28 20:23:22.013 -08 000000105 INF: ====================================== 17-02-28 20:23:22.013 -08 000000109 INF: ====================================== 17-02-28 20:23:22.013 -08 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:23:22.013 -08 000000062 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:23:22.014 -08 000000108 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-02-28 20:23:22.014 -08 000000045 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-02-28 20:23:22.015 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:23:22.015 -08 000000045 INF: ====================================== 17-02-28 20:23:22.015 -08 000000078 INF: ====================================== 17-02-28 20:23:22.015 -08 000000073 INF: ====================================== 17-02-28 20:23:22.016 -08 000000108 INF: ====================================== 17-02-28 20:23:22.016 -08 000000095 INF: ====================================== 17-02-28 20:23:22.017 -08 000000099 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:23:22.017 -08 000000062 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:23:22.018 -08 000000099 INF: ====================================== 17-02-28 20:23:22.018 -08 000000062 INF: ====================================== 17-02-28 20:23:22.019 -08 000000064 INF: ====================================== 17-02-28 20:23:22.038 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:22.039 -08 000000091 INF: Y Motor: Recv ok\r 17-02-28 20:23:22.039 -08 000000091 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:23:22.039 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:22.100 -08 000000091 INF: Y Motor: Recv ok\r 17-02-28 20:23:22.100 -08 000000091 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:22.101 -08 000000085 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-02-28 20:23:22.101 -08 000000085 INF: X Motor: Xmit PR VI\n 17-02-28 20:23:22.138 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:22.161 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:22.162 -08 000000091 INF: Y Motor: Recv v 0\r 17-02-28 20:23:22.162 -08 000000091 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:22.162 -08 000000091 INF: Y Motor: Set target position to 5953351 encoder counts 17-02-28 20:23:22.162 -08 000000091 INF: Y Motor: Xmit s r0xca 5953351\r 17-02-28 20:23:22.164 -08 000000085 INF: X Motor: Recv PR VI\r\n410\r\n> 17-02-28 20:23:22.164 -08 000000085 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-02-28 20:23:22.164 -08 000000085 INF: X Motor: Moving to 77.4806 mm @15.000 mm/sec, started at 75.2500 mm 17-02-28 20:23:22.164 -08 000000085 INF: X Motor: Xmit MA 7570\n 17-02-28 20:23:22.191 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-02-28 20:23:22.227 -08 000000085 INF: X Motor: Recv MA 7570\r\n> 17-02-28 20:23:22.227 -08 000000091 INF: Y Motor: Recv ok\r 17-02-28 20:23:22.227 -08 000000085 INF: X Motor: WaitUntilStopped 60149 17-02-28 20:23:22.227 -08 000000091 INF: Y Motor: Start the move command 17-02-28 20:23:22.227 -08 000000091 INF: Y Motor: Xmit t 1\r 17-02-28 20:23:22.289 -08 000000091 INF: Y Motor: Recv ok\r 17-02-28 20:23:22.289 -08 000000091 INF: Y Motor: WaitUntilStopped 61985 17-02-28 20:23:22.289 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:22.411 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:22.414 -08 000000091 INF: Y Motor: Unshifted Position: 1071973 17-02-28 20:23:22.464 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:22.473 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:22.587 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:22.723 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:22.725 -08 000000091 INF: Y Motor: Unshifted Position: 1776717 17-02-28 20:23:22.775 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:22.787 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:22.852 -08 000000085 INF: X Motor: Xmit PR ER\n 17-02-28 20:23:22.902 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:22.911 -08 000000085 INF: X Motor: Recv PR ER\r\n0\r\n> 17-02-28 20:23:22.911 -08 000000085 INF: X Motor: Moved to 77.4814 after 684 ms 17-02-28 20:23:22.911 -08 000000085 INF: ====================================== 17-02-28 20:23:23.037 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:23.037 -08 000000091 INF: Y Motor: Unshifted Position: 2557576 17-02-28 20:23:23.087 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:23.097 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:23.211 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:23.347 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:23.350 -08 000000091 INF: Y Motor: Unshifted Position: 3340016 17-02-28 20:23:23.400 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:23.418 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:23.524 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:23.662 -08 000000091 INF: Y Motor: Unshifted Position: 4120922 17-02-28 20:23:23.668 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:23.712 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:23.721 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:23.838 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:23.971 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:23.974 -08 000000091 INF: Y Motor: Unshifted Position: 4900860 17-02-28 20:23:24.024 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:24.035 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:24.148 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:24.284 -08 000000091 INF: Y Motor: Unshifted Position: 5680166 17-02-28 20:23:24.285 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:24.334 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:24.345 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:24.462 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:24.595 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:24.596 -08 000000091 INF: Y Motor: Unshifted Position: 5953353 17-02-28 20:23:24.596 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:23:24.596 -08 000000091 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:24.657 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:24.658 -08 000000091 INF: Y Motor: Recv v 0\r 17-02-28 20:23:24.658 -08 000000091 INF: Y Motor: Moved to 64.5335 after 2369 ms 17-02-28 20:23:24.658 -08 000000091 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:23:24.721 -08 000000091 INF: Y Motor: Recv v 4096\r 17-02-28 20:23:24.721 -08 000000091 INF: Y Motor: Status After move finished OK: 17-02-28 20:23:24.721 -08 000000091 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:24.784 -08 000000091 INF: Y Motor: Recv v 0\r 17-02-28 20:23:24.784 -08 000000091 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:24.784 -08 000000091 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:23:24.845 -08 000000091 INF: Y Motor: Recv v 402653184\r 17-02-28 20:23:24.845 -08 000000091 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-02-28 20:23:24.845 -08 000000091 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:23:24.845 -08 000000091 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:23:24.907 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:24.910 -08 000000091 INF: Y Motor: Recv v 0\r 17-02-28 20:23:24.910 -08 000000091 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:23:24.910 -08 000000091 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:23:24.910 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:24.971 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:24.973 -08 000000091 INF: Y Motor: Recv ok\r 17-02-28 20:23:24.973 -08 000000091 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:23:24.973 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:25.034 -08 000000091 INF: Y Motor: Recv ok\r 17-02-28 20:23:25.034 -08 000000091 INF: ====================================== 17-02-28 20:23:25.035 -08 000000023 INF: ===================Move X,Y=================== 17-02-28 20:23:25.036 -08 000000023 INF: ====================================== 17-02-28 20:23:25.038 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors=================== 17-02-28 20:23:25.038 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:25.039 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec 17-02-28 20:23:25.039 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r 17-02-28 20:23:25.096 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:23:25.096 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n 17-02-28 20:23:25.158 -08 000000073 INF: FPGA: Recv ZFREQCL 17-02-28 20:23:25.158 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions=================== 17-02-28 20:23:25.158 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:25.159 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:23:25.220 -08 000000069 INF: FPGA: Recv TDIYERD 6453352 17-02-28 20:23:25.220 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm) 17-02-28 20:23:25.221 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:23:25.221 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:25.221 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:23:25.222 -08 000000010 INF: ===================Set YMotor gains for scans=================== 17-02-28 20:23:25.222 -08 000000064 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:25.222 -08 000000010 INF: ====================================== 17-02-28 20:23:25.223 -08 000000064 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-02-28 20:23:25.223 -08 000000064 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:25.225 -08 000000064 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-02-28 20:23:25.225 -08 000000064 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-02-28 20:23:25.225 -08 000000064 INF: FPGA: Xmit TDIYPOS 6433351\n 17-02-28 20:23:25.280 -08 000000073 INF: FPGA: Recv TDIYPOS 17-02-28 20:23:25.280 -08 000000064 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-02-28 20:23:25.281 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:25.283 -08 000000064 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI=================== 17-02-28 20:23:25.283 -08 000000064 INF: FPGA: Xmit TDIYARM2 3072 1 1\n 17-02-28 20:23:25.345 -08 000000082 INF: FPGA: Recv TDIYARM2 17-02-28 20:23:25.346 -08 000000064 INF: ===================TDI Scan Setup, Arm FPGA=================== 17-02-28 20:23:25.347 -08 000000064 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:25.350 -08 000000064 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-02-28 20:23:25.350 -08 000000064 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:25.352 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-02-28 20:23:25.353 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-02-28 20:23:25.353 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:23:25.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:25.595 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:25.723 -08 000000064 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-02-28 20:23:25.724 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072 17-02-28 20:23:25.724 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:23:25.739 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-02-28 20:23:25.742 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:23:25.845 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:25.906 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:26.121 -08 000000064 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400, 17-02-28 20:23:26.121 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072 17-02-28 20:23:26.121 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:23:26.136 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial=================== 17-02-28 20:23:26.138 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI=================== 17-02-28 20:23:26.139 -08 000000064 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:26.140 -08 000000064 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:26.141 -08 000000064 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-02-28 20:23:26.142 -08 000000064 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:26.143 -08 000000064 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-02-28 20:23:26.143 -08 000000064 INF: Z Motor: Entering ArmAbsStepped 17-02-28 20:23:26.144 -08 000000064 INF: Z Motor: Arming to move to -0.0100 mm 17-02-28 20:23:26.144 -08 000000064 INF: FPGA: Xmit ZYT 0 2\n 17-02-28 20:23:26.156 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:26.156 -08 000000010 INF: FPGA: Recv ZYT 17-02-28 20:23:26.156 -08 000000064 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines) 17-02-28 20:23:26.156 -08 000000064 INF: FPGA: Xmit ZARM 2621\n 17-02-28 20:23:26.216 -08 000000099 INF: FPGA: Recv ZARM 17-02-28 20:23:26.216 -08 000000064 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.5717 ms 17-02-28 20:23:26.216 -08 000000064 INF: Z Motor: ArmAbsStepped took 72.5437 ms 17-02-28 20:23:26.216 -08 000000064 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:26.217 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:26.218 -08 000000064 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:26.219 -08 000000064 INF: ====================================== 17-02-28 20:23:26.220 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:23:26.221 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:26.222 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:26.222 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:26.223 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:26.224 -08 000000095 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-02-28 20:23:26.225 -08 000000077 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-02-28 20:23:26.225 -08 000000095 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-02-28 20:23:26.225 -08 000000095 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-02-28 20:23:26.225 -08 000000095 INF: Excitation Filter 2: Moving -107 steps 17-02-28 20:23:26.225 -08 000000077 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-02-28 20:23:26.225 -08 000000077 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-02-28 20:23:26.225 -08 000000077 INF: Excitation Filter 1: Moving -107 steps 17-02-28 20:23:26.225 -08 000000095 INF: FPGA: Xmit EX2MV -107\n 17-02-28 20:23:26.226 -08 000000077 INF: FPGA: Xmit EX1MV -107\n 17-02-28 20:23:26.468 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:26.532 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:26.593 -08 000000030 INF: FPGA: Recv EX2MV 17-02-28 20:23:26.593 -08 000000030 INF: FPGA: Recv EX1MV 17-02-28 20:23:26.593 -08 000000077 INF: Excitation Filter 1: Moved -107 steps in 367.3637 ms 17-02-28 20:23:26.593 -08 000000095 INF: Excitation Filter 2: Moved -107 steps in 367.5727 ms 17-02-28 20:23:26.593 -08 000000095 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.7385 ms 17-02-28 20:23:26.593 -08 000000095 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.8358 ms 17-02-28 20:23:26.594 -08 000000077 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.5062 ms 17-02-28 20:23:26.594 -08 000000077 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.9054 ms 17-02-28 20:23:26.594 -08 000000095 INF: ====================================== 17-02-28 20:23:26.594 -08 000000077 INF: ====================================== 17-02-28 20:23:26.595 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:26.596 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:26.597 -08 000000023 INF: ===================Serial=================== 17-02-28 20:23:26.597 -08 000000066 INF: ===================Camera TDI=================== 17-02-28 20:23:26.598 -08 000000010 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:23:26.598 -08 000000050 INF: ===================Move Y Motor without settling=================== 17-02-28 20:23:26.598 -08 000000023 INF: ===================Serial, FPGA Z Wait=================== 17-02-28 20:23:26.598 -08 000000023 INF: FPGA: Xmit ZWAIT\n 17-02-28 20:23:26.598 -08 000000066 INF: ===================Camera TDI, Parallel=================== 17-02-28 20:23:26.598 -08 000000050 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm 17-02-28 20:23:26.598 -08 000000050 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:23:26.599 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:26.599 -08 000000010 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-02-28 20:23:26.599 -08 000000078 INF: ===================Camera TDI=================== 17-02-28 20:23:26.599 -08 000000037 INF: ===================Camera TDI=================== 17-02-28 20:23:26.600 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:26.600 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:26.601 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:26.601 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:26.603 -08 000000010 INF: FPGA: Xmit TDIYWAIT\n 17-02-28 20:23:26.657 -08 000000050 INF: Y Motor: Recv ok\r 17-02-28 20:23:26.657 -08 000000050 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:23:26.657 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:26.718 -08 000000050 INF: Y Motor: Recv ok\r 17-02-28 20:23:26.718 -08 000000050 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:26.733 -08 000000098 INF: RunCopyService queue size at 2/28/2017 8:23:26 PM is 2 17-02-28 20:23:26.750 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:26.750 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:26.751 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:26.751 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:26.782 -08 000000050 INF: Y Motor: Recv v 0\r 17-02-28 20:23:26.782 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:26.782 -08 000000050 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:26.782 -08 000000050 INF: Y Motor: Set target position to 5797042 encoder counts 17-02-28 20:23:26.782 -08 000000050 INF: Y Motor: Xmit s r0xca 5797042\r 17-02-28 20:23:27.242 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:27.242 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:27.242 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:27.242 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:27.243 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:27.244 -08 000000050 INF: Y Motor: Recv ok\r 17-02-28 20:23:27.244 -08 000000050 INF: Y Motor: Start the move command 17-02-28 20:23:27.244 -08 000000050 INF: Y Motor: Xmit t 1\r 17-02-28 20:23:27.297 -08 000000050 INF: Y Motor: Recv ok\r 17-02-28 20:23:27.297 -08 000000050 INF: Y Motor: WaitUntilStopped 61042 17-02-28 20:23:27.297 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:27.392 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:27.392 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:27.393 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:27.393 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:27.422 -08 000000050 INF: Y Motor: Unshifted Position: 5936531 17-02-28 20:23:27.472 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:27.493 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:27.542 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-02-28 20:23:27.542 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-02-28 20:23:27.543 -08 000000078 INF: ===================Camera #2 Frame #1=================== 17-02-28 20:23:27.543 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1. 17-02-28 20:23:27.543 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1 17-02-28 20:23:27.543 -08 000000037 INF: ===================Camera #0 Frame #1=================== 17-02-28 20:23:27.545 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:27.596 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:27.698 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2. 17-02-28 20:23:27.698 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2 17-02-28 20:23:27.698 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2. 17-02-28 20:23:27.698 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2 17-02-28 20:23:27.698 -08 000000078 INF: ===================Camera #2 Frame #2=================== 17-02-28 20:23:27.698 -08 000000037 INF: ===================Camera #0 Frame #2=================== 17-02-28 20:23:27.732 -08 000000050 INF: Y Motor: Unshifted Position: 5889976 17-02-28 20:23:27.782 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:27.795 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:27.852 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-02-28 20:23:27.852 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-02-28 20:23:27.852 -08 000000078 INF: ===================Camera #2 Frame #3=================== 17-02-28 20:23:27.853 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3. 17-02-28 20:23:27.853 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3 17-02-28 20:23:27.853 -08 000000037 INF: ===================Camera #0 Frame #3=================== 17-02-28 20:23:27.857 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:27.908 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:28.008 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:23:28.008 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:23:28.008 -08 000000037 INF: ===================Camera #0 Frame #5=================== 17-02-28 20:23:28.009 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:23:28.009 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:23:28.009 -08 000000078 INF: ===================Camera #2 Frame #5=================== 17-02-28 20:23:28.045 -08 000000050 INF: Y Motor: Unshifted Position: 5842877 17-02-28 20:23:28.095 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:28.105 -08 000000059 INF: FPGA: Recv ZWAIT 17-02-28 20:23:28.106 -08 000000023 INF: ===================Serial=================== 17-02-28 20:23:28.107 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:28.107 -08 000000023 INF: ===================Serial, Confirm position Z Motor=================== 17-02-28 20:23:28.108 -08 000000023 INF: ===================Serial=================== 17-02-28 20:23:28.109 -08 000000023 INF: ====================================== 17-02-28 20:23:28.164 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-02-28 20:23:28.164 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-02-28 20:23:28.164 -08 000000037 INF: ===================Camera #0 Frame #6=================== 17-02-28 20:23:28.165 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6. 17-02-28 20:23:28.165 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6 17-02-28 20:23:28.165 -08 000000078 INF: ===================Camera #2 Frame #6=================== 17-02-28 20:23:28.167 -08 000000099 INF: FPGA: Recv TDIYWAIT 17-02-28 20:23:28.167 -08 000000010 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:23:28.167 -08 000000037 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-02-28 20:23:28.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:28.168 -08 000000037 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:23:28.168 -08 000000078 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames. 17-02-28 20:23:28.169 -08 000000010 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-02-28 20:23:28.169 -08 000000078 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:23:28.170 -08 000000073 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-02-28 20:23:28.170 -08 000000108 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-02-28 20:23:28.170 -08 000000073 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-02-28 20:23:28.170 -08 000000073 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-02-28 20:23:28.170 -08 000000073 INF: Excitation Filter 1: Moving 107 steps 17-02-28 20:23:28.170 -08 000000073 INF: FPGA: Xmit EX1MV 107\n 17-02-28 20:23:28.170 -08 000000108 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-02-28 20:23:28.170 -08 000000108 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-02-28 20:23:28.170 -08 000000108 INF: Excitation Filter 2: Moving 107 steps 17-02-28 20:23:28.173 -08 000000108 INF: FPGA: Xmit EX2MV 107\n 17-02-28 20:23:28.191 -08 000000037 INF: Camera #0 ReleaseBuffer 17-02-28 20:23:28.191 -08 000000037 INF: ===================Camera TDI=================== 17-02-28 20:23:28.192 -08 000000037 INF: ====================================== 17-02-28 20:23:28.216 -08 000000078 INF: Camera #2 ReleaseBuffer 17-02-28 20:23:28.216 -08 000000078 INF: ===================Camera TDI=================== 17-02-28 20:23:28.217 -08 000000078 INF: ====================================== 17-02-28 20:23:28.219 -08 000000066 INF: ===================Camera TDI=================== 17-02-28 20:23:28.220 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:28.220 -08 000000066 INF: ====================================== 17-02-28 20:23:28.358 -08 000000050 INF: Y Motor: Unshifted Position: 5797054 17-02-28 20:23:28.408 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:28.418 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:28.480 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:28.544 -08 000000104 INF: FPGA: Recv EX1MV 17-02-28 20:23:28.544 -08 000000104 INF: FPGA: Recv EX2MV 17-02-28 20:23:28.544 -08 000000108 INF: Excitation Filter 2: Moved 107 steps in 373.444 ms 17-02-28 20:23:28.544 -08 000000073 INF: Excitation Filter 1: Moved 107 steps in 373.7052 ms 17-02-28 20:23:28.544 -08 000000073 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.8656 ms 17-02-28 20:23:28.544 -08 000000073 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.9371 ms 17-02-28 20:23:28.544 -08 000000108 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.6067 ms 17-02-28 20:23:28.544 -08 000000108 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 374.015 ms 17-02-28 20:23:28.545 -08 000000073 INF: ====================================== 17-02-28 20:23:28.545 -08 000000108 INF: ====================================== 17-02-28 20:23:28.546 -08 000000050 INF: Y Motor: Unshifted Position: 5797043 17-02-28 20:23:28.546 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:23:28.546 -08 000000050 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:28.546 -08 000000010 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:23:28.547 -08 000000010 INF: ====================================== 17-02-28 20:23:28.610 -08 000000050 INF: Y Motor: Recv v 0\r 17-02-28 20:23:28.610 -08 000000050 INF: Y Motor: Moved to 62.9704 after 1313 ms 17-02-28 20:23:28.610 -08 000000050 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:23:28.669 -08 000000050 INF: Y Motor: Recv v 4097\r 17-02-28 20:23:28.669 -08 000000050 INF: Y Motor: Status After move finished OK: 17-02-28 20:23:28.669 -08 000000050 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:28.730 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:28.731 -08 000000050 INF: Y Motor: Recv v 0\r 17-02-28 20:23:28.731 -08 000000050 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:28.731 -08 000000050 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:23:28.794 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:28.797 -08 000000050 INF: Y Motor: Recv v 134217728\r 17-02-28 20:23:28.797 -08 000000050 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-02-28 20:23:28.797 -08 000000050 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:23:28.797 -08 000000050 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:23:28.857 -08 000000050 INF: Y Motor: Recv v 0\r 17-02-28 20:23:28.857 -08 000000050 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:23:28.857 -08 000000050 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:23:28.857 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:28.920 -08 000000050 INF: Y Motor: Recv ok\r 17-02-28 20:23:28.920 -08 000000050 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:23:28.920 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:28.982 -08 000000050 INF: Y Motor: Recv ok\r 17-02-28 20:23:28.982 -08 000000050 INF: ====================================== 17-02-28 20:23:28.983 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:28.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:28.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:28.986 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-02-28 20:23:29.042 -08 000000101 INF: FPGA: Recv TDICLINES 1023 17-02-28 20:23:29.042 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:23:29.044 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:29.104 -08 000000077 INF: FPGA: Recv TDIYERD 6297043 17-02-28 20:23:29.104 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-02-28 20:23:29.105 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:29.166 -08 000000082 INF: FPGA: Recv ZADCR 2421 17-02-28 20:23:29.166 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm 17-02-28 20:23:29.166 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-02-28 20:23:29.228 -08 000000037 INF: FPGA: Recv TDIPULSES 3073 17-02-28 20:23:29.228 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072 17-02-28 20:23:29.228 -08 000000042 INF: TDIScan finished after 7231.6774 ms 17-02-28 20:23:29.228 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-02-28 20:23:29.228 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm) 17-02-28 20:23:29.229 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-02-28 20:23:29.290 -08 000000010 INF: FPGA: Recv SWOOF_RDSTAT 0 17-02-28 20:23:29.291 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:29.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:29.292 -08 000000058 INF: ===================Set YMotor gains for fast moves=================== 17-02-28 20:23:29.292 -08 000000072 INF: ===================Set Z Motor Motor Velocity=================== 17-02-28 20:23:29.293 -08 000000077 INF: ===================Set Y Motor Motor Velocity=================== 17-02-28 20:23:29.293 -08 000000058 INF: ====================================== 17-02-28 20:23:29.293 -08 000000077 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:23:29.293 -08 000000077 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:23:29.294 -08 000000072 INF: ====================================== 17-02-28 20:23:29.355 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:29.356 -08 000000077 INF: Y Motor: Recv ok\r 17-02-28 20:23:29.356 -08 000000077 INF: ====================================== 17-02-28 20:23:29.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:29.358 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:29.359 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(A)=================== 17-02-28 20:23:29.404 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:29.404 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(G)=================== 17-02-28 20:23:29.417 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:29.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:29.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(T)=================== 17-02-28 20:23:29.448 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:29.449 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(C)=================== 17-02-28 20:23:29.471 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C=================== 17-02-28 20:23:29.472 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-02-28 20:23:29.472 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-02-28 20:23:29.473 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, ETF: Extracting coords=================== 17-02-28 20:23:29.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-02-28 20:23:29.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point=================== 17-02-28 20:23:29.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point, Extracting metrics=================== 17-02-28 20:23:29.667 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:29.729 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:29.979 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:30.041 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:30.164 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point=================== 17-02-28 20:23:30.187 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0880516616390783Best Z position at top surface = -0.159423559532561Best Z position at top surface + compensator offset = -0.136723559532561 C:3,L:4,T 17-02-28 20:23:30.188 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.159423559532561 17-02-28 20:23:30.188 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97418 17-02-28 20:23:30.188 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0880516616390783 17-02-28 20:23:30.188 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.63056 17-02-28 20:23:30.188 -08 000000042 INF: Z-height at LaneTopSurface is -0.159423559532561. 17-02-28 20:23:30.188 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-02-28 20:23:30.291 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:30.321 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-02-28 20:23:30.321 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n 17-02-28 20:23:30.351 -08 000000069 INF: FPGA: Recv ZSTEP 17-02-28 20:23:30.351 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1=================== 17-02-28 20:23:30.352 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:30.353 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:30.353 -08 000000042 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908 17-02-28 20:23:30.353 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:30.354 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:30.354 -08 000000059 INF: ===================Move Tilt Motor 1=================== 17-02-28 20:23:30.355 -08 000000101 INF: ===================Move Tilt Motor 3=================== 17-02-28 20:23:30.355 -08 000000078 INF: ===================Move Tilt Motor 2=================== 17-02-28 20:23:30.355 -08 000000078 INF: ====================================== 17-02-28 20:23:30.355 -08 000000101 INF: ====================================== 17-02-28 20:23:30.356 -08 000000059 INF: ====================================== 17-02-28 20:23:30.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:30.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:30.358 -08 000000042 INF: ETF Best Z: -0.1367236 mm (35841 DAC) 17-02-28 20:23:30.358 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:30.359 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:30.359 -08 000000042 INF: Compensator: Moving IntoPath 17-02-28 20:23:30.359 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n 17-02-28 20:23:30.602 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:30.666 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:30.790 -08 000000109 INF: FPGA: Recv MIOCOMPF 17-02-28 20:23:30.790 -08 000000042 INF: Compensator: Moved IntoPath in 431 ms 17-02-28 20:23:30.791 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:30.792 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:30.797 -08 000000042 INF: Swath 1 position calculated to be: {X=76.92664, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface 17-02-28 20:23:30.798 -08 000000042 INF: Swath 2 position calculated to be: {X=78.03464, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface 17-02-28 20:23:30.803 -08 000000042 INF: Swath 0: Converted transform from (-34.14099, 9.916637) pixels to (-0.01173, 0.00345) mm. 17-02-28 20:23:30.809 -08 000000042 INF: Swath 1: Converted transform from (-57.09752, 9.859371) pixels to (-0.019665, 0.00345) mm. 17-02-28 20:23:30.809 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308=================== 17-02-28 20:23:30.810 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308=================== 17-02-28 20:23:30.810 -08 000000042 INF: Transformed XStagePosition from 76.92664 mm to 76.9149057418108 mm. 17-02-28 20:23:30.821 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5565393554289 mm. 17-02-28 20:23:30.821 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3565393554289 mm. 17-02-28 20:23:30.821 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4472893554289 mm. 17-02-28 20:23:30.824 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:30.824 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-02-28 20:23:30.824 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:30.824 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = D_1 17-02-28 20:23:30.830 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:23:30.830 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:23:30.831 -08 000000037 INF: ===================MoveEmissionFilters=================== 17-02-28 20:23:30.831 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:23:30.831 -08 000000046 INF: ===================Move X,Y=================== 17-02-28 20:23:30.832 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:23:30.832 -08 000000108 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:23:30.832 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-02-28 20:23:30.832 -08 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:23:30.832 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:23:30.832 -08 000000046 INF: ===================Move X,Y, Parallel=================== 17-02-28 20:23:30.833 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:23:30.833 -08 000000108 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:23:30.833 -08 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:23:30.833 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:23:30.833 -08 000000023 INF: ===================Move X Motor without settling=================== 17-02-28 20:23:30.833 -08 000000066 INF: ===================Move Y Motor without settling=================== 17-02-28 20:23:30.833 -08 000000023 INF: X Motor: Xmit PR VM\n 17-02-28 20:23:30.833 -08 000000104 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-02-28 20:23:30.833 -08 000000066 INF: Y Motor: Moving to 64.5565 mm @25.000 mm/sec, started at 62.9704 mm 17-02-28 20:23:30.833 -08 000000033 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-02-28 20:23:30.834 -08 000000050 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-02-28 20:23:30.834 -08 000000082 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-02-28 20:23:30.834 -08 000000066 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:23:30.834 -08 000000035 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-02-28 20:23:30.834 -08 000000091 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-02-28 20:23:30.834 -08 000000085 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-02-28 20:23:30.834 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:30.834 -08 000000073 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-02-28 20:23:30.834 -08 000000104 INF: ====================================== 17-02-28 20:23:30.834 -08 000000085 INF: ====================================== 17-02-28 20:23:30.834 -08 000000073 INF: ====================================== 17-02-28 20:23:30.835 -08 000000033 INF: Emission Filter 12: Remaining IntoPath 17-02-28 20:23:30.835 -08 000000059 INF: Z Motor: Entering MoveAbsStepped 17-02-28 20:23:30.835 -08 000000059 INF: Z Motor: Moving to -0.1567 mm, started at -0.0100 mm 17-02-28 20:23:30.835 -08 000000082 INF: ====================================== 17-02-28 20:23:30.835 -08 000000059 INF: FPGA: Xmit ZTRG 0\n 17-02-28 20:23:30.835 -08 000000033 INF: ====================================== 17-02-28 20:23:30.836 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:23:30.837 -08 000000050 INF: ====================================== 17-02-28 20:23:30.837 -08 000000091 INF: ====================================== 17-02-28 20:23:30.837 -08 000000035 INF: ====================================== 17-02-28 20:23:30.838 -08 000000087 INF: ====================================== 17-02-28 20:23:30.838 -08 000000108 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:23:30.838 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:23:30.838 -08 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:23:30.839 -08 000000108 INF: ====================================== 17-02-28 20:23:30.839 -08 000000064 INF: ====================================== 17-02-28 20:23:30.839 -08 000000078 INF: ====================================== 17-02-28 20:23:30.840 -08 000000037 INF: ====================================== 17-02-28 20:23:30.853 -08 000000030 INF: FPGA: Recv ZTRG 17-02-28 20:23:30.853 -08 000000059 INF: FPGA: Xmit ZYT 0 3\n 17-02-28 20:23:30.915 -08 000000037 INF: FPGA: Recv ZYT 17-02-28 20:23:30.915 -08 000000059 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 17-02-28 20:23:30.915 -08 000000059 INF: FPGA: Xmit ZMV 41084\n 17-02-28 20:23:30.916 -08 000000023 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-02-28 20:23:30.916 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:30.916 -08 000000066 INF: Y Motor: Recv ok\r 17-02-28 20:23:30.916 -08 000000066 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:23:30.916 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:30.916 -08 000000023 INF: X Motor: Xmit PR VI\n 17-02-28 20:23:30.976 -08 000000062 INF: FPGA: Recv @LOG Trigger Camera 17-02-28 20:23:30.976 -08 000000006 INF: FPGA: Trigger Camera 17-02-28 20:23:30.977 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:30.978 -08 000000023 INF: X Motor: Recv PR VI\r\n410\r\n> 17-02-28 20:23:30.978 -08 000000023 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-02-28 20:23:30.978 -08 000000023 INF: X Motor: Moving to 76.9149 mm @15.000 mm/sec, started at 77.4814 mm 17-02-28 20:23:30.978 -08 000000023 INF: X Motor: Xmit MA 7338\n 17-02-28 20:23:30.979 -08 000000066 INF: Y Motor: Recv ok\r 17-02-28 20:23:30.979 -08 000000066 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:31.040 -08 000000023 INF: X Motor: Recv MA 7338\r\n> 17-02-28 20:23:31.040 -08 000000066 INF: Y Motor: Recv v 0\r 17-02-28 20:23:31.040 -08 000000066 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:31.040 -08 000000023 INF: X Motor: WaitUntilStopped 60038 17-02-28 20:23:31.040 -08 000000066 INF: Y Motor: Set target position to 5955654 encoder counts 17-02-28 20:23:31.040 -08 000000066 INF: Y Motor: Xmit s r0xca 5955654\r 17-02-28 20:23:31.100 -08 000000064 INF: FPGA: Recv ZMV 17-02-28 20:23:31.100 -08 000000059 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.1136 ms 17-02-28 20:23:31.100 -08 000000059 INF: FPGA: Xmit ZDACR\n 17-02-28 20:23:31.102 -08 000000066 INF: Y Motor: Recv ok\r 17-02-28 20:23:31.102 -08 000000066 INF: Y Motor: Start the move command 17-02-28 20:23:31.102 -08 000000066 INF: Y Motor: Xmit t 1\r 17-02-28 20:23:31.162 -08 000000104 INF: FPGA: Recv ZDACR 41084 17-02-28 20:23:31.162 -08 000000059 INF: Z Motor: MoveAndTrigger took 327.1223 ms w/comms 17-02-28 20:23:31.162 -08 000000059 INF: Z Motor: After move to -0.1567, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 17-02-28 20:23:31.162 -08 000000059 INF: Z Motor: MoveAbsStepped took 327.35 ms 17-02-28 20:23:31.163 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:23:31.164 -08 000000066 INF: Y Motor: Recv ok\r 17-02-28 20:23:31.164 -08 000000066 INF: Y Motor: WaitUntilStopped 60063 17-02-28 20:23:31.164 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:31.164 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-02-28 20:23:31.165 -08 000000109 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:31.165 -08 000000101 INF: ===================Camera Arm TDI=================== 17-02-28 20:23:31.166 -08 000000109 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:31.166 -08 000000101 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:23:31.166 -08 000000109 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:23:31.166 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:23:31.167 -08 000000109 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:23:31.167 -08 000000109 INF: FPGA: Xmit ZSEL 3\n 17-02-28 20:23:31.226 -08 000000077 INF: FPGA: Recv ZSEL 17-02-28 20:23:31.227 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:31.227 -08 000000109 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:23:31.227 -08 000000109 INF: FPGA: Xmit TDIBB 1\n 17-02-28 20:23:31.287 -08 000000045 INF: FPGA: Recv TDIBB 17-02-28 20:23:31.287 -08 000000109 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:23:31.288 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:31.288 -08 000000109 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:23:31.289 -08 000000109 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:31.290 -08 000000066 INF: Y Motor: Unshifted Position: 5881016 17-02-28 20:23:31.290 -08 000000109 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-02-28 20:23:31.291 -08 000000109 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-02-28 20:23:31.291 -08 000000109 INF: FPGA: Xmit ZSTEP 1792263\n 17-02-28 20:23:31.340 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:31.349 -08 000000051 INF: FPGA: Recv ZSTEP 17-02-28 20:23:31.349 -08 000000109 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:31.351 -08 000000109 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-02-28 20:23:31.351 -08 000000109 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:31.353 -08 000000109 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-02-28 20:23:31.353 -08 000000109 INF: Z Motor: Entering ArmAbsStepped 17-02-28 20:23:31.353 -08 000000109 INF: Z Motor: Arming to move to -0.1167 mm 17-02-28 20:23:31.353 -08 000000109 INF: FPGA: Xmit ZYT 6435654 4\n 17-02-28 20:23:31.413 -08 000000050 INF: FPGA: Recv ZYT 17-02-28 20:23:31.413 -08 000000109 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6381016 enc / 63.810 mm / ) = 6435654 enc / 64.357 mm 17-02-28 20:23:31.413 -08 000000109 INF: FPGA: Xmit ZARM 30598\n 17-02-28 20:23:31.465 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:31.475 -08 000000045 INF: FPGA: Recv ZARM 17-02-28 20:23:31.475 -08 000000109 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0233 ms 17-02-28 20:23:31.475 -08 000000109 INF: Z Motor: ArmAbsStepped took 121.9907 ms 17-02-28 20:23:31.475 -08 000000109 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:31.477 -08 000000109 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:31.477 -08 000000023 INF: X Motor: Xmit PR ER\n 17-02-28 20:23:31.478 -08 000000109 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-02-28 20:23:31.478 -08 000000109 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:31.480 -08 000000109 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-02-28 20:23:31.480 -08 000000109 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:31.481 -08 000000109 INF: ====================================== 17-02-28 20:23:31.538 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:31.539 -08 000000023 INF: X Motor: Recv PR ER\r\n0\r\n> 17-02-28 20:23:31.539 -08 000000023 INF: X Motor: Moved to 76.9150 after 499 ms 17-02-28 20:23:31.539 -08 000000023 INF: ====================================== 17-02-28 20:23:31.600 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:31.601 -08 000000066 INF: Y Motor: Unshifted Position: 5955655 17-02-28 20:23:31.601 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:23:31.601 -08 000000066 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:31.663 -08 000000066 INF: Y Motor: Recv v 0\r 17-02-28 20:23:31.663 -08 000000066 INF: Y Motor: Moved to 64.5566 after 499 ms 17-02-28 20:23:31.663 -08 000000066 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:23:31.728 -08 000000066 INF: Y Motor: Recv v 4096\r 17-02-28 20:23:31.728 -08 000000066 INF: Y Motor: Status After move finished OK: 17-02-28 20:23:31.728 -08 000000066 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:31.790 -08 000000066 INF: Y Motor: Recv v 0\r 17-02-28 20:23:31.790 -08 000000066 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:31.790 -08 000000066 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:23:31.850 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:31.853 -08 000000066 INF: Y Motor: Recv v 402653184\r 17-02-28 20:23:31.853 -08 000000066 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-02-28 20:23:31.853 -08 000000066 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:23:31.853 -08 000000066 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:23:31.914 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:31.915 -08 000000066 INF: Y Motor: Recv v 0\r 17-02-28 20:23:31.915 -08 000000066 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:23:31.915 -08 000000066 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:23:31.915 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:31.977 -08 000000066 INF: Y Motor: Recv ok\r 17-02-28 20:23:31.977 -08 000000066 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:23:31.977 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:32.040 -08 000000066 INF: Y Motor: Recv ok\r 17-02-28 20:23:32.040 -08 000000066 INF: ====================================== 17-02-28 20:23:32.041 -08 000000046 INF: ===================Move X,Y=================== 17-02-28 20:23:32.042 -08 000000046 INF: ====================================== 17-02-28 20:23:32.150 -08 000000101 INF: Camera #0 AttachBuffer (imageDataPtr = 56918282288 imgPtr = 56918282288 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:23:32.150 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:23:32.151 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:23:32.164 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:32.166 -08 000000101 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:23:32.168 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:23:32.224 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:32.474 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:32.536 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:32.786 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:32.851 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:33.101 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:33.161 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:33.411 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:33.473 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:33.546 -08 000000101 INF: Camera #2 AttachBuffer (imageDataPtr = 58730221616 imgPtr = 59636191280 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:23:33.546 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:23:33.546 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:23:33.561 -08 000000101 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:23:33.563 -08 000000101 INF: ===================Camera Arm TDI=================== 17-02-28 20:23:33.564 -08 000000101 INF: ====================================== 17-02-28 20:23:33.565 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:23:33.566 -08 000000059 INF: ====================================== 17-02-28 20:23:33.567 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:23:33.568 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:33.568 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-02-28 20:23:33.568 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-02-28 20:23:33.600 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:23:33.600 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-02-28 20:23:33.660 -08 000000046 INF: FPGA: Recv ZFREQCL 17-02-28 20:23:33.660 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-02-28 20:23:33.660 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:33.661 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:23:33.722 -08 000000037 INF: FPGA: Recv TDIYERD 6455656 17-02-28 20:23:33.722 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455656 counts (64.557 mm) 17-02-28 20:23:33.722 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:23:33.723 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:33.723 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:23:33.723 -08 000000039 INF: ===================TDI FPGA Arm=================== 17-02-28 20:23:33.724 -08 000000104 INF: ===================Set YMotor gains for scans=================== 17-02-28 20:23:33.724 -08 000000104 INF: ====================================== 17-02-28 20:23:33.724 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:23:33.725 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-02-28 20:23:33.725 -08 000000039 INF: FPGA: Xmit TDIYPOS 6344729\n 17-02-28 20:23:33.784 -08 000000077 INF: FPGA: Recv TDIYPOS 17-02-28 20:23:33.784 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:23:33.785 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:33.786 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-02-28 20:23:33.786 -08 000000039 INF: FPGA: Xmit TDIYARM3 139264 6435654 1 1\n 17-02-28 20:23:33.846 -08 000000066 INF: FPGA: Recv TDIYARM3 17-02-28 20:23:33.846 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:23:33.847 -08 000000039 INF: ===================TDI FPGA Arm=================== 17-02-28 20:23:33.848 -08 000000039 INF: ====================================== 17-02-28 20:23:33.849 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:23:33.850 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:33.850 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:33.850 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:33.851 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:33.852 -08 000000046 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-02-28 20:23:33.852 -08 000000035 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-02-28 20:23:33.852 -08 000000046 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-02-28 20:23:33.852 -08 000000046 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-02-28 20:23:33.852 -08 000000046 INF: Excitation Filter 2: Moving -107 steps 17-02-28 20:23:33.852 -08 000000035 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-02-28 20:23:33.852 -08 000000046 INF: FPGA: Xmit EX2MV -107\n 17-02-28 20:23:33.852 -08 000000035 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-02-28 20:23:33.852 -08 000000035 INF: Excitation Filter 1: Moving -107 steps 17-02-28 20:23:33.853 -08 000000035 INF: FPGA: Xmit EX1MV -107\n 17-02-28 20:23:34.035 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:34.097 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:34.222 -08 000000105 INF: FPGA: Recv EX2MV 17-02-28 20:23:34.222 -08 000000105 INF: FPGA: Recv EX1MV 17-02-28 20:23:34.222 -08 000000035 INF: Excitation Filter 1: Moved -107 steps in 369.897 ms 17-02-28 20:23:34.222 -08 000000035 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 370.0313 ms 17-02-28 20:23:34.222 -08 000000046 INF: Excitation Filter 2: Moved -107 steps in 370.0982 ms 17-02-28 20:23:34.222 -08 000000046 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 370.2301 ms 17-02-28 20:23:34.222 -08 000000046 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 370.3023 ms 17-02-28 20:23:34.222 -08 000000035 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 370.1047 ms 17-02-28 20:23:34.222 -08 000000046 INF: ====================================== 17-02-28 20:23:34.223 -08 000000035 INF: ====================================== 17-02-28 20:23:34.224 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:34.225 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:34.226 -08 000000101 INF: ===================Camera TDI=================== 17-02-28 20:23:34.226 -08 000000083 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:23:34.226 -08 000000095 INF: ===================FPGA Z Wait=================== 17-02-28 20:23:34.226 -08 000000098 INF: ===================Move Y Motor without settling=================== 17-02-28 20:23:34.226 -08 000000095 INF: FPGA: Xmit ZWAIT\n 17-02-28 20:23:34.226 -08 000000098 INF: Y Motor: Moving to 14.9082 mm @6.500 mm/sec, started at 64.5566 mm 17-02-28 20:23:34.226 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:23:34.226 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:34.226 -08 000000101 INF: ===================Camera TDI, Parallel=================== 17-02-28 20:23:34.226 -08 000000083 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-02-28 20:23:34.227 -08 000000083 INF: FPGA: Xmit TDIYWAIT\n 17-02-28 20:23:34.227 -08 000000023 INF: ===================Camera TDI=================== 17-02-28 20:23:34.227 -08 000000078 INF: ===================Camera TDI=================== 17-02-28 20:23:34.228 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:34.228 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:34.229 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:34.229 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:34.285 -08 000000098 INF: Y Motor: Recv ok\r 17-02-28 20:23:34.285 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:23:34.285 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:34.347 -08 000000098 INF: Y Motor: Recv ok\r 17-02-28 20:23:34.347 -08 000000098 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:34.347 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:34.379 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:34.379 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:34.379 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:34.379 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:34.408 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:34.409 -08 000000098 INF: Y Motor: Recv v 0\r 17-02-28 20:23:34.409 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:34.409 -08 000000098 INF: Y Motor: Set target position to 990820 encoder counts 17-02-28 20:23:34.409 -08 000000098 INF: Y Motor: Xmit s r0xca 990820\r 17-02-28 20:23:34.473 -08 000000098 INF: Y Motor: Recv ok\r 17-02-28 20:23:34.473 -08 000000098 INF: Y Motor: Start the move command 17-02-28 20:23:34.473 -08 000000098 INF: Y Motor: Xmit t 1\r 17-02-28 20:23:34.529 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:34.529 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:34.529 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:34.529 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:34.535 -08 000000098 INF: Y Motor: Recv ok\r 17-02-28 20:23:34.535 -08 000000098 INF: Y Motor: WaitUntilStopped 67638 17-02-28 20:23:34.535 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:34.596 -08 000000064 INF: FPGA: Recv ZWAIT 17-02-28 20:23:34.596 -08 000000095 INF: ====================================== 17-02-28 20:23:34.658 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:34.662 -08 000000098 INF: Y Motor: Unshifted Position: 5893153 17-02-28 20:23:34.679 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:23:34.679 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:23:34.679 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:23:34.679 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:23:34.679 -08 000000078 INF: ===================Camera #2 Frame #5=================== 17-02-28 20:23:34.679 -08 000000023 INF: ===================Camera #0 Frame #5=================== 17-02-28 20:23:34.712 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:34.724 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:34.835 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:34.844 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-02-28 20:23:34.844 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-02-28 20:23:34.844 -08 000000023 INF: ===================Camera #0 Frame #11=================== 17-02-28 20:23:34.845 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-02-28 20:23:34.845 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-02-28 20:23:34.845 -08 000000078 INF: ===================Camera #2 Frame #11=================== 17-02-28 20:23:34.970 -08 000000098 INF: Y Motor: Unshifted Position: 5690356 17-02-28 20:23:34.974 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:35.012 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-02-28 20:23:35.012 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-02-28 20:23:35.012 -08 000000023 INF: ===================Camera #0 Frame #17=================== 17-02-28 20:23:35.014 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17. 17-02-28 20:23:35.014 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17 17-02-28 20:23:35.014 -08 000000078 INF: ===================Camera #2 Frame #17=================== 17-02-28 20:23:35.020 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:35.034 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:35.146 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:35.180 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-02-28 20:23:35.180 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-02-28 20:23:35.180 -08 000000023 INF: ===================Camera #0 Frame #23=================== 17-02-28 20:23:35.183 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23. 17-02-28 20:23:35.183 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23 17-02-28 20:23:35.183 -08 000000078 INF: ===================Camera #2 Frame #23=================== 17-02-28 20:23:35.284 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:35.284 -08 000000098 INF: Y Motor: Unshifted Position: 5486042 17-02-28 20:23:35.334 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:35.346 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:35.346 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-02-28 20:23:35.346 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-02-28 20:23:35.346 -08 000000018 INF: WaitCommand(5000) start 17-02-28 20:23:35.347 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left=================== 17-02-28 20:23:35.348 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-02-28 20:23:35.348 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-02-28 20:23:35.348 -08 000000023 INF: ===================Camera #0 Frame #29=================== 17-02-28 20:23:35.352 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29. 17-02-28 20:23:35.352 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29 17-02-28 20:23:35.352 -08 000000078 INF: ===================Camera #2 Frame #29=================== 17-02-28 20:23:35.458 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:35.516 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35. 17-02-28 20:23:35.516 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35 17-02-28 20:23:35.516 -08 000000023 INF: ===================Camera #0 Frame #35=================== 17-02-28 20:23:35.521 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36. 17-02-28 20:23:35.521 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36 17-02-28 20:23:35.521 -08 000000078 INF: ===================Camera #2 Frame #36=================== 17-02-28 20:23:35.594 -08 000000098 INF: Y Motor: Unshifted Position: 5285836 17-02-28 20:23:35.644 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:35.684 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-02-28 20:23:35.684 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-02-28 20:23:35.684 -08 000000023 INF: ===================Camera #0 Frame #42=================== 17-02-28 20:23:35.694 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42. 17-02-28 20:23:35.694 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42 17-02-28 20:23:35.694 -08 000000078 INF: ===================Camera #2 Frame #42=================== 17-02-28 20:23:35.771 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:35.856 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-02-28 20:23:35.856 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-02-28 20:23:35.856 -08 000000023 INF: ===================Camera #0 Frame #48=================== 17-02-28 20:23:35.864 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48. 17-02-28 20:23:35.864 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48 17-02-28 20:23:35.864 -08 000000078 INF: ===================Camera #2 Frame #48=================== 17-02-28 20:23:35.907 -08 000000098 INF: Y Motor: Unshifted Position: 5082166 17-02-28 20:23:35.957 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:36.025 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54. 17-02-28 20:23:36.025 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54 17-02-28 20:23:36.025 -08 000000023 INF: ===================Camera #0 Frame #54=================== 17-02-28 20:23:36.034 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54. 17-02-28 20:23:36.034 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54 17-02-28 20:23:36.034 -08 000000078 INF: ===================Camera #2 Frame #54=================== 17-02-28 20:23:36.081 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:36.194 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60. 17-02-28 20:23:36.194 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60 17-02-28 20:23:36.194 -08 000000023 INF: ===================Camera #0 Frame #60=================== 17-02-28 20:23:36.204 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61. 17-02-28 20:23:36.204 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61 17-02-28 20:23:36.204 -08 000000078 INF: ===================Camera #2 Frame #61=================== 17-02-28 20:23:36.220 -08 000000098 INF: Y Motor: Unshifted Position: 4878716 17-02-28 20:23:36.270 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:36.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-02-28 20:23:36.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 4 of 5 seconds left=================== 17-02-28 20:23:36.364 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-02-28 20:23:36.364 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-02-28 20:23:36.364 -08 000000023 INF: ===================Camera #0 Frame #67=================== 17-02-28 20:23:36.378 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67. 17-02-28 20:23:36.379 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67 17-02-28 20:23:36.379 -08 000000078 INF: ===================Camera #2 Frame #67=================== 17-02-28 20:23:36.395 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:36.531 -08 000000098 INF: Y Motor: Unshifted Position: 4676999 17-02-28 20:23:36.536 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-02-28 20:23:36.536 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-02-28 20:23:36.536 -08 000000023 INF: ===================Camera #0 Frame #73=================== 17-02-28 20:23:36.548 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73. 17-02-28 20:23:36.548 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73 17-02-28 20:23:36.548 -08 000000078 INF: ===================Camera #2 Frame #73=================== 17-02-28 20:23:36.581 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:36.705 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79. 17-02-28 20:23:36.705 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79 17-02-28 20:23:36.705 -08 000000023 INF: ===================Camera #0 Frame #79=================== 17-02-28 20:23:36.708 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:36.717 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80. 17-02-28 20:23:36.717 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80 17-02-28 20:23:36.717 -08 000000078 INF: ===================Camera #2 Frame #80=================== 17-02-28 20:23:36.844 -08 000000098 INF: Y Motor: Unshifted Position: 4473541 17-02-28 20:23:36.874 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85. 17-02-28 20:23:36.874 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85 17-02-28 20:23:36.874 -08 000000023 INF: ===================Camera #0 Frame #85=================== 17-02-28 20:23:36.891 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86. 17-02-28 20:23:36.891 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86 17-02-28 20:23:36.891 -08 000000078 INF: ===================Camera #2 Frame #86=================== 17-02-28 20:23:36.894 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:37.020 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:37.043 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-02-28 20:23:37.043 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-02-28 20:23:37.043 -08 000000023 INF: ===================Camera #0 Frame #92=================== 17-02-28 20:23:37.061 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92. 17-02-28 20:23:37.061 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92 17-02-28 20:23:37.061 -08 000000078 INF: ===================Camera #2 Frame #92=================== 17-02-28 20:23:37.158 -08 000000098 INF: Y Motor: Unshifted Position: 4269230 17-02-28 20:23:37.208 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:37.216 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98. 17-02-28 20:23:37.216 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98 17-02-28 20:23:37.216 -08 000000023 INF: ===================Camera #0 Frame #98=================== 17-02-28 20:23:37.231 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98. 17-02-28 20:23:37.231 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98 17-02-28 20:23:37.231 -08 000000078 INF: ===================Camera #2 Frame #98=================== 17-02-28 20:23:37.333 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:37.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-02-28 20:23:37.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left=================== 17-02-28 20:23:37.386 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104. 17-02-28 20:23:37.386 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104 17-02-28 20:23:37.386 -08 000000023 INF: ===================Camera #0 Frame #104=================== 17-02-28 20:23:37.401 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105. 17-02-28 20:23:37.401 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105 17-02-28 20:23:37.401 -08 000000078 INF: ===================Camera #2 Frame #105=================== 17-02-28 20:23:37.468 -08 000000098 INF: Y Motor: Unshifted Position: 4067500 17-02-28 20:23:37.518 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:37.555 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110. 17-02-28 20:23:37.555 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110 17-02-28 20:23:37.555 -08 000000023 INF: ===================Camera #0 Frame #110=================== 17-02-28 20:23:37.575 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111. 17-02-28 20:23:37.575 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111 17-02-28 20:23:37.575 -08 000000078 INF: ===================Camera #2 Frame #111=================== 17-02-28 20:23:37.642 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:37.725 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-02-28 20:23:37.725 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-02-28 20:23:37.725 -08 000000023 INF: ===================Camera #0 Frame #117=================== 17-02-28 20:23:37.746 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117. 17-02-28 20:23:37.746 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117 17-02-28 20:23:37.746 -08 000000078 INF: ===================Camera #2 Frame #117=================== 17-02-28 20:23:37.779 -08 000000098 INF: Y Motor: Unshifted Position: 3863405 17-02-28 20:23:37.829 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:37.898 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123. 17-02-28 20:23:37.898 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123 17-02-28 20:23:37.898 -08 000000023 INF: ===================Camera #0 Frame #123=================== 17-02-28 20:23:37.917 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124. 17-02-28 20:23:37.917 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124 17-02-28 20:23:37.917 -08 000000078 INF: ===================Camera #2 Frame #124=================== 17-02-28 20:23:37.956 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:38.067 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129. 17-02-28 20:23:38.067 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129 17-02-28 20:23:38.067 -08 000000023 INF: ===================Camera #0 Frame #129=================== 17-02-28 20:23:38.091 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130. 17-02-28 20:23:38.091 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130 17-02-28 20:23:38.091 -08 000000078 INF: ===================Camera #2 Frame #130=================== 17-02-28 20:23:38.092 -08 000000098 INF: Y Motor: Unshifted Position: 3661900 17-02-28 20:23:38.142 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:38.237 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-02-28 20:23:38.237 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-02-28 20:23:38.237 -08 000000023 INF: ===================Camera #0 Frame #136=================== 17-02-28 20:23:38.261 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136. 17-02-28 20:23:38.261 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136 17-02-28 20:23:38.261 -08 000000078 INF: ===================Camera #2 Frame #136=================== 17-02-28 20:23:38.266 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:38.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-02-28 20:23:38.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 2 of 5 seconds left=================== 17-02-28 20:23:38.406 -08 000000098 INF: Y Motor: Unshifted Position: 3457590 17-02-28 20:23:38.410 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142. 17-02-28 20:23:38.410 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142 17-02-28 20:23:38.410 -08 000000023 INF: ===================Camera #0 Frame #142=================== 17-02-28 20:23:38.432 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143. 17-02-28 20:23:38.432 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143 17-02-28 20:23:38.432 -08 000000078 INF: ===================Camera #2 Frame #143=================== 17-02-28 20:23:38.456 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:38.578 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:38.580 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148. 17-02-28 20:23:38.580 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148 17-02-28 20:23:38.580 -08 000000023 INF: ===================Camera #0 Frame #148=================== 17-02-28 20:23:38.606 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149. 17-02-28 20:23:38.606 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149 17-02-28 20:23:38.606 -08 000000078 INF: ===================Camera #2 Frame #149=================== 17-02-28 20:23:38.715 -08 000000098 INF: Y Motor: Unshifted Position: 3254573 17-02-28 20:23:38.750 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154. 17-02-28 20:23:38.750 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154 17-02-28 20:23:38.750 -08 000000023 INF: ===================Camera #0 Frame #154=================== 17-02-28 20:23:38.765 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:38.777 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155. 17-02-28 20:23:38.777 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155 17-02-28 20:23:38.777 -08 000000078 INF: ===================Camera #2 Frame #155=================== 17-02-28 20:23:38.892 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:38.920 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161. 17-02-28 20:23:38.920 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161 17-02-28 20:23:38.920 -08 000000023 INF: ===================Camera #0 Frame #161=================== 17-02-28 20:23:38.948 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162. 17-02-28 20:23:38.948 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162 17-02-28 20:23:38.948 -08 000000078 INF: ===================Camera #2 Frame #162=================== 17-02-28 20:23:39.028 -08 000000098 INF: Y Motor: Unshifted Position: 3053076 17-02-28 20:23:39.078 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:39.093 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167. 17-02-28 20:23:39.093 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167 17-02-28 20:23:39.093 -08 000000023 INF: ===================Camera #0 Frame #167=================== 17-02-28 20:23:39.122 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168. 17-02-28 20:23:39.122 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168 17-02-28 20:23:39.122 -08 000000078 INF: ===================Camera #2 Frame #168=================== 17-02-28 20:23:39.202 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:39.263 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173. 17-02-28 20:23:39.263 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173 17-02-28 20:23:39.263 -08 000000023 INF: ===================Camera #0 Frame #173=================== 17-02-28 20:23:39.293 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174. 17-02-28 20:23:39.293 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174 17-02-28 20:23:39.293 -08 000000078 INF: ===================Camera #2 Frame #174=================== 17-02-28 20:23:39.339 -08 000000098 INF: Y Motor: Unshifted Position: 2848764 17-02-28 20:23:39.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-02-28 20:23:39.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 1 of 5 seconds left=================== 17-02-28 20:23:39.389 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:39.433 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180. 17-02-28 20:23:39.433 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180 17-02-28 20:23:39.433 -08 000000023 INF: ===================Camera #0 Frame #180=================== 17-02-28 20:23:39.465 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181. 17-02-28 20:23:39.465 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181 17-02-28 20:23:39.465 -08 000000078 INF: ===================Camera #2 Frame #181=================== 17-02-28 20:23:39.514 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:39.606 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186. 17-02-28 20:23:39.606 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186 17-02-28 20:23:39.606 -08 000000023 INF: ===================Camera #0 Frame #186=================== 17-02-28 20:23:39.639 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-02-28 20:23:39.639 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-02-28 20:23:39.639 -08 000000078 INF: ===================Camera #2 Frame #187=================== 17-02-28 20:23:39.651 -08 000000098 INF: Y Motor: Unshifted Position: 2645964 17-02-28 20:23:39.701 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:39.776 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192. 17-02-28 20:23:39.776 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192 17-02-28 20:23:39.776 -08 000000023 INF: ===================Camera #0 Frame #192=================== 17-02-28 20:23:39.809 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193. 17-02-28 20:23:39.809 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193 17-02-28 20:23:39.809 -08 000000078 INF: ===================Camera #2 Frame #193=================== 17-02-28 20:23:39.828 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:39.946 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198. 17-02-28 20:23:39.946 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198 17-02-28 20:23:39.946 -08 000000023 INF: ===================Camera #0 Frame #198=================== 17-02-28 20:23:39.966 -08 000000098 INF: Y Motor: Unshifted Position: 2444260 17-02-28 20:23:39.980 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200. 17-02-28 20:23:39.980 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200 17-02-28 20:23:39.980 -08 000000078 INF: ===================Camera #2 Frame #200=================== 17-02-28 20:23:40.016 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:40.115 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205. 17-02-28 20:23:40.115 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205 17-02-28 20:23:40.115 -08 000000023 INF: ===================Camera #0 Frame #205=================== 17-02-28 20:23:40.138 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:40.154 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-02-28 20:23:40.154 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-02-28 20:23:40.154 -08 000000078 INF: ===================Camera #2 Frame #206=================== 17-02-28 20:23:40.275 -08 000000098 INF: Y Motor: Unshifted Position: 2240156 17-02-28 20:23:40.288 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211. 17-02-28 20:23:40.288 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211 17-02-28 20:23:40.288 -08 000000023 INF: ===================Camera #0 Frame #211=================== 17-02-28 20:23:40.325 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:40.325 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212. 17-02-28 20:23:40.325 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212 17-02-28 20:23:40.325 -08 000000078 INF: ===================Camera #2 Frame #212=================== 17-02-28 20:23:40.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-02-28 20:23:40.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-02-28 20:23:40.348 -08 000000018 INF: WaitCommand(5000) end 17-02-28 20:23:40.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-02-28 20:23:40.447 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:23:40.452 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:40.457 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217. 17-02-28 20:23:40.457 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217 17-02-28 20:23:40.457 -08 000000023 INF: ===================Camera #0 Frame #217=================== 17-02-28 20:23:40.496 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219. 17-02-28 20:23:40.496 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219 17-02-28 20:23:40.496 -08 000000078 INF: ===================Camera #2 Frame #219=================== 17-02-28 20:23:40.527 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF) 17-02-28 20:23:40.527 -08 000000018 INF: Current Position of Pump is: 9600 17-02-28 20:23:40.587 -08 000000098 INF: Y Motor: Unshifted Position: 2037137 17-02-28 20:23:40.626 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223. 17-02-28 20:23:40.626 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223 17-02-28 20:23:40.626 -08 000000023 INF: ===================Camera #0 Frame #223=================== 17-02-28 20:23:40.627 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 17-02-28 20:23:40.637 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:40.670 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225. 17-02-28 20:23:40.670 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225 17-02-28 20:23:40.670 -08 000000078 INF: ===================Camera #2 Frame #225=================== 17-02-28 20:23:40.713 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF) 17-02-28 20:23:40.713 -08 000000018 INF: Current Position of Pump is: 9600 17-02-28 20:23:40.713 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC=================== 17-02-28 20:23:40.764 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:40.796 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230. 17-02-28 20:23:40.796 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230 17-02-28 20:23:40.796 -08 000000023 INF: ===================Camera #0 Frame #230=================== 17-02-28 20:23:40.813 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD9600R\r 17-02-28 20:23:40.840 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231. 17-02-28 20:23:40.840 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231 17-02-28 20:23:40.840 -08 000000078 INF: ===================Camera #2 Frame #231=================== 17-02-28 20:23:40.899 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:40.900 -08 000000098 INF: Y Motor: Unshifted Position: 1835635 17-02-28 20:23:40.950 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:40.969 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236. 17-02-28 20:23:40.969 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236 17-02-28 20:23:40.969 -08 000000023 INF: ===================Camera #0 Frame #236=================== 17-02-28 20:23:40.999 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:41.011 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238. 17-02-28 20:23:41.011 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238 17-02-28 20:23:41.011 -08 000000078 INF: ===================Camera #2 Frame #238=================== 17-02-28 20:23:41.074 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:41.085 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:41.139 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242. 17-02-28 20:23:41.139 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242 17-02-28 20:23:41.139 -08 000000023 INF: ===================Camera #0 Frame #242=================== 17-02-28 20:23:41.185 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244. 17-02-28 20:23:41.185 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244 17-02-28 20:23:41.185 -08 000000078 INF: ===================Camera #2 Frame #244=================== 17-02-28 20:23:41.211 -08 000000098 INF: Y Motor: Unshifted Position: 1631528 17-02-28 20:23:41.261 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:41.309 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249. 17-02-28 20:23:41.309 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249 17-02-28 20:23:41.309 -08 000000023 INF: ===================Camera #0 Frame #249=================== 17-02-28 20:23:41.335 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:41.356 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250. 17-02-28 20:23:41.356 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250 17-02-28 20:23:41.356 -08 000000078 INF: ===================Camera #2 Frame #250=================== 17-02-28 20:23:41.388 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:41.399 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:41.482 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255. 17-02-28 20:23:41.482 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255 17-02-28 20:23:41.482 -08 000000023 INF: ===================Camera #0 Frame #255=================== 17-02-28 20:23:41.523 -08 000000098 INF: Y Motor: Unshifted Position: 1428514 17-02-28 20:23:41.527 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257. 17-02-28 20:23:41.527 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257 17-02-28 20:23:41.527 -08 000000078 INF: ===================Camera #2 Frame #257=================== 17-02-28 20:23:41.573 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:41.649 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:41.652 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261. 17-02-28 20:23:41.652 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261 17-02-28 20:23:41.652 -08 000000023 INF: ===================Camera #0 Frame #261=================== 17-02-28 20:23:41.700 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:41.701 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263. 17-02-28 20:23:41.701 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263 17-02-28 20:23:41.701 -08 000000078 INF: ===================Camera #2 Frame #263=================== 17-02-28 20:23:41.711 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:41.822 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268. 17-02-28 20:23:41.822 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268 17-02-28 20:23:41.822 -08 000000023 INF: ===================Camera #0 Frame #268=================== 17-02-28 20:23:41.838 -08 000000098 INF: Y Motor: Unshifted Position: 1226780 17-02-28 20:23:41.872 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269. 17-02-28 20:23:41.872 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269 17-02-28 20:23:41.872 -08 000000078 INF: ===================Camera #2 Frame #269=================== 17-02-28 20:23:41.888 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:41.958 -08 000000051 INF: FPGA: Recv TDIYWAIT 17-02-28 20:23:41.958 -08 000000083 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:23:41.960 -08 000000083 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-02-28 20:23:41.961 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:41.961 -08 000000091 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-02-28 20:23:41.961 -08 000000064 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-02-28 20:23:41.961 -08 000000091 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-02-28 20:23:41.961 -08 000000091 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-02-28 20:23:41.961 -08 000000091 INF: Excitation Filter 1: Moving 107 steps 17-02-28 20:23:41.961 -08 000000064 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 17-02-28 20:23:41.961 -08 000000064 INF: Excitation Filter 2: Moving to 0.0000 degrees 17-02-28 20:23:41.961 -08 000000064 INF: Excitation Filter 2: Moving 107 steps 17-02-28 20:23:41.961 -08 000000091 INF: FPGA: Xmit EX1MV 107\n 17-02-28 20:23:41.962 -08 000000064 INF: FPGA: Xmit EX2MV 107\n 17-02-28 20:23:41.995 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:23:41.995 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:23:41.995 -08 000000023 INF: ===================Camera #0 Frame #272=================== 17-02-28 20:23:42.008 -08 000000023 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:23:42.009 -08 000000023 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:23:42.010 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:42.021 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:42.147 -08 000000098 INF: Y Motor: Unshifted Position: 1022693 17-02-28 20:23:42.173 -08 000000023 INF: Camera #0 ReleaseBuffer 17-02-28 20:23:42.173 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:23:42.173 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:23:42.173 -08 000000078 INF: ===================Camera #2 Frame #272=================== 17-02-28 20:23:42.173 -08 000000023 INF: ===================Camera TDI=================== 17-02-28 20:23:42.182 -08 000000078 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:23:42.183 -08 000000078 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:23:42.197 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:42.214 -08 000000023 INF: ====================================== 17-02-28 20:23:42.271 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:42.335 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:42.335 -08 000000105 INF: FPGA: Recv EX1MV 17-02-28 20:23:42.335 -08 000000105 INF: FPGA: Recv EX2MV 17-02-28 20:23:42.335 -08 000000064 INF: Excitation Filter 2: Moved 107 steps in 373.6706 ms 17-02-28 20:23:42.335 -08 000000064 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.7717 ms 17-02-28 20:23:42.335 -08 000000091 INF: Excitation Filter 1: Moved 107 steps in 373.8409 ms 17-02-28 20:23:42.335 -08 000000091 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.9694 ms 17-02-28 20:23:42.335 -08 000000091 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 374.0348 ms 17-02-28 20:23:42.335 -08 000000064 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.8466 ms 17-02-28 20:23:42.335 -08 000000091 INF: ====================================== 17-02-28 20:23:42.335 -08 000000064 INF: ====================================== 17-02-28 20:23:42.336 -08 000000098 INF: Y Motor: Unshifted Position: 990820 17-02-28 20:23:42.336 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:23:42.336 -08 000000098 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:42.336 -08 000000083 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:23:42.337 -08 000000083 INF: ====================================== 17-02-28 20:23:42.375 -08 000000078 INF: Camera #2 ReleaseBuffer 17-02-28 20:23:42.375 -08 000000078 INF: ===================Camera TDI=================== 17-02-28 20:23:42.398 -08 000000098 INF: Y Motor: Recv v 0\r 17-02-28 20:23:42.398 -08 000000098 INF: Y Motor: Moved to 14.9082 after 7862 ms 17-02-28 20:23:42.398 -08 000000098 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:23:42.409 -08 000000078 INF: ====================================== 17-02-28 20:23:42.410 -08 000000101 INF: ===================Camera TDI=================== 17-02-28 20:23:42.411 -08 000000101 INF: ====================================== 17-02-28 20:23:42.461 -08 000000098 INF: Y Motor: Recv v 4097\r 17-02-28 20:23:42.461 -08 000000098 INF: Y Motor: Status After move finished OK: 17-02-28 20:23:42.461 -08 000000098 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:42.523 -08 000000098 INF: Y Motor: Recv v 0\r 17-02-28 20:23:42.523 -08 000000098 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:42.523 -08 000000098 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:23:42.585 -08 000000098 INF: Y Motor: Recv v 134217728\r 17-02-28 20:23:42.585 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:42.585 -08 000000098 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled. 17-02-28 20:23:42.585 -08 000000098 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:23:42.585 -08 000000098 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:23:42.646 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:42.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-02-28 20:23:42.646 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-02-28 20:23:42.647 -08 000000098 INF: Y Motor: Recv v 0\r 17-02-28 20:23:42.647 -08 000000098 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:23:42.647 -08 000000098 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:23:42.647 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:42.709 -08 000000098 INF: Y Motor: Recv ok\r 17-02-28 20:23:42.709 -08 000000098 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:23:42.709 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:42.771 -08 000000098 INF: Y Motor: Recv ok\r 17-02-28 20:23:42.771 -08 000000098 INF: ====================================== 17-02-28 20:23:42.772 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:42.773 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:42.774 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:42.774 -08 000000042 INF: FPGA: Xmit TDICLINES\n 17-02-28 20:23:42.831 -08 000000077 INF: FPGA: Recv TDICLINES 1023 17-02-28 20:23:42.831 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:23:42.896 -08 000000104 INF: FPGA: Recv TDIYERD 1490821 17-02-28 20:23:42.896 -08 000000042 INF: FPGA: Xmit ZADCR\n 17-02-28 20:23:42.958 -08 000000010 INF: FPGA: Recv ZADCR 35609 17-02-28 20:23:42.958 -08 000000042 INF: At scan end Y pos = 14.908 and Z pos = -0.136. Y moved -48.539 mm 17-02-28 20:23:42.958 -08 000000042 INF: FPGA: Xmit TDIPULSES\n 17-02-28 20:23:43.020 -08 000000082 INF: FPGA: Recv TDIPULSES 139265 17-02-28 20:23:43.020 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264 17-02-28 20:23:43.020 -08 000000042 INF: TDIScan finished after 12209.7977 ms 17-02-28 20:23:43.020 -08 000000042 INF: Image[0]: Y should trigger at 63.447 mm, 2nd row was at 64.356 mm (error = 0.909 mm) 17-02-28 20:23:43.020 -08 000000042 INF: Image[2]: Y should trigger at 63.447 mm, 2nd row was at 64.356 mm (error = 0.909 mm) 17-02-28 20:23:43.022 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:43.054 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.589 um 17-02-28 20:23:43.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:43.055 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n 17-02-28 20:23:43.082 -08 000000023 INF: FPGA: Recv SWOOF_RDSTAT 0 17-02-28 20:23:43.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:43.083 -08 000000083 INF: ===================Dither Clean Up Command=================== 17-02-28 20:23:43.083 -08 000000050 INF: ===================Set YMotor gains for fast moves=================== 17-02-28 20:23:43.083 -08 000000074 INF: ===================Set Y Motor Motor Velocity=================== 17-02-28 20:23:43.083 -08 000000030 INF: ===================Set Z Motor Motor Velocity=================== 17-02-28 20:23:43.084 -08 000000030 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 17-02-28 20:23:43.084 -08 000000050 INF: ====================================== 17-02-28 20:23:43.084 -08 000000030 INF: FPGA: Xmit ZSTEP 1288471\n 17-02-28 20:23:43.084 -08 000000074 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec 17-02-28 20:23:43.084 -08 000000074 INF: Y Motor: Xmit s r0xcb 25000000\r 17-02-28 20:23:43.084 -08 000000046 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:23:43.084 -08 000000045 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:23:43.085 -08 000000046 INF: FPGA: Xmit ZSEL 0\n 17-02-28 20:23:43.087 -08 000000045 INF: ===================LFT:Extracting coords=================== 17-02-28 20:23:43.113 -08 000000045 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:23:43.114 -08 000000045 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 17-02-28 20:23:43.114 -08 000000101 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:43.114 -08 000000035 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:43.115 -08 000000085 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:43.115 -08 000000082 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:43.115 -08 000000101 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:23:43.115 -08 000000035 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:23:43.115 -08 000000085 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:23:43.115 -08 000000082 INF: ===================Lookup Focus Tracking=================== 17-02-28 20:23:43.144 -08 000000099 INF: FPGA: Recv ZSTEP 17-02-28 20:23:43.144 -08 000000099 INF: FPGA: Recv ZSEL 17-02-28 20:23:43.144 -08 000000046 INF: FPGA: Xmit ZDACW 41084\n 17-02-28 20:23:43.144 -08 000000030 INF: ====================================== 17-02-28 20:23:43.147 -08 000000074 INF: Y Motor: Recv ok\r 17-02-28 20:23:43.147 -08 000000074 INF: ====================================== 17-02-28 20:23:43.189 -08 000000101 INF: FC:B, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:23:43.189 -08 000000035 INF: FC:B, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:23:43.189 -08 000000085 INF: FC:B, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:23:43.196 -08 000000082 INF: FC:B, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines. 17-02-28 20:23:43.208 -08 000000010 INF: FPGA: Recv ZDACW 17-02-28 20:23:43.209 -08 000000046 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking=================== 17-02-28 20:23:43.209 -08 000000046 INF: FPGA: Xmit TDIBB 0\n 17-02-28 20:23:43.268 -08 000000109 INF: FPGA: Recv TDIBB 17-02-28 20:23:43.268 -08 000000046 INF: ===================DitherPostSwathFocusCleanup=================== 17-02-28 20:23:43.269 -08 000000046 INF: ====================================== 17-02-28 20:23:43.340 -08 000000101 INF: LFT found best fwhm score 2.000326 in 151 ms 17-02-28 20:23:43.340 -08 000000101 INF: LFT found good score at index 6305 with fwhm value 2.000326. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:4,T 17-02-28 20:23:43.340 -08 000000085 INF: LFT found best fwhm score 2.090536 in 151 ms 17-02-28 20:23:43.340 -08 000000085 INF: LFT found good score at index 2173 with fwhm value 2.090536. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:4,T 17-02-28 20:23:43.340 -08 000000035 INF: LFT found best fwhm score 2.000546 in 151 ms 17-02-28 20:23:43.340 -08 000000035 INF: LFT found good score at index 633 with fwhm value 2.000546. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:4,T 17-02-28 20:23:43.341 -08 000000101 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:43.341 -08 000000085 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:43.341 -08 000000035 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:43.341 -08 000000101 INF: ====================================== 17-02-28 20:23:43.341 -08 000000035 INF: ====================================== 17-02-28 20:23:43.341 -08 000000085 INF: ====================================== 17-02-28 20:23:43.364 -08 000000082 INF: LFT found best fwhm score 2.000114 in 168 ms 17-02-28 20:23:43.364 -08 000000082 INF: LFT found good score at index 6073 with fwhm value 2.000114. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:4,T 17-02-28 20:23:43.364 -08 000000082 INF: ===================LookupFocusTracking=================== 17-02-28 20:23:43.364 -08 000000082 INF: ====================================== 17-02-28 20:23:43.366 -08 000000045 INF: ===================LookupFocusTrackingCleanup=================== 17-02-28 20:23:43.367 -08 000000045 INF: LFT weighted average best Z for top surface is at -0.158mm FC:B, C:3,L:4,T 17-02-28 20:23:43.367 -08 000000045 INF: ====================================== 17-02-28 20:23:43.368 -08 000000083 INF: ====================================== 17-02-28 20:23:43.369 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:43.370 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)=================== 17-02-28 20:23:43.370 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:43.370 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)=================== 17-02-28 20:23:43.370 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:43.370 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)=================== 17-02-28 20:23:43.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:43.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)=================== 17-02-28 20:23:43.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:43.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308=================== 17-02-28 20:23:43.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308=================== 17-02-28 20:23:43.372 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Waiting for image analysis=================== 17-02-28 20:23:43.372 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)=================== 17-02-28 20:23:43.372 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Waiting for image analysis=================== 17-02-28 20:23:43.372 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308=================== 17-02-28 20:23:43.395 -08 000000042 INF: Waited 23 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 17-02-28 20:23:43.395 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4=================== 17-02-28 20:23:43.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308=================== 17-02-28 20:23:43.396 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:43.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308=================== 17-02-28 20:23:43.396 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer=================== 17-02-28 20:23:43.396 -08 000000042 INF: Transformed XStagePosition from 78.03464 mm to 78.0149724520743 mm. 17-02-28 20:23:43.408 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5565393554289 mm. 17-02-28 20:23:43.408 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3565393554289 mm. 17-02-28 20:23:43.408 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4472893554289 mm. 17-02-28 20:23:43.410 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:43.411 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Populating image tags=================== 17-02-28 20:23:43.411 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:43.411 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -156.7 um, section = D_1 17-02-28 20:23:43.414 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:23:43.415 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:23:43.446 -08 000000102 INF: ===================Move X,Y=================== 17-02-28 20:23:43.447 -08 000000102 INF: ===================Move X,Y, Parallel=================== 17-02-28 20:23:43.454 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":4,"Tile":1103,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF198","HCSMMF197","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.455 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:23:43.456 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 17-02-28 20:23:43.456 -08 000000051 INF: Z Motor: Entering MoveAbsStepped 17-02-28 20:23:43.456 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:23:43.458 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 17-02-28 20:23:43.458 -08 000000060 INF: ===================MoveEmissionFilters=================== 17-02-28 20:23:43.459 -08 000000076 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:43.492 -08 000000076 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:43.493 -08 000000077 INF: ===================Move X Motor without settling=================== 17-02-28 20:23:43.493 -08 000000077 INF: X Motor: Xmit PR VM\n 17-02-28 20:23:43.493 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:23:43.494 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:23:43.495 -08 000000076 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:23:43.495 -08 000000076 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:23:43.496 -08 000000089 INF: ===================Move Y Motor without settling=================== 17-02-28 20:23:43.496 -08 000000089 INF: Y Motor: Moving to 64.5565 mm @25.000 mm/sec, started at 14.9082 mm 17-02-28 20:23:43.496 -08 000000076 INF: FPGA: Xmit ZSEL 3\n 17-02-28 20:23:43.496 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:23:43.496 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:43.502 -08 000000099 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:23:43.503 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:23:43.504 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:23:43.504 -08 000000099 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 17-02-28 20:23:43.505 -08 000000038 INF: ===================Camera Arm TDI=================== 17-02-28 20:23:43.505 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:23:43.506 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 17-02-28 20:23:43.506 -08 000000038 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:23:43.507 -08 000000038 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:23:43.508 -08 000000046 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 17-02-28 20:23:43.508 -08 000000105 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 17-02-28 20:23:43.509 -08 000000046 INF: ====================================== 17-02-28 20:23:43.509 -08 000000105 INF: ====================================== 17-02-28 20:23:43.510 -08 000000058 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 17-02-28 20:23:43.511 -08 000000109 INF: ===================Move Emission Filter 12 to IntoPath=================== 17-02-28 20:23:43.511 -08 000000109 INF: Emission Filter 12: Remaining IntoPath 17-02-28 20:23:43.511 -08 000000058 INF: ====================================== 17-02-28 20:23:43.511 -08 000000109 INF: ====================================== 17-02-28 20:23:43.511 -08 000000105 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 17-02-28 20:23:43.512 -08 000000105 INF: ====================================== 17-02-28 20:23:43.512 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 17-02-28 20:23:43.513 -08 000000086 INF: ====================================== 17-02-28 20:23:43.517 -08 000000095 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 17-02-28 20:23:43.518 -08 000000095 INF: ====================================== 17-02-28 20:23:43.520 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 17-02-28 20:23:43.522 -08 000000062 INF: ====================================== 17-02-28 20:23:43.523 -08 000000062 INF: FPGA: Recv ZSEL 17-02-28 20:23:43.527 -08 000000076 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:23:43.527 -08 000000076 INF: FPGA: Xmit TDIBB 1\n 17-02-28 20:23:43.534 -08 000000077 INF: X Motor: Recv PR VM\r\n6144\r\n> 17-02-28 20:23:43.534 -08 000000077 INF: X Motor: Xmit PR VI\n 17-02-28 20:23:43.536 -08 000000083 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 17-02-28 20:23:43.537 -08 000000083 INF: ====================================== 17-02-28 20:23:43.537 -08 000000059 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 17-02-28 20:23:43.538 -08 000000059 INF: ====================================== 17-02-28 20:23:43.538 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 17-02-28 20:23:43.539 -08 000000052 INF: ====================================== 17-02-28 20:23:43.543 -08 000000099 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 17-02-28 20:23:43.545 -08 000000099 INF: ====================================== 17-02-28 20:23:43.546 -08 000000060 INF: ====================================== 17-02-28 20:23:43.582 -08 000000035 INF: FPGA: Recv TDIBB 17-02-28 20:23:43.583 -08 000000076 INF: ===================Initializing FPGA for ITF Focus=================== 17-02-28 20:23:43.584 -08 000000077 INF: X Motor: Recv PR VI\r\n410\r\n> 17-02-28 20:23:43.584 -08 000000077 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec 17-02-28 20:23:43.584 -08 000000077 INF: X Motor: Moving to 78.0150 mm @15.000 mm/sec, started at 76.9150 mm 17-02-28 20:23:43.584 -08 000000077 INF: X Motor: Xmit MA 7789\n 17-02-28 20:23:43.587 -08 000000076 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 17-02-28 20:23:43.587 -08 000000076 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:43.592 -08 000000076 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 17-02-28 20:23:43.592 -08 000000076 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format 17-02-28 20:23:43.592 -08 000000076 INF: FPGA: Xmit ZSTEP 1792263\n 17-02-28 20:23:43.616 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":4,"Tile":1107,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF252","HCSMMF282","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.621 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":4,"Tile":1102,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF234","HCSMMF176","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.622 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":4,"Tile":1105,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF193","HCSMMF276","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.630 -08 000000089 INF: Y Motor: Recv ok\r 17-02-28 20:23:43.630 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:23:43.630 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:43.633 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":4,"Tile":1109,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF268","HCSMMF253","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.634 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":4,"Tile":1104,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF246","HCSMMF283","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.635 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":4,"Tile":1106,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF214","HCSMMF225","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.635 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":4,"Tile":1111,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF257","HCSMMF226","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.636 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":4,"Tile":1114,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF184","HCSMMF243","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.638 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":4,"Tile":1110,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF263","HCSMMF219","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.639 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":4,"Tile":1115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF273","HCSMMF236","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.640 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":4,"Tile":1101,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF200","HCSMMF229","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.640 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":4,"Tile":1122,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF237","HCSMMF192","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.641 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":4,"Tile":1118,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF235","HCSMMF189","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.642 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":4,"Tile":1116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF248","HCSMMF251","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.642 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":4,"Tile":1113,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF182","HCSMMF241","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.644 -08 000000035 INF: FPGA: Recv ZSTEP 17-02-28 20:23:43.644 -08 000000076 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:43.646 -08 000000077 INF: X Motor: Recv MA 7789\r\n> 17-02-28 20:23:43.646 -08 000000077 INF: X Motor: WaitUntilStopped 60073 17-02-28 20:23:43.647 -08 000000076 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 17-02-28 20:23:43.647 -08 000000076 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:43.650 -08 000000076 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 17-02-28 20:23:43.650 -08 000000076 INF: Z Motor: Entering ArmAbsStepped 17-02-28 20:23:43.650 -08 000000076 INF: Z Motor: Arming to move to -0.1167 mm 17-02-28 20:23:43.650 -08 000000076 INF: FPGA: Xmit ZYT 6435654 4\n 17-02-28 20:23:43.650 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":4,"Tile":1108,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF272","HCSMMF190","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.652 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":4,"Tile":1123,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF247","HCSMMF180","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.653 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":4,"Tile":1124,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF267","HCSMMF285","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.660 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":4,"Tile":1112,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF277","HCSMMF258","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.671 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":4,"Tile":1121,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF230","HCSMMF261","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.673 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":4,"Tile":1120,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF218","HCSMMF280","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.676 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":4,"Tile":1128,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF239","HCSMMF213","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.682 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":4,"Tile":1125,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF224","HCSMMF240","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.692 -08 000000089 INF: Y Motor: Recv ok\r 17-02-28 20:23:43.692 -08 000000089 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:43.696 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":4,"Tile":1117,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF178","HCSMMF233","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.701 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":4,"Tile":1119,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF207","HCSMMF284","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.704 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":4,"Tile":1127,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF228","HCSMMF244","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.707 -08 000000010 INF: FPGA: Recv ZYT 17-02-28 20:23:43.708 -08 000000076 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490820 enc / 14.908 mm / ) = 6435654 enc / 64.357 mm 17-02-28 20:23:43.708 -08 000000076 INF: FPGA: Xmit ZARM 30598\n 17-02-28 20:23:43.708 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":4,"Tile":1126,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF211","HCSMMF286","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 17-02-28 20:23:43.714 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:43.720 -08 000000049 INF: ===================Saving Thumbnail Image Channel A=================== 17-02-28 20:23:43.746 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 17-02-28 20:23:43.754 -08 000000089 INF: Y Motor: Recv v 268435456\r 17-02-28 20:23:43.754 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x10000000), Bit28=Velocity window exceeded. 17-02-28 20:23:43.754 -08 000000089 INF: Y Motor: Set target position to 5955654 encoder counts 17-02-28 20:23:43.754 -08 000000089 INF: Y Motor: Xmit s r0xca 5955654\r 17-02-28 20:23:43.767 -08 000000037 INF: FPGA: Recv ZARM 17-02-28 20:23:43.767 -08 000000076 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.2261 ms 17-02-28 20:23:43.767 -08 000000076 INF: Z Motor: ArmAbsStepped took 116.9095 ms 17-02-28 20:23:43.767 -08 000000076 INF: ===================TDI Scan Setup, Serial=================== 17-02-28 20:23:43.769 -08 000000076 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:43.770 -08 000000076 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 17-02-28 20:23:43.771 -08 000000076 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:43.772 -08 000000076 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 17-02-28 20:23:43.772 -08 000000076 INF: ===================TDI Scan Setup=================== 17-02-28 20:23:43.774 -08 000000076 INF: ====================================== 17-02-28 20:23:43.799 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:43.799 -08 000000049 INF: ===================Saving Zprofile for Image Channel A=================== 17-02-28 20:23:43.818 -08 000000089 INF: Y Motor: Recv ok\r 17-02-28 20:23:43.818 -08 000000089 INF: Y Motor: Start the move command 17-02-28 20:23:43.818 -08 000000089 INF: Y Motor: Xmit t 1\r 17-02-28 20:23:43.832 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:43.835 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:43.841 -08 000000049 INF: ===================Saving Thumbnail Image Channel T=================== 17-02-28 20:23:43.880 -08 000000089 INF: Y Motor: Recv ok\r 17-02-28 20:23:43.880 -08 000000089 INF: Y Motor: WaitUntilStopped 61986 17-02-28 20:23:43.880 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:43.932 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:43.966 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:43.972 -08 000000049 INF: ===================Saving Thumbnail Image Channel C=================== 17-02-28 20:23:44.003 -08 000000089 INF: Y Motor: Unshifted Position: 1070627 17-02-28 20:23:44.020 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 17-02-28 20:23:44.053 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:44.078 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:44.084 -08 000000049 INF: ===================Saving Thumbnail Image Channel G=================== 17-02-28 20:23:44.092 -08 000000038 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:23:44.092 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:23:44.092 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:23:44.107 -08 000000038 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:23:44.109 -08 000000038 INF: ===================Camera Arm TDI, Serial, Camera TDI=================== 17-02-28 20:23:44.174 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing=================== 17-02-28 20:23:44.179 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:44.270 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 17-02-28 20:23:44.271 -08 000000077 INF: X Motor: Xmit PR ER\n 17-02-28 20:23:44.317 -08 000000089 INF: Y Motor: Unshifted Position: 1779989 17-02-28 20:23:44.331 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 17-02-28 20:23:44.331 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:44.331 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 17-02-28 20:23:44.332 -08 000000077 INF: X Motor: Recv PR ER\r\n0\r\n> 17-02-28 20:23:44.332 -08 000000077 INF: X Motor: Moved to 78.0161 after 686 ms 17-02-28 20:23:44.332 -08 000000077 INF: ====================================== 17-02-28 20:23:44.367 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:44.458 -08 000000049 INF: ===================Image Analysis Flow Cell B 01=================== 17-02-28 20:23:44.490 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:44.629 -08 000000089 INF: Y Motor: Unshifted Position: 2560008 17-02-28 20:23:44.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:44.645 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:44.645 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:44.646 -08 000000018 INF: WaitCommand(40000) start 17-02-28 20:23:44.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 40 of 40 seconds left=================== 17-02-28 20:23:44.679 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:44.705 -08 000000038 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400, 17-02-28 20:23:44.705 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264 17-02-28 20:23:44.705 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64) 17-02-28 20:23:44.720 -08 000000038 INF: ===================Camera Arm TDI, Serial=================== 17-02-28 20:23:44.722 -08 000000038 INF: ===================Camera Arm TDI=================== 17-02-28 20:23:44.723 -08 000000038 INF: ====================================== 17-02-28 20:23:44.724 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 17-02-28 20:23:44.725 -08 000000051 INF: ====================================== 17-02-28 20:23:44.802 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:44.940 -08 000000089 INF: Y Motor: Unshifted Position: 3338282 17-02-28 20:23:44.990 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:45.116 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:45.251 -08 000000089 INF: Y Motor: Unshifted Position: 4116691 17-02-28 20:23:45.301 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:45.427 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:45.565 -08 000000089 INF: Y Motor: Unshifted Position: 4901646 17-02-28 20:23:45.615 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:45.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:45.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 39 of 40 seconds left=================== 17-02-28 20:23:45.738 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:45.876 -08 000000089 INF: Y Motor: Unshifted Position: 5677914 17-02-28 20:23:45.926 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:46.052 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:46.187 -08 000000089 INF: Y Motor: Unshifted Position: 5955655 17-02-28 20:23:46.187 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus 17-02-28 20:23:46.187 -08 000000089 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:46.252 -08 000000089 INF: Y Motor: Recv v 0\r 17-02-28 20:23:46.252 -08 000000089 INF: Y Motor: Moved to 64.5566 after 2372 ms 17-02-28 20:23:46.252 -08 000000089 INF: Y Motor: Xmit g r0xc9\r 17-02-28 20:23:46.314 -08 000000089 INF: Y Motor: Recv v 4096\r 17-02-28 20:23:46.314 -08 000000089 INF: Y Motor: Status After move finished OK: 17-02-28 20:23:46.314 -08 000000089 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:46.376 -08 000000089 INF: Y Motor: Recv v 0\r 17-02-28 20:23:46.376 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:46.376 -08 000000089 INF: Y Motor: Xmit g r0xa1\r 17-02-28 20:23:46.440 -08 000000089 INF: Y Motor: Recv v 402653184\r 17-02-28 20:23:46.440 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded. 17-02-28 20:23:46.440 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK 17-02-28 20:23:46.440 -08 000000089 INF: Y Motor: Xmit g r0xa4\r 17-02-28 20:23:46.501 -08 000000089 INF: Y Motor: Recv v 0\r 17-02-28 20:23:46.501 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000) 17-02-28 20:23:46.501 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status 17-02-28 20:23:46.501 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:46.563 -08 000000089 INF: Y Motor: Recv ok\r 17-02-28 20:23:46.563 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK 17-02-28 20:23:46.563 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:46.627 -08 000000089 INF: Y Motor: Recv ok\r 17-02-28 20:23:46.627 -08 000000089 INF: ====================================== 17-02-28 20:23:46.629 -08 000000102 INF: ===================Move X,Y=================== 17-02-28 20:23:46.630 -08 000000102 INF: ====================================== 17-02-28 20:23:46.631 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors=================== 17-02-28 20:23:46.631 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:46.632 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec 17-02-28 20:23:46.632 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r 17-02-28 20:23:46.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:46.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 38 of 40 seconds left=================== 17-02-28 20:23:46.689 -08 000000042 INF: Y Motor: Recv ok\r 17-02-28 20:23:46.689 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n 17-02-28 20:23:46.703 -08 000000082 INF: FPGA: Recv ZFREQCL 17-02-28 20:23:46.703 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions=================== 17-02-28 20:23:46.703 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:46.703 -08 000000042 INF: FPGA: Xmit TDIYERD\n 17-02-28 20:23:46.764 -08 000000062 INF: FPGA: Recv TDIYERD 6455655 17-02-28 20:23:46.764 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455655 counts (64.557 mm) 17-02-28 20:23:46.765 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:23:46.765 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:23:46.766 -08 000000091 INF: ===================TDI FPGA Arm=================== 17-02-28 20:23:46.766 -08 000000108 INF: ===================Set YMotor gains for scans=================== 17-02-28 20:23:46.766 -08 000000108 INF: ====================================== 17-02-28 20:23:46.766 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:23:46.767 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 17-02-28 20:23:46.767 -08 000000091 INF: FPGA: Xmit TDIYPOS 6344729\n 17-02-28 20:23:46.835 -08 000000036 INF: FPGA: Recv TDIYPOS 17-02-28 20:23:46.837 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:23:46.838 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 17-02-28 20:23:46.838 -08 000000091 INF: FPGA: Xmit TDIYARM3 139264 6435654 1 1\n 17-02-28 20:23:46.889 -08 000000010 INF: FPGA: Recv TDIYARM3 17-02-28 20:23:46.889 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA=================== 17-02-28 20:23:46.890 -08 000000091 INF: ===================TDI FPGA Arm=================== 17-02-28 20:23:46.891 -08 000000091 INF: ====================================== 17-02-28 20:23:46.892 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 17-02-28 20:23:46.893 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C=================== 17-02-28 20:23:46.893 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:46.894 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:46.894 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:46.895 -08 000000090 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 17-02-28 20:23:46.895 -08 000000090 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 17-02-28 20:23:46.895 -08 000000090 INF: Excitation Filter 2: Moving to 225.0000 degrees 17-02-28 20:23:46.895 -08 000000090 INF: Excitation Filter 2: Moving -107 steps 17-02-28 20:23:46.895 -08 000000090 INF: FPGA: Xmit EX2MV -107\n 17-02-28 20:23:46.896 -08 000000036 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'=================== 17-02-28 20:23:46.896 -08 000000036 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2) 17-02-28 20:23:46.896 -08 000000036 INF: Excitation Filter 1: Moving to 225.0000 degrees 17-02-28 20:23:46.896 -08 000000036 INF: Excitation Filter 1: Moving -107 steps 17-02-28 20:23:46.897 -08 000000036 INF: FPGA: Xmit EX1MV -107\n 17-02-28 20:23:47.265 -08 000000083 INF: FPGA: Recv EX2MV 17-02-28 20:23:47.265 -08 000000083 INF: FPGA: Recv EX1MV 17-02-28 20:23:47.265 -08 000000036 INF: Excitation Filter 1: Moved -107 steps in 369.0744 ms 17-02-28 20:23:47.265 -08 000000090 INF: Excitation Filter 2: Moved -107 steps in 369.6637 ms 17-02-28 20:23:47.265 -08 000000036 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.2774 ms 17-02-28 20:23:47.265 -08 000000090 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.807 ms 17-02-28 20:23:47.265 -08 000000036 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.3572 ms 17-02-28 20:23:47.265 -08 000000090 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.9211 ms 17-02-28 20:23:47.266 -08 000000036 INF: ====================================== 17-02-28 20:23:47.266 -08 000000090 INF: ====================================== 17-02-28 20:23:47.267 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:47.268 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning=================== 17-02-28 20:23:47.269 -08 000000102 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:23:47.269 -08 000000077 INF: ===================FPGA Z Wait=================== 17-02-28 20:23:47.269 -08 000000074 INF: ===================Move Y Motor without settling=================== 17-02-28 20:23:47.269 -08 000000051 INF: ===================Camera TDI=================== 17-02-28 20:23:47.269 -08 000000077 INF: FPGA: Xmit ZWAIT\n 17-02-28 20:23:47.269 -08 000000074 INF: Y Motor: Moving to 14.9082 mm @6.500 mm/sec, started at 64.5566 mm 17-02-28 20:23:47.269 -08 000000074 INF: Y Motor: Before move, after clearing latch: Clear latched fault status 17-02-28 20:23:47.269 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r 17-02-28 20:23:47.269 -08 000000102 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 17-02-28 20:23:47.270 -08 000000102 INF: FPGA: Xmit TDIYWAIT\n 17-02-28 20:23:47.270 -08 000000051 INF: ===================Camera TDI, Parallel=================== 17-02-28 20:23:47.271 -08 000000076 INF: ===================Camera TDI=================== 17-02-28 20:23:47.271 -08 000000050 INF: ===================Camera TDI=================== 17-02-28 20:23:47.272 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:47.272 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:47.275 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:47.275 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:47.313 -08 000000074 INF: Y Motor: Recv ok\r 17-02-28 20:23:47.313 -08 000000074 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch 17-02-28 20:23:47.313 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r 17-02-28 20:23:47.375 -08 000000074 INF: Y Motor: Recv ok\r 17-02-28 20:23:47.375 -08 000000074 INF: Y Motor: Xmit g r0xa0\r 17-02-28 20:23:47.422 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:47.422 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:47.425 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:47.425 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:47.436 -08 000000074 INF: Y Motor: Recv v 0\r 17-02-28 20:23:47.436 -08 000000074 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000) 17-02-28 20:23:47.436 -08 000000074 INF: Y Motor: Set target position to 990820 encoder counts 17-02-28 20:23:47.436 -08 000000074 INF: Y Motor: Xmit s r0xca 990820\r 17-02-28 20:23:47.501 -08 000000074 INF: Y Motor: Recv ok\r 17-02-28 20:23:47.501 -08 000000074 INF: Y Motor: Start the move command 17-02-28 20:23:47.501 -08 000000074 INF: Y Motor: Xmit t 1\r 17-02-28 20:23:47.563 -08 000000074 INF: Y Motor: Recv ok\r 17-02-28 20:23:47.563 -08 000000074 INF: Y Motor: WaitUntilStopped 67638 17-02-28 20:23:47.563 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:47.572 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:47.572 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:47.575 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0. 17-02-28 20:23:47.575 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0 17-02-28 20:23:47.642 -08 000000083 INF: FPGA: Recv ZWAIT 17-02-28 20:23:47.642 -08 000000077 INF: ====================================== 17-02-28 20:23:47.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:47.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 37 of 40 seconds left=================== 17-02-28 20:23:47.686 -08 000000074 INF: Y Motor: Unshifted Position: 5895323 17-02-28 20:23:47.722 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:23:47.722 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:23:47.722 -08 000000076 INF: ===================Camera #0 Frame #5=================== 17-02-28 20:23:47.725 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5. 17-02-28 20:23:47.725 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5 17-02-28 20:23:47.725 -08 000000050 INF: ===================Camera #2 Frame #5=================== 17-02-28 20:23:47.736 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:47.862 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:47.888 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-02-28 20:23:47.888 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-02-28 20:23:47.888 -08 000000076 INF: ===================Camera #0 Frame #11=================== 17-02-28 20:23:47.891 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11. 17-02-28 20:23:47.891 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11 17-02-28 20:23:47.891 -08 000000050 INF: ===================Camera #2 Frame #11=================== 17-02-28 20:23:47.998 -08 000000074 INF: Y Motor: Unshifted Position: 5691001 17-02-28 20:23:48.048 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:48.061 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18. 17-02-28 20:23:48.061 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18 17-02-28 20:23:48.061 -08 000000076 INF: ===================Camera #0 Frame #18=================== 17-02-28 20:23:48.069 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18. 17-02-28 20:23:48.069 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18 17-02-28 20:23:48.069 -08 000000050 INF: ===================Camera #2 Frame #18=================== 17-02-28 20:23:48.174 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:48.232 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24. 17-02-28 20:23:48.232 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24 17-02-28 20:23:48.232 -08 000000076 INF: ===================Camera #0 Frame #24=================== 17-02-28 20:23:48.241 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24. 17-02-28 20:23:48.241 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24 17-02-28 20:23:48.241 -08 000000050 INF: ===================Camera #2 Frame #24=================== 17-02-28 20:23:48.310 -08 000000074 INF: Y Motor: Unshifted Position: 5487988 17-02-28 20:23:48.360 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:48.408 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30. 17-02-28 20:23:48.408 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30 17-02-28 20:23:48.408 -08 000000076 INF: ===================Camera #0 Frame #30=================== 17-02-28 20:23:48.419 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31. 17-02-28 20:23:48.419 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31 17-02-28 20:23:48.419 -08 000000050 INF: ===================Camera #2 Frame #31=================== 17-02-28 20:23:48.486 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:48.576 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37. 17-02-28 20:23:48.576 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37 17-02-28 20:23:48.576 -08 000000076 INF: ===================Camera #0 Frame #37=================== 17-02-28 20:23:48.596 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37. 17-02-28 20:23:48.596 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37 17-02-28 20:23:48.596 -08 000000050 INF: ===================Camera #2 Frame #37=================== 17-02-28 20:23:48.623 -08 000000074 INF: Y Motor: Unshifted Position: 5286488 17-02-28 20:23:48.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:48.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 36 of 40 seconds left=================== 17-02-28 20:23:48.673 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:48.747 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43. 17-02-28 20:23:48.747 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43 17-02-28 20:23:48.747 -08 000000076 INF: ===================Camera #0 Frame #43=================== 17-02-28 20:23:48.775 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44. 17-02-28 20:23:48.775 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44 17-02-28 20:23:48.775 -08 000000050 INF: ===================Camera #2 Frame #44=================== 17-02-28 20:23:48.796 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:48.915 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49. 17-02-28 20:23:48.915 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49 17-02-28 20:23:48.915 -08 000000076 INF: ===================Camera #0 Frame #49=================== 17-02-28 20:23:48.935 -08 000000074 INF: Y Motor: Unshifted Position: 5083680 17-02-28 20:23:48.959 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51. 17-02-28 20:23:48.959 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51 17-02-28 20:23:48.959 -08 000000050 INF: ===================Camera #2 Frame #51=================== 17-02-28 20:23:48.985 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:49.091 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56. 17-02-28 20:23:49.091 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56 17-02-28 20:23:49.091 -08 000000076 INF: ===================Camera #0 Frame #56=================== 17-02-28 20:23:49.108 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:49.141 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57. 17-02-28 20:23:49.141 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57 17-02-28 20:23:49.141 -08 000000050 INF: ===================Camera #2 Frame #57=================== 17-02-28 20:23:49.247 -08 000000074 INF: Y Motor: Unshifted Position: 4880669 17-02-28 20:23:49.272 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62. 17-02-28 20:23:49.272 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62 17-02-28 20:23:49.272 -08 000000076 INF: ===================Camera #0 Frame #62=================== 17-02-28 20:23:49.297 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:49.320 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64. 17-02-28 20:23:49.320 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64 17-02-28 20:23:49.320 -08 000000050 INF: ===================Camera #2 Frame #64=================== 17-02-28 20:23:49.420 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:49.440 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68. 17-02-28 20:23:49.440 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68 17-02-28 20:23:49.440 -08 000000076 INF: ===================Camera #0 Frame #68=================== 17-02-28 20:23:49.503 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 70, frameCount = 71. 17-02-28 20:23:49.503 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 71 17-02-28 20:23:49.503 -08 000000050 INF: ===================Camera #2 Frame #71=================== 17-02-28 20:23:49.560 -08 000000074 INF: Y Motor: Unshifted Position: 4677870 17-02-28 20:23:49.610 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:49.616 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75. 17-02-28 20:23:49.616 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75 17-02-28 20:23:49.616 -08 000000076 INF: ===================Camera #0 Frame #75=================== 17-02-28 20:23:49.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:49.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 35 of 40 seconds left=================== 17-02-28 20:23:49.687 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77. 17-02-28 20:23:49.687 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77 17-02-28 20:23:49.687 -08 000000050 INF: ===================Camera #2 Frame #77=================== 17-02-28 20:23:49.733 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:49.796 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81. 17-02-28 20:23:49.796 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81 17-02-28 20:23:49.796 -08 000000076 INF: ===================Camera #0 Frame #81=================== 17-02-28 20:23:49.865 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 83, frameCount = 84. 17-02-28 20:23:49.865 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 84 17-02-28 20:23:49.865 -08 000000050 INF: ===================Camera #2 Frame #84=================== 17-02-28 20:23:49.872 -08 000000074 INF: Y Motor: Unshifted Position: 4474186 17-02-28 20:23:49.922 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:49.966 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88. 17-02-28 20:23:49.966 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88 17-02-28 20:23:49.966 -08 000000076 INF: ===================Camera #0 Frame #88=================== 17-02-28 20:23:50.045 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:50.048 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91. 17-02-28 20:23:50.048 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91 17-02-28 20:23:50.048 -08 000000050 INF: ===================Camera #2 Frame #91=================== 17-02-28 20:23:50.138 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94. 17-02-28 20:23:50.138 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94 17-02-28 20:23:50.138 -08 000000076 INF: ===================Camera #0 Frame #94=================== 17-02-28 20:23:50.184 -08 000000074 INF: Y Motor: Unshifted Position: 4271390 17-02-28 20:23:50.221 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 96, frameCount = 97. 17-02-28 20:23:50.221 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 97 17-02-28 20:23:50.221 -08 000000050 INF: ===================Camera #2 Frame #97=================== 17-02-28 20:23:50.234 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:50.307 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100. 17-02-28 20:23:50.307 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100 17-02-28 20:23:50.307 -08 000000076 INF: ===================Camera #0 Frame #100=================== 17-02-28 20:23:50.357 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:50.391 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 102, frameCount = 103. 17-02-28 20:23:50.391 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 103 17-02-28 20:23:50.391 -08 000000050 INF: ===================Camera #2 Frame #103=================== 17-02-28 20:23:50.475 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106. 17-02-28 20:23:50.475 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106 17-02-28 20:23:50.475 -08 000000076 INF: ===================Camera #0 Frame #106=================== 17-02-28 20:23:50.496 -08 000000074 INF: Y Motor: Unshifted Position: 4068370 17-02-28 20:23:50.546 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:50.560 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110. 17-02-28 20:23:50.560 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110 17-02-28 20:23:50.560 -08 000000050 INF: ===================Camera #2 Frame #110=================== 17-02-28 20:23:50.643 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113. 17-02-28 20:23:50.643 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113 17-02-28 20:23:50.643 -08 000000076 INF: ===================Camera #0 Frame #113=================== 17-02-28 20:23:50.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:50.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 34 of 40 seconds left=================== 17-02-28 20:23:50.668 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:50.732 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 115, frameCount = 116. 17-02-28 20:23:50.732 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 116 17-02-28 20:23:50.732 -08 000000050 INF: ===================Camera #2 Frame #116=================== 17-02-28 20:23:50.807 -08 000000074 INF: Y Motor: Unshifted Position: 3866223 17-02-28 20:23:50.815 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119. 17-02-28 20:23:50.815 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119 17-02-28 20:23:50.815 -08 000000076 INF: ===================Camera #0 Frame #119=================== 17-02-28 20:23:50.857 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:50.902 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 121, frameCount = 122. 17-02-28 20:23:50.902 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 122 17-02-28 20:23:50.902 -08 000000050 INF: ===================Camera #2 Frame #122=================== 17-02-28 20:23:50.980 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:50.983 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125. 17-02-28 20:23:50.983 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125 17-02-28 20:23:50.983 -08 000000076 INF: ===================Camera #0 Frame #125=================== 17-02-28 20:23:51.071 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 127, frameCount = 128. 17-02-28 20:23:51.071 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 128 17-02-28 20:23:51.071 -08 000000050 INF: ===================Camera #2 Frame #128=================== 17-02-28 20:23:51.119 -08 000000074 INF: Y Motor: Unshifted Position: 3663201 17-02-28 20:23:51.152 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131. 17-02-28 20:23:51.152 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131 17-02-28 20:23:51.152 -08 000000076 INF: ===================Camera #0 Frame #131=================== 17-02-28 20:23:51.169 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:51.240 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135. 17-02-28 20:23:51.240 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135 17-02-28 20:23:51.240 -08 000000050 INF: ===================Camera #2 Frame #135=================== 17-02-28 20:23:51.292 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:51.321 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138. 17-02-28 20:23:51.321 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138 17-02-28 20:23:51.321 -08 000000076 INF: ===================Camera #0 Frame #138=================== 17-02-28 20:23:51.412 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 140, frameCount = 141. 17-02-28 20:23:51.412 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 141 17-02-28 20:23:51.412 -08 000000050 INF: ===================Camera #2 Frame #141=================== 17-02-28 20:23:51.431 -08 000000074 INF: Y Motor: Unshifted Position: 3460409 17-02-28 20:23:51.481 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:51.492 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144. 17-02-28 20:23:51.492 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144 17-02-28 20:23:51.492 -08 000000076 INF: ===================Camera #0 Frame #144=================== 17-02-28 20:23:51.582 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 146, frameCount = 147. 17-02-28 20:23:51.582 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 147 17-02-28 20:23:51.582 -08 000000050 INF: ===================Camera #2 Frame #147=================== 17-02-28 20:23:51.604 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:51.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:51.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 33 of 40 seconds left=================== 17-02-28 20:23:51.660 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150. 17-02-28 20:23:51.660 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150 17-02-28 20:23:51.660 -08 000000076 INF: ===================Camera #0 Frame #150=================== 17-02-28 20:23:51.744 -08 000000074 INF: Y Motor: Unshifted Position: 3256742 17-02-28 20:23:51.751 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 152, frameCount = 153. 17-02-28 20:23:51.751 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 153 17-02-28 20:23:51.751 -08 000000050 INF: ===================Camera #2 Frame #153=================== 17-02-28 20:23:51.794 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:51.829 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156. 17-02-28 20:23:51.829 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156 17-02-28 20:23:51.829 -08 000000076 INF: ===================Camera #0 Frame #156=================== 17-02-28 20:23:51.917 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:51.920 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160. 17-02-28 20:23:51.920 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160 17-02-28 20:23:51.920 -08 000000050 INF: ===================Camera #2 Frame #160=================== 17-02-28 20:23:51.997 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162. 17-02-28 20:23:51.997 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163 17-02-28 20:23:51.997 -08 000000076 INF: ===================Camera #0 Frame #163=================== 17-02-28 20:23:52.056 -08 000000074 INF: Y Motor: Unshifted Position: 3053944 17-02-28 20:23:52.092 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 165, frameCount = 166. 17-02-28 20:23:52.092 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 166 17-02-28 20:23:52.092 -08 000000050 INF: ===================Camera #2 Frame #166=================== 17-02-28 20:23:52.106 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:52.168 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169. 17-02-28 20:23:52.168 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169 17-02-28 20:23:52.168 -08 000000076 INF: ===================Camera #0 Frame #169=================== 17-02-28 20:23:52.229 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:52.261 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 171, frameCount = 172. 17-02-28 20:23:52.261 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 172 17-02-28 20:23:52.261 -08 000000050 INF: ===================Camera #2 Frame #172=================== 17-02-28 20:23:52.336 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175. 17-02-28 20:23:52.336 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175 17-02-28 20:23:52.336 -08 000000076 INF: ===================Camera #0 Frame #175=================== 17-02-28 20:23:52.365 -08 000000074 INF: Y Motor: Unshifted Position: 2850933 17-02-28 20:23:52.415 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:52.430 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 177, frameCount = 178. 17-02-28 20:23:52.430 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 178 17-02-28 20:23:52.430 -08 000000050 INF: ===================Camera #2 Frame #178=================== 17-02-28 20:23:52.504 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181. 17-02-28 20:23:52.504 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181 17-02-28 20:23:52.504 -08 000000076 INF: ===================Camera #0 Frame #181=================== 17-02-28 20:23:52.541 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:52.599 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 184, frameCount = 185. 17-02-28 20:23:52.599 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 185 17-02-28 20:23:52.599 -08 000000050 INF: ===================Camera #2 Frame #185=================== 17-02-28 20:23:52.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:52.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 32 of 40 seconds left=================== 17-02-28 20:23:52.673 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187. 17-02-28 20:23:52.673 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187 17-02-28 20:23:52.673 -08 000000076 INF: ===================Camera #0 Frame #187=================== 17-02-28 20:23:52.679 -08 000000074 INF: Y Motor: Unshifted Position: 2648785 17-02-28 20:23:52.729 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:52.771 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 190, frameCount = 191. 17-02-28 20:23:52.771 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 191 17-02-28 20:23:52.771 -08 000000050 INF: ===================Camera #2 Frame #191=================== 17-02-28 20:23:52.841 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194. 17-02-28 20:23:52.841 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194 17-02-28 20:23:52.841 -08 000000076 INF: ===================Camera #0 Frame #194=================== 17-02-28 20:23:52.852 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:52.940 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 196, frameCount = 197. 17-02-28 20:23:52.940 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 197 17-02-28 20:23:52.940 -08 000000050 INF: ===================Camera #2 Frame #197=================== 17-02-28 20:23:52.991 -08 000000074 INF: Y Motor: Unshifted Position: 2445768 17-02-28 20:23:53.012 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200. 17-02-28 20:23:53.012 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200 17-02-28 20:23:53.012 -08 000000076 INF: ===================Camera #0 Frame #200=================== 17-02-28 20:23:53.041 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:53.109 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 202, frameCount = 203. 17-02-28 20:23:53.109 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 203 17-02-28 20:23:53.109 -08 000000050 INF: ===================Camera #2 Frame #203=================== 17-02-28 20:23:53.164 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:53.180 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206. 17-02-28 20:23:53.180 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206 17-02-28 20:23:53.180 -08 000000076 INF: ===================Camera #0 Frame #206=================== 17-02-28 20:23:53.278 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210. 17-02-28 20:23:53.278 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210 17-02-28 20:23:53.278 -08 000000050 INF: ===================Camera #2 Frame #210=================== 17-02-28 20:23:53.303 -08 000000074 INF: Y Motor: Unshifted Position: 2242972 17-02-28 20:23:53.348 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212. 17-02-28 20:23:53.348 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212 17-02-28 20:23:53.348 -08 000000076 INF: ===================Camera #0 Frame #212=================== 17-02-28 20:23:53.353 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:53.450 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 215, frameCount = 216. 17-02-28 20:23:53.450 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 216 17-02-28 20:23:53.450 -08 000000050 INF: ===================Camera #2 Frame #216=================== 17-02-28 20:23:53.476 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:53.516 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218. 17-02-28 20:23:53.516 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218 17-02-28 20:23:53.516 -08 000000076 INF: ===================Camera #0 Frame #218=================== 17-02-28 20:23:53.613 -08 000000074 INF: Y Motor: Unshifted Position: 2039956 17-02-28 20:23:53.619 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 221, frameCount = 222. 17-02-28 20:23:53.619 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 222 17-02-28 20:23:53.619 -08 000000050 INF: ===================Camera #2 Frame #222=================== 17-02-28 20:23:53.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:53.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 31 of 40 seconds left=================== 17-02-28 20:23:53.663 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:53.684 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225. 17-02-28 20:23:53.684 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225 17-02-28 20:23:53.684 -08 000000076 INF: ===================Camera #0 Frame #225=================== 17-02-28 20:23:53.787 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228. 17-02-28 20:23:53.787 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228 17-02-28 20:23:53.787 -08 000000050 INF: ===================Camera #2 Frame #228=================== 17-02-28 20:23:53.789 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:53.855 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231. 17-02-28 20:23:53.855 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231 17-02-28 20:23:53.855 -08 000000076 INF: ===================Camera #0 Frame #231=================== 17-02-28 20:23:53.925 -08 000000074 INF: Y Motor: Unshifted Position: 1836503 17-02-28 20:23:53.956 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 234, frameCount = 235. 17-02-28 20:23:53.956 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 235 17-02-28 20:23:53.956 -08 000000050 INF: ===================Camera #2 Frame #235=================== 17-02-28 20:23:53.975 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:54.023 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237. 17-02-28 20:23:54.023 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237 17-02-28 20:23:54.023 -08 000000076 INF: ===================Camera #0 Frame #237=================== 17-02-28 20:23:54.101 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:54.128 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 240, frameCount = 241. 17-02-28 20:23:54.128 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 241 17-02-28 20:23:54.128 -08 000000050 INF: ===================Camera #2 Frame #241=================== 17-02-28 20:23:54.191 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243. 17-02-28 20:23:54.191 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243 17-02-28 20:23:54.191 -08 000000076 INF: ===================Camera #0 Frame #243=================== 17-02-28 20:23:54.237 -08 000000074 INF: Y Motor: Unshifted Position: 1633481 17-02-28 20:23:54.287 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:54.297 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247. 17-02-28 20:23:54.297 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247 17-02-28 20:23:54.297 -08 000000050 INF: ===================Camera #2 Frame #247=================== 17-02-28 20:23:54.359 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249. 17-02-28 20:23:54.359 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249 17-02-28 20:23:54.359 -08 000000076 INF: ===================Camera #0 Frame #249=================== 17-02-28 20:23:54.413 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:54.466 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253. 17-02-28 20:23:54.466 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253 17-02-28 20:23:54.466 -08 000000050 INF: ===================Camera #2 Frame #253=================== 17-02-28 20:23:54.528 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256. 17-02-28 20:23:54.528 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256 17-02-28 20:23:54.528 -08 000000076 INF: ===================Camera #0 Frame #256=================== 17-02-28 20:23:54.549 -08 000000074 INF: Y Motor: Unshifted Position: 1430465 17-02-28 20:23:54.599 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:54.635 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 259, frameCount = 260. 17-02-28 20:23:54.635 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 260 17-02-28 20:23:54.635 -08 000000050 INF: ===================Camera #2 Frame #260=================== 17-02-28 20:23:54.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation=================== 17-02-28 20:23:54.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 30 of 40 seconds left=================== 17-02-28 20:23:54.701 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262. 17-02-28 20:23:54.701 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262 17-02-28 20:23:54.701 -08 000000076 INF: ===================Camera #0 Frame #262=================== 17-02-28 20:23:54.724 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:54.807 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266. 17-02-28 20:23:54.807 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266 17-02-28 20:23:54.807 -08 000000050 INF: ===================Camera #2 Frame #266=================== 17-02-28 20:23:54.863 -08 000000074 INF: Y Motor: Unshifted Position: 1228301 17-02-28 20:23:54.871 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268. 17-02-28 20:23:54.871 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268 17-02-28 20:23:54.871 -08 000000076 INF: ===================Camera #0 Frame #268=================== 17-02-28 20:23:54.913 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving 17-02-28 20:23:54.976 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272. 17-02-28 20:23:54.976 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272 17-02-28 20:23:54.976 -08 000000050 INF: ===================Camera #2 Frame #272=================== 17-02-28 20:23:54.995 -08 000000050 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames. 17-02-28 20:23:54.996 -08 000000050 INF: ===================CameraTDI Cleanup=================== 17-02-28 20:23:55.003 -08 000000072 INF: FPGA: Recv TDIYWAIT 17-02-28 20:23:55.003 -08 000000102 INF: ===================Wait for frames then close excitation filters=================== 17-02-28 20:23:55.004 -08 000000102 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 17-02-28 20:23:55.005 -08 000000066 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 17-02-28 20:23:55.005 -08 000000010 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 17-02-28 20:23:55.005 -08 000000066 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 17-02-28 20:23:55.006 -08 000000066 INF: Excitation Filter 1: Moving to 0.0000 degrees 17-02-28 20:23:55.006 -08 000000066 INF: Excitation Filter 1: Moving 107 steps 17-02-28 20:23:55.006 -08 000000066 INF: FPGA: Xmit EX1MV 107\n 17-02-28 20:23:55.006 -08 000000010 INF: Excitation Filt